CmoCh04G012120.1 (mRNA) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh04G012120.1
Type	mRNA
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	17.4 kDa class I heat shock family protein
Location	Cmo_Chr04 : 6168330 .. 6168779 (-)
Sequence length	450

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACGTCGCTGATTCCAAGCATTTTCGGTGGGCGTAGGAACAACAACTCGGACCCCATGTCATTGTCATTGTCATTGGATGTTTGGGATCCATTTGGTGGGGACACCTCTGCTATGGCCAACACTCGCATAGACTGGAAAGAGACCCCAGAAGCCCACATCTTCAAGGCCGATCTTCCGGGGATGAAGAAGGAGGAAGTAAAAGTAGAAGTGGAAGAAGGCAGAGTTCTGCAGATCAGTGGAGAAAGGAGCAAAGAAAAGGAGGAGAAGAATGATAAATGGCACAGAGTGGAACGAAGCAGTGGGAAGTTCATGAGGAGATTTAGGCTGCCGGAGAACGCTAAAGTTGATGAGGTGAAGGCTAGCATCGAGAATGGAGTTCTCACTGTGAGGGTGCCTAAGACGAAAGAGAAGAAGCCTGAAATCAGATCCATTGAAATCTCAGGCTAA

mRNA sequence

ATGACGTCGCTGATTCCAAGCATTTTCGGTGGGCGTAGGAACAACAACTCGGACCCCATGTCATTGTCATTGTCATTGGATGTTTGGGATCCATTTGGTGGGGACACCTCTGCTATGGCCAACACTCGCATAGACTGGAAAGAGACCCCAGAAGCCCACATCTTCAAGGCCGATCTTCCGGGGATGAAGAAGGAGGAAGTAAAAGTAGAAGTGGAAGAAGGCAGAGTTCTGCAGATCAGTGGAGAAAGGAGCAAAGAAAAGGAGGAGAAGAATGATAAATGGCACAGAGTGGAACGAAGCAGTGGGAAGTTCATGAGGAGATTTAGGCTGCCGGAGAACGCTAAAGTTGATGAGGTGAAGGCTAGCATCGAGAATGGAGTTCTCACTGTGAGGGTGCCTAAGACGAAAGAGAAGAAGCCTGAAATCAGATCCATTGAAATCTCAGGCTAA

Coding sequence (CDS)

ATGACGTCGCTGATTCCAAGCATTTTCGGTGGGCGTAGGAACAACAACTCGGACCCCATGTCATTGTCATTGTCATTGGATGTTTGGGATCCATTTGGTGGGGACACCTCTGCTATGGCCAACACTCGCATAGACTGGAAAGAGACCCCAGAAGCCCACATCTTCAAGGCCGATCTTCCGGGGATGAAGAAGGAGGAAGTAAAAGTAGAAGTGGAAGAAGGCAGAGTTCTGCAGATCAGTGGAGAAAGGAGCAAAGAAAAGGAGGAGAAGAATGATAAATGGCACAGAGTGGAACGAAGCAGTGGGAAGTTCATGAGGAGATTTAGGCTGCCGGAGAACGCTAAAGTTGATGAGGTGAAGGCTAGCATCGAGAATGGAGTTCTCACTGTGAGGGTGCCTAAGACGAAAGAGAAGAAGCCTGAAATCAGATCCATTGAAATCTCAGGCTAA

Homology

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BLAST of CmoCh04G012120.1 vs. Swiss-Prot
Match: HSP11_DAUCA (17.8 kDa class I heat shock protein OS=Daucus carota PE=3 SV=1)

HSP 1 Score: 219.2 bits (557), Expect = 3.1e-56
Identity = 112/160 (70.00%), Postives = 131/160 (81.88%), Query Frame = 1


Query: 3   SLIPSIFGGRRNNNSDPMSLSLSLDVWDPF-------------GGDTSAMANTRIDWKET 62
           S+IPS FGGRR+N  DP SL    DVWDPF             G +T+A  NT IDWKET
Sbjct: 2   SIIPSFFGGRRSNVFDPFSL----DVWDPFKDFPLVTSSASEFGKETAAFVNTHIDWKET 61

Query: 63  PEAHIFKADLPGMKKEEVKVEVEEGRVLQISGERSKEKEEKNDKWHRVERSSGKFMRRFR 122
           P+AH+FKADLPG+KKEEVKVE+EEG+VLQISGER+KEKEEKNDKWHRVERSSGKF+RRFR
Sbjct: 62  PQAHVFKADLPGLKKEEVKVELEEGKVLQISGERNKEKEEKNDKWHRVERSSGKFLRRFR 121

Query: 123 LPENAKVDEVKASIENGVLTVRVPKTKEKKPEIRSIEISG 150
           LPENAKVDEVKA++ NGV+TV VPK + KKPE+++I+ISG
Sbjct: 122 LPENAKVDEVKAAMANGVVTVTVPKVEIKKPEVKAIDISG 157

[Close]

BLAST of CmoCh04G012120.1 vs. Swiss-Prot
Match: HS181_ARATH (18.1 kDa class I heat shock protein OS=Arabidopsis thaliana GN=HSP18.1 PE=1 SV=1)

HSP 1 Score: 215.3 bits (547), Expect = 4.5e-55
Identity = 112/162 (69.14%), Postives = 128/162 (79.01%), Query Frame = 1


Query: 3   SLIPSIFGGRRNNNSDPMSLSLSLDVWDPFGG---------------DTSAMANTRIDWK 62
           SLIPSIFGGRR+N  DP S     D+WDPF G               D +A  N R+DWK
Sbjct: 2   SLIPSIFGGRRSNVFDPFSQ----DLWDPFEGFFTPSSALANASTARDVAAFTNARVDWK 61

Query: 63  ETPEAHIFKADLPGMKKEEVKVEVEEGRVLQISGERSKEKEEKNDKWHRVERSSGKFMRR 122
           ETPEAH+FKADLPG+KKEEVKVEVE+  VLQISGERSKE EEKNDKWHRVER+SGKFMRR
Sbjct: 62  ETPEAHVFKADLPGLKKEEVKVEVEDKNVLQISGERSKENEEKNDKWHRVERASGKFMRR 121

Query: 123 FRLPENAKVDEVKASIENGVLTVRVPKTKEKKPEIRSIEISG 150
           FRLPENAK++EVKA++ENGVLTV VPK  EKKP+++SI+ISG
Sbjct: 122 FRLPENAKMEEVKATMENGVLTVVVPKAPEKKPQVKSIDISG 159

[Close]

BLAST of CmoCh04G012120.1 vs. Swiss-Prot
Match: HSP12_DAUCA (18.0 kDa class I heat shock protein OS=Daucus carota PE=3 SV=1)

HSP 1 Score: 213.4 bits (542), Expect = 1.7e-54
Identity = 111/162 (68.52%), Postives = 128/162 (79.01%), Query Frame = 1


Query: 3   SLIPSIFGGRRNNNSDPMSLSLSLDVWDPF---------------GGDTSAMANTRIDWK 62
           S+IPS FG RR+N  +P SL    D+WDPF               G +T+A ANT IDWK
Sbjct: 2   SIIPSFFGSRRSNVLNPFSL----DIWDPFQDYPLITSSGTSSEFGKETAAFANTHIDWK 61

Query: 63  ETPEAHIFKADLPGMKKEEVKVEVEEGRVLQISGERSKEKEEKNDKWHRVERSSGKFMRR 122
           ETP+AH+FKADLPG+KKEEVKVEVEEG+VLQISGER+KEKEEKN+KWHRVE SSGKF+RR
Sbjct: 62  ETPQAHVFKADLPGLKKEEVKVEVEEGKVLQISGERNKEKEEKNNKWHRVEFSSGKFLRR 121

Query: 123 FRLPENAKVDEVKASIENGVLTVRVPKTKEKKPEIRSIEISG 150
           FRLPENA VDEVKA +ENGVLTV VPK + KKPE++SI ISG
Sbjct: 122 FRLPENANVDEVKAGMENGVLTVTVPKVEMKKPEVKSIHISG 159

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BLAST of CmoCh04G012120.1 vs. Swiss-Prot
Match: HSP12_MEDSA (18.2 kDa class I heat shock protein OS=Medicago sativa GN=HSP18.2 PE=2 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 2.2e-54
Identity = 110/161 (68.32%), Postives = 129/161 (80.12%), Query Frame = 1


Query: 3   SLIPSIFGGRRNNNSDPMSLSLSLDVWDPFGG--------------DTSAMANTRIDWKE 62
           SLIPS FGGRR+N  DP SL    DVWDPF                + SA  +TR+DWKE
Sbjct: 2   SLIPSFFGGRRSNVFDPFSL----DVWDPFKDFPFNNSALSASFPRENSAFVSTRVDWKE 61

Query: 63  TPEAHIFKADLPGMKKEEVKVEVEEGRVLQISGERSKEKEEKNDKWHRVERSSGKFMRRF 122
           TPEAH+FKADLPGMKKEEVKVE+E+ RVLQISGERS EKE+KND+WHR+ERSSGKFMRRF
Sbjct: 62  TPEAHVFKADLPGMKKEEVKVEIEDDRVLQISGERSVEKEDKNDQWHRLERSSGKFMRRF 121

Query: 123 RLPENAKVDEVKASIENGVLTVRVPKTKEKKPEIRSIEISG 150
           RLPENAK+D+VKA++ENGVLTV VPK + KKPE+++I+ISG
Sbjct: 122 RLPENAKMDQVKAAMENGVLTVTVPKEEVKKPEVKTIDISG 158

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BLAST of CmoCh04G012120.1 vs. Swiss-Prot
Match: HSP13_SOYBN (17.5 kDa class I heat shock protein OS=Glycine max GN=HSP17.5-M PE=3 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 2.2e-54
Identity = 108/156 (69.23%), Postives = 128/156 (82.05%), Query Frame = 1


Query: 3   SLIPSIFGGRRNNNSDPMSLSLSLDVWDPF---------GGDTSAMANTRIDWKETPEAH 62
           SLIPSIFGGRR+N  DP SL    DVWDPF           + SA  NTR+DWKETPEAH
Sbjct: 2   SLIPSIFGGRRSNVFDPFSL----DVWDPFKDFHFPTSLSAENSAFVNTRVDWKETPEAH 61

Query: 63  IFKADLPGMKKEEVKVEVEEGRVLQISGERSKEKEEKNDKWHRVERSSGKFMRRFRLPEN 122
           +F+AD+PG+KKEEVKV++E+ RVLQISGER+ EKE+KND WHRVERSSG FMRRFRLPEN
Sbjct: 62  VFEADIPGLKKEEVKVQIEDDRVLQISGERNLEKEDKNDTWHRVERSSGNFMRRFRLPEN 121

Query: 123 AKVDEVKASIENGVLTVRVPKTKEKKPEIRSIEISG 150
           AKV++VKAS+ENGVLTV VPK + KKP++++IEISG
Sbjct: 122 AKVEQVKASMENGVLTVTVPKEEVKKPDVKAIEISG 153

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BLAST of CmoCh04G012120.1 vs. TrEMBL
Match: A0A0A0KLU0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G197620 PE=3 SV=1)

HSP 1 Score: 230.3 bits (586), Expect = 1.5e-57
Identity = 120/162 (74.07%), Postives = 135/162 (83.33%), Query Frame = 1


Query: 3   SLIPSIFGGRRNNNSDPMSLSLSLDVWDPFGG---------------DTSAMANTRIDWK 62
           +L+PSIFGGRR+N  DP SL    D+WDPF G               +TSA ANTRIDWK
Sbjct: 2   ALVPSIFGGRRSNVFDPFSL----DIWDPFEGFPFSNSLANAPSSARETSAFANTRIDWK 61

Query: 63  ETPEAHIFKADLPGMKKEEVKVEVEEGRVLQISGERSKEKEEKNDKWHRVERSSGKFMRR 122
           ETP+AHIFKADLPG+KKEEVKVEVEEGRVLQISGERSKE+EEKNDKWHR+ERS GKFMRR
Sbjct: 62  ETPQAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEQEEKNDKWHRIERSCGKFMRR 121

Query: 123 FRLPENAKVDEVKASIENGVLTVRVPKTKEKKPEIRSIEISG 150
           FRLPENAKV+EVKAS+ENGVLTV VPK +EKKPEI+SI+I+G
Sbjct: 122 FRLPENAKVEEVKASMENGVLTVMVPKMEEKKPEIKSIDIAG 159

[Close]

BLAST of CmoCh04G012120.1 vs. TrEMBL
Match: H6TB42_CITLA (HSP18.1A OS=Citrullus lanatus PE=2 SV=1)

HSP 1 Score: 230.3 bits (586), Expect = 1.5e-57
Identity = 121/162 (74.69%), Postives = 134/162 (82.72%), Query Frame = 1


Query: 3   SLIPSIFGGRRNNNSDPMSLSLSLDVWDPFGG---------------DTSAMANTRIDWK 62
           +LIP+IFGGRR+N  DP SL    DVWDPF G               +TSA ANTRIDWK
Sbjct: 2   ALIPTIFGGRRSNVFDPFSL----DVWDPFEGFPFSNSLANLPSSARETSAFANTRIDWK 61

Query: 63  ETPEAHIFKADLPGMKKEEVKVEVEEGRVLQISGERSKEKEEKNDKWHRVERSSGKFMRR 122
           ETP+AHIFKADLPG+KKEEVKVEVEEGRVLQISGERSKE EEKNDKWHR+ERSSGKFMRR
Sbjct: 62  ETPQAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEHEEKNDKWHRIERSSGKFMRR 121

Query: 123 FRLPENAKVDEVKASIENGVLTVRVPKTKEKKPEIRSIEISG 150
           FRLPENAK +EVKAS+ENGVLTV VPK +EKKPE++SI+ISG
Sbjct: 122 FRLPENAKAEEVKASMENGVLTVTVPKIEEKKPEVKSIDISG 159

[Close]

BLAST of CmoCh04G012120.1 vs. TrEMBL
Match: W9RU25_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_025215 PE=3 SV=1)

HSP 1 Score: 229.9 bits (585), Expect = 2.0e-57
Identity = 117/157 (74.52%), Postives = 132/157 (84.08%), Query Frame = 1


Query: 3   SLIPSIFGGRRNNNSDPMSLSLSLDVWDPFGG----------DTSAMANTRIDWKETPEA 62
           SLIPSIFGGRR N  DP+SL    D+WDPF G          +TSA ANTRIDWKETPEA
Sbjct: 2   SLIPSIFGGRRTNVFDPVSL----DIWDPFDGSFNSALTTSPETSAFANTRIDWKETPEA 61

Query: 63  HIFKADLPGMKKEEVKVEVEEGRVLQISGERSKEKEEKNDKWHRVERSSGKFMRRFRLPE 122
           H+FKAD+PG+KKEEVKVEVEEGR+LQISGERSKE+EEKNDKWHRVERSSGKF+RRFRLPE
Sbjct: 62  HVFKADVPGLKKEEVKVEVEEGRILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPE 121

Query: 123 NAKVDEVKASIENGVLTVRVPKTKEKKPEIRSIEISG 150
           NAK D+VKAS+ENGVLT+ VPK   KKPE++ +EISG
Sbjct: 122 NAKTDQVKASLENGVLTITVPKEDGKKPEVKPVEISG 154

[Close]

BLAST of CmoCh04G012120.1 vs. TrEMBL
Match: W9S4S5_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_025214 PE=3 SV=1)

HSP 1 Score: 228.4 bits (581), Expect = 5.7e-57
Identity = 117/161 (72.67%), Postives = 132/161 (81.99%), Query Frame = 1


Query: 3   SLIPSIFGGRRNNNSDPMSLSLSLDVWDPFGG--------------DTSAMANTRIDWKE 62
           SLIPSIFGGRR N  DP+SL    D+WDPF G              +TSA ANTRIDWKE
Sbjct: 2   SLIPSIFGGRRTNVFDPVSL----DIWDPFDGFFNSALATVPPSAKETSAFANTRIDWKE 61

Query: 63  TPEAHIFKADLPGMKKEEVKVEVEEGRVLQISGERSKEKEEKNDKWHRVERSSGKFMRRF 122
           TPEAH+FKAD+PG+KKEEVKVEVEEGR+LQISGERSKE+EEKNDKWHRVERSSGKF+RRF
Sbjct: 62  TPEAHVFKADVPGLKKEEVKVEVEEGRILQISGERSKEQEEKNDKWHRVERSSGKFLRRF 121

Query: 123 RLPENAKVDEVKASIENGVLTVRVPKTKEKKPEIRSIEISG 150
           RLPENAK D+VKAS+ENGVLT+ VPK   KKPE++ +EISG
Sbjct: 122 RLPENAKTDQVKASLENGVLTITVPKEDGKKPEVKPVEISG 158

[Close]

BLAST of CmoCh04G012120.1 vs. TrEMBL
Match: B9T5S1_RICCO (Heat-shock protein, putative OS=Ricinus communis GN=RCOM_0450640 PE=3 SV=1)

HSP 1 Score: 228.4 bits (581), Expect = 5.7e-57
Identity = 118/159 (74.21%), Postives = 133/159 (83.65%), Query Frame = 1


Query: 3   SLIPSIFGGRRNNNSDPMSLSLSLDVWDPFGG------------DTSAMANTRIDWKETP 62
           SLIPSIFG RR N  DP SL    D+WDPF G            +TSA+AN RIDWKETP
Sbjct: 2   SLIPSIFGSRRTNVFDPFSL----DLWDPFDGLFNSANLPASARETSALANARIDWKETP 61

Query: 63  EAHIFKADLPGMKKEEVKVEVEEGRVLQISGERSKEKEEKNDKWHRVERSSGKFMRRFRL 122
           EAHIFKAD+PG+KKEEVKVEVEEGR+LQISGERSKE+EEKNDKWHRVERSSGKF RRFRL
Sbjct: 62  EAHIFKADVPGLKKEEVKVEVEEGRILQISGERSKEQEEKNDKWHRVERSSGKFFRRFRL 121

Query: 123 PENAKVDEVKASIENGVLTVRVPKTKEKKPEIRSIEISG 150
           PENAK++EVKAS+ENGVLTV VPK +EKKPE++S++ISG
Sbjct: 122 PENAKMEEVKASMENGVLTVTVPKEEEKKPEVKSVQISG 156

[Close]

BLAST of CmoCh04G012120.1 vs. TAIR10
Match: AT5G59720.1 (AT5G59720.1 heat shock protein 18.2)

HSP 1 Score: 215.3 bits (547), Expect = 2.5e-56
Identity = 112/162 (69.14%), Postives = 128/162 (79.01%), Query Frame = 1


Query: 3   SLIPSIFGGRRNNNSDPMSLSLSLDVWDPFGG---------------DTSAMANTRIDWK 62
           SLIPSIFGGRR+N  DP S     D+WDPF G               D +A  N R+DWK
Sbjct: 2   SLIPSIFGGRRSNVFDPFSQ----DLWDPFEGFFTPSSALANASTARDVAAFTNARVDWK 61

Query: 63  ETPEAHIFKADLPGMKKEEVKVEVEEGRVLQISGERSKEKEEKNDKWHRVERSSGKFMRR 122
           ETPEAH+FKADLPG+KKEEVKVEVE+  VLQISGERSKE EEKNDKWHRVER+SGKFMRR
Sbjct: 62  ETPEAHVFKADLPGLKKEEVKVEVEDKNVLQISGERSKENEEKNDKWHRVERASGKFMRR 121

Query: 123 FRLPENAKVDEVKASIENGVLTVRVPKTKEKKPEIRSIEISG 150
           FRLPENAK++EVKA++ENGVLTV VPK  EKKP+++SI+ISG
Sbjct: 122 FRLPENAKMEEVKATMENGVLTVVVPKAPEKKPQVKSIDISG 159

[Close]

BLAST of CmoCh04G012120.1 vs. TAIR10
Match: AT3G46230.1 (AT3G46230.1 heat shock protein 17.4)

HSP 1 Score: 213.0 bits (541), Expect = 1.3e-55
Identity = 107/159 (67.30%), Postives = 126/159 (79.25%), Query Frame = 1


Query: 3   SLIPSIFGGRRNNNSDPMSLSLSLDVWDPFGG------------DTSAMANTRIDWKETP 62
           SL+PS FGGRR N  DP SL    DVWDPF G            D +A  N ++DW+ETP
Sbjct: 2   SLVPSFFGGRRTNVFDPFSL----DVWDPFEGFLTPGLTNAPAKDVAAFTNAKVDWRETP 61

Query: 63  EAHIFKADLPGMKKEEVKVEVEEGRVLQISGERSKEKEEKNDKWHRVERSSGKFMRRFRL 122
           EAH+FKAD+PG+KKEEVKVEVE+G +LQISGERS E EEK+D WHRVERSSGKFMRRFRL
Sbjct: 62  EAHVFKADVPGLKKEEVKVEVEDGNILQISGERSSENEEKSDTWHRVERSSGKFMRRFRL 121

Query: 123 PENAKVDEVKASIENGVLTVRVPKTKEKKPEIRSIEISG 150
           PENAKV+EVKAS+ENGVL+V VPK +E KPE++S++ISG
Sbjct: 122 PENAKVEEVKASMENGVLSVTVPKVQESKPEVKSVDISG 156

[Close]

BLAST of CmoCh04G012120.1 vs. TAIR10
Match: AT1G53540.1 (AT1G53540.1 HSP20-like chaperones superfamily protein)

HSP 1 Score: 212.6 bits (540), Expect = 1.6e-55
Identity = 109/160 (68.12%), Postives = 127/160 (79.38%), Query Frame = 1


Query: 3   SLIPSIFGGRRNNNSDPMSLSLSLDVWDPFGG-------------DTSAMANTRIDWKET 62
           SLIPSIFGGRR N  DP SL    DV+DPF G             D +A  N ++DW+ET
Sbjct: 2   SLIPSIFGGRRTNVFDPFSL----DVFDPFEGFLTPSGLANAPAMDVAAFTNAKVDWRET 61

Query: 63  PEAHIFKADLPGMKKEEVKVEVEEGRVLQISGERSKEKEEKNDKWHRVERSSGKFMRRFR 122
           PEAH+FKADLPG++KEEVKVEVE+G +LQISGERS E EEKNDKWHRVERSSGKF RRFR
Sbjct: 62  PEAHVFKADLPGLRKEEVKVEVEDGNILQISGERSNENEEKNDKWHRVERSSGKFTRRFR 121

Query: 123 LPENAKVDEVKASIENGVLTVRVPKTKEKKPEIRSIEISG 150
           LPENAK++E+KAS+ENGVL+V VPK  EKKPE++SI+ISG
Sbjct: 122 LPENAKMEEIKASMENGVLSVTVPKVPEKKPEVKSIDISG 157

[Close]

BLAST of CmoCh04G012120.1 vs. TAIR10
Match: AT1G07400.1 (AT1G07400.1 HSP20-like chaperones superfamily protein)

HSP 1 Score: 193.7 bits (491), Expect = 7.9e-50
Identity = 104/160 (65.00%), Postives = 123/160 (76.88%), Query Frame = 1


Query: 3   SLIPSIFGGRRNNNS--DPMSLSLSLDVWDPF---------GGDTSAMANTRIDWKETPE 62
           SLIPS FG  R +NS  DP SL    DVWDPF          G+TSA+ N R+DWKET E
Sbjct: 2   SLIPSFFGNNRRSNSIFDPFSL----DVWDPFKELQFPSSLSGETSAITNARVDWKETAE 61

Query: 63  AHIFKADLPGMKKEEVKVEVEEGRVLQISGERSKEKEEKNDKWHRVERSSGKFMRRFRLP 122
           AH+FKADLPGMKKEEVKVE+E+  VL+ISGER  EKEEK D WHRVERSSG+F R+F+LP
Sbjct: 62  AHVFKADLPGMKKEEVKVEIEDDSVLKISGERHVEKEEKQDTWHRVERSSGQFSRKFKLP 121

Query: 123 ENAKVDEVKASIENGVLTVRVPKTKE--KKPEIRSIEISG 150
           EN K+D+VKAS+ENGVLTV VPK +E  KK +++SI+ISG
Sbjct: 122 ENVKMDQVKASMENGVLTVTVPKVEEAKKKAQVKSIDISG 157

[Close]

BLAST of CmoCh04G012120.1 vs. TAIR10
Match: AT2G29500.1 (AT2G29500.1 HSP20-like chaperones superfamily protein)

HSP 1 Score: 191.8 bits (486), Expect = 3.0e-49
Identity = 100/156 (64.10%), Postives = 121/156 (77.56%), Query Frame = 1


Query: 3   SLIPSIFGG-RRNNNSDPMSLSLSLDVWDPF--------GGDTSAMANTRIDWKETPEAH 62
           S+IPS F   RR+N  DP SL    DVWDPF          + SA+ N R+DW+ETPEAH
Sbjct: 2   SMIPSFFNNNRRSNIFDPFSL----DVWDPFKELTSSSLSRENSAIVNARVDWRETPEAH 61

Query: 63  IFKADLPGMKKEEVKVEVEEGRVLQISGERSKEKEEKNDKWHRVERSSGKFMRRFRLPEN 122
           +FKADLPG+KKEEVKVE+EE  VL+ISGER  EKE+KND WHRVERSSG+F RRFRLPEN
Sbjct: 62  VFKADLPGLKKEEVKVEIEEDSVLKISGERHVEKEDKNDTWHRVERSSGQFTRRFRLPEN 121

Query: 123 AKVDEVKASIENGVLTVRVPKTKEKKPEIRSIEISG 150
            K+D+VKA++ENGVLTV VPK + KK +++SI+ISG
Sbjct: 122 VKMDQVKAAMENGVLTVTVPKAETKKADVKSIQISG 153

[Close]

BLAST of CmoCh04G012120.1 vs. NCBI nr
Match: gi|659131157|ref|XP_008465538.1| (PREDICTED: 17.6 kDa class I heat shock protein 3-like [Cucumis melo])

HSP 1 Score: 232.3 bits (591), Expect = 5.7e-58
Identity = 123/162 (75.93%), Postives = 135/162 (83.33%), Query Frame = 1


Query: 3   SLIPSIFGGRRNNNSDPMSLSLSLDVWDPFGG---------------DTSAMANTRIDWK 62
           SLIPSIFGGRR+N  DP SL    D+WDPF G               +TSA ANTRIDWK
Sbjct: 2   SLIPSIFGGRRSNVFDPFSL----DIWDPFEGFPFSNSLANVPSSAVETSAFANTRIDWK 61

Query: 63  ETPEAHIFKADLPGMKKEEVKVEVEEGRVLQISGERSKEKEEKNDKWHRVERSSGKFMRR 122
           ETP+AHIFKADLPG+KKEEVKVEVEEGRVLQISGERSKE+EEKNDKWHRVERSSGKF RR
Sbjct: 62  ETPQAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEQEEKNDKWHRVERSSGKFTRR 121

Query: 123 FRLPENAKVDEVKASIENGVLTVRVPKTKEKKPEIRSIEISG 150
           FRLPENAKV+EVKA++ENGVLTV VPK +EKKPEI+SI+ISG
Sbjct: 122 FRLPENAKVEEVKANMENGVLTVTVPKVEEKKPEIKSIDISG 159

[Close]

BLAST of CmoCh04G012120.1 vs. NCBI nr
Match: gi|659126469|ref|XP_008463198.1| (PREDICTED: 18.1 kDa class I heat shock protein-like [Cucumis melo])

HSP 1 Score: 231.5 bits (589), Expect = 9.7e-58
Identity = 121/162 (74.69%), Postives = 136/162 (83.95%), Query Frame = 1


Query: 3   SLIPSIFGGRRNNNSDPMSLSLSLDVWDPFGG---------------DTSAMANTRIDWK 62
           +LIPSIFGGRR+N  DP SL    D+WDPF G               +TSA ANTRIDWK
Sbjct: 2   ALIPSIFGGRRSNVFDPFSL----DIWDPFEGFSFSNSLANLPSSARETSAFANTRIDWK 61

Query: 63  ETPEAHIFKADLPGMKKEEVKVEVEEGRVLQISGERSKEKEEKNDKWHRVERSSGKFMRR 122
           ETP+AHIFKADLPG+KKEEVKVEVEEGRVLQISGERSKE+EEKNDKWHR+ERSSGKFMRR
Sbjct: 62  ETPQAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEQEEKNDKWHRIERSSGKFMRR 121

Query: 123 FRLPENAKVDEVKASIENGVLTVRVPKTKEKKPEIRSIEISG 150
           FRLPENAKV+EVKA++ENGVLTV VPK +EKKPEI+SI+I+G
Sbjct: 122 FRLPENAKVEEVKANMENGVLTVTVPKMEEKKPEIKSIDIAG 159

[Close]

BLAST of CmoCh04G012120.1 vs. NCBI nr
Match: gi|778701197|ref|XP_004150235.2| (PREDICTED: 18.1 kDa class I heat shock protein-like [Cucumis sativus])

HSP 1 Score: 230.3 bits (586), Expect = 2.2e-57
Identity = 120/162 (74.07%), Postives = 135/162 (83.33%), Query Frame = 1


Query: 3   SLIPSIFGGRRNNNSDPMSLSLSLDVWDPFGG---------------DTSAMANTRIDWK 62
           +L+PSIFGGRR+N  DP SL    D+WDPF G               +TSA ANTRIDWK
Sbjct: 2   ALVPSIFGGRRSNVFDPFSL----DIWDPFEGFPFSNSLANAPSSARETSAFANTRIDWK 61

Query: 63  ETPEAHIFKADLPGMKKEEVKVEVEEGRVLQISGERSKEKEEKNDKWHRVERSSGKFMRR 122
           ETP+AHIFKADLPG+KKEEVKVEVEEGRVLQISGERSKE+EEKNDKWHR+ERS GKFMRR
Sbjct: 62  ETPQAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEQEEKNDKWHRIERSCGKFMRR 121

Query: 123 FRLPENAKVDEVKASIENGVLTVRVPKTKEKKPEIRSIEISG 150
           FRLPENAKV+EVKAS+ENGVLTV VPK +EKKPEI+SI+I+G
Sbjct: 122 FRLPENAKVEEVKASMENGVLTVMVPKMEEKKPEIKSIDIAG 159

[Close]

BLAST of CmoCh04G012120.1 vs. NCBI nr
Match: gi|315932718|gb|ADU55789.1| (HSP18.1A [Citrullus lanatus])

HSP 1 Score: 230.3 bits (586), Expect = 2.2e-57
Identity = 121/162 (74.69%), Postives = 134/162 (82.72%), Query Frame = 1


Query: 3   SLIPSIFGGRRNNNSDPMSLSLSLDVWDPFGG---------------DTSAMANTRIDWK 62
           +LIP+IFGGRR+N  DP SL    DVWDPF G               +TSA ANTRIDWK
Sbjct: 2   ALIPTIFGGRRSNVFDPFSL----DVWDPFEGFPFSNSLANLPSSARETSAFANTRIDWK 61

Query: 63  ETPEAHIFKADLPGMKKEEVKVEVEEGRVLQISGERSKEKEEKNDKWHRVERSSGKFMRR 122
           ETP+AHIFKADLPG+KKEEVKVEVEEGRVLQISGERSKE EEKNDKWHR+ERSSGKFMRR
Sbjct: 62  ETPQAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEHEEKNDKWHRIERSSGKFMRR 121

Query: 123 FRLPENAKVDEVKASIENGVLTVRVPKTKEKKPEIRSIEISG 150
           FRLPENAK +EVKAS+ENGVLTV VPK +EKKPE++SI+ISG
Sbjct: 122 FRLPENAKAEEVKASMENGVLTVTVPKIEEKKPEVKSIDISG 159

[Close]

BLAST of CmoCh04G012120.1 vs. NCBI nr
Match: gi|703137497|ref|XP_010106458.1| (hypothetical protein L484_025215 [Morus notabilis])

HSP 1 Score: 229.9 bits (585), Expect = 2.8e-57
Identity = 117/157 (74.52%), Postives = 132/157 (84.08%), Query Frame = 1


Query: 3   SLIPSIFGGRRNNNSDPMSLSLSLDVWDPFGG----------DTSAMANTRIDWKETPEA 62
           SLIPSIFGGRR N  DP+SL    D+WDPF G          +TSA ANTRIDWKETPEA
Sbjct: 2   SLIPSIFGGRRTNVFDPVSL----DIWDPFDGSFNSALTTSPETSAFANTRIDWKETPEA 61

Query: 63  HIFKADLPGMKKEEVKVEVEEGRVLQISGERSKEKEEKNDKWHRVERSSGKFMRRFRLPE 122
           H+FKAD+PG+KKEEVKVEVEEGR+LQISGERSKE+EEKNDKWHRVERSSGKF+RRFRLPE
Sbjct: 62  HVFKADVPGLKKEEVKVEVEEGRILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPE 121

Query: 123 NAKVDEVKASIENGVLTVRVPKTKEKKPEIRSIEISG 150
           NAK D+VKAS+ENGVLT+ VPK   KKPE++ +EISG
Sbjct: 122 NAKTDQVKASLENGVLTITVPKEDGKKPEVKPVEISG 154

The following BLAST results are available for this feature:

BLAST of CmoCh04G012120.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
HSP11_DAUCA	3.1e-56	70.00	17.8 kDa class I heat shock protein OS=Daucus carota PE=3 SV=1	[more]
HS181_ARATH	4.5e-55	69.14	18.1 kDa class I heat shock protein OS=Arabidopsis thaliana GN=HSP18.1 PE=1 SV=1	[more]
HSP12_DAUCA	1.7e-54	68.52	18.0 kDa class I heat shock protein OS=Daucus carota PE=3 SV=1	[more]
HSP12_MEDSA	2.2e-54	68.32	18.2 kDa class I heat shock protein OS=Medicago sativa GN=HSP18.2 PE=2 SV=1	[more]
HSP13_SOYBN	2.2e-54	69.23	17.5 kDa class I heat shock protein OS=Glycine max GN=HSP17.5-M PE=3 SV=1	[more]

BLAST of CmoCh04G012120.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KLU0_CUCSA	1.5e-57	74.07	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G197620 PE=3 SV=1	[more]
H6TB42_CITLA	1.5e-57	74.69	HSP18.1A OS=Citrullus lanatus PE=2 SV=1	[more]
W9RU25_9ROSA	2.0e-57	74.52	Uncharacterized protein OS=Morus notabilis GN=L484_025215 PE=3 SV=1	[more]
W9S4S5_9ROSA	5.7e-57	72.67	Uncharacterized protein OS=Morus notabilis GN=L484_025214 PE=3 SV=1	[more]
B9T5S1_RICCO	5.7e-57	74.21	Heat-shock protein, putative OS=Ricinus communis GN=RCOM_0450640 PE=3 SV=1	[more]

BLAST of CmoCh04G012120.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G59720.1	2.5e-56	69.14	heat shock protein 18.2	[more]
AT3G46230.1	1.3e-55	67.30	heat shock protein 17.4	[more]
AT1G53540.1	1.6e-55	68.13	HSP20-like chaperones superfamily protein	[more]
AT1G07400.1	7.9e-50	65.00	HSP20-like chaperones superfamily protein	[more]
AT2G29500.1	3.0e-49	64.10	HSP20-like chaperones superfamily protein	[more]

BLAST of CmoCh04G012120.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659131157\|ref\|XP_008465538.1\|	5.7e-58	75.93	PREDICTED: 17.6 kDa class I heat shock protein 3-like [Cucumis melo]	[more]
gi\|659126469\|ref\|XP_008463198.1\|	9.7e-58	74.69	PREDICTED: 18.1 kDa class I heat shock protein-like [Cucumis melo]	[more]
gi\|778701197\|ref\|XP_004150235.2\|	2.2e-57	74.07	PREDICTED: 18.1 kDa class I heat shock protein-like [Cucumis sativus]	[more]
gi\|315932718\|gb\|ADU55789.1\|	2.2e-57	74.69	HSP18.1A [Citrullus lanatus]	[more]
gi\|703137497\|ref\|XP_010106458.1\|	2.8e-57	74.52	hypothetical protein L484_025215 [Morus notabilis]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR002068	A-crystallin/Hsp20_dom
IPR008978	HSP20-like_chaperone

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmoCh04G012120	CmoCh04G012120	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmoCh04G012120.1	CmoCh04G012120.1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh04G012120.1.CDS.1	CmoCh04G012120.1.CDS.1	CDS

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh04G012120.1.exon.1	CmoCh04G012120.1.exon.1	exon

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002068	Alpha crystallin/Hsp20 domain	PFAM	PF00011	HSP20	coord: 45..148 score: 1.6
IPR002068	Alpha crystallin/Hsp20 domain	PROFILE	PS01031	HSP20	coord: 45..134 score: 26
IPR008978	HSP20-like chaperone	GENE3D	G3DSA:2.60.40.790		coord: 32..148 score: 4.7
IPR008978	HSP20-like chaperone	unknown	SSF49764	HSP20-like chaperones	coord: 26..149 score: 6.63
None	No IPR available	PANTHER	PTHR11527:SF158	17.6 KDA CLASS I HEAT SHOCK PROTEIN 1-RELATED	coord: 1..149 score: 4.2