CmoCh04G008590.1 (mRNA) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh04G008590.1
Type	mRNA
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Senescence-associated family protein
Location	Cmo_Chr04 : 4288131 .. 4288751 (-)
Sequence length	546

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTACTAGGGAACCCACGGCCGCAGATTAAGAGAACGGCGAGTGTATCGAGAATCACGGTGGATGTCAGGCAGGAAAAGGGTCAACAGCCGTACGATGATCAAAATCCGGACACCAAAGAAATTTCTCGTCTTGAGCAGGATGTAGTGAATTACACCTTTGCCTTCGCGTCACCGAGAGGCCGGAGAAGTCTCTCCCACAATTCTTCTCTTCATTTTCTACGTACTTGCTCCTTCTGTCAACGCCGTCTCTCACCCGCCCGTGACATTTACATGTACATGTATGTATGAGTCAATTATATCCATTTTTCTTATGTAAACCTCCATAAACTTGATTTTTAGTTGTTGATATGCAGGGGAGATACTGCTTTTTGCAGCATGGAGTGCAGAGAGCAGAGTATGGAACAAGAGAAGTGCACTACTGCCGGCGGCGGTGGCGGCCGAGCTAAAGAGAGATGAGACTGTGGCGGCGCTTTAAAAGTATTGTATTTGTTGGAATGTAAAAAAGAAAATGTGGAAGTTTGTGCCATCACAAAAACAAGGAACTTACTATGAATGATTATGAATCTTGCGGCTCAAACTTGTGAATTTCATATACATAAACTTAAAAGCTGACTAACG

mRNA sequence

ATGTTACTAGGGAACCCACGGCCGCAGATTAAGAGAACGGCGAGTGTATCGAGAATCACGGTGGATGTCAGGCAGGAAAAGGGTCAACAGCCGTACGATGATCAAAATCCGGACACCAAAGAAATTTCTCGTCTTGAGCAGGATGTAGTGAATTACACCTTTGCCTTCGCGTCACCGAGAGGCCGGAGAAGTCTCTCCCACAATTCTTCTCTTCATTTTCTACGTACTTGCTCCTTCTGTCAACGCCGTCTCTCACCCGCCCGTGACATTTACATGTACATGGGAGATACTGCTTTTTGCAGCATGGAGTGCAGAGAGCAGAGTATGGAACAAGAGAAGTGCACTACTGCCGGCGGCGGTGGCGGCCGAGCTAAAGAGAGATGAGACTGTGGCGGCGCTTTAAAAGTATTGTATTTGTTGGAATGTAAAAAAGAAAATGTGGAAGTTTGTGCCATCACAAAAACAAGGAACTTACTATGAATGATTATGAATCTTGCGGCTCAAACTTGTGAATTTCATATACATAAACTTAAAAGCTGACTAACG

Coding sequence (CDS)

ATGTTACTAGGGAACCCACGGCCGCAGATTAAGAGAACGGCGAGTGTATCGAGAATCACGGTGGATGTCAGGCAGGAAAAGGGTCAACAGCCGTACGATGATCAAAATCCGGACACCAAAGAAATTTCTCGTCTTGAGCAGGATGTAGTGAATTACACCTTTGCCTTCGCGTCACCGAGAGGCCGGAGAAGTCTCTCCCACAATTCTTCTCTTCATTTTCTACGTACTTGCTCCTTCTGTCAACGCCGTCTCTCACCCGCCCGTGACATTTACATGTACATGGGAGATACTGCTTTTTGCAGCATGGAGTGCAGAGAGCAGAGTATGGAACAAGAGAAGTGCACTACTGCCGGCGGCGGTGGCGGCCGAGCTAAAGAGAGATGA

Homology

[Close]

BLAST of CmoCh04G008590.1 vs. TrEMBL
Match: A0A0A0KUK1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G030990 PE=4 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 8.4e-33
Identity = 79/130 (60.77%), Postives = 94/130 (72.31%), Query Frame = 1


Query: 1   MLLGN-PRPQIKRTASVSRITVDVRQEKGQQPYDDQNPDTKEISR-------LEQDVVNY 60
           MLLG  PR Q+KRTASVS ITVD+   +GQQP +DQNP T +I +       L+ DV+NY
Sbjct: 2   MLLGKRPRGQMKRTASVSGITVDLSHVEGQQPSEDQNPTTGDIPKVICSTQTLDSDVMNY 61

Query: 61  TFAFASPRGRRSLS----------HNSSLHFLRTCSFCQRRLSPARDIYMYMGDTAFCSM 113
           T +F SPRGR++LS          H SS HFLR+C+FC+RRLSP RDIYMYMGDTAFCS 
Sbjct: 62  TLSFVSPRGRKNLSPAASFNKDSDHRSSDHFLRSCTFCRRRLSPGRDIYMYMGDTAFCSA 121

[Close]

BLAST of CmoCh04G008590.1 vs. TrEMBL
Match: W9SH55_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_021540 PE=4 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 4.9e-17
Identity = 60/136 (44.12%), Postives = 80/136 (58.82%), Query Frame = 1


Query: 1   MLLGN-PRPQIKRTASVSRITVDVR---QEKGQQPYDDQNPDTKEISRLEQDVV---NYT 60
           MLLG  PRP +KRT S++ IT D+    +    QP D  NP   ++ + +Q ++   N+ 
Sbjct: 1   MLLGKRPRPPMKRTTSMTEITFDLSTNDEMMSSQPSDPHNPFKVDVRQQDQRLLAAHNHN 60

Query: 61  ------FAFASPRGRRSLSHN--SSLHFLRTCSFCQRRLSPARDIYMYMGDTAFCSMECR 118
                    ASPR  R  S +   + HFLR+CS C+RRL P RDIYMY GD+AFCS+ECR
Sbjct: 61  NNNSNHMMMASPRNHRRNSADFVETSHFLRSCSLCRRRLVPNRDIYMYRGDSAFCSLECR 120

[Close]

BLAST of CmoCh04G008590.1 vs. TrEMBL
Match: Q52KA1_ARATH (At4g39795 OS=Arabidopsis thaliana GN=At4g39795 PE=2 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 9.3e-16
Identity = 58/126 (46.03%), Postives = 72/126 (57.14%), Query Frame = 1


Query: 1   MLLGN-PRPQIKRTASVSRITVDVRQEKGQQPYDDQNPDTKEISRLEQDVV----NYTFA 60
           MLLGN PRPQ++RTAS++RIT++V          D +    + S +   VV    NY   
Sbjct: 9   MLLGNRPRPQMQRTASITRITIEV----------DGDQTAGQDSDVSMTVVDGGENYAQR 68

Query: 61  FASP----RGRRSLSHNSS-LHFLRTCSFCQRRLSPARDIYMYMGDTAFCSMECREQSME 117
           F SP    R  R     SS   FL  C FC+R L+P RDIYMY GD AFCS+ECREQ ME
Sbjct: 69  FLSPVNHQRNERKYGGRSSPSSFLVNCGFCKRGLAPGRDIYMYKGDAAFCSIECREQQME 124

[Close]

BLAST of CmoCh04G008590.1 vs. TrEMBL
Match: F4JW68_ARATH (Uncharacterized protein OS=Arabidopsis thaliana GN=At4g39795 PE=4 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 9.3e-16
Identity = 58/126 (46.03%), Postives = 72/126 (57.14%), Query Frame = 1


Query: 1   MLLGN-PRPQIKRTASVSRITVDVRQEKGQQPYDDQNPDTKEISRLEQDVV----NYTFA 60
           MLLGN PRPQ++RTAS++RIT++V          D +    + S +   VV    NY   
Sbjct: 1   MLLGNRPRPQMQRTASITRITIEV----------DGDQTAGQDSDVSMTVVDGGENYAQR 60

Query: 61  FASP----RGRRSLSHNSS-LHFLRTCSFCQRRLSPARDIYMYMGDTAFCSMECREQSME 117
           F SP    R  R     SS   FL  C FC+R L+P RDIYMY GD AFCS+ECREQ ME
Sbjct: 61  FLSPVNHQRNERKYGGRSSPSSFLVNCGFCKRGLAPGRDIYMYKGDAAFCSIECREQQME 116

[Close]

BLAST of CmoCh04G008590.1 vs. TrEMBL
Match: D7UEC0_VITVI (Putative uncharacterized protein (Fragment) OS=Vitis vinifera GN=VIT_00s1003g00010 PE=4 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 1.6e-15
Identity = 59/131 (45.04%), Postives = 70/131 (53.44%), Query Frame = 1


Query: 1   MLLGN-PRPQIKRTASVSRITVDVRQEK--GQQPYDDQNPDTKEISRLEQDVVNYTFAFA 60
           M+LG   RPQIKRT S++ ITVD+      G   YD +                +  A  
Sbjct: 9   MMLGKRARPQIKRTTSMTGITVDLGHNMVAGSNGYDPR----------------FLAATV 68

Query: 61  SPRGRRSLSHN--SSLHFLRTCSFCQRRLSPARDIYMYMGDTAFCSMECREQSMEQEKCT 120
           SPR  R  S     + HFLRTC  CQRRL P RDIYMY GDTAFCS+ECREQ M+Q++  
Sbjct: 69  SPRIHRRSSGEFMETAHFLRTCGLCQRRLQPGRDIYMYRGDTAFCSLECREQQMKQDERK 123

Query: 121 TAGGGGGRAKE 127
               G    KE
Sbjct: 129 EKYSGMASKKE 123

[Close]

BLAST of CmoCh04G008590.1 vs. TAIR10
Match: AT4G39795.1 (AT4G39795.1 Protein of unknown function (DUF581))

HSP 1 Score: 91.3 bits (225), Expect = 4.7e-19
Identity = 58/126 (46.03%), Postives = 72/126 (57.14%), Query Frame = 1


Query: 1   MLLGN-PRPQIKRTASVSRITVDVRQEKGQQPYDDQNPDTKEISRLEQDVV----NYTFA 60
           MLLGN PRPQ++RTAS++RIT++V          D +    + S +   VV    NY   
Sbjct: 1   MLLGNRPRPQMQRTASITRITIEV----------DGDQTAGQDSDVSMTVVDGGENYAQR 60

Query: 61  FASP----RGRRSLSHNSS-LHFLRTCSFCQRRLSPARDIYMYMGDTAFCSMECREQSME 117
           F SP    R  R     SS   FL  C FC+R L+P RDIYMY GD AFCS+ECREQ ME
Sbjct: 61  FLSPVNHQRNERKYGGRSSPSSFLVNCGFCKRGLAPGRDIYMYKGDAAFCSIECREQQME 116

[Close]

BLAST of CmoCh04G008590.1 vs. TAIR10
Match: AT1G22160.1 (AT1G22160.1 Protein of unknown function (DUF581))

HSP 1 Score: 84.0 bits (206), Expect = 7.5e-17
Identity = 53/114 (46.49%), Postives = 69/114 (60.53%), Query Frame = 1


Query: 1   MLLGN-PRPQIKRTASVSRITVDVRQEKGQQPYDDQNP--DTKEISRLEQDVVNYTF-AF 60
           MLLG   RP IKRT S+S I  D+ Q   Q+P D Q    +  E  ++ Q +++    A 
Sbjct: 1   MLLGKRQRPPIKRTTSLSEIKFDLNQPSEQEPSDHQIQLVNVDEHRQVHQRLLDQRLLAM 60

Query: 61  ASPRG-RRSLSHNSSLHFLRTCSFCQRRLSPARDIYMYMGDTAFCSMECREQSM 110
            SPRG +R  S + S  FLR+CS C+R L   RDIYMY GD AFCS+ECR+Q +
Sbjct: 61  VSPRGTQRRHSSDYSEDFLRSCSLCKRLLVHGRDIYMYRGDRAFCSLECRQQQI 114

[Close]

BLAST of CmoCh04G008590.1 vs. TAIR10
Match: AT1G78020.1 (AT1G78020.1 Protein of unknown function (DUF581))

HSP 1 Score: 80.5 bits (197), Expect = 8.3e-16
Identity = 52/142 (36.62%), Postives = 70/142 (49.30%), Query Frame = 1


Query: 1   MLLGN-PRPQIKRTASVSRITVDVRQEKGQQPYDDQNPD------------TKEISRLEQ 60
           MLLG   RP I RT S+S I  D+      +P + Q P             T  + +   
Sbjct: 1   MLLGKRQRPPINRTTSLSEIKFDLNLPSESEPSNQQKPTVASPYGSNGQAVTAAVDQNRG 60

Query: 61  DVVNYTFAFASPRG---RRSLSHNSSLHFLRTCSFCQRRLSPARDIYMYMGDTAFCSMEC 120
            +     +  +PRG   R S   + + HFLR+C+ C+R L P RDIYMY GD AFCS EC
Sbjct: 61  FLDQRLLSMVTPRGNLRRHSGDFSDAGHFLRSCALCERLLVPGRDIYMYRGDKAFCSSEC 120

Query: 121 REQSMEQEKCTTAGGGGGRAKE 127
           R++ M Q++    G     AKE
Sbjct: 121 RQEQMAQDERKEKGKSAAPAKE 142

[Close]

BLAST of CmoCh04G008590.1 vs. TAIR10
Match: AT1G53885.1 (AT1G53885.1 Protein of unknown function (DUF581))

HSP 1 Score: 58.5 bits (140), Expect = 3.4e-09
Identity = 28/68 (41.18%), Postives = 40/68 (58.82%), Query Frame = 1


Query: 42  ISRLEQDVVNYTFAFASPRGRRSLSHNSSLHFLRTCSFCQRRLSPARDIYMYMGDTAFCS 101
           ++R  ++ +N     +S R  RS  + S L FL+TC  C ++L   +D+YMY GD  FCS
Sbjct: 11  VTRDSREKLNNIVIKSSLRLNRSNPNISELCFLKTCHLCNKQLHQDKDVYMYRGDLGFCS 70

Query: 102 MECREQSM 110
            ECRE  M
Sbjct: 71  RECRESQM 78

[Close]

BLAST of CmoCh04G008590.1 vs. TAIR10
Match: AT1G53903.1 (AT1G53903.1 Protein of unknown function (DUF581))

HSP 1 Score: 58.5 bits (140), Expect = 3.4e-09
Identity = 28/68 (41.18%), Postives = 40/68 (58.82%), Query Frame = 1


Query: 42  ISRLEQDVVNYTFAFASPRGRRSLSHNSSLHFLRTCSFCQRRLSPARDIYMYMGDTAFCS 101
           ++R  ++ +N     +S R  RS  + S L FL+TC  C ++L   +D+YMY GD  FCS
Sbjct: 11  VTRDSREKLNNIVIKSSLRLNRSNPNISELCFLKTCHLCNKQLHQDKDVYMYRGDLGFCS 70

Query: 102 MECREQSM 110
            ECRE  M
Sbjct: 71  RECRESQM 78

[Close]

BLAST of CmoCh04G008590.1 vs. NCBI nr
Match: gi|449462872|ref|XP_004149159.1| (PREDICTED: uncharacterized protein LOC101212822 [Cucumis sativus])

HSP 1 Score: 147.9 bits (372), Expect = 1.2e-32
Identity = 79/130 (60.77%), Postives = 94/130 (72.31%), Query Frame = 1


Query: 1   MLLGN-PRPQIKRTASVSRITVDVRQEKGQQPYDDQNPDTKEISR-------LEQDVVNY 60
           MLLG  PR Q+KRTASVS ITVD+   +GQQP +DQNP T +I +       L+ DV+NY
Sbjct: 2   MLLGKRPRGQMKRTASVSGITVDLSHVEGQQPSEDQNPTTGDIPKVICSTQTLDSDVMNY 61

Query: 61  TFAFASPRGRRSLS----------HNSSLHFLRTCSFCQRRLSPARDIYMYMGDTAFCSM 113
           T +F SPRGR++LS          H SS HFLR+C+FC+RRLSP RDIYMYMGDTAFCS 
Sbjct: 62  TLSFVSPRGRKNLSPAASFNKDSDHRSSDHFLRSCTFCRRRLSPGRDIYMYMGDTAFCSA 121

[Close]

BLAST of CmoCh04G008590.1 vs. NCBI nr
Match: gi|659107644|ref|XP_008453781.1| (PREDICTED: uncharacterized protein LOC103494409 [Cucumis melo])

HSP 1 Score: 135.6 bits (340), Expect = 6.2e-29
Identity = 76/130 (58.46%), Postives = 92/130 (70.77%), Query Frame = 1


Query: 1   MLLGN-PRPQIKRTASVSRITVDVRQEKGQQPYDD-QNPDTKEI-------SRLEQDVVN 60
           MLLG  PR Q+KRTASVS ITVD+   +GQ+P +D Q P T EI         L+ DV+N
Sbjct: 2   MLLGKRPRGQMKRTASVSGITVDLSHVEGQEPSEDHQVPTTGEIPPVICSSQSLDCDVMN 61

Query: 61  YTFAFASPRGRRSLS---------HNSSLHFLRTCSFCQRRLSPARDIYMYMGDTAFCSM 113
           YT +F SPRGR++LS         H SS HFLR+C+FC+RRLSP RDIYMYMGDTAFCS 
Sbjct: 62  YTLSFVSPRGRKNLSPAAFNKDIDHRSSDHFLRSCTFCRRRLSPGRDIYMYMGDTAFCSA 121

[Close]

BLAST of CmoCh04G008590.1 vs. NCBI nr
Match: gi|359497432|ref|XP_003635513.1| (PREDICTED: uncharacterized protein LOC100261790 [Vitis vinifera])

HSP 1 Score: 103.2 bits (256), Expect = 3.4e-19
Identity = 65/138 (47.10%), Postives = 78/138 (56.52%), Query Frame = 1


Query: 1   MLLGN-PRPQIKRTASVSRITVDVRQEKGQQPYDDQNP--DTKEISRLEQDVVN------ 60
           M+LG   RPQIKRT S++ ITVD+   +   P D QNP  D    +R+E  V        
Sbjct: 1   MMLGKRARPQIKRTTSMTGITVDLGHVEAPAPADPQNPIKDVHAAARVENMVAGSNGYDP 60

Query: 61  -YTFAFASPRGRRSLSHN--SSLHFLRTCSFCQRRLSPARDIYMYMGDTAFCSMECREQS 120
            +  A  SPR  R  S     + HFLRTC  CQRRL P RDIYMY GDTAFCS+ECREQ 
Sbjct: 61  RFLAATVSPRIHRRSSGEFMETAHFLRTCGLCQRRLQPGRDIYMYRGDTAFCSLECREQQ 120

Query: 121 MEQEKCTTAGGGGGRAKE 127
           M+Q++      G    KE
Sbjct: 121 MKQDERKEKYSGMASKKE 138

[Close]

BLAST of CmoCh04G008590.1 vs. NCBI nr
Match: gi|470127350|ref|XP_004299635.1| (PREDICTED: uncharacterized protein LOC101315051 isoform X1 [Fragaria vesca subsp. vesca])

HSP 1 Score: 97.1 bits (240), Expect = 2.4e-17
Identity = 59/127 (46.46%), Postives = 73/127 (57.48%), Query Frame = 1


Query: 1   MLLGN-PRPQIKRTASVSRITVDVRQEKGQQPYDDQNPDTKEISRLEQDVVNYTFAFASP 60
           MLLG  PRP +KRT S+S IT D+  E   QP D  NP     S L  D +    A +S 
Sbjct: 1   MLLGKRPRPPMKRTTSMSEITFDLSTEAQPQPSDPLNP----FSPLAVDGLMVKMASSSS 60

Query: 61  RGRRSLSHNSS-----LHFLRTCSFCQRRLSPARDIYMYMGDTAFCSMECREQSM----E 118
              R+   NS+      HFLR C  C+RRL P RDIYMY GDTAFCS+ECR+Q M     
Sbjct: 61  PSPRNHRRNSADFVETPHFLRACGLCKRRLVPGRDIYMYRGDTAFCSLECRQQQMTLDER 120

[Close]

BLAST of CmoCh04G008590.1 vs. NCBI nr
Match: gi|703135491|ref|XP_010105883.1| (hypothetical protein L484_021540 [Morus notabilis])

HSP 1 Score: 95.5 bits (236), Expect = 7.1e-17
Identity = 60/136 (44.12%), Postives = 80/136 (58.82%), Query Frame = 1


Query: 1   MLLGN-PRPQIKRTASVSRITVDVR---QEKGQQPYDDQNPDTKEISRLEQDVV---NYT 60
           MLLG  PRP +KRT S++ IT D+    +    QP D  NP   ++ + +Q ++   N+ 
Sbjct: 1   MLLGKRPRPPMKRTTSMTEITFDLSTNDEMMSSQPSDPHNPFKVDVRQQDQRLLAAHNHN 60

Query: 61  ------FAFASPRGRRSLSHN--SSLHFLRTCSFCQRRLSPARDIYMYMGDTAFCSMECR 118
                    ASPR  R  S +   + HFLR+CS C+RRL P RDIYMY GD+AFCS+ECR
Sbjct: 61  NNNSNHMMMASPRNHRRNSADFVETSHFLRSCSLCRRRLVPNRDIYMYRGDSAFCSLECR 120

The following BLAST results are available for this feature:

BLAST of CmoCh04G008590.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmoCh04G008590.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KUK1_CUCSA	8.4e-33	60.77	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G030990 PE=4 SV=1	[more]
W9SH55_9ROSA	4.9e-17	44.12	Uncharacterized protein OS=Morus notabilis GN=L484_021540 PE=4 SV=1	[more]
Q52KA1_ARATH	9.3e-16	46.03	At4g39795 OS=Arabidopsis thaliana GN=At4g39795 PE=2 SV=1	[more]
F4JW68_ARATH	9.3e-16	46.03	Uncharacterized protein OS=Arabidopsis thaliana GN=At4g39795 PE=4 SV=1	[more]
D7UEC0_VITVI	1.6e-15	45.04	Putative uncharacterized protein (Fragment) OS=Vitis vinifera GN=VIT_00s1003g000...	[more]

BLAST of CmoCh04G008590.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G39795.1	4.7e-19	46.03	Protein of unknown function (DUF581)	[more]
AT1G22160.1	7.5e-17	46.49	Protein of unknown function (DUF581)	[more]
AT1G78020.1	8.3e-16	36.62	Protein of unknown function (DUF581)	[more]
AT1G53885.1	3.4e-09	41.18	Protein of unknown function (DUF581)	[more]
AT1G53903.1	3.4e-09	41.18	Protein of unknown function (DUF581)	[more]

BLAST of CmoCh04G008590.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449462872\|ref\|XP_004149159.1\|	1.2e-32	60.77	PREDICTED: uncharacterized protein LOC101212822 [Cucumis sativus]	[more]
gi\|659107644\|ref\|XP_008453781.1\|	6.2e-29	58.46	PREDICTED: uncharacterized protein LOC103494409 [Cucumis melo]	[more]
gi\|359497432\|ref\|XP_003635513.1\|	3.4e-19	47.10	PREDICTED: uncharacterized protein LOC100261790 [Vitis vinifera]	[more]
gi\|470127350\|ref\|XP_004299635.1\|	2.4e-17	46.46	PREDICTED: uncharacterized protein LOC101315051 isoform X1 [Fragaria vesca subsp...	[more]
gi\|703135491\|ref\|XP_010105883.1\|	7.1e-17	44.12	hypothetical protein L484_021540 [Morus notabilis]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR007650	Zf-FLZ_dom

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmoCh04G008590	CmoCh04G008590	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmoCh04G008590.1	CmoCh04G008590.1-protein	polypeptide

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh04G008590.1.three_prime_UTR.1	CmoCh04G008590.1.three_prime_UTR.1	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh04G008590.1.CDS.2	CmoCh04G008590.1.CDS.2	CDS
CmoCh04G008590.1.CDS.1	CmoCh04G008590.1.CDS.1	CDS

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh04G008590.1.exon.2	CmoCh04G008590.1.exon.2	exon
CmoCh04G008590.1.exon.1	CmoCh04G008590.1.exon.1	exon

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007650	Zf-FLZ domain	PFAM	PF04570	zf-FLZ	coord: 67..113 score: 2.9
None	No IPR available	PANTHER	PTHR33059	FAMILY NOT NAMED	coord: 17..113 score: 2.1
None	No IPR available	PANTHER	PTHR33059:SF4	F28K19.24-RELATED	coord: 17..113 score: 2.1