CmoCh04G012120 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh04G012120
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	17.4 kDa class I heat shock family protein
Location	Cmo_Chr04 : 6168330 .. 6168779 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACGTCGCTGATTCCAAGCATTTTCGGTGGGCGTAGGAACAACAACTCGGACCCCATGTCATTGTCATTGTCATTGGATGTTTGGGATCCATTTGGTGGGGACACCTCTGCTATGGCCAACACTCGCATAGACTGGAAAGAGACCCCAGAAGCCCACATCTTCAAGGCCGATCTTCCGGGGATGAAGAAGGAGGAAGTAAAAGTAGAAGTGGAAGAAGGCAGAGTTCTGCAGATCAGTGGAGAAAGGAGCAAAGAAAAGGAGGAGAAGAATGATAAATGGCACAGAGTGGAACGAAGCAGTGGGAAGTTCATGAGGAGATTTAGGCTGCCGGAGAACGCTAAAGTTGATGAGGTGAAGGCTAGCATCGAGAATGGAGTTCTCACTGTGAGGGTGCCTAAGACGAAAGAGAAGAAGCCTGAAATCAGATCCATTGAAATCTCAGGCTAA

mRNA sequence

ATGACGTCGCTGATTCCAAGCATTTTCGGTGGGCGTAGGAACAACAACTCGGACCCCATGTCATTGTCATTGTCATTGGATGTTTGGGATCCATTTGGTGGGGACACCTCTGCTATGGCCAACACTCGCATAGACTGGAAAGAGACCCCAGAAGCCCACATCTTCAAGGCCGATCTTCCGGGGATGAAGAAGGAGGAAGTAAAAGTAGAAGTGGAAGAAGGCAGAGTTCTGCAGATCAGTGGAGAAAGGAGCAAAGAAAAGGAGGAGAAGAATGATAAATGGCACAGAGTGGAACGAAGCAGTGGGAAGTTCATGAGGAGATTTAGGCTGCCGGAGAACGCTAAAGTTGATGAGGTGAAGGCTAGCATCGAGAATGGAGTTCTCACTGTGAGGGTGCCTAAGACGAAAGAGAAGAAGCCTGAAATCAGATCCATTGAAATCTCAGGCTAA

Coding sequence (CDS)

ATGACGTCGCTGATTCCAAGCATTTTCGGTGGGCGTAGGAACAACAACTCGGACCCCATGTCATTGTCATTGTCATTGGATGTTTGGGATCCATTTGGTGGGGACACCTCTGCTATGGCCAACACTCGCATAGACTGGAAAGAGACCCCAGAAGCCCACATCTTCAAGGCCGATCTTCCGGGGATGAAGAAGGAGGAAGTAAAAGTAGAAGTGGAAGAAGGCAGAGTTCTGCAGATCAGTGGAGAAAGGAGCAAAGAAAAGGAGGAGAAGAATGATAAATGGCACAGAGTGGAACGAAGCAGTGGGAAGTTCATGAGGAGATTTAGGCTGCCGGAGAACGCTAAAGTTGATGAGGTGAAGGCTAGCATCGAGAATGGAGTTCTCACTGTGAGGGTGCCTAAGACGAAAGAGAAGAAGCCTGAAATCAGATCCATTGAAATCTCAGGCTAA

Homology

[Close]

BLAST of CmoCh04G012120 vs. Swiss-Prot
Match: HSP11_DAUCA (17.8 kDa class I heat shock protein OS=Daucus carota PE=3 SV=1)

HSP 1 Score: 219.2 bits (557), Expect = 3.1e-56
Identity = 112/160 (70.00%), Postives = 131/160 (81.88%), Query Frame = 1


Query: 3   SLIPSIFGGRRNNNSDPMSLSLSLDVWDPF-------------GGDTSAMANTRIDWKET 62
           S+IPS FGGRR+N  DP SL    DVWDPF             G +T+A  NT IDWKET
Sbjct: 2   SIIPSFFGGRRSNVFDPFSL----DVWDPFKDFPLVTSSASEFGKETAAFVNTHIDWKET 61

Query: 63  PEAHIFKADLPGMKKEEVKVEVEEGRVLQISGERSKEKEEKNDKWHRVERSSGKFMRRFR 122
           P+AH+FKADLPG+KKEEVKVE+EEG+VLQISGER+KEKEEKNDKWHRVERSSGKF+RRFR
Sbjct: 62  PQAHVFKADLPGLKKEEVKVELEEGKVLQISGERNKEKEEKNDKWHRVERSSGKFLRRFR 121

Query: 123 LPENAKVDEVKASIENGVLTVRVPKTKEKKPEIRSIEISG 150
           LPENAKVDEVKA++ NGV+TV VPK + KKPE+++I+ISG
Sbjct: 122 LPENAKVDEVKAAMANGVVTVTVPKVEIKKPEVKAIDISG 157

[Close]

BLAST of CmoCh04G012120 vs. Swiss-Prot
Match: HS181_ARATH (18.1 kDa class I heat shock protein OS=Arabidopsis thaliana GN=HSP18.1 PE=1 SV=1)

HSP 1 Score: 215.3 bits (547), Expect = 4.5e-55
Identity = 112/162 (69.14%), Postives = 128/162 (79.01%), Query Frame = 1


Query: 3   SLIPSIFGGRRNNNSDPMSLSLSLDVWDPFGG---------------DTSAMANTRIDWK 62
           SLIPSIFGGRR+N  DP S     D+WDPF G               D +A  N R+DWK
Sbjct: 2   SLIPSIFGGRRSNVFDPFSQ----DLWDPFEGFFTPSSALANASTARDVAAFTNARVDWK 61

Query: 63  ETPEAHIFKADLPGMKKEEVKVEVEEGRVLQISGERSKEKEEKNDKWHRVERSSGKFMRR 122
           ETPEAH+FKADLPG+KKEEVKVEVE+  VLQISGERSKE EEKNDKWHRVER+SGKFMRR
Sbjct: 62  ETPEAHVFKADLPGLKKEEVKVEVEDKNVLQISGERSKENEEKNDKWHRVERASGKFMRR 121

Query: 123 FRLPENAKVDEVKASIENGVLTVRVPKTKEKKPEIRSIEISG 150
           FRLPENAK++EVKA++ENGVLTV VPK  EKKP+++SI+ISG
Sbjct: 122 FRLPENAKMEEVKATMENGVLTVVVPKAPEKKPQVKSIDISG 159

[Close]

BLAST of CmoCh04G012120 vs. Swiss-Prot
Match: HSP12_DAUCA (18.0 kDa class I heat shock protein OS=Daucus carota PE=3 SV=1)

HSP 1 Score: 213.4 bits (542), Expect = 1.7e-54
Identity = 111/162 (68.52%), Postives = 128/162 (79.01%), Query Frame = 1


Query: 3   SLIPSIFGGRRNNNSDPMSLSLSLDVWDPF---------------GGDTSAMANTRIDWK 62
           S+IPS FG RR+N  +P SL    D+WDPF               G +T+A ANT IDWK
Sbjct: 2   SIIPSFFGSRRSNVLNPFSL----DIWDPFQDYPLITSSGTSSEFGKETAAFANTHIDWK 61

Query: 63  ETPEAHIFKADLPGMKKEEVKVEVEEGRVLQISGERSKEKEEKNDKWHRVERSSGKFMRR 122
           ETP+AH+FKADLPG+KKEEVKVEVEEG+VLQISGER+KEKEEKN+KWHRVE SSGKF+RR
Sbjct: 62  ETPQAHVFKADLPGLKKEEVKVEVEEGKVLQISGERNKEKEEKNNKWHRVEFSSGKFLRR 121

Query: 123 FRLPENAKVDEVKASIENGVLTVRVPKTKEKKPEIRSIEISG 150
           FRLPENA VDEVKA +ENGVLTV VPK + KKPE++SI ISG
Sbjct: 122 FRLPENANVDEVKAGMENGVLTVTVPKVEMKKPEVKSIHISG 159

[Close]

BLAST of CmoCh04G012120 vs. Swiss-Prot
Match: HSP12_MEDSA (18.2 kDa class I heat shock protein OS=Medicago sativa GN=HSP18.2 PE=2 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 2.2e-54
Identity = 110/161 (68.32%), Postives = 129/161 (80.12%), Query Frame = 1


Query: 3   SLIPSIFGGRRNNNSDPMSLSLSLDVWDPFGG--------------DTSAMANTRIDWKE 62
           SLIPS FGGRR+N  DP SL    DVWDPF                + SA  +TR+DWKE
Sbjct: 2   SLIPSFFGGRRSNVFDPFSL----DVWDPFKDFPFNNSALSASFPRENSAFVSTRVDWKE 61

Query: 63  TPEAHIFKADLPGMKKEEVKVEVEEGRVLQISGERSKEKEEKNDKWHRVERSSGKFMRRF 122
           TPEAH+FKADLPGMKKEEVKVE+E+ RVLQISGERS EKE+KND+WHR+ERSSGKFMRRF
Sbjct: 62  TPEAHVFKADLPGMKKEEVKVEIEDDRVLQISGERSVEKEDKNDQWHRLERSSGKFMRRF 121

Query: 123 RLPENAKVDEVKASIENGVLTVRVPKTKEKKPEIRSIEISG 150
           RLPENAK+D+VKA++ENGVLTV VPK + KKPE+++I+ISG
Sbjct: 122 RLPENAKMDQVKAAMENGVLTVTVPKEEVKKPEVKTIDISG 158

[Close]

BLAST of CmoCh04G012120 vs. Swiss-Prot
Match: HSP13_SOYBN (17.5 kDa class I heat shock protein OS=Glycine max GN=HSP17.5-M PE=3 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 2.2e-54
Identity = 108/156 (69.23%), Postives = 128/156 (82.05%), Query Frame = 1


Query: 3   SLIPSIFGGRRNNNSDPMSLSLSLDVWDPF---------GGDTSAMANTRIDWKETPEAH 62
           SLIPSIFGGRR+N  DP SL    DVWDPF           + SA  NTR+DWKETPEAH
Sbjct: 2   SLIPSIFGGRRSNVFDPFSL----DVWDPFKDFHFPTSLSAENSAFVNTRVDWKETPEAH 61

Query: 63  IFKADLPGMKKEEVKVEVEEGRVLQISGERSKEKEEKNDKWHRVERSSGKFMRRFRLPEN 122
           +F+AD+PG+KKEEVKV++E+ RVLQISGER+ EKE+KND WHRVERSSG FMRRFRLPEN
Sbjct: 62  VFEADIPGLKKEEVKVQIEDDRVLQISGERNLEKEDKNDTWHRVERSSGNFMRRFRLPEN 121

Query: 123 AKVDEVKASIENGVLTVRVPKTKEKKPEIRSIEISG 150
           AKV++VKAS+ENGVLTV VPK + KKP++++IEISG
Sbjct: 122 AKVEQVKASMENGVLTVTVPKEEVKKPDVKAIEISG 153

[Close]

BLAST of CmoCh04G012120 vs. TrEMBL
Match: A0A0A0KLU0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G197620 PE=3 SV=1)

HSP 1 Score: 230.3 bits (586), Expect = 1.5e-57
Identity = 120/162 (74.07%), Postives = 135/162 (83.33%), Query Frame = 1


Query: 3   SLIPSIFGGRRNNNSDPMSLSLSLDVWDPFGG---------------DTSAMANTRIDWK 62
           +L+PSIFGGRR+N  DP SL    D+WDPF G               +TSA ANTRIDWK
Sbjct: 2   ALVPSIFGGRRSNVFDPFSL----DIWDPFEGFPFSNSLANAPSSARETSAFANTRIDWK 61

Query: 63  ETPEAHIFKADLPGMKKEEVKVEVEEGRVLQISGERSKEKEEKNDKWHRVERSSGKFMRR 122
           ETP+AHIFKADLPG+KKEEVKVEVEEGRVLQISGERSKE+EEKNDKWHR+ERS GKFMRR
Sbjct: 62  ETPQAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEQEEKNDKWHRIERSCGKFMRR 121

Query: 123 FRLPENAKVDEVKASIENGVLTVRVPKTKEKKPEIRSIEISG 150
           FRLPENAKV+EVKAS+ENGVLTV VPK +EKKPEI+SI+I+G
Sbjct: 122 FRLPENAKVEEVKASMENGVLTVMVPKMEEKKPEIKSIDIAG 159

[Close]

BLAST of CmoCh04G012120 vs. TrEMBL
Match: H6TB42_CITLA (HSP18.1A OS=Citrullus lanatus PE=2 SV=1)

HSP 1 Score: 230.3 bits (586), Expect = 1.5e-57
Identity = 121/162 (74.69%), Postives = 134/162 (82.72%), Query Frame = 1


Query: 3   SLIPSIFGGRRNNNSDPMSLSLSLDVWDPFGG---------------DTSAMANTRIDWK 62
           +LIP+IFGGRR+N  DP SL    DVWDPF G               +TSA ANTRIDWK
Sbjct: 2   ALIPTIFGGRRSNVFDPFSL----DVWDPFEGFPFSNSLANLPSSARETSAFANTRIDWK 61

Query: 63  ETPEAHIFKADLPGMKKEEVKVEVEEGRVLQISGERSKEKEEKNDKWHRVERSSGKFMRR 122
           ETP+AHIFKADLPG+KKEEVKVEVEEGRVLQISGERSKE EEKNDKWHR+ERSSGKFMRR
Sbjct: 62  ETPQAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEHEEKNDKWHRIERSSGKFMRR 121

Query: 123 FRLPENAKVDEVKASIENGVLTVRVPKTKEKKPEIRSIEISG 150
           FRLPENAK +EVKAS+ENGVLTV VPK +EKKPE++SI+ISG
Sbjct: 122 FRLPENAKAEEVKASMENGVLTVTVPKIEEKKPEVKSIDISG 159

[Close]

BLAST of CmoCh04G012120 vs. TrEMBL
Match: W9RU25_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_025215 PE=3 SV=1)

HSP 1 Score: 229.9 bits (585), Expect = 2.0e-57
Identity = 117/157 (74.52%), Postives = 132/157 (84.08%), Query Frame = 1


Query: 3   SLIPSIFGGRRNNNSDPMSLSLSLDVWDPFGG----------DTSAMANTRIDWKETPEA 62
           SLIPSIFGGRR N  DP+SL    D+WDPF G          +TSA ANTRIDWKETPEA
Sbjct: 2   SLIPSIFGGRRTNVFDPVSL----DIWDPFDGSFNSALTTSPETSAFANTRIDWKETPEA 61

Query: 63  HIFKADLPGMKKEEVKVEVEEGRVLQISGERSKEKEEKNDKWHRVERSSGKFMRRFRLPE 122
           H+FKAD+PG+KKEEVKVEVEEGR+LQISGERSKE+EEKNDKWHRVERSSGKF+RRFRLPE
Sbjct: 62  HVFKADVPGLKKEEVKVEVEEGRILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPE 121

Query: 123 NAKVDEVKASIENGVLTVRVPKTKEKKPEIRSIEISG 150
           NAK D+VKAS+ENGVLT+ VPK   KKPE++ +EISG
Sbjct: 122 NAKTDQVKASLENGVLTITVPKEDGKKPEVKPVEISG 154

[Close]

BLAST of CmoCh04G012120 vs. TrEMBL
Match: W9S4S5_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_025214 PE=3 SV=1)

HSP 1 Score: 228.4 bits (581), Expect = 5.7e-57
Identity = 117/161 (72.67%), Postives = 132/161 (81.99%), Query Frame = 1


Query: 3   SLIPSIFGGRRNNNSDPMSLSLSLDVWDPFGG--------------DTSAMANTRIDWKE 62
           SLIPSIFGGRR N  DP+SL    D+WDPF G              +TSA ANTRIDWKE
Sbjct: 2   SLIPSIFGGRRTNVFDPVSL----DIWDPFDGFFNSALATVPPSAKETSAFANTRIDWKE 61

Query: 63  TPEAHIFKADLPGMKKEEVKVEVEEGRVLQISGERSKEKEEKNDKWHRVERSSGKFMRRF 122
           TPEAH+FKAD+PG+KKEEVKVEVEEGR+LQISGERSKE+EEKNDKWHRVERSSGKF+RRF
Sbjct: 62  TPEAHVFKADVPGLKKEEVKVEVEEGRILQISGERSKEQEEKNDKWHRVERSSGKFLRRF 121

Query: 123 RLPENAKVDEVKASIENGVLTVRVPKTKEKKPEIRSIEISG 150
           RLPENAK D+VKAS+ENGVLT+ VPK   KKPE++ +EISG
Sbjct: 122 RLPENAKTDQVKASLENGVLTITVPKEDGKKPEVKPVEISG 158

[Close]

BLAST of CmoCh04G012120 vs. TrEMBL
Match: B9T5S1_RICCO (Heat-shock protein, putative OS=Ricinus communis GN=RCOM_0450640 PE=3 SV=1)

HSP 1 Score: 228.4 bits (581), Expect = 5.7e-57
Identity = 118/159 (74.21%), Postives = 133/159 (83.65%), Query Frame = 1


Query: 3   SLIPSIFGGRRNNNSDPMSLSLSLDVWDPFGG------------DTSAMANTRIDWKETP 62
           SLIPSIFG RR N  DP SL    D+WDPF G            +TSA+AN RIDWKETP
Sbjct: 2   SLIPSIFGSRRTNVFDPFSL----DLWDPFDGLFNSANLPASARETSALANARIDWKETP 61

Query: 63  EAHIFKADLPGMKKEEVKVEVEEGRVLQISGERSKEKEEKNDKWHRVERSSGKFMRRFRL 122
           EAHIFKAD+PG+KKEEVKVEVEEGR+LQISGERSKE+EEKNDKWHRVERSSGKF RRFRL
Sbjct: 62  EAHIFKADVPGLKKEEVKVEVEEGRILQISGERSKEQEEKNDKWHRVERSSGKFFRRFRL 121

Query: 123 PENAKVDEVKASIENGVLTVRVPKTKEKKPEIRSIEISG 150
           PENAK++EVKAS+ENGVLTV VPK +EKKPE++S++ISG
Sbjct: 122 PENAKMEEVKASMENGVLTVTVPKEEEKKPEVKSVQISG 156

[Close]

BLAST of CmoCh04G012120 vs. TAIR10
Match: AT5G59720.1 (AT5G59720.1 heat shock protein 18.2)

HSP 1 Score: 215.3 bits (547), Expect = 2.5e-56
Identity = 112/162 (69.14%), Postives = 128/162 (79.01%), Query Frame = 1


Query: 3   SLIPSIFGGRRNNNSDPMSLSLSLDVWDPFGG---------------DTSAMANTRIDWK 62
           SLIPSIFGGRR+N  DP S     D+WDPF G               D +A  N R+DWK
Sbjct: 2   SLIPSIFGGRRSNVFDPFSQ----DLWDPFEGFFTPSSALANASTARDVAAFTNARVDWK 61

Query: 63  ETPEAHIFKADLPGMKKEEVKVEVEEGRVLQISGERSKEKEEKNDKWHRVERSSGKFMRR 122
           ETPEAH+FKADLPG+KKEEVKVEVE+  VLQISGERSKE EEKNDKWHRVER+SGKFMRR
Sbjct: 62  ETPEAHVFKADLPGLKKEEVKVEVEDKNVLQISGERSKENEEKNDKWHRVERASGKFMRR 121

Query: 123 FRLPENAKVDEVKASIENGVLTVRVPKTKEKKPEIRSIEISG 150
           FRLPENAK++EVKA++ENGVLTV VPK  EKKP+++SI+ISG
Sbjct: 122 FRLPENAKMEEVKATMENGVLTVVVPKAPEKKPQVKSIDISG 159

[Close]

BLAST of CmoCh04G012120 vs. TAIR10
Match: AT3G46230.1 (AT3G46230.1 heat shock protein 17.4)

HSP 1 Score: 213.0 bits (541), Expect = 1.3e-55
Identity = 107/159 (67.30%), Postives = 126/159 (79.25%), Query Frame = 1


Query: 3   SLIPSIFGGRRNNNSDPMSLSLSLDVWDPFGG------------DTSAMANTRIDWKETP 62
           SL+PS FGGRR N  DP SL    DVWDPF G            D +A  N ++DW+ETP
Sbjct: 2   SLVPSFFGGRRTNVFDPFSL----DVWDPFEGFLTPGLTNAPAKDVAAFTNAKVDWRETP 61

Query: 63  EAHIFKADLPGMKKEEVKVEVEEGRVLQISGERSKEKEEKNDKWHRVERSSGKFMRRFRL 122
           EAH+FKAD+PG+KKEEVKVEVE+G +LQISGERS E EEK+D WHRVERSSGKFMRRFRL
Sbjct: 62  EAHVFKADVPGLKKEEVKVEVEDGNILQISGERSSENEEKSDTWHRVERSSGKFMRRFRL 121

Query: 123 PENAKVDEVKASIENGVLTVRVPKTKEKKPEIRSIEISG 150
           PENAKV+EVKAS+ENGVL+V VPK +E KPE++S++ISG
Sbjct: 122 PENAKVEEVKASMENGVLSVTVPKVQESKPEVKSVDISG 156

[Close]

BLAST of CmoCh04G012120 vs. TAIR10
Match: AT1G53540.1 (AT1G53540.1 HSP20-like chaperones superfamily protein)

HSP 1 Score: 212.6 bits (540), Expect = 1.6e-55
Identity = 109/160 (68.12%), Postives = 127/160 (79.38%), Query Frame = 1


Query: 3   SLIPSIFGGRRNNNSDPMSLSLSLDVWDPFGG-------------DTSAMANTRIDWKET 62
           SLIPSIFGGRR N  DP SL    DV+DPF G             D +A  N ++DW+ET
Sbjct: 2   SLIPSIFGGRRTNVFDPFSL----DVFDPFEGFLTPSGLANAPAMDVAAFTNAKVDWRET 61

Query: 63  PEAHIFKADLPGMKKEEVKVEVEEGRVLQISGERSKEKEEKNDKWHRVERSSGKFMRRFR 122
           PEAH+FKADLPG++KEEVKVEVE+G +LQISGERS E EEKNDKWHRVERSSGKF RRFR
Sbjct: 62  PEAHVFKADLPGLRKEEVKVEVEDGNILQISGERSNENEEKNDKWHRVERSSGKFTRRFR 121

Query: 123 LPENAKVDEVKASIENGVLTVRVPKTKEKKPEIRSIEISG 150
           LPENAK++E+KAS+ENGVL+V VPK  EKKPE++SI+ISG
Sbjct: 122 LPENAKMEEIKASMENGVLSVTVPKVPEKKPEVKSIDISG 157

[Close]

BLAST of CmoCh04G012120 vs. TAIR10
Match: AT1G07400.1 (AT1G07400.1 HSP20-like chaperones superfamily protein)

HSP 1 Score: 193.7 bits (491), Expect = 7.9e-50
Identity = 104/160 (65.00%), Postives = 123/160 (76.88%), Query Frame = 1


Query: 3   SLIPSIFGGRRNNNS--DPMSLSLSLDVWDPF---------GGDTSAMANTRIDWKETPE 62
           SLIPS FG  R +NS  DP SL    DVWDPF          G+TSA+ N R+DWKET E
Sbjct: 2   SLIPSFFGNNRRSNSIFDPFSL----DVWDPFKELQFPSSLSGETSAITNARVDWKETAE 61

Query: 63  AHIFKADLPGMKKEEVKVEVEEGRVLQISGERSKEKEEKNDKWHRVERSSGKFMRRFRLP 122
           AH+FKADLPGMKKEEVKVE+E+  VL+ISGER  EKEEK D WHRVERSSG+F R+F+LP
Sbjct: 62  AHVFKADLPGMKKEEVKVEIEDDSVLKISGERHVEKEEKQDTWHRVERSSGQFSRKFKLP 121

Query: 123 ENAKVDEVKASIENGVLTVRVPKTKE--KKPEIRSIEISG 150
           EN K+D+VKAS+ENGVLTV VPK +E  KK +++SI+ISG
Sbjct: 122 ENVKMDQVKASMENGVLTVTVPKVEEAKKKAQVKSIDISG 157

[Close]

BLAST of CmoCh04G012120 vs. TAIR10
Match: AT2G29500.1 (AT2G29500.1 HSP20-like chaperones superfamily protein)

HSP 1 Score: 191.8 bits (486), Expect = 3.0e-49
Identity = 100/156 (64.10%), Postives = 121/156 (77.56%), Query Frame = 1


Query: 3   SLIPSIFGG-RRNNNSDPMSLSLSLDVWDPF--------GGDTSAMANTRIDWKETPEAH 62
           S+IPS F   RR+N  DP SL    DVWDPF          + SA+ N R+DW+ETPEAH
Sbjct: 2   SMIPSFFNNNRRSNIFDPFSL----DVWDPFKELTSSSLSRENSAIVNARVDWRETPEAH 61

Query: 63  IFKADLPGMKKEEVKVEVEEGRVLQISGERSKEKEEKNDKWHRVERSSGKFMRRFRLPEN 122
           +FKADLPG+KKEEVKVE+EE  VL+ISGER  EKE+KND WHRVERSSG+F RRFRLPEN
Sbjct: 62  VFKADLPGLKKEEVKVEIEEDSVLKISGERHVEKEDKNDTWHRVERSSGQFTRRFRLPEN 121

Query: 123 AKVDEVKASIENGVLTVRVPKTKEKKPEIRSIEISG 150
            K+D+VKA++ENGVLTV VPK + KK +++SI+ISG
Sbjct: 122 VKMDQVKAAMENGVLTVTVPKAETKKADVKSIQISG 153

[Close]

BLAST of CmoCh04G012120 vs. NCBI nr
Match: gi|659131157|ref|XP_008465538.1| (PREDICTED: 17.6 kDa class I heat shock protein 3-like [Cucumis melo])

HSP 1 Score: 232.3 bits (591), Expect = 5.7e-58
Identity = 123/162 (75.93%), Postives = 135/162 (83.33%), Query Frame = 1


Query: 3   SLIPSIFGGRRNNNSDPMSLSLSLDVWDPFGG---------------DTSAMANTRIDWK 62
           SLIPSIFGGRR+N  DP SL    D+WDPF G               +TSA ANTRIDWK
Sbjct: 2   SLIPSIFGGRRSNVFDPFSL----DIWDPFEGFPFSNSLANVPSSAVETSAFANTRIDWK 61

Query: 63  ETPEAHIFKADLPGMKKEEVKVEVEEGRVLQISGERSKEKEEKNDKWHRVERSSGKFMRR 122
           ETP+AHIFKADLPG+KKEEVKVEVEEGRVLQISGERSKE+EEKNDKWHRVERSSGKF RR
Sbjct: 62  ETPQAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEQEEKNDKWHRVERSSGKFTRR 121

Query: 123 FRLPENAKVDEVKASIENGVLTVRVPKTKEKKPEIRSIEISG 150
           FRLPENAKV+EVKA++ENGVLTV VPK +EKKPEI+SI+ISG
Sbjct: 122 FRLPENAKVEEVKANMENGVLTVTVPKVEEKKPEIKSIDISG 159

[Close]

BLAST of CmoCh04G012120 vs. NCBI nr
Match: gi|659126469|ref|XP_008463198.1| (PREDICTED: 18.1 kDa class I heat shock protein-like [Cucumis melo])

HSP 1 Score: 231.5 bits (589), Expect = 9.7e-58
Identity = 121/162 (74.69%), Postives = 136/162 (83.95%), Query Frame = 1


Query: 3   SLIPSIFGGRRNNNSDPMSLSLSLDVWDPFGG---------------DTSAMANTRIDWK 62
           +LIPSIFGGRR+N  DP SL    D+WDPF G               +TSA ANTRIDWK
Sbjct: 2   ALIPSIFGGRRSNVFDPFSL----DIWDPFEGFSFSNSLANLPSSARETSAFANTRIDWK 61

Query: 63  ETPEAHIFKADLPGMKKEEVKVEVEEGRVLQISGERSKEKEEKNDKWHRVERSSGKFMRR 122
           ETP+AHIFKADLPG+KKEEVKVEVEEGRVLQISGERSKE+EEKNDKWHR+ERSSGKFMRR
Sbjct: 62  ETPQAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEQEEKNDKWHRIERSSGKFMRR 121

Query: 123 FRLPENAKVDEVKASIENGVLTVRVPKTKEKKPEIRSIEISG 150
           FRLPENAKV+EVKA++ENGVLTV VPK +EKKPEI+SI+I+G
Sbjct: 122 FRLPENAKVEEVKANMENGVLTVTVPKMEEKKPEIKSIDIAG 159

[Close]

BLAST of CmoCh04G012120 vs. NCBI nr
Match: gi|778701197|ref|XP_004150235.2| (PREDICTED: 18.1 kDa class I heat shock protein-like [Cucumis sativus])

HSP 1 Score: 230.3 bits (586), Expect = 2.2e-57
Identity = 120/162 (74.07%), Postives = 135/162 (83.33%), Query Frame = 1


Query: 3   SLIPSIFGGRRNNNSDPMSLSLSLDVWDPFGG---------------DTSAMANTRIDWK 62
           +L+PSIFGGRR+N  DP SL    D+WDPF G               +TSA ANTRIDWK
Sbjct: 2   ALVPSIFGGRRSNVFDPFSL----DIWDPFEGFPFSNSLANAPSSARETSAFANTRIDWK 61

Query: 63  ETPEAHIFKADLPGMKKEEVKVEVEEGRVLQISGERSKEKEEKNDKWHRVERSSGKFMRR 122
           ETP+AHIFKADLPG+KKEEVKVEVEEGRVLQISGERSKE+EEKNDKWHR+ERS GKFMRR
Sbjct: 62  ETPQAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEQEEKNDKWHRIERSCGKFMRR 121

Query: 123 FRLPENAKVDEVKASIENGVLTVRVPKTKEKKPEIRSIEISG 150
           FRLPENAKV+EVKAS+ENGVLTV VPK +EKKPEI+SI+I+G
Sbjct: 122 FRLPENAKVEEVKASMENGVLTVMVPKMEEKKPEIKSIDIAG 159

[Close]

BLAST of CmoCh04G012120 vs. NCBI nr
Match: gi|315932718|gb|ADU55789.1| (HSP18.1A [Citrullus lanatus])

HSP 1 Score: 230.3 bits (586), Expect = 2.2e-57
Identity = 121/162 (74.69%), Postives = 134/162 (82.72%), Query Frame = 1


Query: 3   SLIPSIFGGRRNNNSDPMSLSLSLDVWDPFGG---------------DTSAMANTRIDWK 62
           +LIP+IFGGRR+N  DP SL    DVWDPF G               +TSA ANTRIDWK
Sbjct: 2   ALIPTIFGGRRSNVFDPFSL----DVWDPFEGFPFSNSLANLPSSARETSAFANTRIDWK 61

Query: 63  ETPEAHIFKADLPGMKKEEVKVEVEEGRVLQISGERSKEKEEKNDKWHRVERSSGKFMRR 122
           ETP+AHIFKADLPG+KKEEVKVEVEEGRVLQISGERSKE EEKNDKWHR+ERSSGKFMRR
Sbjct: 62  ETPQAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEHEEKNDKWHRIERSSGKFMRR 121

Query: 123 FRLPENAKVDEVKASIENGVLTVRVPKTKEKKPEIRSIEISG 150
           FRLPENAK +EVKAS+ENGVLTV VPK +EKKPE++SI+ISG
Sbjct: 122 FRLPENAKAEEVKASMENGVLTVTVPKIEEKKPEVKSIDISG 159

[Close]

BLAST of CmoCh04G012120 vs. NCBI nr
Match: gi|703137497|ref|XP_010106458.1| (hypothetical protein L484_025215 [Morus notabilis])

HSP 1 Score: 229.9 bits (585), Expect = 2.8e-57
Identity = 117/157 (74.52%), Postives = 132/157 (84.08%), Query Frame = 1


Query: 3   SLIPSIFGGRRNNNSDPMSLSLSLDVWDPFGG----------DTSAMANTRIDWKETPEA 62
           SLIPSIFGGRR N  DP+SL    D+WDPF G          +TSA ANTRIDWKETPEA
Sbjct: 2   SLIPSIFGGRRTNVFDPVSL----DIWDPFDGSFNSALTTSPETSAFANTRIDWKETPEA 61

Query: 63  HIFKADLPGMKKEEVKVEVEEGRVLQISGERSKEKEEKNDKWHRVERSSGKFMRRFRLPE 122
           H+FKAD+PG+KKEEVKVEVEEGR+LQISGERSKE+EEKNDKWHRVERSSGKF+RRFRLPE
Sbjct: 62  HVFKADVPGLKKEEVKVEVEEGRILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPE 121

Query: 123 NAKVDEVKASIENGVLTVRVPKTKEKKPEIRSIEISG 150
           NAK D+VKAS+ENGVLT+ VPK   KKPE++ +EISG
Sbjct: 122 NAKTDQVKASLENGVLTITVPKEDGKKPEVKPVEISG 154

The following BLAST results are available for this feature:

BLAST of CmoCh04G012120 vs. Swiss-Prot


Match Name	E-value	Identity	Description
HSP11_DAUCA	3.1e-56	70.00	17.8 kDa class I heat shock protein OS=Daucus carota PE=3 SV=1	[more]
HS181_ARATH	4.5e-55	69.14	18.1 kDa class I heat shock protein OS=Arabidopsis thaliana GN=HSP18.1 PE=1 SV=1	[more]
HSP12_DAUCA	1.7e-54	68.52	18.0 kDa class I heat shock protein OS=Daucus carota PE=3 SV=1	[more]
HSP12_MEDSA	2.2e-54	68.32	18.2 kDa class I heat shock protein OS=Medicago sativa GN=HSP18.2 PE=2 SV=1	[more]
HSP13_SOYBN	2.2e-54	69.23	17.5 kDa class I heat shock protein OS=Glycine max GN=HSP17.5-M PE=3 SV=1	[more]

BLAST of CmoCh04G012120 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KLU0_CUCSA	1.5e-57	74.07	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G197620 PE=3 SV=1	[more]
H6TB42_CITLA	1.5e-57	74.69	HSP18.1A OS=Citrullus lanatus PE=2 SV=1	[more]
W9RU25_9ROSA	2.0e-57	74.52	Uncharacterized protein OS=Morus notabilis GN=L484_025215 PE=3 SV=1	[more]
W9S4S5_9ROSA	5.7e-57	72.67	Uncharacterized protein OS=Morus notabilis GN=L484_025214 PE=3 SV=1	[more]
B9T5S1_RICCO	5.7e-57	74.21	Heat-shock protein, putative OS=Ricinus communis GN=RCOM_0450640 PE=3 SV=1	[more]

BLAST of CmoCh04G012120 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G59720.1	2.5e-56	69.14	heat shock protein 18.2	[more]
AT3G46230.1	1.3e-55	67.30	heat shock protein 17.4	[more]
AT1G53540.1	1.6e-55	68.13	HSP20-like chaperones superfamily protein	[more]
AT1G07400.1	7.9e-50	65.00	HSP20-like chaperones superfamily protein	[more]
AT2G29500.1	3.0e-49	64.10	HSP20-like chaperones superfamily protein	[more]

BLAST of CmoCh04G012120 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659131157\|ref\|XP_008465538.1\|	5.7e-58	75.93	PREDICTED: 17.6 kDa class I heat shock protein 3-like [Cucumis melo]	[more]
gi\|659126469\|ref\|XP_008463198.1\|	9.7e-58	74.69	PREDICTED: 18.1 kDa class I heat shock protein-like [Cucumis melo]	[more]
gi\|778701197\|ref\|XP_004150235.2\|	2.2e-57	74.07	PREDICTED: 18.1 kDa class I heat shock protein-like [Cucumis sativus]	[more]
gi\|315932718\|gb\|ADU55789.1\|	2.2e-57	74.69	HSP18.1A [Citrullus lanatus]	[more]
gi\|703137497\|ref\|XP_010106458.1\|	2.8e-57	74.52	hypothetical protein L484_025215 [Morus notabilis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR002068	A-crystallin/Hsp20_dom
IPR008978	HSP20-like_chaperone

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh04G012120.1	CmoCh04G012120.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002068	Alpha crystallin/Hsp20 domain	PFAM	PF00011	HSP20	coord: 45..148 score: 1.6
IPR002068	Alpha crystallin/Hsp20 domain	PROFILE	PS01031	HSP20	coord: 45..134 score: 26
IPR008978	HSP20-like chaperone	GENE3D	G3DSA:2.60.40.790		coord: 32..148 score: 4.7
IPR008978	HSP20-like chaperone	unknown	SSF49764	HSP20-like chaperones	coord: 26..149 score: 6.63
None	No IPR available	PANTHER	PTHR11527:SF158	17.6 KDA CLASS I HEAT SHOCK PROTEIN 1-RELATED	coord: 1..149 score: 4.2

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh04G012120	Cla004313	Watermelon (97103) v1	cmowmB684
CmoCh04G012120	Csa5G198120	Cucumber (Chinese Long) v2	cmocuB736
CmoCh04G012120	CSPI05G10310	Wild cucumber (PI 183967)	cmocpiB746
CmoCh04G012120	MELO3C003195.2	Melon (DHL92) v3.6.1	cmomedB799
CmoCh04G012120	Cla97C07G132300	Watermelon (97103) v2	cmowmbB754

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh04G012120	Silver-seed gourd	carcmoB0124
CmoCh04G012120	Silver-seed gourd	carcmoB0371
CmoCh04G012120	Silver-seed gourd	carcmoB0923
CmoCh04G012120	Cucumber (Chinese Long) v3	cmocucB0872
CmoCh04G012120	Cucumber (Chinese Long) v3	cmocucB0903
CmoCh04G012120	Watermelon (97103) v2	cmowmbB700
CmoCh04G012120	Watermelon (97103) v2	cmowmbB725
CmoCh04G012120	Wax gourd	cmowgoB0860
CmoCh04G012120	Wax gourd	cmowgoB0888
CmoCh04G012120	Cucurbita moschata (Rifu)	cmocmoB266
CmoCh04G012120	Cucurbita moschata (Rifu)	cmocmoB450
CmoCh04G012120	Cucurbita moschata (Rifu)	cmocmoB464
CmoCh04G012120	Cucurbita moschata (Rifu)	cmocmoB466
CmoCh04G012120	Cucumber (Gy14) v1	cgycmoB0372
CmoCh04G012120	Cucumber (Gy14) v1	cgycmoB0475
CmoCh04G012120	Cucurbita maxima (Rimu)	cmacmoB313
CmoCh04G012120	Cucurbita maxima (Rimu)	cmacmoB728
CmoCh04G012120	Cucurbita maxima (Rimu)	cmacmoB730
CmoCh04G012120	Cucurbita maxima (Rimu)	cmacmoB735
CmoCh04G012120	Wild cucumber (PI 183967)	cmocpiB773
CmoCh04G012120	Cucumber (Chinese Long) v2	cmocuB764
CmoCh04G012120	Melon (DHL92) v3.5.1	cmomeB675
CmoCh04G012120	Melon (DHL92) v3.5.1	cmomeB678
CmoCh04G012120	Watermelon (Charleston Gray)	cmowcgB625
CmoCh04G012120	Watermelon (Charleston Gray)	cmowcgB675
CmoCh04G012120	Watermelon (97103) v1	cmowmB668
CmoCh04G012120	Watermelon (97103) v1	cmowmB672
CmoCh04G012120	Watermelon (97103) v1	cmowmB734
CmoCh04G012120	Cucurbita pepo (Zucchini)	cmocpeB660
CmoCh04G012120	Cucurbita pepo (Zucchini)	cmocpeB673
CmoCh04G012120	Cucurbita pepo (Zucchini)	cmocpeB675
CmoCh04G012120	Cucurbita pepo (Zucchini)	cmocpeB711
CmoCh04G012120	Bottle gourd (USVL1VR-Ls)	cmolsiB631
CmoCh04G012120	Bottle gourd (USVL1VR-Ls)	cmolsiB648
CmoCh04G012120	Bottle gourd (USVL1VR-Ls)	cmolsiB669
CmoCh04G012120	Cucumber (Gy14) v2	cgybcmoB387
CmoCh04G012120	Cucumber (Gy14) v2	cgybcmoB530
CmoCh04G012120	Cucumber (Gy14) v2	cgybcmoB651
CmoCh04G012120	Cucumber (Gy14) v2	cgybcmoB820
CmoCh04G012120	Melon (DHL92) v3.6.1	cmomedB736
CmoCh04G012120	Melon (DHL92) v3.6.1	cmomedB764