CmoCh06G004880 (gene) Cucurbita moschata (Rifu)

NameCmoCh06G004880
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionPentatricopeptide repeat superfamily protein
LocationCmo_Chr06 : 2358797 .. 2360698 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTGAAATCCAAAAGCCAAATCATTTTCATCAACAATGGAAAGCTTCGATTTTCCTCCGCTTCAGCAACGACTGCAGTGAAAGAAGCTTCTATTTCTGTGCAGTTCAATGTGAATAACCACTCAAATGAACCAAATTCCTCAACCCAAGAATCTCAATCTTCTTTCCTTCTCTATTTTCACCCCAAACGATTTATAACTTTGCTTTTGAGTTGCAGAAATCTCTTTCAAATTAGGCAAGTCCATGGCCATATTGCTTCCAGTGGCGCATTTAGAAACCTCGCGATTGCTAACAAACTTCTCTTCTTATACGCCCAATATGGCGCCTTGGAGGATGCTCATGAACTGTTTGATGAAATGACTGAGAGAGATTCTTATAGCTGGAGTGTAATAGTTGGTGGGTATGCCAAAGTTAAGGATTTTTCTTCTTGTTTTTGGATGTTTAGGGAGCTTGTTCGTTGTGGGATGCCATTGGATAACTATACATTGCCAATTGTTATAAGGGCCTGCAGAGATTTGAAGGACCTGCAATTTGGTAGGGTTATTCATTGTGCCACTTCGAAATGTGGGCTGGATTTTGATCATTTTGTTTGTGCATCTCTTGTTGATATGTATGCTAGGTGTAAAGTGATTGAGGATGCCCGCCAACTGTTTGATAAAATGCCAAGGAGAGATCTTGTGACATGGACAGTGATGGTTGGTGCCTTGGCTGAATGTAGCAGTGCTGTTGAGTCATTGACTTTGTTTGATAGGATGAGGGATGAAGGTATTGTCCCTGATAAAGTGGCGTTGGTGACTGTTGTTTATGCCTGCGCAAAGTTGGGCGCCATGAATAAGGCCAGGGCAATTCATGACTATATTAATGGAACCAGATATGTTTTGGATGTAATTTTAGGGACAGCAATGATCGATATGTATGCGAAATGTGGGAGTGTTGATTTGGCAAGGGAGATTTTTGATCAGATGCAAGTGAAGAATGTGATTACATGGAGTGCCATGATTGCAGCCTATGGATATCACGGACAAGGCGGGAAAGCGCTCGAGTTATTCCCAATGATGTTAAGCAGCGGAATATTGCCAAATCGGATCACGTTTGTCTCGTTGTTGTATGCTTGTAGTCATGCTGGTCTAATTGAAGAGGGCCAGAGATTTTTTGCCTCAATGTGGGATGAGTACGGTGTAAGACCGGATGTAAAACACTATACTTGCATGGTTGATCTCCTAGGTCGAGCCGGGAGGTTCGATGAGGCCTTGGAATTGATAGAAAGCATGACAGTAGAGAAAGATGAAGGACTATGGGGAGCGTTACTGGGGGCATGTCGGATTCACCGACGTTTAGATTTGGCGAAAAGGGTGGCAAGCTCTCTTCTTGAGCTACAGCCGCAGAACCCAGGGCATTATGTATTGCTTTCAAACATATATGCAAATGCTGGCAAGTGGAAAGATATGGCAAAAACAAGAGATTTGATGACCAAATGTGGACTAAAGAAGATCCCTGGATGGACATGGATTGAGGTGGATGAAAAACTCTATCAATTCAGCGTTGGAGATAAAACACATCCGAGGTCGAGCGAGATCTATGAGATGCTGAAACGAGTGGGCGAGAAGCTTGAGTTGGCTGGCTATGTCCCGGATACAAACTATGTGCTGCATGATGTTGATGAGGAAGTAAAGCAAGGACTTCTATATGCACATAGTGAAAAGTTGGCCATTGCGTTTGGCTTAATAGTCATACCTGGAGACACTCCTATAAGGATTACAAAGAATCTTAGAGTTTGTGGTGACTGCCATACATTTTGCAAGTTTGTATCGTCGATTGAACGGAGAACGATCATACTACGTGACGCCAACCGGTTTCACCACTTCAAGGAAGGGGCTTGCTCATGCAGAGACTATTGGTAA

mRNA sequence

ATGCTGAAATCCAAAAGCCAAATCATTTTCATCAACAATGGAAAGCTTCGATTTTCCTCCGCTTCAGCAACGACTGCAGTGAAAGAAGCTTCTATTTCTGTGCAGTTCAATGTGAATAACCACTCAAATGAACCAAATTCCTCAACCCAAGAATCTCAATCTTCTTTCCTTCTCTATTTTCACCCCAAACGATTTATAACTTTGCTTTTGAGTTGCAGAAATCTCTTTCAAATTAGGCAAGTCCATGGCCATATTGCTTCCAGTGGCGCATTTAGAAACCTCGCGATTGCTAACAAACTTCTCTTCTTATACGCCCAATATGGCGCCTTGGAGGATGCTCATGAACTGTTTGATGAAATGACTGAGAGAGATTCTTATAGCTGGAGTGTAATAGTTGGTGGGTATGCCAAAGTTAAGGATTTTTCTTCTTGTTTTTGGATGTTTAGGGAGCTTGTTCGTTGTGGGATGCCATTGGATAACTATACATTGCCAATTGTTATAAGGGCCTGCAGAGATTTGAAGGACCTGCAATTTGGTAGGGTTATTCATTGTGCCACTTCGAAATGTGGGCTGGATTTTGATCATTTTGTTTGTGCATCTCTTGTTGATATGTATGCTAGGTGTAAAGTGATTGAGGATGCCCGCCAACTGTTTGATAAAATGCCAAGGAGAGATCTTGTGACATGGACAGTGATGGTTGGTGCCTTGGCTGAATGTAGCAGTGCTGTTGAGTCATTGACTTTGTTTGATAGGATGAGGGATGAAGGTATTGTCCCTGATAAAGTGGCGTTGGTGACTGTTGTTTATGCCTGCGCAAAGTTGGGCGCCATGAATAAGGCCAGGGCAATTCATGACTATATTAATGGAACCAGATATGTTTTGGATGTAATTTTAGGGACAGCAATGATCGATATGTATGCGAAATGTGGGAGTGTTGATTTGGCAAGGGAGATTTTTGATCAGATGCAAGTGAAGAATGTGATTACATGGAGTGCCATGATTGCAGCCTATGGATATCACGGACAAGGCGGGAAAGCGCTCGAGTTATTCCCAATGATGTTAAGCAGCGGAATATTGCCAAATCGGATCACGTTTGTCTCGTTGTTGTATGCTTGTAGTCATGCTGGTCTAATTGAAGAGGGCCAGAGATTTTTTGCCTCAATGTGGGATGAGTACGGTGTAAGACCGGATGTAAAACACTATACTTGCATGGTTGATCTCCTAGGTCGAGCCGGGAGGTTCGATGAGGCCTTGGAATTGATAGAAAGCATGACAGTAGAGAAAGATGAAGGACTATGGGGAGCGTTACTGGGGGCATGTCGGATTCACCGACGTTTAGATTTGGCGAAAAGGGTGGCAAGCTCTCTTCTTGAGCTACAGCCGCAGAACCCAGGGCATTATGTATTGCTTTCAAACATATATGCAAATGCTGGCAAGTGGAAAGATATGGCAAAAACAAGAGATTTGATGACCAAATGTGGACTAAAGAAGATCCCTGGATGGACATGGATTGAGGTGGATGAAAAACTCTATCAATTCAGCGTTGGAGATAAAACACATCCGAGGTCGAGCGAGATCTATGAGATGCTGAAACGAGTGGGCGAGAAGCTTGAGTTGGCTGGCTATGTCCCGGATACAAACTATGTGCTGCATGATGTTGATGAGGAAGTAAAGCAAGGACTTCTATATGCACATAGTGAAAAGTTGGCCATTGCGTTTGGCTTAATAGTCATACCTGGAGACACTCCTATAAGGATTACAAAGAATCTTAGAGTTTGTGGTGACTGCCATACATTTTGCAAGTTTGTATCGTCGATTGAACGGAGAACGATCATACTACGTGACGCCAACCGGTTTCACCACTTCAAGGAAGGGGCTTGCTCATGCAGAGACTATTGGTAA

Coding sequence (CDS)

ATGCTGAAATCCAAAAGCCAAATCATTTTCATCAACAATGGAAAGCTTCGATTTTCCTCCGCTTCAGCAACGACTGCAGTGAAAGAAGCTTCTATTTCTGTGCAGTTCAATGTGAATAACCACTCAAATGAACCAAATTCCTCAACCCAAGAATCTCAATCTTCTTTCCTTCTCTATTTTCACCCCAAACGATTTATAACTTTGCTTTTGAGTTGCAGAAATCTCTTTCAAATTAGGCAAGTCCATGGCCATATTGCTTCCAGTGGCGCATTTAGAAACCTCGCGATTGCTAACAAACTTCTCTTCTTATACGCCCAATATGGCGCCTTGGAGGATGCTCATGAACTGTTTGATGAAATGACTGAGAGAGATTCTTATAGCTGGAGTGTAATAGTTGGTGGGTATGCCAAAGTTAAGGATTTTTCTTCTTGTTTTTGGATGTTTAGGGAGCTTGTTCGTTGTGGGATGCCATTGGATAACTATACATTGCCAATTGTTATAAGGGCCTGCAGAGATTTGAAGGACCTGCAATTTGGTAGGGTTATTCATTGTGCCACTTCGAAATGTGGGCTGGATTTTGATCATTTTGTTTGTGCATCTCTTGTTGATATGTATGCTAGGTGTAAAGTGATTGAGGATGCCCGCCAACTGTTTGATAAAATGCCAAGGAGAGATCTTGTGACATGGACAGTGATGGTTGGTGCCTTGGCTGAATGTAGCAGTGCTGTTGAGTCATTGACTTTGTTTGATAGGATGAGGGATGAAGGTATTGTCCCTGATAAAGTGGCGTTGGTGACTGTTGTTTATGCCTGCGCAAAGTTGGGCGCCATGAATAAGGCCAGGGCAATTCATGACTATATTAATGGAACCAGATATGTTTTGGATGTAATTTTAGGGACAGCAATGATCGATATGTATGCGAAATGTGGGAGTGTTGATTTGGCAAGGGAGATTTTTGATCAGATGCAAGTGAAGAATGTGATTACATGGAGTGCCATGATTGCAGCCTATGGATATCACGGACAAGGCGGGAAAGCGCTCGAGTTATTCCCAATGATGTTAAGCAGCGGAATATTGCCAAATCGGATCACGTTTGTCTCGTTGTTGTATGCTTGTAGTCATGCTGGTCTAATTGAAGAGGGCCAGAGATTTTTTGCCTCAATGTGGGATGAGTACGGTGTAAGACCGGATGTAAAACACTATACTTGCATGGTTGATCTCCTAGGTCGAGCCGGGAGGTTCGATGAGGCCTTGGAATTGATAGAAAGCATGACAGTAGAGAAAGATGAAGGACTATGGGGAGCGTTACTGGGGGCATGTCGGATTCACCGACGTTTAGATTTGGCGAAAAGGGTGGCAAGCTCTCTTCTTGAGCTACAGCCGCAGAACCCAGGGCATTATGTATTGCTTTCAAACATATATGCAAATGCTGGCAAGTGGAAAGATATGGCAAAAACAAGAGATTTGATGACCAAATGTGGACTAAAGAAGATCCCTGGATGGACATGGATTGAGGTGGATGAAAAACTCTATCAATTCAGCGTTGGAGATAAAACACATCCGAGGTCGAGCGAGATCTATGAGATGCTGAAACGAGTGGGCGAGAAGCTTGAGTTGGCTGGCTATGTCCCGGATACAAACTATGTGCTGCATGATGTTGATGAGGAAGTAAAGCAAGGACTTCTATATGCACATAGTGAAAAGTTGGCCATTGCGTTTGGCTTAATAGTCATACCTGGAGACACTCCTATAAGGATTACAAAGAATCTTAGAGTTTGTGGTGACTGCCATACATTTTGCAAGTTTGTATCGTCGATTGAACGGAGAACGATCATACTACGTGACGCCAACCGGTTTCACCACTTCAAGGAAGGGGCTTGCTCATGCAGAGACTATTGGTAA
BLAST of CmoCh06G004880 vs. Swiss-Prot
Match: PP147_ARATH (Pentatricopeptide repeat-containing protein At2g03880, mitochondrial OS=Arabidopsis thaliana GN=PCMP-H44 PE=2 SV=1)

HSP 1 Score: 486.1 bits (1250), Expect = 5.8e-136
Identity = 232/568 (40.85%), Postives = 357/568 (62.85%), Query Frame = 1

Query: 66  ITLLLSCRNLFQIRQVHGHIASSGAFRNLAIANKLLFLYAQYGALEDAHELFDEMTERDS 125
           I   +S R + +   +  H+  +G    + + N L+ +Y ++  L DAH+LFD+M +R+ 
Sbjct: 68  IKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLFDQMPQRNV 127

Query: 126 YSWSVIVGGYAKVKDFSSCFWMFRELVRCGMPLDNYTLPIVIRACRDLKDLQFGRVIHCA 185
            SW+ ++  Y+K K       +   ++R  +  + YT   V+R+C  + D+   R++HC 
Sbjct: 128 ISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMSDV---RMLHCG 187

Query: 186 TSKCGLDFDHFVCASLVDMYARCKVIEDARQLFDKMPRRDLVTWTVMVGALAECSSAVES 245
             K GL+ D FV ++L+D++A+    EDA  +FD+M   D + W  ++G  A+ S +  +
Sbjct: 188 IIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVA 247

Query: 246 LTLFDRMRDEGIVPDKVALVTVVYACAKLGAMNKARAIHDYINGTRYVLDVILGTAMIDM 305
           L LF RM+  G + ++  L +V+ AC  L  +      H +I   +Y  D+IL  A++DM
Sbjct: 248 LELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHI--VKYDQDLILNNALVDM 307

Query: 306 YAKCGSVDLAREIFDQMQVKNVITWSAMIAAYGYHGQGGKALELFPMMLSSGILPNRITF 365
           Y KCGS++ A  +F+QM+ ++VITWS MI+    +G   +AL+LF  M SSG  PN IT 
Sbjct: 308 YCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITI 367

Query: 366 VSLLYACSHAGLIEEGQRFFASMWDEYGVRPDVKHYTCMVDLLGRAGRFDEALELIESMT 425
           V +L+ACSHAGL+E+G  +F SM   YG+ P  +HY CM+DLLG+AG+ D+A++L+  M 
Sbjct: 368 VGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEME 427

Query: 426 VEKDEGLWGALLGACRIHRRLDLAKRVASSLLELQPQNPGHYVLLSNIYANAGKWKDMAK 485
            E D   W  LLGACR+ R + LA+  A  ++ L P++ G Y LLSNIYAN+ KW  + +
Sbjct: 428 CEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTLLSNIYANSQKWDSVEE 487

Query: 486 TRDLMTKCGLKKIPGWTWIEVDEKLYQFSVGDKTHPRSSEIYEMLKRVGEKLELAGYVPD 545
            R  M   G+KK PG +WIEV+++++ F +GD +HP+  E+ + L ++  +L   GYVP+
Sbjct: 488 IRTRMRDRGIKKEPGCSWIEVNKQIHAFIIGDNSHPQIVEVSKKLNQLIHRLTGIGYVPE 547

Query: 546 TNYVLHDVDEEVKQGLLYAHSEKLAIAFGLIVIPGDTPIRITKNLRVCGDCHTFCKFVSS 605
           TN+VL D++ E  +  L  HSEKLA+AFGL+ +P +  IRI KNLR+CGDCH FCK  S 
Sbjct: 548 TNFVLQDLEGEQMEDSLRHHSEKLALAFGLMTLPIEKVIRIRKNLRICGDCHVFCKLASK 607

Query: 606 IERRTIILRDANRFHHFKEGACSCRDYW 634
           +E R+I++RD  R+HHF++G CSC DYW
Sbjct: 608 LEIRSIVIRDPIRYHHFQDGKCSCGDYW 630

BLAST of CmoCh06G004880 vs. Swiss-Prot
Match: PPR21_ARATH (Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H12 PE=2 SV=1)

HSP 1 Score: 484.6 bits (1246), Expect = 1.7e-135
Identity = 233/588 (39.63%), Postives = 362/588 (61.56%), Query Frame = 1

Query: 79  RQVHGHIASSGAFRNLAIANKLLFLYAQYGALEDAHELFDEMTERDSYSWSVIVGGYAK- 138
           +Q+HGH+   G   +L +   L+ +Y Q G LEDAH++FD+   RD  S++ ++ GYA  
Sbjct: 154 QQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASR 213

Query: 139 --------------VKD----------------FSSCFWMFRELVRCGMPLDNYTLPIVI 198
                         VKD                +     +F+++++  +  D  T+  V+
Sbjct: 214 GYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVV 273

Query: 199 RACRDLKDLQFGRVIHCATSKCGLDFDHFVCASLVDMYARCKVIEDARQLFDKMPRRDLV 258
            AC     ++ GR +H      G   +  +  +L+D+Y++C  +E A  LF+++P +D++
Sbjct: 274 SACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVI 333

Query: 259 TWTVMVGALAECSSAVESLTLFDRMRDEGIVPDKVALVTVVYACAKLGAMNKARAIHDYI 318
           +W  ++G     +   E+L LF  M   G  P+ V +++++ ACA LGA++  R IH YI
Sbjct: 334 SWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYI 393

Query: 319 N-GTRYVLDV-ILGTAMIDMYAKCGSVDLAREIFDQMQVKNVITWSAMIAAYGYHGQGGK 378
           +   + V +   L T++IDMYAKCG ++ A ++F+ +  K++ +W+AMI  +  HG+   
Sbjct: 394 DKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADA 453

Query: 379 ALELFPMMLSSGILPNRITFVSLLYACSHAGLIEEGQRFFASMWDEYGVRPDVKHYTCMV 438
           + +LF  M   GI P+ ITFV LL ACSH+G+++ G+  F +M  +Y + P ++HY CM+
Sbjct: 454 SFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMI 513

Query: 439 DLLGRAGRFDEALELIESMTVEKDEGLWGALLGACRIHRRLDLAKRVASSLLELQPQNPG 498
           DLLG +G F EA E+I  M +E D  +W +LL AC++H  ++L +  A +L++++P+NPG
Sbjct: 514 DLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPG 573

Query: 499 HYVLLSNIYANAGKWKDMAKTRDLMTKCGLKKIPGWTWIEVDEKLYQFSVGDKTHPRSSE 558
            YVLLSNIYA+AG+W ++AKTR L+   G+KK+PG + IE+D  +++F +GDK HPR+ E
Sbjct: 574 SYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNRE 633

Query: 559 IYEMLKRVGEKLELAGYVPDTNYVLHDVDEEVKQGLLYAHSEKLAIAFGLIVIPGDTPIR 618
           IY ML+ +   LE AG+VPDT+ VL +++EE K+G L  HSEKLAIAFGLI     T + 
Sbjct: 634 IYGMLEEMEVLLEKAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLT 693

Query: 619 ITKNLRVCGDCHTFCKFVSSIERRTIILRDANRFHHFKEGACSCRDYW 634
           I KNLRVC +CH   K +S I +R II RD  RFHHF++G CSC DYW
Sbjct: 694 IVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 741

BLAST of CmoCh06G004880 vs. Swiss-Prot
Match: PP296_ARATH (Pentatricopeptide repeat-containing protein At3g63370, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H83 PE=2 SV=2)

HSP 1 Score: 481.5 bits (1238), Expect = 1.4e-134
Identity = 234/561 (41.71%), Postives = 348/561 (62.03%), Query Frame = 1

Query: 74  NLFQIRQVHGHIASSGAFRNLAIANKLLFLYAQYGALEDAHELFDEMTERDSYSWSVIVG 133
           NL    ++H ++   G   NL + N L+ +Y++          F  M ++D  SW+ ++ 
Sbjct: 401 NLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIA 460

Query: 134 GYAKVKDFSSCFWMFRELVRCGMPLDNYTLPIVIRACRDLKDLQFGRVIHCATSKCGLDF 193
           GYA+         +FR++ +  M +D   L  ++RA   LK +   + IHC   + GL  
Sbjct: 461 GYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGL-L 520

Query: 194 DHFVCASLVDMYARCKVIEDARQLFDKMPRRDLVTWTVMVGALAECSSAVESLTLFDRMR 253
           D  +   LVD+Y +C+ +  A ++F+ +  +D+V+WT M+ + A   +  E++ LF RM 
Sbjct: 521 DTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMV 580

Query: 254 DEGIVPDKVALVTVVYACAKLGAMNKARAIHDYINGTRYVLDVILGTAMIDMYAKCGSVD 313
           + G+  D VAL+ ++ A A L A+NK R IH Y+    + L+  +  A++DMYA CG + 
Sbjct: 581 ETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQ 640

Query: 314 LAREIFDQMQVKNVITWSAMIAAYGYHGQGGKALELFPMMLSSGILPNRITFVSLLYACS 373
            A+ +FD+++ K ++ +++MI AYG HG G  A+ELF  M    + P+ I+F++LLYACS
Sbjct: 641 SAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACS 700

Query: 374 HAGLIEEGQRFFASMWDEYGVRPDVKHYTCMVDLLGRAGRFDEALELIESMTVEKDEGLW 433
           HAGL++EG+ F   M  EY + P  +HY C+VD+LGRA    EA E ++ M  E    +W
Sbjct: 701 HAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTAEVW 760

Query: 434 GALLGACRIHRRLDLAKRVASSLLELQPQNPGHYVLLSNIYANAGKWKDMAKTRDLMTKC 493
            ALL ACR H   ++ +  A  LLEL+P+NPG+ VL+SN++A  G+W D+ K R  M   
Sbjct: 761 CALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGRWNDVEKVRAKMKAS 820

Query: 494 GLKKIPGWTWIEVDEKLYQFSVGDKTHPRSSEIYEMLKRVGEKLEL-AGYVPDTNYVLHD 553
           G++K PG +WIE+D K+++F+  DK+HP S EIYE L  V  KLE   GYV DT +VLH+
Sbjct: 821 GMEKHPGCSWIEMDGKVHKFTARDKSHPESKEIYEKLSEVTRKLEREVGYVADTKFVLHN 880

Query: 554 VDEEVKQGLLYAHSEKLAIAFGLIVIPGDTPIRITKNLRVCGDCHTFCKFVSSIERRTII 613
           VDE  K  +L+ HSE++AIA+GL+  P    +RITKNLRVC DCHTFCK VS + RR I+
Sbjct: 881 VDEGEKVQMLHGHSERIAIAYGLLRTPDRACLRITKNLRVCRDCHTFCKLVSKLFRRDIV 940

Query: 614 LRDANRFHHFKEGACSCRDYW 634
           +RDANRFHHF+ G CSC D W
Sbjct: 941 MRDANRFHHFESGLCSCGDSW 960

BLAST of CmoCh06G004880 vs. Swiss-Prot
Match: PP348_ARATH (Pentatricopeptide repeat-containing protein At4g33990 OS=Arabidopsis thaliana GN=EMB2758 PE=3 SV=2)

HSP 1 Score: 479.2 bits (1232), Expect = 7.1e-134
Identity = 231/573 (40.31%), Postives = 356/573 (62.13%), Query Frame = 1

Query: 66  ITLLLSCRNLFQIRQ---VHGHIASSGAFRNLAIANKLLFLYAQYGALEDAHELFDEMTE 125
           ++LL +C       +   +H +    G    L ++NKL+ LYA++G L D  ++FD M  
Sbjct: 251 VSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYV 310

Query: 126 RDSYSWSVIVGGYAKVKDFSSCFWMFRELVRCGMPLDNYTLPIVIRACRDLKDLQFGRVI 185
           RD  SW+ I+  Y   +       +F+E+    +  D  TL  +      L D++  R +
Sbjct: 311 RDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSV 370

Query: 186 HCATSKCGLDFDHFVCAS-LVDMYARCKVIEDARQLFDKMPRRDLVTWTVMVGALAECSS 245
              T + G   +     + +V MYA+  +++ AR +F+ +P  D+++W  ++   A+   
Sbjct: 371 QGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGF 430

Query: 246 AVESLTLFDRMRDEG-IVPDKVALVTVVYACAKLGAMNKARAIHDYINGTRYVLDVILGT 305
           A E++ +++ M +EG I  ++   V+V+ AC++ GA+ +   +H  +      LDV + T
Sbjct: 431 ASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVT 490

Query: 306 AMIDMYAKCGSVDLAREIFDQMQVKNVITWSAMIAAYGYHGQGGKALELFPMMLSSGILP 365
           ++ DMY KCG ++ A  +F Q+   N + W+ +IA +G+HG G KA+ LF  ML  G+ P
Sbjct: 491 SLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKP 550

Query: 366 NRITFVSLLYACSHAGLIEEGQRFFASMWDEYGVRPDVKHYTCMVDLLGRAGRFDEALEL 425
           + ITFV+LL ACSH+GL++EGQ  F  M  +YG+ P +KHY CMVD+ GRAG+ + AL+ 
Sbjct: 551 DHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKF 610

Query: 426 IESMTVEKDEGLWGALLGACRIHRRLDLAKRVASSLLELQPQNPGHYVLLSNIYANAGKW 485
           I+SM+++ D  +WGALL ACR+H  +DL K  +  L E++P++ G++VLLSN+YA+AGKW
Sbjct: 611 IKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKW 670

Query: 486 KDMAKTRDLMTKCGLKKIPGWTWIEVDEKLYQFSVGDKTHPRSSEIYEMLKRVGEKLELA 545
           + + + R +    GL+K PGW+ +EVD K+  F  G++THP   E+Y  L  +  KL++ 
Sbjct: 671 EGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELTALQAKLKMI 730

Query: 546 GYVPDTNYVLHDVDEEVKQGLLYAHSEKLAIAFGLIVIPGDTPIRITKNLRVCGDCHTFC 605
           GYVPD  +VL DV+++ K+ +L +HSE+LAIAF LI  P  T IRI KNLRVCGDCH+  
Sbjct: 731 GYVPDHRFVLQDVEDDEKEHILMSHSERLAIAFALIATPAKTTIRIFKNLRVCGDCHSVT 790

Query: 606 KFVSSIERRTIILRDANRFHHFKEGACSCRDYW 634
           KF+S I  R II+RD+NRFHHFK G CSC DYW
Sbjct: 791 KFISKITEREIIVRDSNRFHHFKNGVCSCGDYW 823

BLAST of CmoCh06G004880 vs. Swiss-Prot
Match: PP265_ARATH (Pentatricopeptide repeat-containing protein At3g46790, chloroplastic OS=Arabidopsis thaliana GN=CRR2 PE=2 SV=1)

HSP 1 Score: 476.9 bits (1226), Expect = 3.5e-133
Identity = 232/617 (37.60%), Postives = 371/617 (60.13%), Query Frame = 1

Query: 28  KEASISVQFNVNNHSNEPNSSTQESQSSFLLYFHPKRFITLLLSC---RNLFQIRQVHGH 87
           KE  +     V +  + P+  T E                L+L C    +L    +VH H
Sbjct: 58  KEGKLKQAIRVLSQESSPSQQTYE---------------LLILCCGHRSSLSDALRVHRH 117

Query: 88  IASSGAFRNLAIANKLLFLYAQYGALEDAHELFDEMTERDSYSWSVIVGGYAKVKDFSSC 147
           I  +G+ ++  +A KL+ +Y+  G+++ A ++FD+  +R  Y W+ +             
Sbjct: 118 ILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEV 177

Query: 148 FWMFRELVRCGMPLDNYTLPIVIRACR----DLKDLQFGRVIHCATSKCGLDFDHFVCAS 207
             ++ ++ R G+  D +T   V++AC      +  L  G+ IH   ++ G     ++  +
Sbjct: 178 LGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTT 237

Query: 208 LVDMYARCKVIEDARQLFDKMPRRDLVTWTVMVGALAECSSAVESLTLFDRMRDE--GIV 267
           LVDMYAR   ++ A  +F  MP R++V+W+ M+   A+   A E+L  F  M  E     
Sbjct: 238 LVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSS 297

Query: 268 PDKVALVTVVYACAKLGAMNKARAIHDYI--NGTRYVLDVILGTAMIDMYAKCGSVDLAR 327
           P+ V +V+V+ ACA L A+ + + IH YI   G   +L VI  +A++ MY +CG +++ +
Sbjct: 298 PNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVI--SALVTMYGRCGKLEVGQ 357

Query: 328 EIFDQMQVKNVITWSAMIAAYGYHGQGGKALELFPMMLSSGILPNRITFVSLLYACSHAG 387
            +FD+M  ++V++W+++I++YG HG G KA+++F  ML++G  P  +TFVS+L ACSH G
Sbjct: 358 RVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEG 417

Query: 388 LIEEGQRFFASMWDEYGVRPDVKHYTCMVDLLGRAGRFDEALELIESMTVEKDEGLWGAL 447
           L+EEG+R F +MW ++G++P ++HY CMVDLLGRA R DEA ++++ M  E    +WG+L
Sbjct: 418 LVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSL 477

Query: 448 LGACRIHRRLDLAKRVASSLLELQPQNPGHYVLLSNIYANAGKWKDMAKTRDLMTKCGLK 507
           LG+CRIH  ++LA+R +  L  L+P+N G+YVLL++IYA A  W ++ + + L+   GL+
Sbjct: 478 LGSCRIHGNVELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDEVKRVKKLLEHRGLQ 537

Query: 508 KIPGWTWIEVDEKLYQFSVGDKTHPRSSEIYEMLKRVGEKLELAGYVPDTNYVLHDVDEE 567
           K+PG  W+EV  K+Y F   D+ +P   +I+  L ++ E ++  GY+P T  VL++++ E
Sbjct: 538 KLPGRCWMEVRRKMYSFVSVDEFNPLMEQIHAFLVKLAEDMKEKGYIPQTKGVLYELETE 597

Query: 568 VKQGLLYAHSEKLAIAFGLIVIPGDTPIRITKNLRVCGDCHTFCKFVSSIERRTIILRDA 627
            K+ ++  HSEKLA+AFGLI      PIRITKNLR+C DCH F KF+S    + I++RD 
Sbjct: 598 EKERIVLGHSEKLALAFGLINTSKGEPIRITKNLRLCEDCHLFTKFISKFMEKEILVRDV 657

Query: 628 NRFHHFKEGACSCRDYW 634
           NRFH FK G CSC DYW
Sbjct: 658 NRFHRFKNGVCSCGDYW 657

BLAST of CmoCh06G004880 vs. TrEMBL
Match: A0A0A0LE23_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G777570 PE=4 SV=1)

HSP 1 Score: 1025.4 bits (2650), Expect = 3.0e-296
Identity = 500/633 (78.99%), Postives = 554/633 (87.52%), Query Frame = 1

Query: 1   MLKSKSQIIFINNGKLRFSSASATTAVKEASISVQFNVNNHSNEPNSSTQESQSSFLLYF 60
           MLKSK   IFIN GKLRFSS         AS+S QF+VN +SNEP   +QES+ S +L++
Sbjct: 1   MLKSKCHHIFINYGKLRFSS---------ASLSWQFDVNCNSNEPTPCSQESECSHVLHY 60

Query: 61  HPKRFITLLLSCRNLFQIRQVHGHIASSGAFRNLAIANKLLFLYAQYGALEDAHELFDEM 120
             KRF + LLSCRNLFQ+RQVH  IA++GAFRNLA+ANKLL++Y + GALEDA ELFD M
Sbjct: 61  DTKRFRSSLLSCRNLFQVRQVHAQIATNGAFRNLAVANKLLYMYVERGALEDAQELFDGM 120

Query: 121 TERDSYSWSVIVGGYAKVKDFSSCFWMFRELVRCGMPLDNYTLPIVIRACRDLKDLQFGR 180
           ++R  YSWSVIVGGYAKV +F SCFWMFREL+R G PLD+Y+ P+VIRACRDLKDL+ GR
Sbjct: 121 SKRHPYSWSVIVGGYAKVGNFFSCFWMFRELLRSGAPLDDYSAPVVIRACRDLKDLKCGR 180

Query: 181 VIHCATSKCGLDFDHFVCASLVDMYARCKVIEDARQLFDKMPRRDLVTWTVMVGALAECS 240
           +IHC T KCGLD+ HFVCA+LVDMYARCKV+EDA Q+F KM +RDL TWTVM+GALAE  
Sbjct: 181 LIHCITLKCGLDYGHFVCATLVDMYARCKVVEDAHQIFVKMWKRDLATWTVMIGALAESG 240

Query: 241 SAVESLTLFDRMRDEGIVPDKVALVTVVYACAKLGAMNKARAIHDYINGTRYVLDVILGT 300
             VESL  FDRMR++GIVPDKVALVTVVYACAKLGAMNKA+AIH YINGT Y LDVILGT
Sbjct: 241 VPVESLVFFDRMRNQGIVPDKVALVTVVYACAKLGAMNKAKAIHAYINGTGYSLDVILGT 300

Query: 301 AMIDMYAKCGSVDLAREIFDQMQVKNVITWSAMIAAYGYHGQGGKALELFPMMLSSGILP 360
           AMIDMYAKCGSV+ AR IFD+MQV+NVITWSAMIAAYGYHGQG KALELFPMML SGILP
Sbjct: 301 AMIDMYAKCGSVESARWIFDRMQVRNVITWSAMIAAYGYHGQGEKALELFPMMLRSGILP 360

Query: 361 NRITFVSLLYACSHAGLIEEGQRFFASMWDEYGVRPDVKHYTCMVDLLGRAGRFDEALEL 420
           NRITFVSLLYACSHAGLIEEGQRFF+SMWDEYGV PDVKHYTCMVDLLGRAGR DEALE+
Sbjct: 361 NRITFVSLLYACSHAGLIEEGQRFFSSMWDEYGVTPDVKHYTCMVDLLGRAGRLDEALEM 420

Query: 421 IESMTVEKDEGLWGALLGACRIHRRLDLAKRVASSLLELQPQNPGHYVLLSNIYANAGKW 480
           IE M VEKDE LWGALLGACRIHR LDLA+RVA SLL+LQ Q PGHYVLLSNIYANAGKW
Sbjct: 421 IEGMPVEKDEVLWGALLGACRIHRHLDLAERVARSLLKLQSQKPGHYVLLSNIYANAGKW 480

Query: 481 KDMAKTRDLMTKCGLKKIPGWTWIEVDEKLYQFSVGDKTHPRSSEIYEMLKRVGEKLELA 540
           +DMAKTRDLMTK GL+KIPG TWIEV EKLYQF VGDKTHPRS+EIY+MLKR+GEKLE+A
Sbjct: 481 EDMAKTRDLMTKGGLRKIPGRTWIEVGEKLYQFGVGDKTHPRSNEIYKMLKRLGEKLEVA 540

Query: 541 GYVPDTNYVLHDVDEEVKQGLLYAHSEKLAIAFGLIVIPGDTPIRITKNLRVCGDCHTFC 600
           GY PDTN VL+DVDEEVKQGLLY+HSEKLAIAFGL+V+P   PIRITKNLRVCGDCHTFC
Sbjct: 541 GYHPDTNDVLYDVDEEVKQGLLYSHSEKLAIAFGLLVLPQGHPIRITKNLRVCGDCHTFC 600

Query: 601 KFVSSIERRTIILRDANRFHHFKEGACSCRDYW 634
           KFVS IE++TII+RDA RFHHFKEG CSCRDYW
Sbjct: 601 KFVSLIEQKTIIVRDAKRFHHFKEGVCSCRDYW 624

BLAST of CmoCh06G004880 vs. TrEMBL
Match: V4T1L8_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10013825mg PE=4 SV=1)

HSP 1 Score: 889.8 bits (2298), Expect = 1.9e-255
Identity = 417/572 (72.90%), Postives = 485/572 (84.79%), Query Frame = 1

Query: 62  PKRFITLLLSCRNLFQIRQVHGHIASSGAFRNLAIANKLLFLYAQYGALEDAHELFDEMT 121
           PK FI+ LLSCRN+FQIRQVH  I + G   NL +ANKLL++YA + AL DAH LF+ M 
Sbjct: 15  PKFFISSLLSCRNIFQIRQVHAQIVAGGTLTNLIVANKLLYIYALHKALTDAHALFNGMK 74

Query: 122 ERDSYSWSVIVGGYAKVKDFSSCFWMFRELVRCGMPLDNYTLPIVIRACRDLKDLQFGRV 181
           ERDS SWSV+VGG++KV DF +CF  FRE +RCGM LD+YTLP VIRACRD KD+  GR+
Sbjct: 75  ERDSVSWSVMVGGFSKVADFINCFETFREFIRCGMQLDSYTLPFVIRACRDRKDIVMGRL 134

Query: 182 IHCATSKCGLDFDHFVCASLVDMYARCKVIEDARQLFDKMPRRDLVTWTVMVGALAECSS 241
           IH    K GLD D FVCA+LVDMYA+CKVI+DARQLFD+MP RDLVTWTVM+GA AE  +
Sbjct: 135 IHDIVLKSGLDIDQFVCAALVDMYAKCKVIDDARQLFDQMPTRDLVTWTVMIGACAESGN 194

Query: 242 AVESLTLFDRMRDEGIVPDKVALVTVVYACAKLGAMNKARAIHDYINGTRYVLDVILGTA 301
           A ES  LF+RMR EG+V D  A+V+VVYACAKLG+++KAR +HD++   +++LDVILGTA
Sbjct: 195 ANESWDLFERMRGEGVVLDNTAMVSVVYACAKLGSIHKARLVHDFLTRNKFLLDVILGTA 254

Query: 302 MIDMYAKCGSVDLAREIFDQMQVKNVITWSAMIAAYGYHGQGGKALELFPMMLSSGILPN 361
           +IDMYAKCGS+D AREIF++M+ KNVI+WSAMIAAYGYHGQG KAL+LFPMMLSS +LPN
Sbjct: 255 VIDMYAKCGSIDSAREIFERMRQKNVISWSAMIAAYGYHGQGKKALDLFPMMLSSRVLPN 314

Query: 362 RITFVSLLYACSHAGLIEEGQRFFASMWDEYGVRPDVKHYTCMVDLLGRAGRFDEALELI 421
           RITFVSLLYACSH GL+EEG R F+SMWD++ VRPDVKHYTCMVDLLGRAGR DEAL+LI
Sbjct: 315 RITFVSLLYACSHTGLVEEGLRLFSSMWDDFAVRPDVKHYTCMVDLLGRAGRLDEALKLI 374

Query: 422 ESMTVEKDEGLWGALLGACRIHRRLDLAKRVASSLLELQPQNPGHYVLLSNIYANAGKWK 481
           ESM+VEKDEGLWGALLGACRIH+ +DLA+  A SLLE QPQNPGHYVLLSNIYANAG+W+
Sbjct: 375 ESMSVEKDEGLWGALLGACRIHKNVDLAEMAAKSLLERQPQNPGHYVLLSNIYANAGRWQ 434

Query: 482 DMAKTRDLMTKCGLKKIPGWTWIEVDEKLYQFSVGDKTHPRSSEIYEMLKRVGEKLELAG 541
           D+AK RDLMT+  LKKIPGWTWIEV+ K++QFSVGD THP+S EIY ML  + EKLELAG
Sbjct: 435 DVAKIRDLMTRRRLKKIPGWTWIEVENKIHQFSVGDSTHPQSEEIYRMLVTLSEKLELAG 494

Query: 542 YVPDTNYVLHDVDEEVKQGLLYAHSEKLAIAFGLIVIPGDTPIRITKNLRVCGDCHTFCK 601
           Y+PDTN+ LHDVDEEVK G LY+HSEKLAIAFGLI  P  T IRI KNLRVCGDCH+F K
Sbjct: 495 YIPDTNFELHDVDEEVKVGNLYSHSEKLAIAFGLIATPEGTHIRIMKNLRVCGDCHSFIK 554

Query: 602 FVSSIERRTIILRDANRFHHFKEGACSCRDYW 634
            VS+I RR II+RDANRFHHF+ GACSCRDYW
Sbjct: 555 HVSAITRRVIIVRDANRFHHFEGGACSCRDYW 586

BLAST of CmoCh06G004880 vs. TrEMBL
Match: A5C1S9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_014227 PE=4 SV=1)

HSP 1 Score: 875.2 bits (2260), Expect = 4.9e-251
Identity = 412/560 (73.57%), Postives = 471/560 (84.11%), Query Frame = 1

Query: 74   NLFQIRQVHGHIASSGAFRNLAIANKLLFLYAQYGALEDAHELFDEMTERDSYSWSVIVG 133
            NL Q+RQVH   +  G  +NL +ANKL+  Y+ Y AL+DA+ LFD M  RDS SWSV+VG
Sbjct: 750  NLTQVRQVHXQASVHGMLQNLIVANKLVXFYSYYRALDDAYGLFDGMCVRDSVSWSVMVG 809

Query: 134  GYAKVKDFSSCFWMFRELVRCGMPLDNYTLPIVIRACRDLKDLQFGRVIHCATSKCGLDF 193
            G+AKV D+ +CF  FREL+RCG   DNYTLP VIRACRDLK+LQ GR+IH    K GLD 
Sbjct: 810  GFAKVGDYMNCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDL 869

Query: 194  DHFVCASLVDMYARCKVIEDARQLFDKMPRRDLVTWTVMVGALAECSSAVESLTLFDRMR 253
            DHFVCA+LVDMY +C+ IEDAR LFDKM  RDLVTWTVM+G  AEC +A ESL LFD+MR
Sbjct: 870  DHFVCAALVDMYGKCREIEDARFLFDKMXERDLVTWTVMIGGYAECGNANESLVLFDKMR 929

Query: 254  DEGIVPDKVALVTVVYACAKLGAMNKARAIHDYINGTRYVLDVILGTAMIDMYAKCGSVD 313
            +EG+VPDKVA+VTVV+ACAKLGAM+KAR I DYI   ++ LDVILGTAMIDM+AKCG V+
Sbjct: 930  EEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVE 989

Query: 314  LAREIFDQMQVKNVITWSAMIAAYGYHGQGGKALELFPMMLSSGILPNRITFVSLLYACS 373
             AREIFD+M+ KNVI+WSAMIAAYGYHGQG KAL+LFPMML SGILPN+IT VSLLYACS
Sbjct: 990  SAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACS 1049

Query: 374  HAGLIEEGQRFFASMWDEYGVRPDVKHYTCMVDLLGRAGRFDEALELIESMTVEKDEGLW 433
            HAGL+EEG RFF+ MW++Y VR DVKHYTC+VDLLGRAGR DEAL+LI SMT EKDEGLW
Sbjct: 1050 HAGLVEEGLRFFSXMWEDYSVRXDVKHYTCVVDLLGRAGRLDEALKLIXSMTXEKDEGLW 1109

Query: 434  GALLGACRIHRRLDLAKRVASSLLELQPQNPGHYVLLSNIYANAGKWKDMAKTRDLMTKC 493
            GA LGACR H+ + LA++ A+SLLELQPQNPGHY+LLSNIYANAG+W+D+AK RDLM++ 
Sbjct: 1110 GAFLGACRTHKDVXLAEKAATSLLELQPQNPGHYILLSNIYANAGRWEDVAKIRDLMSQR 1169

Query: 494  GLKKIPGWTWIEVDEKLYQFSVGDKTHPRSSEIYEMLKRVGEKLELAGYVPDTNYVLHDV 553
             LKKIPGWTWIEVD K +QFSVGD THPRS EIYEMLK +G KLEL GYVPDTN+VLHDV
Sbjct: 1170 RLKKIPGWTWIEVDNKSHQFSVGDTTHPRSKEIYEMLKSLGNKLELVGYVPDTNFVLHDV 1229

Query: 554  DEEVKQGLLYAHSEKLAIAFGLIVIPGDTPIRITKNLRVCGDCHTFCKFVSSIERRTIIL 613
            DEE+K G+LY HSEKLAIAFGLI  P  TPIRI KNLRVCGDCHTFCK VS+I  R II+
Sbjct: 1230 DEELKIGILYTHSEKLAIAFGLIATPEHTPIRIIKNLRVCGDCHTFCKLVSAITGRVIIV 1289

Query: 614  RDANRFHHFKEGACSCRDYW 634
            RDANRFHHFKEGACSC DYW
Sbjct: 1290 RDANRFHHFKEGACSCGDYW 1309

BLAST of CmoCh06G004880 vs. TrEMBL
Match: A0A0D2MF68_GOSRA (Uncharacterized protein (Fragment) OS=Gossypium raimondii GN=B456_002G238700 PE=4 SV=1)

HSP 1 Score: 865.5 bits (2235), Expect = 3.9e-248
Identity = 418/638 (65.52%), Postives = 499/638 (78.21%), Query Frame = 1

Query: 1   MLKSKSQIIFINNGKLRF-----SSASATTAVKEASISVQFNVNNHSNEPNSSTQESQSS 60
           MLK      F+     RF     S  +AT   +E S+  Q     H+ +P     ES  S
Sbjct: 25  MLKLTKTQTFLTANHERFRLLPLSQLAATVDTQETSLKSQ----THTQKP----LESHPS 84

Query: 61  FLLYFHPKRFITLLLSCRNLFQIRQVHGHIASSGAFRNLAIANKLLFLYAQYGALEDAHE 120
             L+  PK F+++LL+C+N+FQI+Q H  I ++G   NL ++NKLL++Y Q+ A+++AH 
Sbjct: 85  --LHIDPKYFVSVLLNCKNIFQIKQAHAQIVANGLLTNLFVSNKLLYIYVQHKAIDEAHA 144

Query: 121 LFDEMTERDSYSWSVIVGGYAKVKDFSSCFWMFRELVRCGMPLDNYTLPIVIRACRDLKD 180
            F  M E+D  SWSV+VGG+AK  DF +CF  F+EL RC +  DNYTLP V+R CRD  D
Sbjct: 145 FFGGMREKDPVSWSVMVGGFAKDGDFVNCFRTFKELTRCSVQPDNYTLPFVLRVCRDRMD 204

Query: 181 LQFGRVIHCATSKCGLDFDHFVCASLVDMYARCKVIEDARQLFDKMPRRDLVTWTVMVGA 240
           L  G ++H    K GL +DHFVCA+LVDMYA+C+VI+DAR+LFD M ++DLVTWTVM+  
Sbjct: 205 LLMGSLVHGVVLKSGLSWDHFVCAALVDMYAKCRVIDDARKLFDDMHKKDLVTWTVMIDG 264

Query: 241 LAECSSAVESLTLFDRMRDEGIVPDKVALVTVVYACAKLGAMNKARAIHDYINGTRYVLD 300
            AEC +A ESL LFD MR+EGIVPDK+ +VTVV AC+KLGAM+KAR +HDYI   ++ L 
Sbjct: 265 YAECGNANESLVLFDWMREEGIVPDKITMVTVVNACSKLGAMHKARFVHDYICSMKFSLT 324

Query: 301 VILGTAMIDMYAKCGSVDLAREIFDQMQVKNVITWSAMIAAYGYHGQGGKALELFPMMLS 360
           VILGTAMIDMYAKCGSVD AREIFD M+ KNVI+WS MIAAYGYHGQG KAL+LFPMML+
Sbjct: 325 VILGTAMIDMYAKCGSVDFAREIFDGMREKNVISWSVMIAAYGYHGQGKKALDLFPMMLN 384

Query: 361 SGILPNRITFVSLLYACSHAGLIEEGQRFFASMWDEYGVRPDVKHYTCMVDLLGRAGRFD 420
            GI+PNRITFVSLLYACSHAGL++EG   F  MWD+YGV+PDVKH TCMVDLLGRAGR D
Sbjct: 385 CGIMPNRITFVSLLYACSHAGLVDEGFELFNIMWDKYGVKPDVKHCTCMVDLLGRAGRLD 444

Query: 421 EALELIESMTVEKDEGLWGALLGACRIHRRLDLAKRVASSLLELQPQNPGHYVLLSNIYA 480
           EAL+LIE+MTVEKDEGLW A L ACRIH+ ++LA+  A SLLELQPQNPGHYVLLSN+YA
Sbjct: 445 EALKLIENMTVEKDEGLWSAFLAACRIHKHVELAEWAAKSLLELQPQNPGHYVLLSNVYA 504

Query: 481 NAGKWKDMAKTRDLMTKCGLKKIPGWTWIEVDEKLYQFSVGDKTHPRSSEIYEMLKRVGE 540
           NAG W+DMAK R+LMTK  LKKIPGWTWIEVD K++QFSVGDK+HP S EIY +LK + E
Sbjct: 505 NAGMWEDMAKVRNLMTKGNLKKIPGWTWIEVDNKIHQFSVGDKSHPLSKEIYGLLKSLIE 564

Query: 541 KLELAGYVPDTNYVLHDVDEEVKQGLLYAHSEKLAIAFGLIVIPGDTPIRITKNLRVCGD 600
           KLELAGYVPDTN+VLHDVDEEVK G+LY HSEKLAI FGLI  P  TPIRITKNLRVCGD
Sbjct: 565 KLELAGYVPDTNFVLHDVDEEVKVGMLYTHSEKLAITFGLIATPEGTPIRITKNLRVCGD 624

Query: 601 CHTFCKFVSSIERRTIILRDANRFHHFKEGACSCRDYW 634
           CHTF KFVS+I +R+II+RD+NRFHHF EGACSC DYW
Sbjct: 625 CHTFIKFVSAITKRSIIVRDSNRFHHFIEGACSCGDYW 652

BLAST of CmoCh06G004880 vs. TrEMBL
Match: I1JGM4_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_02G201800 PE=4 SV=2)

HSP 1 Score: 857.8 bits (2215), Expect = 8.2e-246
Identity = 407/568 (71.65%), Postives = 479/568 (84.33%), Query Frame = 1

Query: 66  ITLLLSCRNLFQIRQVHGHIASSGAFRNLAIANKLLFLYAQYGALEDAHELFDEMTERDS 125
           I LLL CRN+F IRQVH H+ ++G  ++L IANKLL+ YAQ+ A++DA+ LFD +T RDS
Sbjct: 7   IDLLLRCRNVFHIRQVHAHVVANGTLQDLVIANKLLYTYAQHKAIDDAYSLFDGLTMRDS 66

Query: 126 YSWSVIVGGYAKVKDFSSCFWMFRELVRCGMPLDNYTLPIVIRACRDLKDLQFGRVIHCA 185
            +WSV+VGG+AK  D + C+  FREL+RCG+  DNYTLP VIR CRD  DLQ GRVIH  
Sbjct: 67  KTWSVMVGGFAKAGDHAGCYATFRELLRCGVTPDNYTLPFVIRTCRDRTDLQIGRVIHDV 126

Query: 186 TSKCGLDFDHFVCASLVDMYARCKVIEDARQLFDKMPRRDLVTWTVMVGALAECSSAVES 245
             K GL  DHFVCASLVDMYA+C V+EDA++LF++M  +DLVTWTVM+GA A+C+ A ES
Sbjct: 127 VLKHGLLSDHFVCASLVDMYAKCIVVEDAQRLFERMLSKDLVTWTVMIGAYADCN-AYES 186

Query: 246 LTLFDRMRDEGIVPDKVALVTVVYACAKLGAMNKARAIHDYINGTRYVLDVILGTAMIDM 305
           L LFDRMR+EG+VPDKVA+VTVV ACAKLGAM++AR  +DYI    + LDVILGTAMIDM
Sbjct: 187 LVLFDRMREEGVVPDKVAMVTVVNACAKLGAMHRARFANDYIVRNGFSLDVILGTAMIDM 246

Query: 306 YAKCGSVDLAREIFDQMQVKNVITWSAMIAAYGYHGQGGKALELFPMMLSSGILPNRITF 365
           YAKCGSV+ ARE+FD+M+ KNVI+WSAMIAAYGYHG+G  A++LF MMLS  ILPNR+TF
Sbjct: 247 YAKCGSVESAREVFDRMKEKNVISWSAMIAAYGYHGRGKDAIDLFHMMLSCAILPNRVTF 306

Query: 366 VSLLYACSHAGLIEEGQRFFASMWDEYGVRPDVKHYTCMVDLLGRAGRFDEALELIESMT 425
           VSLLYACSHAGLIEEG RFF SMW+E+ VRPDVKHYTCMVDLLGRAGR DEAL LIE+MT
Sbjct: 307 VSLLYACSHAGLIEEGLRFFNSMWEEHAVRPDVKHYTCMVDLLGRAGRLDEALRLIEAMT 366

Query: 426 VEKDEGLWGALLGACRIHRRLDLAKRVASSLLELQPQNPGHYVLLSNIYANAGKWKDMAK 485
           VEKDE LW ALLGACRIH +++LA++ A+SLLELQPQNPGHYVLLSNIYA AGKW+ +AK
Sbjct: 367 VEKDERLWSALLGACRIHSKMELAEKAANSLLELQPQNPGHYVLLSNIYAKAGKWEKVAK 426

Query: 486 TRDLMTKCGLKKIPGWTWIEVDEKLYQFSVGDKTHPRSSEIYEMLKRVGEKLELAGYVPD 545
            RD+MT+  LKKIPGWTWIEVD K YQFSVGD++HP+S EIYEML  + +KLE+AGYVPD
Sbjct: 427 FRDMMTQRKLKKIPGWTWIEVDNKTYQFSVGDRSHPQSKEIYEMLMSLIKKLEMAGYVPD 486

Query: 546 TNYVLHDVDEEVKQGLLYAHSEKLAIAFGLIVIPGDTPIRITKNLRVCGDCHTFCKFVSS 605
           T++VL DV+EEVKQ +LY HSEKLAIAFGLI IP   PIRI+KNLRVCGDCHTF K VSS
Sbjct: 487 TDFVLQDVEEEVKQEMLYTHSEKLAIAFGLIAIPEGEPIRISKNLRVCGDCHTFSKMVSS 546

Query: 606 IERRTIILRDANRFHHFKEGACSCRDYW 634
           I RR+II+RDANRFHHF +G CSC DYW
Sbjct: 547 IMRRSIIVRDANRFHHFNDGTCSCGDYW 573

BLAST of CmoCh06G004880 vs. TAIR10
Match: AT2G03880.1 (AT2G03880.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 486.1 bits (1250), Expect = 3.3e-137
Identity = 232/568 (40.85%), Postives = 357/568 (62.85%), Query Frame = 1

Query: 66  ITLLLSCRNLFQIRQVHGHIASSGAFRNLAIANKLLFLYAQYGALEDAHELFDEMTERDS 125
           I   +S R + +   +  H+  +G    + + N L+ +Y ++  L DAH+LFD+M +R+ 
Sbjct: 68  IKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLFDQMPQRNV 127

Query: 126 YSWSVIVGGYAKVKDFSSCFWMFRELVRCGMPLDNYTLPIVIRACRDLKDLQFGRVIHCA 185
            SW+ ++  Y+K K       +   ++R  +  + YT   V+R+C  + D+   R++HC 
Sbjct: 128 ISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMSDV---RMLHCG 187

Query: 186 TSKCGLDFDHFVCASLVDMYARCKVIEDARQLFDKMPRRDLVTWTVMVGALAECSSAVES 245
             K GL+ D FV ++L+D++A+    EDA  +FD+M   D + W  ++G  A+ S +  +
Sbjct: 188 IIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVA 247

Query: 246 LTLFDRMRDEGIVPDKVALVTVVYACAKLGAMNKARAIHDYINGTRYVLDVILGTAMIDM 305
           L LF RM+  G + ++  L +V+ AC  L  +      H +I   +Y  D+IL  A++DM
Sbjct: 248 LELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHI--VKYDQDLILNNALVDM 307

Query: 306 YAKCGSVDLAREIFDQMQVKNVITWSAMIAAYGYHGQGGKALELFPMMLSSGILPNRITF 365
           Y KCGS++ A  +F+QM+ ++VITWS MI+    +G   +AL+LF  M SSG  PN IT 
Sbjct: 308 YCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITI 367

Query: 366 VSLLYACSHAGLIEEGQRFFASMWDEYGVRPDVKHYTCMVDLLGRAGRFDEALELIESMT 425
           V +L+ACSHAGL+E+G  +F SM   YG+ P  +HY CM+DLLG+AG+ D+A++L+  M 
Sbjct: 368 VGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEME 427

Query: 426 VEKDEGLWGALLGACRIHRRLDLAKRVASSLLELQPQNPGHYVLLSNIYANAGKWKDMAK 485
            E D   W  LLGACR+ R + LA+  A  ++ L P++ G Y LLSNIYAN+ KW  + +
Sbjct: 428 CEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTLLSNIYANSQKWDSVEE 487

Query: 486 TRDLMTKCGLKKIPGWTWIEVDEKLYQFSVGDKTHPRSSEIYEMLKRVGEKLELAGYVPD 545
            R  M   G+KK PG +WIEV+++++ F +GD +HP+  E+ + L ++  +L   GYVP+
Sbjct: 488 IRTRMRDRGIKKEPGCSWIEVNKQIHAFIIGDNSHPQIVEVSKKLNQLIHRLTGIGYVPE 547

Query: 546 TNYVLHDVDEEVKQGLLYAHSEKLAIAFGLIVIPGDTPIRITKNLRVCGDCHTFCKFVSS 605
           TN+VL D++ E  +  L  HSEKLA+AFGL+ +P +  IRI KNLR+CGDCH FCK  S 
Sbjct: 548 TNFVLQDLEGEQMEDSLRHHSEKLALAFGLMTLPIEKVIRIRKNLRICGDCHVFCKLASK 607

Query: 606 IERRTIILRDANRFHHFKEGACSCRDYW 634
           +E R+I++RD  R+HHF++G CSC DYW
Sbjct: 608 LEIRSIVIRDPIRYHHFQDGKCSCGDYW 630

BLAST of CmoCh06G004880 vs. TAIR10
Match: AT1G08070.1 (AT1G08070.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 484.6 bits (1246), Expect = 9.5e-137
Identity = 233/588 (39.63%), Postives = 362/588 (61.56%), Query Frame = 1

Query: 79  RQVHGHIASSGAFRNLAIANKLLFLYAQYGALEDAHELFDEMTERDSYSWSVIVGGYAK- 138
           +Q+HGH+   G   +L +   L+ +Y Q G LEDAH++FD+   RD  S++ ++ GYA  
Sbjct: 154 QQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASR 213

Query: 139 --------------VKD----------------FSSCFWMFRELVRCGMPLDNYTLPIVI 198
                         VKD                +     +F+++++  +  D  T+  V+
Sbjct: 214 GYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVV 273

Query: 199 RACRDLKDLQFGRVIHCATSKCGLDFDHFVCASLVDMYARCKVIEDARQLFDKMPRRDLV 258
            AC     ++ GR +H      G   +  +  +L+D+Y++C  +E A  LF+++P +D++
Sbjct: 274 SACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVI 333

Query: 259 TWTVMVGALAECSSAVESLTLFDRMRDEGIVPDKVALVTVVYACAKLGAMNKARAIHDYI 318
           +W  ++G     +   E+L LF  M   G  P+ V +++++ ACA LGA++  R IH YI
Sbjct: 334 SWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYI 393

Query: 319 N-GTRYVLDV-ILGTAMIDMYAKCGSVDLAREIFDQMQVKNVITWSAMIAAYGYHGQGGK 378
           +   + V +   L T++IDMYAKCG ++ A ++F+ +  K++ +W+AMI  +  HG+   
Sbjct: 394 DKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADA 453

Query: 379 ALELFPMMLSSGILPNRITFVSLLYACSHAGLIEEGQRFFASMWDEYGVRPDVKHYTCMV 438
           + +LF  M   GI P+ ITFV LL ACSH+G+++ G+  F +M  +Y + P ++HY CM+
Sbjct: 454 SFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMI 513

Query: 439 DLLGRAGRFDEALELIESMTVEKDEGLWGALLGACRIHRRLDLAKRVASSLLELQPQNPG 498
           DLLG +G F EA E+I  M +E D  +W +LL AC++H  ++L +  A +L++++P+NPG
Sbjct: 514 DLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPG 573

Query: 499 HYVLLSNIYANAGKWKDMAKTRDLMTKCGLKKIPGWTWIEVDEKLYQFSVGDKTHPRSSE 558
            YVLLSNIYA+AG+W ++AKTR L+   G+KK+PG + IE+D  +++F +GDK HPR+ E
Sbjct: 574 SYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNRE 633

Query: 559 IYEMLKRVGEKLELAGYVPDTNYVLHDVDEEVKQGLLYAHSEKLAIAFGLIVIPGDTPIR 618
           IY ML+ +   LE AG+VPDT+ VL +++EE K+G L  HSEKLAIAFGLI     T + 
Sbjct: 634 IYGMLEEMEVLLEKAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLT 693

Query: 619 ITKNLRVCGDCHTFCKFVSSIERRTIILRDANRFHHFKEGACSCRDYW 634
           I KNLRVC +CH   K +S I +R II RD  RFHHF++G CSC DYW
Sbjct: 694 IVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 741

BLAST of CmoCh06G004880 vs. TAIR10
Match: AT4G33990.1 (AT4G33990.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 479.2 bits (1232), Expect = 4.0e-135
Identity = 231/573 (40.31%), Postives = 356/573 (62.13%), Query Frame = 1

Query: 66  ITLLLSCRNLFQIRQ---VHGHIASSGAFRNLAIANKLLFLYAQYGALEDAHELFDEMTE 125
           ++LL +C       +   +H +    G    L ++NKL+ LYA++G L D  ++FD M  
Sbjct: 251 VSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYV 310

Query: 126 RDSYSWSVIVGGYAKVKDFSSCFWMFRELVRCGMPLDNYTLPIVIRACRDLKDLQFGRVI 185
           RD  SW+ I+  Y   +       +F+E+    +  D  TL  +      L D++  R +
Sbjct: 311 RDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSV 370

Query: 186 HCATSKCGLDFDHFVCAS-LVDMYARCKVIEDARQLFDKMPRRDLVTWTVMVGALAECSS 245
              T + G   +     + +V MYA+  +++ AR +F+ +P  D+++W  ++   A+   
Sbjct: 371 QGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGF 430

Query: 246 AVESLTLFDRMRDEG-IVPDKVALVTVVYACAKLGAMNKARAIHDYINGTRYVLDVILGT 305
           A E++ +++ M +EG I  ++   V+V+ AC++ GA+ +   +H  +      LDV + T
Sbjct: 431 ASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVT 490

Query: 306 AMIDMYAKCGSVDLAREIFDQMQVKNVITWSAMIAAYGYHGQGGKALELFPMMLSSGILP 365
           ++ DMY KCG ++ A  +F Q+   N + W+ +IA +G+HG G KA+ LF  ML  G+ P
Sbjct: 491 SLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKP 550

Query: 366 NRITFVSLLYACSHAGLIEEGQRFFASMWDEYGVRPDVKHYTCMVDLLGRAGRFDEALEL 425
           + ITFV+LL ACSH+GL++EGQ  F  M  +YG+ P +KHY CMVD+ GRAG+ + AL+ 
Sbjct: 551 DHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKF 610

Query: 426 IESMTVEKDEGLWGALLGACRIHRRLDLAKRVASSLLELQPQNPGHYVLLSNIYANAGKW 485
           I+SM+++ D  +WGALL ACR+H  +DL K  +  L E++P++ G++VLLSN+YA+AGKW
Sbjct: 611 IKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKW 670

Query: 486 KDMAKTRDLMTKCGLKKIPGWTWIEVDEKLYQFSVGDKTHPRSSEIYEMLKRVGEKLELA 545
           + + + R +    GL+K PGW+ +EVD K+  F  G++THP   E+Y  L  +  KL++ 
Sbjct: 671 EGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELTALQAKLKMI 730

Query: 546 GYVPDTNYVLHDVDEEVKQGLLYAHSEKLAIAFGLIVIPGDTPIRITKNLRVCGDCHTFC 605
           GYVPD  +VL DV+++ K+ +L +HSE+LAIAF LI  P  T IRI KNLRVCGDCH+  
Sbjct: 731 GYVPDHRFVLQDVEDDEKEHILMSHSERLAIAFALIATPAKTTIRIFKNLRVCGDCHSVT 790

Query: 606 KFVSSIERRTIILRDANRFHHFKEGACSCRDYW 634
           KF+S I  R II+RD+NRFHHFK G CSC DYW
Sbjct: 791 KFISKITEREIIVRDSNRFHHFKNGVCSCGDYW 823

BLAST of CmoCh06G004880 vs. TAIR10
Match: AT3G46790.1 (AT3G46790.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 476.9 bits (1226), Expect = 2.0e-134
Identity = 232/617 (37.60%), Postives = 371/617 (60.13%), Query Frame = 1

Query: 28  KEASISVQFNVNNHSNEPNSSTQESQSSFLLYFHPKRFITLLLSC---RNLFQIRQVHGH 87
           KE  +     V +  + P+  T E                L+L C    +L    +VH H
Sbjct: 58  KEGKLKQAIRVLSQESSPSQQTYE---------------LLILCCGHRSSLSDALRVHRH 117

Query: 88  IASSGAFRNLAIANKLLFLYAQYGALEDAHELFDEMTERDSYSWSVIVGGYAKVKDFSSC 147
           I  +G+ ++  +A KL+ +Y+  G+++ A ++FD+  +R  Y W+ +             
Sbjct: 118 ILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEV 177

Query: 148 FWMFRELVRCGMPLDNYTLPIVIRACR----DLKDLQFGRVIHCATSKCGLDFDHFVCAS 207
             ++ ++ R G+  D +T   V++AC      +  L  G+ IH   ++ G     ++  +
Sbjct: 178 LGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTT 237

Query: 208 LVDMYARCKVIEDARQLFDKMPRRDLVTWTVMVGALAECSSAVESLTLFDRMRDE--GIV 267
           LVDMYAR   ++ A  +F  MP R++V+W+ M+   A+   A E+L  F  M  E     
Sbjct: 238 LVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSS 297

Query: 268 PDKVALVTVVYACAKLGAMNKARAIHDYI--NGTRYVLDVILGTAMIDMYAKCGSVDLAR 327
           P+ V +V+V+ ACA L A+ + + IH YI   G   +L VI  +A++ MY +CG +++ +
Sbjct: 298 PNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVI--SALVTMYGRCGKLEVGQ 357

Query: 328 EIFDQMQVKNVITWSAMIAAYGYHGQGGKALELFPMMLSSGILPNRITFVSLLYACSHAG 387
            +FD+M  ++V++W+++I++YG HG G KA+++F  ML++G  P  +TFVS+L ACSH G
Sbjct: 358 RVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEG 417

Query: 388 LIEEGQRFFASMWDEYGVRPDVKHYTCMVDLLGRAGRFDEALELIESMTVEKDEGLWGAL 447
           L+EEG+R F +MW ++G++P ++HY CMVDLLGRA R DEA ++++ M  E    +WG+L
Sbjct: 418 LVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSL 477

Query: 448 LGACRIHRRLDLAKRVASSLLELQPQNPGHYVLLSNIYANAGKWKDMAKTRDLMTKCGLK 507
           LG+CRIH  ++LA+R +  L  L+P+N G+YVLL++IYA A  W ++ + + L+   GL+
Sbjct: 478 LGSCRIHGNVELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDEVKRVKKLLEHRGLQ 537

Query: 508 KIPGWTWIEVDEKLYQFSVGDKTHPRSSEIYEMLKRVGEKLELAGYVPDTNYVLHDVDEE 567
           K+PG  W+EV  K+Y F   D+ +P   +I+  L ++ E ++  GY+P T  VL++++ E
Sbjct: 538 KLPGRCWMEVRRKMYSFVSVDEFNPLMEQIHAFLVKLAEDMKEKGYIPQTKGVLYELETE 597

Query: 568 VKQGLLYAHSEKLAIAFGLIVIPGDTPIRITKNLRVCGDCHTFCKFVSSIERRTIILRDA 627
            K+ ++  HSEKLA+AFGLI      PIRITKNLR+C DCH F KF+S    + I++RD 
Sbjct: 598 EKERIVLGHSEKLALAFGLINTSKGEPIRITKNLRLCEDCHLFTKFISKFMEKEILVRDV 657

Query: 628 NRFHHFKEGACSCRDYW 634
           NRFH FK G CSC DYW
Sbjct: 658 NRFHRFKNGVCSCGDYW 657

BLAST of CmoCh06G004880 vs. TAIR10
Match: AT2G33760.1 (AT2G33760.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 475.3 bits (1222), Expect = 5.8e-134
Identity = 231/561 (41.18%), Postives = 347/561 (61.85%), Query Frame = 1

Query: 77  QIRQVHGHIASSGAFRNLAIANKLLFLYAQYGALEDAHELFDEMTERDSYSWSVIVGGYA 136
           Q++QVH H+  +G  R+ ++  KL+ L     A+   H LF  +   D + ++ ++   +
Sbjct: 24  QLQQVHAHLIVTGYGRSRSLLTKLITLACSARAIAYTHLLFLSVPLPDDFLFNSVIKSTS 83

Query: 137 KVKDFSSCFWMFRELVRCGMPLDNYTLPIVIRACRDLKDLQFGRVIHCATSKCGLDFDHF 196
           K++    C   +R ++   +   NYT   VI++C DL  L+ G+ +HC     G   D +
Sbjct: 84  KLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFGLDTY 143

Query: 197 VCASLVDMYARCKVIEDARQLFDKMPRRDLVTWTVMVGALAECSSAVESLTLFDRMRDEG 256
           V A+LV  Y++C  +E ARQ+FD+MP + +V W  +V    +   A E++ +F +MR+ G
Sbjct: 144 VQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESG 203

Query: 257 IVPDKVALVTVVYACAKLGAMNKARAIHDYINGTRYVLDVILGTAMIDMYAKCGSVDLAR 316
             PD    V+++ ACA+ GA++    +H YI      L+V LGTA+I++Y++CG V  AR
Sbjct: 204 FEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKAR 263

Query: 317 EIFDQMQVKNVITWSAMIAAYGYHGQGGKALELFPMMLSS-GILPNRITFVSLLYACSHA 376
           E+FD+M+  NV  W+AMI+AYG HG G +A+ELF  M    G +PN +TFV++L AC+HA
Sbjct: 264 EVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSACAHA 323

Query: 377 GLIEEGQRFFASMWDEYGVRPDVKHYTCMVDLLGRAGRFDEALELIESMTV---EKDEGL 436
           GL+EEG+  +  M   Y + P V+H+ CMVD+LGRAG  DEA + I  +          L
Sbjct: 324 GLVEEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFLDEAYKFIHQLDATGKATAPAL 383

Query: 437 WGALLGACRIHRRLDLAKRVASSLLELQPQNPGHYVLLSNIYANAGKWKDMAKTRDLMTK 496
           W A+LGAC++HR  DL   +A  L+ L+P NPGH+V+LSNIYA +GK  +++  RD M +
Sbjct: 384 WTAMLGACKMHRNYDLGVEIAKRLIALEPDNPGHHVMLSNIYALSGKTDEVSHIRDGMMR 443

Query: 497 CGLKKIPGWTWIEVDEKLYQFSVGDKTHPRSSEIYEMLKRVGEKLELAGYVPDTNYVLHD 556
             L+K  G++ IEV+ K Y FS+GD++H  + EIY  L+ +  + +  GY P +  V+H 
Sbjct: 444 NNLRKQVGYSVIEVENKTYMFSMGDESHQETGEIYRYLETLISRCKEIGYAPVSEEVMHQ 503

Query: 557 VDEEVKQGLLYAHSEKLAIAFGLIVIPGDTPIRITKNLRVCGDCHTFCKFVSSIERRTII 616
           V+EE K+  L  HSEKLA+AFGL+    D  I I KNLR+C DCH+  K++S +  R I 
Sbjct: 504 VEEEEKEFALRYHSEKLAVAFGLLKTV-DVAITIVKNLRICEDCHSAFKYISIVSNRQIT 563

Query: 617 LRDANRFHHFKEGACSCRDYW 634
           +RD  RFHHF+ G+CSC DYW
Sbjct: 564 VRDKLRFHHFQNGSCSCLDYW 583

BLAST of CmoCh06G004880 vs. NCBI nr
Match: gi|659084389|ref|XP_008442861.1| (PREDICTED: pentatricopeptide repeat-containing protein At2g33760-like [Cucumis melo])

HSP 1 Score: 1067.0 bits (2758), Expect = 1.3e-308
Identity = 520/633 (82.15%), Postives = 560/633 (88.47%), Query Frame = 1

Query: 1   MLKSKSQIIFINNGKLRFSSASATTAVKEASISVQFNVNNHSNEPNSSTQESQSSFLLYF 60
           MLKSK Q IFIN+GKLRFSS         AS+S QF+VN +SNEP   TQES+SS +L++
Sbjct: 1   MLKSKCQHIFINHGKLRFSS---------ASLSWQFDVNCNSNEPTPCTQESESSHVLHY 60

Query: 61  HPKRFITLLLSCRNLFQIRQVHGHIASSGAFRNLAIANKLLFLYAQYGALEDAHELFDEM 120
            PKRF   LLSCRNLFQ+RQVH  IA++GAFRNLA+ANKLLFLY + GALEDA ELFD M
Sbjct: 61  DPKRFRNSLLSCRNLFQVRQVHAQIATNGAFRNLAVANKLLFLYVERGALEDAQELFDGM 120

Query: 121 TERDSYSWSVIVGGYAKVKDFSSCFWMFRELVRCGMPLDNYTLPIVIRACRDLKDLQFGR 180
           ++RD YSWS+IVGGYAKV DF SCFWMFREL+RCG PLD+Y  PIVIRACRDLKDL+ GR
Sbjct: 121 SKRDPYSWSIIVGGYAKVGDFFSCFWMFRELLRCGTPLDDYNAPIVIRACRDLKDLKCGR 180

Query: 181 VIHCATSKCGLDFDHFVCASLVDMYARCKVIEDARQLFDKMPRRDLVTWTVMVGALAECS 240
           +IHC T KCGLD+  FVCASLVDMYARCKVIEDARQ+F KM +RDL TWTVM+GALAE  
Sbjct: 181 LIHCITLKCGLDYGQFVCASLVDMYARCKVIEDARQIFVKMWKRDLATWTVMIGALAESG 240

Query: 241 SAVESLTLFDRMRDEGIVPDKVALVTVVYACAKLGAMNKARAIHDYINGTRYVLDVILGT 300
             VESL  FDRMRDEGIVPDKVALVTVVYACAKLGAMNKA+AIH YINGT Y LDVILGT
Sbjct: 241 VPVESLAFFDRMRDEGIVPDKVALVTVVYACAKLGAMNKAKAIHAYINGTGYSLDVILGT 300

Query: 301 AMIDMYAKCGSVDLAREIFDQMQVKNVITWSAMIAAYGYHGQGGKALELFPMMLSSGILP 360
           AMIDMYAKCGSVD AR IFD+MQV+NVITWSAMIAAYGYHGQG KALELFPMML  GILP
Sbjct: 301 AMIDMYAKCGSVDSARWIFDRMQVRNVITWSAMIAAYGYHGQGEKALELFPMMLGCGILP 360

Query: 361 NRITFVSLLYACSHAGLIEEGQRFFASMWDEYGVRPDVKHYTCMVDLLGRAGRFDEALEL 420
           NRITFVSLLYACSHAGLIEEGQRFF+SMWDEYGV PDVKHYTCMVDLLGRAGR DEALE+
Sbjct: 361 NRITFVSLLYACSHAGLIEEGQRFFSSMWDEYGVTPDVKHYTCMVDLLGRAGRLDEALEM 420

Query: 421 IESMTVEKDEGLWGALLGACRIHRRLDLAKRVASSLLELQPQNPGHYVLLSNIYANAGKW 480
           IE MTVEKDE LWGALLGACRIHRRLDLA+RVA+SL +LQ QNPGHYVLLSNIYANAGKW
Sbjct: 421 IEGMTVEKDEALWGALLGACRIHRRLDLAERVATSLHKLQSQNPGHYVLLSNIYANAGKW 480

Query: 481 KDMAKTRDLMTKCGLKKIPGWTWIEVDEKLYQFSVGDKTHPRSSEIYEMLKRVGEKLELA 540
            DMAK RDLMTK GL+KIPGWTWIEV+EKLYQF VGDKTHPRSSEIY+MLKR+GEKLELA
Sbjct: 481 DDMAKIRDLMTKSGLRKIPGWTWIEVNEKLYQFGVGDKTHPRSSEIYKMLKRIGEKLELA 540

Query: 541 GYVPDTNYVLHDVDEEVKQGLLYAHSEKLAIAFGLIVIPGDTPIRITKNLRVCGDCHTFC 600
           GY+PDTNY LHDVDEEVKQGLLYAHSEKLAIAFGL+VI    PIRITKNLRVCGDCHTFC
Sbjct: 541 GYLPDTNYALHDVDEEVKQGLLYAHSEKLAIAFGLLVISQGYPIRITKNLRVCGDCHTFC 600

Query: 601 KFVSSIERRTIILRDANRFHHFKEGACSCRDYW 634
           KFVS IE+RTII+RDA RFHHFKEG CSCRDYW
Sbjct: 601 KFVSFIEQRTIIVRDAKRFHHFKEGVCSCRDYW 624

BLAST of CmoCh06G004880 vs. NCBI nr
Match: gi|449462994|ref|XP_004149219.1| (PREDICTED: pentatricopeptide repeat-containing protein At4g21065-like [Cucumis sativus])

HSP 1 Score: 1025.4 bits (2650), Expect = 4.2e-296
Identity = 500/633 (78.99%), Postives = 554/633 (87.52%), Query Frame = 1

Query: 1   MLKSKSQIIFINNGKLRFSSASATTAVKEASISVQFNVNNHSNEPNSSTQESQSSFLLYF 60
           MLKSK   IFIN GKLRFSS         AS+S QF+VN +SNEP   +QES+ S +L++
Sbjct: 1   MLKSKCHHIFINYGKLRFSS---------ASLSWQFDVNCNSNEPTPCSQESECSHVLHY 60

Query: 61  HPKRFITLLLSCRNLFQIRQVHGHIASSGAFRNLAIANKLLFLYAQYGALEDAHELFDEM 120
             KRF + LLSCRNLFQ+RQVH  IA++GAFRNLA+ANKLL++Y + GALEDA ELFD M
Sbjct: 61  DTKRFRSSLLSCRNLFQVRQVHAQIATNGAFRNLAVANKLLYMYVERGALEDAQELFDGM 120

Query: 121 TERDSYSWSVIVGGYAKVKDFSSCFWMFRELVRCGMPLDNYTLPIVIRACRDLKDLQFGR 180
           ++R  YSWSVIVGGYAKV +F SCFWMFREL+R G PLD+Y+ P+VIRACRDLKDL+ GR
Sbjct: 121 SKRHPYSWSVIVGGYAKVGNFFSCFWMFRELLRSGAPLDDYSAPVVIRACRDLKDLKCGR 180

Query: 181 VIHCATSKCGLDFDHFVCASLVDMYARCKVIEDARQLFDKMPRRDLVTWTVMVGALAECS 240
           +IHC T KCGLD+ HFVCA+LVDMYARCKV+EDA Q+F KM +RDL TWTVM+GALAE  
Sbjct: 181 LIHCITLKCGLDYGHFVCATLVDMYARCKVVEDAHQIFVKMWKRDLATWTVMIGALAESG 240

Query: 241 SAVESLTLFDRMRDEGIVPDKVALVTVVYACAKLGAMNKARAIHDYINGTRYVLDVILGT 300
             VESL  FDRMR++GIVPDKVALVTVVYACAKLGAMNKA+AIH YINGT Y LDVILGT
Sbjct: 241 VPVESLVFFDRMRNQGIVPDKVALVTVVYACAKLGAMNKAKAIHAYINGTGYSLDVILGT 300

Query: 301 AMIDMYAKCGSVDLAREIFDQMQVKNVITWSAMIAAYGYHGQGGKALELFPMMLSSGILP 360
           AMIDMYAKCGSV+ AR IFD+MQV+NVITWSAMIAAYGYHGQG KALELFPMML SGILP
Sbjct: 301 AMIDMYAKCGSVESARWIFDRMQVRNVITWSAMIAAYGYHGQGEKALELFPMMLRSGILP 360

Query: 361 NRITFVSLLYACSHAGLIEEGQRFFASMWDEYGVRPDVKHYTCMVDLLGRAGRFDEALEL 420
           NRITFVSLLYACSHAGLIEEGQRFF+SMWDEYGV PDVKHYTCMVDLLGRAGR DEALE+
Sbjct: 361 NRITFVSLLYACSHAGLIEEGQRFFSSMWDEYGVTPDVKHYTCMVDLLGRAGRLDEALEM 420

Query: 421 IESMTVEKDEGLWGALLGACRIHRRLDLAKRVASSLLELQPQNPGHYVLLSNIYANAGKW 480
           IE M VEKDE LWGALLGACRIHR LDLA+RVA SLL+LQ Q PGHYVLLSNIYANAGKW
Sbjct: 421 IEGMPVEKDEVLWGALLGACRIHRHLDLAERVARSLLKLQSQKPGHYVLLSNIYANAGKW 480

Query: 481 KDMAKTRDLMTKCGLKKIPGWTWIEVDEKLYQFSVGDKTHPRSSEIYEMLKRVGEKLELA 540
           +DMAKTRDLMTK GL+KIPG TWIEV EKLYQF VGDKTHPRS+EIY+MLKR+GEKLE+A
Sbjct: 481 EDMAKTRDLMTKGGLRKIPGRTWIEVGEKLYQFGVGDKTHPRSNEIYKMLKRLGEKLEVA 540

Query: 541 GYVPDTNYVLHDVDEEVKQGLLYAHSEKLAIAFGLIVIPGDTPIRITKNLRVCGDCHTFC 600
           GY PDTN VL+DVDEEVKQGLLY+HSEKLAIAFGL+V+P   PIRITKNLRVCGDCHTFC
Sbjct: 541 GYHPDTNDVLYDVDEEVKQGLLYSHSEKLAIAFGLLVLPQGHPIRITKNLRVCGDCHTFC 600

Query: 601 KFVSSIERRTIILRDANRFHHFKEGACSCRDYW 634
           KFVS IE++TII+RDA RFHHFKEG CSCRDYW
Sbjct: 601 KFVSLIEQKTIIVRDAKRFHHFKEGVCSCRDYW 624

BLAST of CmoCh06G004880 vs. NCBI nr
Match: gi|731400928|ref|XP_010654106.1| (PREDICTED: pentatricopeptide repeat-containing protein At2g33760-like [Vitis vinifera])

HSP 1 Score: 908.3 bits (2346), Expect = 7.6e-261
Identity = 435/626 (69.49%), Postives = 511/626 (81.63%), Query Frame = 1

Query: 8   IIFINNGKLRFSSASATTAVKEASISVQFNVNNHSNEPNSSTQESQSSFLLYFHPKRFIT 67
           +I + NG+L F +A +   + E+ I  Q    +  N  N   + S+  FL   +PK +++
Sbjct: 9   LIALRNGRLDFCTAPSVFPIVESVIETQIRQTS-LNLFNRVEESSKFHFLQRLNPKFYLS 68

Query: 68  LLLSCRNLFQIRQVHGHIASSGAFRNLAIANKLLFLYAQYGALEDAHELFDEMTERDSYS 127
            L++CRNL Q+RQVH   +  G  +NL +ANKL+  Y+ Y AL+DA+ LFD M  RDS S
Sbjct: 69  ALVNCRNLTQVRQVHAQASVHGMLQNLIVANKLVHFYSYYRALDDAYGLFDGMCVRDSVS 128

Query: 128 WSVIVGGYAKVKDFSSCFWMFRELVRCGMPLDNYTLPIVIRACRDLKDLQFGRVIHCATS 187
           WSV+VGG+AKV D+ +CF  FREL+RCG   DNYTLP VIRACRDLK+LQ GR+IH    
Sbjct: 129 WSVMVGGFAKVGDYMNCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVY 188

Query: 188 KCGLDFDHFVCASLVDMYARCKVIEDARQLFDKMPRRDLVTWTVMVGALAECSSAVESLT 247
           K GLD DHFVCA+LVDMY +C+ IEDAR LFDKMP RDLVTWTVM+G  AEC +A ESL 
Sbjct: 189 KFGLDLDHFVCAALVDMYGKCREIEDARFLFDKMPERDLVTWTVMIGGYAECGNANESLV 248

Query: 248 LFDRMRDEGIVPDKVALVTVVYACAKLGAMNKARAIHDYINGTRYVLDVILGTAMIDMYA 307
           LFD+MR+EG+VPDKVA+VTVV+ACAKLGAM+KAR I DYI   ++ LDVILGTAMIDM+A
Sbjct: 249 LFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHA 308

Query: 308 KCGSVDLAREIFDQMQVKNVITWSAMIAAYGYHGQGGKALELFPMMLSSGILPNRITFVS 367
           KCG V+ AREIFD+M+ KNVI+WSAMIAAYGYHGQG KAL+LFPMML SGILPN+IT VS
Sbjct: 309 KCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVS 368

Query: 368 LLYACSHAGLIEEGQRFFASMWDEYGVRPDVKHYTCMVDLLGRAGRFDEALELIESMTVE 427
           LLYACSHAGL+EEG RFF+ MW++Y VR DVKHYTC+VDLLGRAGR DEAL+LIESMTVE
Sbjct: 369 LLYACSHAGLVEEGLRFFSLMWEDYSVRADVKHYTCVVDLLGRAGRLDEALKLIESMTVE 428

Query: 428 KDEGLWGALLGACRIHRRLDLAKRVASSLLELQPQNPGHYVLLSNIYANAGKWKDMAKTR 487
           KDEGLWGA LGACR H+ + LA++ A+SLLELQPQNPGHY+LLSNIYANAG+W+D+AKTR
Sbjct: 429 KDEGLWGAFLGACRTHKDVVLAEKAATSLLELQPQNPGHYILLSNIYANAGRWEDVAKTR 488

Query: 488 DLMTKCGLKKIPGWTWIEVDEKLYQFSVGDKTHPRSSEIYEMLKRVGEKLELAGYVPDTN 547
           DLM++  LKKIPGWTWIEVD K +QFSVGD THPRS EIYEMLK +G KLEL GYVPDTN
Sbjct: 489 DLMSQRRLKKIPGWTWIEVDNKSHQFSVGDTTHPRSKEIYEMLKSLGNKLELVGYVPDTN 548

Query: 548 YVLHDVDEEVKQGLLYAHSEKLAIAFGLIVIPGDTPIRITKNLRVCGDCHTFCKFVSSIE 607
           +VLHDVDEE+K G+LY+HSEKLAIAFGLI  P  TPIRI KNLRVCGDCHTFCK VS+I 
Sbjct: 549 FVLHDVDEELKIGILYSHSEKLAIAFGLIATPEHTPIRIIKNLRVCGDCHTFCKLVSAIT 608

Query: 608 RRTIILRDANRFHHFKEGACSCRDYW 634
            R II+RDANRFHHFKEGACSC DYW
Sbjct: 609 GRVIIVRDANRFHHFKEGACSCGDYW 633

BLAST of CmoCh06G004880 vs. NCBI nr
Match: gi|985453519|ref|XP_015386876.1| (PREDICTED: pentatricopeptide repeat-containing protein At2g33760-like [Citrus sinensis])

HSP 1 Score: 891.0 bits (2301), Expect = 1.2e-255
Identity = 430/633 (67.93%), Postives = 504/633 (79.62%), Query Frame = 1

Query: 5   KSQIIFINNGKLRFSSASATTAVKEASISVQFNVNNHSNEPNSSTQESQS----SFLLYF 64
           K   I   + K+RF S+S T A+           + H   P +     Q+     F    
Sbjct: 6   KHGFILSTSAKIRFFSSSTTAAIP-------LEPHGHEQNPINPRAPMQTVPDCQFTRSV 65

Query: 65  HPKRFITLLLSCRNLFQIRQVHGHIASSGAFRNLAIANKLLFLYAQYGALEDAHELFDEM 124
            PK  I+ LLSCRN+FQIRQVH  I +SG   NL +ANKLL++YA + AL DAH LF+ M
Sbjct: 66  DPKFIISSLLSCRNIFQIRQVHAQIVASGTLTNLIVANKLLYIYALHKALTDAHALFNGM 125

Query: 125 TERDSYSWSVIVGGYAKVKDFSSCFWMFRELVRCGMPLDNYTLPIVIRACRDLKDLQFGR 184
            ERDS SWSV+VGG++KV DF +CF  FRE +RCGM LD+YTLP VIRACRD KD+  GR
Sbjct: 126 KERDSVSWSVMVGGFSKVGDFINCFETFREFIRCGMQLDSYTLPFVIRACRDRKDIVMGR 185

Query: 185 VIHCATSKCGLDFDHFVCASLVDMYARCKVIEDARQLFDKMPRRDLVTWTVMVGALAECS 244
           +IH    K GLD D FVCA+LVDMYA+CKVI+DARQLFD+MP RDLVTWTVM+GA AE  
Sbjct: 186 LIHDIVLKSGLDIDQFVCAALVDMYAKCKVIDDARQLFDQMPSRDLVTWTVMMGACAESG 245

Query: 245 SAVESLTLFDRMRDEGIVPDKVALVTVVYACAKLGAMNKARAIHDYINGTRYVLDVILGT 304
           +A ES  LF+RMR  G+V D  A+V+VVYACAKLG++ KAR +HD++   +++LDVILGT
Sbjct: 246 NANESWDLFERMRGAGVVLDNTAMVSVVYACAKLGSIQKARLVHDFLTRNKFLLDVILGT 305

Query: 305 AMIDMYAKCGSVDLAREIFDQMQVKNVITWSAMIAAYGYHGQGGKALELFPMMLSSGILP 364
           A+IDMYAKCGS+D AREIFD+M+ KNVI+WSAMIAAYGYHGQG KAL+LFPMMLSS +LP
Sbjct: 306 AVIDMYAKCGSIDSAREIFDRMRQKNVISWSAMIAAYGYHGQGKKALDLFPMMLSSRVLP 365

Query: 365 NRITFVSLLYACSHAGLIEEGQRFFASMWDEYGVRPDVKHYTCMVDLLGRAGRFDEALEL 424
           NRITFVSLLYACSH GL+E+G R F+SMWD++ VRPDVKHYTCMVDLLGRAGR DEAL+L
Sbjct: 366 NRITFVSLLYACSHTGLVEQGLRLFSSMWDDFAVRPDVKHYTCMVDLLGRAGRLDEALKL 425

Query: 425 IESMTVEKDEGLWGALLGACRIHRRLDLAKRVASSLLELQPQNPGHYVLLSNIYANAGKW 484
           IESM+VEKDEGLWGALLGACRIH+ +DLA+  A SLLELQPQNPGHYVLLSNIYANAG+W
Sbjct: 426 IESMSVEKDEGLWGALLGACRIHKNVDLAEMAAKSLLELQPQNPGHYVLLSNIYANAGRW 485

Query: 485 KDMAKTRDLMTKCGLKKIPGWTWIEVDEKLYQFSVGDKTHPRSSEIYEMLKRVGEKLELA 544
           +D+AK RDLMT+  LKKIPGWTWIEV+ K++QFSVGD THP+S EIY ML  + EKLELA
Sbjct: 486 QDVAKIRDLMTRRRLKKIPGWTWIEVENKIHQFSVGDTTHPQSEEIYRMLVTLSEKLELA 545

Query: 545 GYVPDTNYVLHDVDEEVKQGLLYAHSEKLAIAFGLIVIPGDTPIRITKNLRVCGDCHTFC 604
           GY+PDTN+ LHDVDEEVK G LY+HSEKLAIAFGLI  P  T IRI KNLRVCGDCH+F 
Sbjct: 546 GYIPDTNFELHDVDEEVKVGNLYSHSEKLAIAFGLIATPEGTHIRIMKNLRVCGDCHSFI 605

Query: 605 KFVSSIERRTIILRDANRFHHFKEGACSCRDYW 634
           K VS+I RR II+RDANRFHHF+ GACSCRDYW
Sbjct: 606 KHVSAITRRVIIVRDANRFHHFEGGACSCRDYW 631

BLAST of CmoCh06G004880 vs. NCBI nr
Match: gi|567875143|ref|XP_006430161.1| (hypothetical protein CICLE_v10013825mg [Citrus clementina])

HSP 1 Score: 889.8 bits (2298), Expect = 2.8e-255
Identity = 417/572 (72.90%), Postives = 485/572 (84.79%), Query Frame = 1

Query: 62  PKRFITLLLSCRNLFQIRQVHGHIASSGAFRNLAIANKLLFLYAQYGALEDAHELFDEMT 121
           PK FI+ LLSCRN+FQIRQVH  I + G   NL +ANKLL++YA + AL DAH LF+ M 
Sbjct: 15  PKFFISSLLSCRNIFQIRQVHAQIVAGGTLTNLIVANKLLYIYALHKALTDAHALFNGMK 74

Query: 122 ERDSYSWSVIVGGYAKVKDFSSCFWMFRELVRCGMPLDNYTLPIVIRACRDLKDLQFGRV 181
           ERDS SWSV+VGG++KV DF +CF  FRE +RCGM LD+YTLP VIRACRD KD+  GR+
Sbjct: 75  ERDSVSWSVMVGGFSKVADFINCFETFREFIRCGMQLDSYTLPFVIRACRDRKDIVMGRL 134

Query: 182 IHCATSKCGLDFDHFVCASLVDMYARCKVIEDARQLFDKMPRRDLVTWTVMVGALAECSS 241
           IH    K GLD D FVCA+LVDMYA+CKVI+DARQLFD+MP RDLVTWTVM+GA AE  +
Sbjct: 135 IHDIVLKSGLDIDQFVCAALVDMYAKCKVIDDARQLFDQMPTRDLVTWTVMIGACAESGN 194

Query: 242 AVESLTLFDRMRDEGIVPDKVALVTVVYACAKLGAMNKARAIHDYINGTRYVLDVILGTA 301
           A ES  LF+RMR EG+V D  A+V+VVYACAKLG+++KAR +HD++   +++LDVILGTA
Sbjct: 195 ANESWDLFERMRGEGVVLDNTAMVSVVYACAKLGSIHKARLVHDFLTRNKFLLDVILGTA 254

Query: 302 MIDMYAKCGSVDLAREIFDQMQVKNVITWSAMIAAYGYHGQGGKALELFPMMLSSGILPN 361
           +IDMYAKCGS+D AREIF++M+ KNVI+WSAMIAAYGYHGQG KAL+LFPMMLSS +LPN
Sbjct: 255 VIDMYAKCGSIDSAREIFERMRQKNVISWSAMIAAYGYHGQGKKALDLFPMMLSSRVLPN 314

Query: 362 RITFVSLLYACSHAGLIEEGQRFFASMWDEYGVRPDVKHYTCMVDLLGRAGRFDEALELI 421
           RITFVSLLYACSH GL+EEG R F+SMWD++ VRPDVKHYTCMVDLLGRAGR DEAL+LI
Sbjct: 315 RITFVSLLYACSHTGLVEEGLRLFSSMWDDFAVRPDVKHYTCMVDLLGRAGRLDEALKLI 374

Query: 422 ESMTVEKDEGLWGALLGACRIHRRLDLAKRVASSLLELQPQNPGHYVLLSNIYANAGKWK 481
           ESM+VEKDEGLWGALLGACRIH+ +DLA+  A SLLE QPQNPGHYVLLSNIYANAG+W+
Sbjct: 375 ESMSVEKDEGLWGALLGACRIHKNVDLAEMAAKSLLERQPQNPGHYVLLSNIYANAGRWQ 434

Query: 482 DMAKTRDLMTKCGLKKIPGWTWIEVDEKLYQFSVGDKTHPRSSEIYEMLKRVGEKLELAG 541
           D+AK RDLMT+  LKKIPGWTWIEV+ K++QFSVGD THP+S EIY ML  + EKLELAG
Sbjct: 435 DVAKIRDLMTRRRLKKIPGWTWIEVENKIHQFSVGDSTHPQSEEIYRMLVTLSEKLELAG 494

Query: 542 YVPDTNYVLHDVDEEVKQGLLYAHSEKLAIAFGLIVIPGDTPIRITKNLRVCGDCHTFCK 601
           Y+PDTN+ LHDVDEEVK G LY+HSEKLAIAFGLI  P  T IRI KNLRVCGDCH+F K
Sbjct: 495 YIPDTNFELHDVDEEVKVGNLYSHSEKLAIAFGLIATPEGTHIRIMKNLRVCGDCHSFIK 554

Query: 602 FVSSIERRTIILRDANRFHHFKEGACSCRDYW 634
            VS+I RR II+RDANRFHHF+ GACSCRDYW
Sbjct: 555 HVSAITRRVIIVRDANRFHHFEGGACSCRDYW 586

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
PP147_ARATH5.8e-13640.85Pentatricopeptide repeat-containing protein At2g03880, mitochondrial OS=Arabidop... [more]
PPR21_ARATH1.7e-13539.63Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidop... [more]
PP296_ARATH1.4e-13441.71Pentatricopeptide repeat-containing protein At3g63370, chloroplastic OS=Arabidop... [more]
PP348_ARATH7.1e-13440.31Pentatricopeptide repeat-containing protein At4g33990 OS=Arabidopsis thaliana GN... [more]
PP265_ARATH3.5e-13337.60Pentatricopeptide repeat-containing protein At3g46790, chloroplastic OS=Arabidop... [more]
Match NameE-valueIdentityDescription
A0A0A0LE23_CUCSA3.0e-29678.99Uncharacterized protein OS=Cucumis sativus GN=Csa_3G777570 PE=4 SV=1[more]
V4T1L8_9ROSI1.9e-25572.90Uncharacterized protein OS=Citrus clementina GN=CICLE_v10013825mg PE=4 SV=1[more]
A5C1S9_VITVI4.9e-25173.57Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_014227 PE=4 SV=1[more]
A0A0D2MF68_GOSRA3.9e-24865.52Uncharacterized protein (Fragment) OS=Gossypium raimondii GN=B456_002G238700 PE=... [more]
I1JGM4_SOYBN8.2e-24671.65Uncharacterized protein OS=Glycine max GN=GLYMA_02G201800 PE=4 SV=2[more]
Match NameE-valueIdentityDescription
AT2G03880.13.3e-13740.85 Pentatricopeptide repeat (PPR) superfamily protein[more]
AT1G08070.19.5e-13739.63 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT4G33990.14.0e-13540.31 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT3G46790.12.0e-13437.60 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT2G33760.15.8e-13441.18 Pentatricopeptide repeat (PPR) superfamily protein[more]
Match NameE-valueIdentityDescription
gi|659084389|ref|XP_008442861.1|1.3e-30882.15PREDICTED: pentatricopeptide repeat-containing protein At2g33760-like [Cucumis m... [more]
gi|449462994|ref|XP_004149219.1|4.2e-29678.99PREDICTED: pentatricopeptide repeat-containing protein At4g21065-like [Cucumis s... [more]
gi|731400928|ref|XP_010654106.1|7.6e-26169.49PREDICTED: pentatricopeptide repeat-containing protein At2g33760-like [Vitis vin... [more]
gi|985453519|ref|XP_015386876.1|1.2e-25567.93PREDICTED: pentatricopeptide repeat-containing protein At2g33760-like [Citrus si... [more]
gi|567875143|ref|XP_006430161.1|2.8e-25572.90hypothetical protein CICLE_v10013825mg [Citrus clementina][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_repeat
IPR011990TPR-like_helical_dom_sf
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0005515protein binding
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008152 metabolic process
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0008568 microtubule-severing ATPase activity
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh06G004880.1CmoCh06G004880.1mRNA


Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 200..225
score: 0.03coord: 126..155
score: 0.0033coord: 227..257
score: 0.0018coord: 99..123
score: 0
IPR002885Pentatricopeptide repeatPFAMPF12854PPR_1coord: 393..425
score: 1.
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 325..372
score: 1.
IPR002885Pentatricopeptide repeatTIGRFAMsTIGR00756TIGR00756coord: 300..326
score: 8.5E-5coord: 227..260
score: 1.5E-5coord: 197..226
score: 5.8E-4coord: 328..361
score: 2.4E-5coord: 401..425
score: 2.
IPR002885Pentatricopeptide repeatPROFILEPS51375PPRcoord: 429..459
score: 5.393coord: 361..396
score: 8.758coord: 225..259
score: 10.939coord: 295..325
score: 8.714coord: 93..123
score: 7.98coord: 463..497
score: 7.202coord: 124..158
score: 9.525coord: 194..224
score: 8.835coord: 260..294
score: 6.127coord: 397..427
score: 9.372coord: 326..360
score: 11
IPR011990Tetratricopeptide-like helical domainGENE3DG3DSA:1.25.40.10coord: 98..141
score: 9.7E-7coord: 197..228
score: 9.7E-7coord: 398..483
score: 9.
IPR011990Tetratricopeptide-like helical domainunknownSSF48452TPR-likecoord: 104..464
score: 6.4
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 65..504
score: 2.6E

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh06G004880Cucurbita pepo (Zucchini)cmocpeB761
CmoCh06G004880Cucurbita pepo (Zucchini)cmocpeB774
CmoCh06G004880Cucurbita pepo (Zucchini)cmocpeB782
CmoCh06G004880Cucurbita pepo (Zucchini)cmocpeB783
CmoCh06G004880Cucurbita pepo (Zucchini)cmocpeB797
CmoCh06G004880Bottle gourd (USVL1VR-Ls)cmolsiB737
CmoCh06G004880Bottle gourd (USVL1VR-Ls)cmolsiB740
CmoCh06G004880Cucumber (Gy14) v2cgybcmoB130
CmoCh06G004880Cucumber (Gy14) v2cgybcmoB402
CmoCh06G004880Cucumber (Gy14) v2cgybcmoB833
CmoCh06G004880Cucumber (Gy14) v2cgybcmoB837
CmoCh06G004880Melon (DHL92) v3.6.1cmomedB856
CmoCh06G004880Melon (DHL92) v3.6.1cmomedB867
CmoCh06G004880Silver-seed gourdcarcmoB0208
CmoCh06G004880Silver-seed gourdcarcmoB0337
CmoCh06G004880Silver-seed gourdcarcmoB0351
CmoCh06G004880Silver-seed gourdcarcmoB0562
CmoCh06G004880Silver-seed gourdcarcmoB1099
CmoCh06G004880Silver-seed gourdcarcmoB1239
CmoCh06G004880Cucumber (Chinese Long) v3cmocucB0951
CmoCh06G004880Cucumber (Chinese Long) v3cmocucB0979
CmoCh06G004880Cucumber (Chinese Long) v3cmocucB0982
CmoCh06G004880Watermelon (97103) v2cmowmbB811
CmoCh06G004880Watermelon (97103) v2cmowmbB827
CmoCh06G004880Watermelon (97103) v2cmowmbB832
CmoCh06G004880Wax gourdcmowgoB0988
CmoCh06G004880Wax gourdcmowgoB1032
CmoCh06G004880Cucurbita moschata (Rifu)cmocmoB222
CmoCh06G004880Cucurbita moschata (Rifu)cmocmoB423
CmoCh06G004880Cucurbita moschata (Rifu)cmocmoB454
CmoCh06G004880Cucurbita moschata (Rifu)cmocmoB483
CmoCh06G004880Cucumber (Gy14) v1cgycmoB0149
CmoCh06G004880Cucumber (Gy14) v1cgycmoB0536
CmoCh06G004880Cucurbita maxima (Rimu)cmacmoB268
CmoCh06G004880Cucurbita maxima (Rimu)cmacmoB570
CmoCh06G004880Cucurbita maxima (Rimu)cmacmoB665
CmoCh06G004880Cucurbita maxima (Rimu)cmacmoB874
CmoCh06G004880Wild cucumber (PI 183967)cmocpiB810
CmoCh06G004880Wild cucumber (PI 183967)cmocpiB838
CmoCh06G004880Wild cucumber (PI 183967)cmocpiB842
CmoCh06G004880Cucumber (Chinese Long) v2cmocuB828
CmoCh06G004880Cucumber (Chinese Long) v2cmocuB832
CmoCh06G004880Melon (DHL92) v3.5.1cmomeB754
CmoCh06G004880Melon (DHL92) v3.5.1cmomeB763
CmoCh06G004880Watermelon (Charleston Gray)cmowcgB739
CmoCh06G004880Watermelon (Charleston Gray)cmowcgB742
CmoCh06G004880Watermelon (97103) v1cmowmB797
CmoCh06G004880Watermelon (97103) v1cmowmB799