CmoCh02G013700.1 (mRNA) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh02G013700.1
Type	mRNA
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Large subunit rib
Location	Cmo_Chr02 : 8121695 .. 8125108 (+)
Sequence length	1181

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGCCGGAGAAATGGGGGAAAGAAGAGTTGCTAAAGGACTGGATAGACTACTCGACCTTCGATAGAATCTTGACTGCTGACAGAATCGCGTCGGCGAGGGCGTCACTTGTGGCGGAGGGGCGGCGGAGCAGCCCCCGATCCAGTTCACGGTCACCGTTGAGGGTAGAAAGTAGGTGTTGAGATGGAAATATGTATTGAAATTACTTTATAGACAAACAAACCCGGTTCATAAAAAATTATTAGCTCGCTTCGTCTTGTCAGTGATTTATTTCCTACGTTAAAGGTTGTAATTTATTAGTGTACTCGGGTTGAATTGAATTTTTTTTAATAAAATTTTATAAAATTCAAATATCAAACATTTACAAGCTACTGTGGATTACTAACATATGTTACAAAAATTTCTTAATTATTGTTCGGGTTTTGTTACGAACCATATTTTTAAATAATCAGGTTGACCTGATTAAAAAATCTACCGTTCATAATTGAACCGAGCACAGGTTAATTATGGATTATACGAAAGAATTACATTTAATTATATAGTTTTTGAGCTATATTACTAAATTTTGTGAGCAAACGTTATTATTTGATAATTATTTATACCACGTGTTAATTACGTATTATATGAGAATCTATTTAAGTTTAATTGCTTATTATAAAATTTTGAAAGTACAATAACTAAATAAAATACATATGGTAGAAAAACGAGCCCTCAAGGCCCATGTTCAAGGCCCATTGGACAACAAGTTTGGCCAATATTGGGCCCAATATGAACATGGCCGTACAGCCCGGCCCATGATCGTGTTCGCAAAATTACGGTCCTCCTATCATAGGTTTATCACCGCGCCTTCTTTTTGGATCGCATCTCTTCGGTCGTCCATTATATATCTATTGTCAGCTGCCGTCGAAAAACCCTAGCTTAGCTTCTTCTCACCAGGTACGAATCTACACTCTTTCGAACTGAGATTTATTTTTGTTGAAACTGCTACTTAATTCTATTGCGCTGCGGCATTTTTTTTCGTCTTGTTTGTTCTTCCTTAATTTGATATTCAGTTCTTGTTTATCTCTATCTTGTATTTTTTACTCGTGTGGTTGTTCGTTTACTTCGTGTTTTGATTAGGTTTGTTCCTTTTTTCTTCTTTTCAGTGAGTCTGTAGCTGCTCCTTGAAAAGAAAGGGTTCCGAAAATGAGGTATGTCGAACTGTTTTTCCTTATAGTTTATATACTGTTCAGAATCTTGTTTAGAACACGATTTTGATTAGTGCTTCTGCGGCTGTTTATGTTAAATATGCCGTGGCTATAAATTTAGTTCGCGTTCTTTTCTCCTGGAAGATTTGGAAGTATGAAGTTGCATCGTAAGAATTTATATGCCGTGGCTATAAATTTAGTTCTCATTCTTTTCTCCTGGAAGATTTGGAAGTATGAAGTTGCATCGTTGGAATTTATATGCTGTGGCTATAAATTTAGTTCGCATTCTTTTCTCCTGGAAAATTTGGAAGTATGAAGTAGGAATTTACTTGAGCTATATTTTGAAGAGTTCATGTTTCTACCAATTCTGGAGTTTACAATACTTGTTCATACGTTTATAATAAATTGAAATTTTGTTTATTGGAGGCTTTTGGTTTGTATCAGTTGCGTTACGTGTTTTTTTGAATTTACTGAATGTAGTTTTGCTGGTTTATATCTGCAGCAAACTTCAGAGTGAAGCGTTGAGAGAAGCCATTTCATCTATCTTTGGTGATAGCACTGAAAAGAAGCGCAACTTTACTGAGACTATTGAACTTCAGATTGGACTGAAGAACTATGATCCTCAGAAGGACAAGCGTTTCAGTGGATCAGTGAAGTTGCCCCATATCCCTCGCCCTAAGATGAAGCTTTGCATGCTTGGAGATGCTTTGCACGTTGAAGAGGTAGGCTTTATATTCTCGTAACCTTTCCACTTGTCTTGTCCAGTTACTGTTGTCCTTGTTTTTTCTTCTGTGTGGAGTGATGACTCTTTATTTTTTGGGTAATCTGATCTGGCTAGCTTCTCAACTCTAATAGTACTATTTTGTGTGAGGCTTGGTGTATTTTATGTCATAATCCTACTAGCTACCGTGTTTAAGAATATTTATGAAGTTTTCAACGGCAATTAGATCTGGATAATAAGTTTATGGTCGTTTCCATTTGTGTTCTATAGGCATGATGCTGAATTCTGTATGAGCATTATAAGTGACTTCGTACTTGTTGTGGAAAACAATATACTTTAGCATTTCATGCATAGTAAATAGAAATTTCTAAACTGTTGTACGTCAGCTCTATCCGTTTACTAAAATGTGCGGATGCTTATTCTAGGCAGAGAAGATTGGTATGGATTATATGGATGTGGAAGGTTTGAAGAAGCTAAACAAGAACAAGAAGTTGGTGAAGAAACTTGCCAAGAAATATCATGCCTTTTTGGCATCTGAAGCTGTTATCAAGCAAATTCCCCGTCTTTTGGGCCCTGGGCTCAACAAGGCAGGCAAGTGTTCTGAACTACTAGACATCCGGAATTTACCCTTTTGATCGTTAGTAAGTTCTTGTTAGTTTTATCGTCGTGGTGATGCAAGCTAGTGGCATCTGAAAGGCTCTCGATAGACTGCATGCTTGTAAATTGAATTCCTATCTTTTCTTTTGAAAATGCTGTTTTGTTTTGCACAGCTCACATAAGTAAGTCATATTTTCGTAGTTCTTACTAACATCGACATGTACATTGTCGTTACAGGTAAGTTCCCTACCCTGGTTACTCACCAAGAATCCCTCGAGTCTAAAGTCAACGAGACAAAGGCAATGGTTAAGTTTCAGCTAAAAAAGGTTCTTTGCATGGGTGTTGCCGTCGGTAACGTCGCCATGGAGGAGAAGCAAGTTTTTCAGAACGTTCAAATGAGTGTCAATTTCCTTGTTTCCTTGTTGAAAAAGAATTGGCAAAACGTAAGTCACTGGCATACTTTCCCCCCATGTCATTTTAGTTCTTTGATTATAATCACACCTTCGTATTTTGATTAAAGAACATACTAACACATAATCAATCCTTGTCCTTGTGTCGACTTATGGAGATTGGATGTTTCTTCTTGTTCATCAGGTGAGGTGCTTGTACCTGAAGAGTACTATGGGAAAGGCATATCGAGTCTTCTGAGAACTTTTCAAATTTTAGATAGTACTGTTTGCTCTTTCGTTTAAGAACCAACCAGGTTGAGGTGAAGTTCTATATTATGATTGGTAAAAGTTTTCCTGTTTATTTTTCTTTTATTTATTTTTTGTTTAGCACAACAAAACCATTAGCTGCACAATCTTTAACACTCGTGATGGGAGTAATGTTTTCTTCTTTCCTTTTGTTCTCTTATGTTTTGTAGATTTTTTTTTTCAATTTATAATATATTCAATTAATAATTCAAA

mRNA sequence

ATGGTGCCGGAGAAATGGGGGAAAGAAGAGTTGCTAAAGGACTGGATAGACTACTCGACCTTCGATAGAATCTTGACTGCTGACAGAATCGCGTCGGCGAGGGCGTCACTTGTGGCGGAGGGGCGGCGGAGCAGCCCCCGATCCAGTTCACGGTCACCGTTGAGGGTAGAAAGTAGTGCTTCTGCGGCTGTTTATGTTAAATATGCCGTGGCTATAAATTTAGTTCGCGTTCTTTTCTCCTGGAAGATTTGGAAGTATGAAGTTGCATCCAAACTTCAGAGTGAAGCGTTGAGAGAAGCCATTTCATCTATCTTTGGTGATAGCACTGAAAAGAAGCGCAACTTTACTGAGACTATTGAACTTCAGATTGGACTGAAGAACTATGATCCTCAGAAGGACAAGCGTTTCAGTGGATCAGTGAAGTTGCCCCATATCCCTCGCCCTAAGATGAAGCTTTGCATGCTTGGAGATGCTTTGCACGTTGAAGAGGCAGAGAAGATTGGTATGGATTATATGGATGTGGAAGGTTTGAAGAAGCTAAACAAGAACAAGAAGTTGGTGAAGAAACTTGCCAAGAAATATCATGCCTTTTTGGCATCTGAAGCTGTTATCAAGCAAATTCCCCGTCTTTTGGGCCCTGGGCTCAACAAGGCAGGCAAGTGTAAGTTCCCTACCCTGGTTACTCACCAAGAATCCCTCGAGTCTAAAGTCAACGAGACAAAGGCAATGGTTAAGTTTCAGCTAAAAAAGGTTCTTTGCATGGGTGTTGCCGTCGGTAACGTCGCCATGGAGGAGAAGCAAGTTTTTCAGAACGTTCAAATGAGTGTCAATTTCCTTGTTTCCTTGTTGAAAAAGAATTGGCAAAACGTGAGGTGCTTGTACCTGAAGAGTACTATGGGAAAGGCATATCGAGTCTTCTGAGAACTTTTCAAATTTTAGATAGTACTGTTTGCTCTTTCGTTTAAGAACCAACCAGGTTGAGGTGAAGTTCTATATTATGATTGGTAAAAGTTTTCCTGTTTATTTTTCTTTTATTTATTTTTTGTTTAGCACAACAAAACCATTAGCTGCACAATCTTTAACACTCGTGATGGGAGTAATGTTTTCTTCTTTCCTTTTGTTCTCTTATGTTTTGTAGATTTTTTTTTTCAATTTATAATATATTCAATTAATAATTCAAA

Coding sequence (CDS)

ATGGTGCCGGAGAAATGGGGGAAAGAAGAGTTGCTAAAGGACTGGATAGACTACTCGACCTTCGATAGAATCTTGACTGCTGACAGAATCGCGTCGGCGAGGGCGTCACTTGTGGCGGAGGGGCGGCGGAGCAGCCCCCGATCCAGTTCACGGTCACCGTTGAGGGTAGAAAGTAGTGCTTCTGCGGCTGTTTATGTTAAATATGCCGTGGCTATAAATTTAGTTCGCGTTCTTTTCTCCTGGAAGATTTGGAAGTATGAAGTTGCATCCAAACTTCAGAGTGAAGCGTTGAGAGAAGCCATTTCATCTATCTTTGGTGATAGCACTGAAAAGAAGCGCAACTTTACTGAGACTATTGAACTTCAGATTGGACTGAAGAACTATGATCCTCAGAAGGACAAGCGTTTCAGTGGATCAGTGAAGTTGCCCCATATCCCTCGCCCTAAGATGAAGCTTTGCATGCTTGGAGATGCTTTGCACGTTGAAGAGGCAGAGAAGATTGGTATGGATTATATGGATGTGGAAGGTTTGAAGAAGCTAAACAAGAACAAGAAGTTGGTGAAGAAACTTGCCAAGAAATATCATGCCTTTTTGGCATCTGAAGCTGTTATCAAGCAAATTCCCCGTCTTTTGGGCCCTGGGCTCAACAAGGCAGGCAAGTGTAAGTTCCCTACCCTGGTTACTCACCAAGAATCCCTCGAGTCTAAAGTCAACGAGACAAAGGCAATGGTTAAGTTTCAGCTAAAAAAGGTTCTTTGCATGGGTGTTGCCGTCGGTAACGTCGCCATGGAGGAGAAGCAAGTTTTTCAGAACGTTCAAATGAGTGTCAATTTCCTTGTTTCCTTGTTGAAAAAGAATTGGCAAAACGTGAGGTGCTTGTACCTGAAGAGTACTATGGGAAAGGCATATCGAGTCTTCTGA

Homology

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BLAST of CmoCh02G013700.1 vs. Swiss-Prot
Match: R10A_ORYSJ (60S ribosomal protein L10a OS=Oryza sativa subsp. japonica GN=RPL10A PE=1 SV=1)

HSP 1 Score: 375.2 bits (962), Expect = 7.0e-103
Identity = 190/217 (87.56%), Postives = 203/217 (93.55%), Query Frame = 1


Query: 90  SKLQSEALREAISSIFGDSTEKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPK 149
           SKLQSE L+EAIS + G+S EK R FTET+ELQIGLKNYDPQKDKRFSGSVKLPHIPRPK
Sbjct: 2   SKLQSEVLKEAISQVVGESKEKGRKFTETVELQIGLKNYDPQKDKRFSGSVKLPHIPRPK 61

Query: 150 MKLCMLGDALHVEEAEKIGMDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIPR 209
           MK+CMLGDA HVEEAEKIG+DYMDVE LKK+NKNKKLVKKLAKKYHAFLASEA+IKQIPR
Sbjct: 62  MKVCMLGDAQHVEEAEKIGLDYMDVEALKKMNKNKKLVKKLAKKYHAFLASEAIIKQIPR 121

Query: 210 LLGPGLNKAGKCKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVF 269
           LLGPGLNKAG  KFPTLVTHQESLESKVNETKA VKFQLKKVLCMGVAVGN++MEEKQ+ 
Sbjct: 122 LLGPGLNKAG--KFPTLVTHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIQ 181

Query: 270 QNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYRVF 307
           QN+QMSVNFLVSLLKKNWQNVRCLY+KSTMGK  RVF
Sbjct: 182 QNIQMSVNFLVSLLKKNWQNVRCLYIKSTMGKPIRVF 216

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BLAST of CmoCh02G013700.1 vs. Swiss-Prot
Match: R10A_ORYSI (60S ribosomal protein L10a OS=Oryza sativa subsp. indica GN=RPL10A PE=3 SV=1)

HSP 1 Score: 375.2 bits (962), Expect = 7.0e-103
Identity = 190/217 (87.56%), Postives = 203/217 (93.55%), Query Frame = 1


Query: 90  SKLQSEALREAISSIFGDSTEKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPK 149
           SKLQSE L+EAIS + G+S EK R FTET+ELQIGLKNYDPQKDKRFSGSVKLPHIPRPK
Sbjct: 2   SKLQSEVLKEAISQVVGESKEKGRKFTETVELQIGLKNYDPQKDKRFSGSVKLPHIPRPK 61

Query: 150 MKLCMLGDALHVEEAEKIGMDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIPR 209
           MK+CMLGDA HVEEAEKIG+DYMDVE LKK+NKNKKLVKKLAKKYHAFLASEA+IKQIPR
Sbjct: 62  MKVCMLGDAQHVEEAEKIGLDYMDVEALKKMNKNKKLVKKLAKKYHAFLASEAIIKQIPR 121

Query: 210 LLGPGLNKAGKCKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVF 269
           LLGPGLNKAG  KFPTLVTHQESLESKVNETKA VKFQLKKVLCMGVAVGN++MEEKQ+ 
Sbjct: 122 LLGPGLNKAG--KFPTLVTHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIQ 181

Query: 270 QNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYRVF 307
           QN+QMSVNFLVSLLKKNWQNVRCLY+KSTMGK  RVF
Sbjct: 182 QNIQMSVNFLVSLLKKNWQNVRCLYIKSTMGKPIRVF 216

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BLAST of CmoCh02G013700.1 vs. Swiss-Prot
Match: R10A1_ARATH (60S ribosomal protein L10a-1 OS=Arabidopsis thaliana GN=RPL10AA PE=1 SV=1)

HSP 1 Score: 370.5 bits (950), Expect = 1.7e-101
Identity = 190/217 (87.56%), Postives = 203/217 (93.55%), Query Frame = 1


Query: 90  SKLQSEALREAISSIFGDSTEKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPK 149
           SKLQSEA+REAI++I G S  KKRNF ETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPK
Sbjct: 2   SKLQSEAVREAITTITGKSEAKKRNFVETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPK 61

Query: 150 MKLCMLGDALHVEEAEKIGMDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIPR 209
           MK+CMLGDA HVEEAEK+G++ MDVE LKKLNKNKKLVKKLAKKYHAFLASE+VIKQIPR
Sbjct: 62  MKICMLGDAQHVEEAEKMGLENMDVESLKKLNKNKKLVKKLAKKYHAFLASESVIKQIPR 121

Query: 210 LLGPGLNKAGKCKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVF 269
           LLGPGLNKAG  KFPTLV+HQESLESKVNETKA VKFQLKKVLCMGVAVGN++MEEKQ+F
Sbjct: 122 LLGPGLNKAG--KFPTLVSHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIF 181

Query: 270 QNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYRVF 307
           QNVQMSVNFLVSLLKKNWQNVRCLYLKSTMG   R+F
Sbjct: 182 QNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPPQRIF 216

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BLAST of CmoCh02G013700.1 vs. Swiss-Prot
Match: R10A2_ARATH (60S ribosomal protein L10a-2 OS=Arabidopsis thaliana GN=RPL10AB PE=1 SV=1)

HSP 1 Score: 367.5 bits (942), Expect = 1.5e-100
Identity = 188/217 (86.64%), Postives = 202/217 (93.09%), Query Frame = 1


Query: 90  SKLQSEALREAISSIFGDSTEKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPK 149
           SKLQSEA+REAI++I G S EKKRNF ET+ELQIGLKNYDPQKDKRFSGSVKLPHIPRPK
Sbjct: 2   SKLQSEAVREAITTIKGKSEEKKRNFVETVELQIGLKNYDPQKDKRFSGSVKLPHIPRPK 61

Query: 150 MKLCMLGDALHVEEAEKIGMDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIPR 209
           MK+CMLGDA HVEEAEK+G+  MDVE LKKLNKNKKLVKKLAK YHAFLASE+VIKQIPR
Sbjct: 62  MKICMLGDAQHVEEAEKMGLSNMDVEALKKLNKNKKLVKKLAKSYHAFLASESVIKQIPR 121

Query: 210 LLGPGLNKAGKCKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVF 269
           LLGPGLNKAG  KFPTLV+HQESLE+KVNETKA VKFQLKKVLCMGVAVGN++MEEKQ+F
Sbjct: 122 LLGPGLNKAG--KFPTLVSHQESLEAKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQLF 181

Query: 270 QNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYRVF 307
           QNVQMSVNFLVSLLKKNWQNVRCLYLKSTMG   R+F
Sbjct: 182 QNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPPQRIF 216

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BLAST of CmoCh02G013700.1 vs. Swiss-Prot
Match: R10A3_ARATH (60S ribosomal protein L10a-3 OS=Arabidopsis thaliana GN=RPL10AC PE=1 SV=1)

HSP 1 Score: 365.2 bits (936), Expect = 7.2e-100
Identity = 191/218 (87.61%), Postives = 202/218 (92.66%), Query Frame = 1


Query: 90  SKLQSEALREAISSIFGDSTEKK-RNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 149
           SKLQSEA+REAISSI     E K RNFTETIELQIGLKNYDPQKDKRFSGSVKLPH+PRP
Sbjct: 2   SKLQSEAVREAISSIITHCKETKPRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHVPRP 61

Query: 150 KMKLCMLGDALHVEEAEKIGMDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP 209
           KMK+CMLGDA HVEEAEKIG++ MDVE LKKLNKNKKLVKKLAKK+HAFLASE+VIKQIP
Sbjct: 62  KMKICMLGDAQHVEEAEKIGLESMDVEALKKLNKNKKLVKKLAKKFHAFLASESVIKQIP 121

Query: 210 RLLGPGLNKAGKCKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQV 269
           RLLGPGLNKAG  KFPTLV+HQESLESKVNETKA VKFQLKKVLCMGVAVGN++MEEKQ+
Sbjct: 122 RLLGPGLNKAG--KFPTLVSHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQI 181

Query: 270 FQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYRVF 307
           FQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMG   RVF
Sbjct: 182 FQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPPNRVF 217

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BLAST of CmoCh02G013700.1 vs. TrEMBL
Match: F6HHG2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_06s0080g00400 PE=4 SV=1)

HSP 1 Score: 429.9 bits (1104), Expect = 2.7e-117
Identity = 231/317 (72.87%), Postives = 263/317 (82.97%), Query Frame = 1


Query: 1   MVPEKWGKEELLKDWIDYSTFDRILTADRIASARASLVAEGRRSSPRSSSRSPLRVESSA 60
           ++P+KWGKE+LLK+WIDYS+FD +L  + I  AR +LVA GR +S +      LR+ S  
Sbjct: 73  LIPDKWGKEDLLKEWIDYSSFDALLAPNGIGVAREALVAAGRGASTQG-----LRISSRL 132

Query: 61  SAAVYVKYAVAINLVRVLFSWKIWKYE-----------VASKLQSEALREAISSIFGDST 120
           +A V+   +    +V  L   + +K+E             +KLQS+ALREAI++I  +S 
Sbjct: 133 AARVFFISSGKKPVVDPL-EGRGFKHERSVHPTWINEDAGAKLQSDALREAITNIVNESK 192

Query: 121 EKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKLCMLGDALHVEEAEKIGM 180
           EKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMK+CMLGDA HVEEAEKIG+
Sbjct: 193 EKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKVCMLGDAQHVEEAEKIGL 252

Query: 181 DYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIPRLLGPGLNKAGKCKFPTLVTH 240
           +YMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIPRLLGPGLNKAGK  FPTLVTH
Sbjct: 253 EYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIPRLLGPGLNKAGKKIFPTLVTH 312

Query: 241 QESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVFQNVQMSVNFLVSLLKKNWQN 300
           QESLESKVNETKAMVKFQLKKVLCMGVAVGN +MEEKQ+FQNVQ+SVNFLVSLLKKNWQN
Sbjct: 313 QESLESKVNETKAMVKFQLKKVLCMGVAVGNCSMEEKQIFQNVQLSVNFLVSLLKKNWQN 372

Query: 301 VRCLYLKSTMGKAYRVF 307
           VRCLYLKSTMG++ RVF
Sbjct: 373 VRCLYLKSTMGRSNRVF 383

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BLAST of CmoCh02G013700.1 vs. TrEMBL
Match: A0A0A0KEW8_CUCSA (Ribosomal protein OS=Cucumis sativus GN=Csa_6G152330 PE=3 SV=1)

HSP 1 Score: 401.0 bits (1029), Expect = 1.3e-108
Identity = 206/217 (94.93%), Postives = 211/217 (97.24%), Query Frame = 1


Query: 90  SKLQSEALREAISSIFGDSTEKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPK 149
           SKLQS+ALREAISSIF DS EKKR FTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPK
Sbjct: 2   SKLQSDALREAISSIFADSGEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPK 61

Query: 150 MKLCMLGDALHVEEAEKIGMDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIPR 209
           MK+CMLGDA HVEEAEKIG+DYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEA+IKQIPR
Sbjct: 62  MKICMLGDASHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAIIKQIPR 121

Query: 210 LLGPGLNKAGKCKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVF 269
           LLGPGLNKAG  KFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGN+AMEEKQVF
Sbjct: 122 LLGPGLNKAG--KFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNIAMEEKQVF 181

Query: 270 QNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYRVF 307
           QNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYRVF
Sbjct: 182 QNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYRVF 216

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BLAST of CmoCh02G013700.1 vs. TrEMBL
Match: A0A0A0LVE6_CUCSA (Ribosomal protein OS=Cucumis sativus GN=Csa_1G163140 PE=3 SV=1)

HSP 1 Score: 393.7 bits (1010), Expect = 2.1e-106
Identity = 200/217 (92.17%), Postives = 211/217 (97.24%), Query Frame = 1


Query: 90  SKLQSEALREAISSIFGDSTEKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPK 149
           SKLQS+ALREAISSIF DS EKKR FTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPK
Sbjct: 2   SKLQSDALREAISSIFTDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPK 61

Query: 150 MKLCMLGDALHVEEAEKIGMDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIPR 209
           MK+CMLGDA H+EEAEKIG++YMDVEGLKKLNKNKKLVKKLAKKYHAFLASE++IKQIPR
Sbjct: 62  MKICMLGDASHIEEAEKIGLEYMDVEGLKKLNKNKKLVKKLAKKYHAFLASESIIKQIPR 121

Query: 210 LLGPGLNKAGKCKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVF 269
           LLGPGLNKAG  KFPTLVTHQE+LESKVNETKAMVKFQLKKVLCMGVAVGNV+M+EKQVF
Sbjct: 122 LLGPGLNKAG--KFPTLVTHQETLESKVNETKAMVKFQLKKVLCMGVAVGNVSMDEKQVF 181

Query: 270 QNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYRVF 307
           QNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGK+YRVF
Sbjct: 182 QNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 216

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BLAST of CmoCh02G013700.1 vs. TrEMBL
Match: V7BVM2_PHAVU (Ribosomal protein OS=Phaseolus vulgaris GN=PHAVU_005G123700g PE=3 SV=1)

HSP 1 Score: 391.7 bits (1005), Expect = 8.0e-106
Identity = 200/217 (92.17%), Postives = 208/217 (95.85%), Query Frame = 1


Query: 90  SKLQSEALREAISSIFGDSTEKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPK 149
           SKLQS+ALREAIS I GDS EK RNF ETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPK
Sbjct: 2   SKLQSDALREAISGIMGDSKEKNRNFVETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPK 61

Query: 150 MKLCMLGDALHVEEAEKIGMDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIPR 209
           MK+CMLGDA HVEEAEKIG+DYMDVE LKKLNKNKKLVKKLAKKYHAFLASEAVIKQIPR
Sbjct: 62  MKICMLGDAQHVEEAEKIGLDYMDVEALKKLNKNKKLVKKLAKKYHAFLASEAVIKQIPR 121

Query: 210 LLGPGLNKAGKCKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVF 269
           LLGPGLNKAG  KFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNV+M+EKQ+F
Sbjct: 122 LLGPGLNKAG--KFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVSMDEKQIF 181

Query: 270 QNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYRVF 307
           QNVQ+SVNFLVSLLKKNWQNVRCLYLKSTMGK+YRVF
Sbjct: 182 QNVQLSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 216

[Close]

BLAST of CmoCh02G013700.1 vs. TrEMBL
Match: A0A0S3SGW2_PHAAN (Ribosomal protein OS=Vigna angularis var. angularis GN=Vigan.07G074200 PE=3 SV=1)

HSP 1 Score: 391.7 bits (1005), Expect = 8.0e-106
Identity = 200/217 (92.17%), Postives = 208/217 (95.85%), Query Frame = 1


Query: 90  SKLQSEALREAISSIFGDSTEKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPK 149
           SKLQS+ALREAI+ I GDS EK RNF ETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPK
Sbjct: 2   SKLQSDALREAITGIMGDSKEKNRNFVETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPK 61

Query: 150 MKLCMLGDALHVEEAEKIGMDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIPR 209
           MK+CMLGDA HVEEAEKIG+DYMDVE LKKLNKNKKLVKKLAKKYHAFLASEAVIKQIPR
Sbjct: 62  MKICMLGDAQHVEEAEKIGLDYMDVEALKKLNKNKKLVKKLAKKYHAFLASEAVIKQIPR 121

Query: 210 LLGPGLNKAGKCKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVF 269
           LLGPGLNKAG  KFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNV+MEEKQ+F
Sbjct: 122 LLGPGLNKAG--KFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVSMEEKQIF 181

Query: 270 QNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYRVF 307
           QNVQ+SVNFLVSLLKKNWQNVRCLYLKSTMGK+YRVF
Sbjct: 182 QNVQLSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 216

[Close]

BLAST of CmoCh02G013700.1 vs. TAIR10
Match: AT1G08360.1 (AT1G08360.1 Ribosomal protein L1p/L10e family)

HSP 1 Score: 370.5 bits (950), Expect = 9.7e-103
Identity = 190/217 (87.56%), Postives = 203/217 (93.55%), Query Frame = 1


Query: 90  SKLQSEALREAISSIFGDSTEKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPK 149
           SKLQSEA+REAI++I G S  KKRNF ETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPK
Sbjct: 2   SKLQSEAVREAITTITGKSEAKKRNFVETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPK 61

Query: 150 MKLCMLGDALHVEEAEKIGMDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIPR 209
           MK+CMLGDA HVEEAEK+G++ MDVE LKKLNKNKKLVKKLAKKYHAFLASE+VIKQIPR
Sbjct: 62  MKICMLGDAQHVEEAEKMGLENMDVESLKKLNKNKKLVKKLAKKYHAFLASESVIKQIPR 121

Query: 210 LLGPGLNKAGKCKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVF 269
           LLGPGLNKAG  KFPTLV+HQESLESKVNETKA VKFQLKKVLCMGVAVGN++MEEKQ+F
Sbjct: 122 LLGPGLNKAG--KFPTLVSHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIF 181

Query: 270 QNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYRVF 307
           QNVQMSVNFLVSLLKKNWQNVRCLYLKSTMG   R+F
Sbjct: 182 QNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPPQRIF 216

[Close]

BLAST of CmoCh02G013700.1 vs. TAIR10
Match: AT2G27530.1 (AT2G27530.1 Ribosomal protein L1p/L10e family)

HSP 1 Score: 367.5 bits (942), Expect = 8.2e-102
Identity = 188/217 (86.64%), Postives = 202/217 (93.09%), Query Frame = 1


Query: 90  SKLQSEALREAISSIFGDSTEKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPK 149
           SKLQSEA+REAI++I G S EKKRNF ET+ELQIGLKNYDPQKDKRFSGSVKLPHIPRPK
Sbjct: 2   SKLQSEAVREAITTIKGKSEEKKRNFVETVELQIGLKNYDPQKDKRFSGSVKLPHIPRPK 61

Query: 150 MKLCMLGDALHVEEAEKIGMDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIPR 209
           MK+CMLGDA HVEEAEK+G+  MDVE LKKLNKNKKLVKKLAK YHAFLASE+VIKQIPR
Sbjct: 62  MKICMLGDAQHVEEAEKMGLSNMDVEALKKLNKNKKLVKKLAKSYHAFLASESVIKQIPR 121

Query: 210 LLGPGLNKAGKCKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVF 269
           LLGPGLNKAG  KFPTLV+HQESLE+KVNETKA VKFQLKKVLCMGVAVGN++MEEKQ+F
Sbjct: 122 LLGPGLNKAG--KFPTLVSHQESLEAKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQLF 181

Query: 270 QNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYRVF 307
           QNVQMSVNFLVSLLKKNWQNVRCLYLKSTMG   R+F
Sbjct: 182 QNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPPQRIF 216

[Close]

BLAST of CmoCh02G013700.1 vs. TAIR10
Match: AT5G22440.1 (AT5G22440.1 Ribosomal protein L1p/L10e family)

HSP 1 Score: 365.2 bits (936), Expect = 4.1e-101
Identity = 191/218 (87.61%), Postives = 202/218 (92.66%), Query Frame = 1


Query: 90  SKLQSEALREAISSIFGDSTEKK-RNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 149
           SKLQSEA+REAISSI     E K RNFTETIELQIGLKNYDPQKDKRFSGSVKLPH+PRP
Sbjct: 2   SKLQSEAVREAISSIITHCKETKPRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHVPRP 61

Query: 150 KMKLCMLGDALHVEEAEKIGMDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP 209
           KMK+CMLGDA HVEEAEKIG++ MDVE LKKLNKNKKLVKKLAKK+HAFLASE+VIKQIP
Sbjct: 62  KMKICMLGDAQHVEEAEKIGLESMDVEALKKLNKNKKLVKKLAKKFHAFLASESVIKQIP 121

Query: 210 RLLGPGLNKAGKCKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQV 269
           RLLGPGLNKAG  KFPTLV+HQESLESKVNETKA VKFQLKKVLCMGVAVGN++MEEKQ+
Sbjct: 122 RLLGPGLNKAG--KFPTLVSHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQI 181

Query: 270 FQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYRVF 307
           FQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMG   RVF
Sbjct: 182 FQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPPNRVF 217

[Close]

BLAST of CmoCh02G013700.1 vs. TAIR10
Match: AT3G52740.1 (AT3G52740.1 unknown protein)

HSP 1 Score: 57.4 bits (137), Expect = 1.8e-08
Identity = 28/47 (59.57%), Postives = 34/47 (72.34%), Query Frame = 1


Query: 2   VPEKWGKEELLKDWIDYSTFDRILTADRIASARASLVAEGRRSSPRS 49
           +PE WG+EELLKDWID STFD  L    I+SAR +LV E RR++  S
Sbjct: 83  IPEIWGQEELLKDWIDCSTFDTCLVPAGISSARTALVEEARRAASAS 129

[Close]

BLAST of CmoCh02G013700.1 vs. TAIR10
Match: AT3G44450.1 (AT3G44450.1 unknown protein)

HSP 1 Score: 57.0 bits (136), Expect = 2.4e-08
Identity = 30/59 (50.85%), Postives = 40/59 (67.80%), Query Frame = 1


Query: 2   VPEKWGKEELLKDWIDYSTFDRILTADRIASARASLVAE-GRRSSPRSSSRSPLRVESS 60
           +P+ WGKE LL  W+D+STFD   T+ +I SARA+L+A+ G  +  R S    LRVESS
Sbjct: 57  IPDSWGKEGLLMGWMDFSTFDAAFTSSQIVSARAALMADSGDDAGARGSRPQRLRVESS 115

[Close]

BLAST of CmoCh02G013700.1 vs. NCBI nr
Match: gi|659117410|ref|XP_008458587.1| (PREDICTED: 60S ribosomal protein L10a-1-like [Cucumis melo])

HSP 1 Score: 401.0 bits (1029), Expect = 1.9e-108
Identity = 206/217 (94.93%), Postives = 211/217 (97.24%), Query Frame = 1


Query: 90  SKLQSEALREAISSIFGDSTEKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPK 149
           SKLQS+ALREAISSIF DS EKKR FTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPK
Sbjct: 2   SKLQSDALREAISSIFADSGEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPK 61

Query: 150 MKLCMLGDALHVEEAEKIGMDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIPR 209
           MK+CMLGDA HVEEAEKIG+DYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEA+IKQIPR
Sbjct: 62  MKICMLGDASHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAIIKQIPR 121

Query: 210 LLGPGLNKAGKCKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVF 269
           LLGPGLNKAG  KFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGN+AMEEKQVF
Sbjct: 122 LLGPGLNKAG--KFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNIAMEEKQVF 181

Query: 270 QNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYRVF 307
           QNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYRVF
Sbjct: 182 QNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYRVF 216

[Close]

BLAST of CmoCh02G013700.1 vs. NCBI nr
Match: gi|449443440|ref|XP_004139485.1| (PREDICTED: 60S ribosomal protein L10a-1 [Cucumis sativus])

HSP 1 Score: 393.7 bits (1010), Expect = 3.0e-106
Identity = 200/217 (92.17%), Postives = 211/217 (97.24%), Query Frame = 1


Query: 90  SKLQSEALREAISSIFGDSTEKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPK 149
           SKLQS+ALREAISSIF DS EKKR FTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPK
Sbjct: 2   SKLQSDALREAISSIFTDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPK 61

Query: 150 MKLCMLGDALHVEEAEKIGMDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIPR 209
           MK+CMLGDA H+EEAEKIG++YMDVEGLKKLNKNKKLVKKLAKKYHAFLASE++IKQIPR
Sbjct: 62  MKICMLGDASHIEEAEKIGLEYMDVEGLKKLNKNKKLVKKLAKKYHAFLASESIIKQIPR 121

Query: 210 LLGPGLNKAGKCKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVF 269
           LLGPGLNKAG  KFPTLVTHQE+LESKVNETKAMVKFQLKKVLCMGVAVGNV+M+EKQVF
Sbjct: 122 LLGPGLNKAG--KFPTLVTHQETLESKVNETKAMVKFQLKKVLCMGVAVGNVSMDEKQVF 181

Query: 270 QNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYRVF 307
           QNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGK+YRVF
Sbjct: 182 QNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 216

[Close]

BLAST of CmoCh02G013700.1 vs. NCBI nr
Match: gi|950957087|ref|XP_014496985.1| (PREDICTED: 60S ribosomal protein L10a [Vigna radiata var. radiata])

HSP 1 Score: 391.7 bits (1005), Expect = 1.1e-105
Identity = 200/217 (92.17%), Postives = 208/217 (95.85%), Query Frame = 1


Query: 90  SKLQSEALREAISSIFGDSTEKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPK 149
           SKLQS+ALREAI+ I GDS EK RNF ETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPK
Sbjct: 2   SKLQSDALREAITGIMGDSKEKNRNFVETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPK 61

Query: 150 MKLCMLGDALHVEEAEKIGMDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIPR 209
           MK+CMLGDA HVEEAEKIG+DYMDVE LKKLNKNKKLVKKLAKKYHAFLASEAVIKQIPR
Sbjct: 62  MKICMLGDAQHVEEAEKIGLDYMDVEALKKLNKNKKLVKKLAKKYHAFLASEAVIKQIPR 121

Query: 210 LLGPGLNKAGKCKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVF 269
           LLGPGLNKAG  KFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNV+MEEKQ+F
Sbjct: 122 LLGPGLNKAG--KFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVSMEEKQIF 181

Query: 270 QNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYRVF 307
           QNVQ+SVNFLVSLLKKNWQNVRCLYLKSTMGK+YRVF
Sbjct: 182 QNVQLSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 216

[Close]

BLAST of CmoCh02G013700.1 vs. NCBI nr
Match: gi|593699206|ref|XP_007150068.1| (hypothetical protein PHAVU_005G123700g [Phaseolus vulgaris])

HSP 1 Score: 391.7 bits (1005), Expect = 1.1e-105
Identity = 200/217 (92.17%), Postives = 208/217 (95.85%), Query Frame = 1


Query: 90  SKLQSEALREAISSIFGDSTEKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPK 149
           SKLQS+ALREAIS I GDS EK RNF ETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPK
Sbjct: 2   SKLQSDALREAISGIMGDSKEKNRNFVETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPK 61

Query: 150 MKLCMLGDALHVEEAEKIGMDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIPR 209
           MK+CMLGDA HVEEAEKIG+DYMDVE LKKLNKNKKLVKKLAKKYHAFLASEAVIKQIPR
Sbjct: 62  MKICMLGDAQHVEEAEKIGLDYMDVEALKKLNKNKKLVKKLAKKYHAFLASEAVIKQIPR 121

Query: 210 LLGPGLNKAGKCKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVF 269
           LLGPGLNKAG  KFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNV+M+EKQ+F
Sbjct: 122 LLGPGLNKAG--KFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVSMDEKQIF 181

Query: 270 QNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYRVF 307
           QNVQ+SVNFLVSLLKKNWQNVRCLYLKSTMGK+YRVF
Sbjct: 182 QNVQLSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 216

[Close]

BLAST of CmoCh02G013700.1 vs. NCBI nr
Match: gi|659071695|ref|XP_008461453.1| (PREDICTED: 60S ribosomal protein L10a-1 [Cucumis melo])

HSP 1 Score: 391.3 bits (1004), Expect = 1.5e-105
Identity = 199/217 (91.71%), Postives = 210/217 (96.77%), Query Frame = 1


Query: 90  SKLQSEALREAISSIFGDSTEKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPK 149
           SKLQS+ALREAISSIF DS EKKR FTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPK
Sbjct: 2   SKLQSDALREAISSIFTDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPK 61

Query: 150 MKLCMLGDALHVEEAEKIGMDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIPR 209
           MK+CMLGDA H+EEAEKIG++YMDVEGLKKLNKNKKLVKKLAKKYHAFLASE++IKQIPR
Sbjct: 62  MKICMLGDASHIEEAEKIGLEYMDVEGLKKLNKNKKLVKKLAKKYHAFLASESIIKQIPR 121

Query: 210 LLGPGLNKAGKCKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVF 269
           LLGPGLNKAG  KFPTLVTHQE+LESKVNETKA VKFQLKKVLCMGVAVGNV+M+EKQVF
Sbjct: 122 LLGPGLNKAG--KFPTLVTHQETLESKVNETKATVKFQLKKVLCMGVAVGNVSMDEKQVF 181

Query: 270 QNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYRVF 307
           QNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGK+YRVF
Sbjct: 182 QNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 216

The following BLAST results are available for this feature:

BLAST of CmoCh02G013700.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
R10A_ORYSJ	7.0e-103	87.56	60S ribosomal protein L10a OS=Oryza sativa subsp. japonica GN=RPL10A PE=1 SV=1	[more]
R10A_ORYSI	7.0e-103	87.56	60S ribosomal protein L10a OS=Oryza sativa subsp. indica GN=RPL10A PE=3 SV=1	[more]
R10A1_ARATH	1.7e-101	87.56	60S ribosomal protein L10a-1 OS=Arabidopsis thaliana GN=RPL10AA PE=1 SV=1	[more]
R10A2_ARATH	1.5e-100	86.64	60S ribosomal protein L10a-2 OS=Arabidopsis thaliana GN=RPL10AB PE=1 SV=1	[more]
R10A3_ARATH	7.2e-100	87.61	60S ribosomal protein L10a-3 OS=Arabidopsis thaliana GN=RPL10AC PE=1 SV=1	[more]

BLAST of CmoCh02G013700.1 vs. TrEMBL


Match Name	E-value	Identity	Description
F6HHG2_VITVI	2.7e-117	72.87	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_06s0080g00400 PE=4 SV=...	[more]
A0A0A0KEW8_CUCSA	1.3e-108	94.93	Ribosomal protein OS=Cucumis sativus GN=Csa_6G152330 PE=3 SV=1	[more]
A0A0A0LVE6_CUCSA	2.1e-106	92.17	Ribosomal protein OS=Cucumis sativus GN=Csa_1G163140 PE=3 SV=1	[more]
V7BVM2_PHAVU	8.0e-106	92.17	Ribosomal protein OS=Phaseolus vulgaris GN=PHAVU_005G123700g PE=3 SV=1	[more]
A0A0S3SGW2_PHAAN	8.0e-106	92.17	Ribosomal protein OS=Vigna angularis var. angularis GN=Vigan.07G074200 PE=3 SV=1	[more]

BLAST of CmoCh02G013700.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G08360.1	9.7e-103	87.56	Ribosomal protein L1p/L10e family	[more]
AT2G27530.1	8.2e-102	86.64	Ribosomal protein L1p/L10e family	[more]
AT5G22440.1	4.1e-101	87.61	Ribosomal protein L1p/L10e family	[more]
AT3G52740.1	1.8e-08	59.57	unknown protein	[more]
AT3G44450.1	2.4e-08	50.85	unknown protein	[more]

BLAST of CmoCh02G013700.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659117410\|ref\|XP_008458587.1\|	1.9e-108	94.93	PREDICTED: 60S ribosomal protein L10a-1-like [Cucumis melo]	[more]
gi\|449443440\|ref\|XP_004139485.1\|	3.0e-106	92.17	PREDICTED: 60S ribosomal protein L10a-1 [Cucumis sativus]	[more]
gi\|950957087\|ref\|XP_014496985.1\|	1.1e-105	92.17	PREDICTED: 60S ribosomal protein L10a [Vigna radiata var. radiata]	[more]
gi\|593699206\|ref\|XP_007150068.1\|	1.1e-105	92.17	hypothetical protein PHAVU_005G123700g [Phaseolus vulgaris]	[more]
gi\|659071695\|ref\|XP_008461453.1\|	1.5e-105	91.71	PREDICTED: 60S ribosomal protein L10a-1 [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR016094	Ribosomal protein L1, 2-layer alpha/beta-sandwich
IPR016095	Ribosomal_L1_3-a/b-sand
IPR023674	Ribosomal_L1-like

Vocabulary: **Molecular Function**
Term	Definition
GO:0003723	RNA binding

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
biological_process	GO:0042254	ribosome biogenesis
cellular_component	GO:0015934	large ribosomal subunit
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003735	structural constituent of ribosome

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmoCh02G013700	CmoCh02G013700	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmoCh02G013700.1	CmoCh02G013700.1-protein	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh02G013700.1.exon.1	CmoCh02G013700.1.exon.1	exon
CmoCh02G013700.1.exon.2	CmoCh02G013700.1.exon.2	exon
CmoCh02G013700.1.exon.3	CmoCh02G013700.1.exon.3	exon
CmoCh02G013700.1.exon.4	CmoCh02G013700.1.exon.4	exon
CmoCh02G013700.1.exon.5	CmoCh02G013700.1.exon.5	exon
CmoCh02G013700.1.exon.6	CmoCh02G013700.1.exon.6	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh02G013700.1.CDS.1	CmoCh02G013700.1.CDS.1	CDS
CmoCh02G013700.1.CDS.2	CmoCh02G013700.1.CDS.2	CDS
CmoCh02G013700.1.CDS.3	CmoCh02G013700.1.CDS.3	CDS
CmoCh02G013700.1.CDS.4	CmoCh02G013700.1.CDS.4	CDS
CmoCh02G013700.1.CDS.5	CmoCh02G013700.1.CDS.5	CDS
CmoCh02G013700.1.CDS.6	CmoCh02G013700.1.CDS.6	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh02G013700.1.three_prime_UTR.1	CmoCh02G013700.1.three_prime_UTR.1	three_prime_UTR

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR016094	Ribosomal protein L1, 2-layer alpha/beta-sandwich	GENE3D	G3DSA:3.30.190.20		coord: 94..148 score: 5.7E-48coord: 242..305 score: 5.7
IPR016095	Ribosomal protein L1, 3-layer alpha/beta-sandwich	GENE3D	G3DSA:3.40.50.790		coord: 150..241 score: 8.5
IPR023674	Ribosomal protein L1-like	unknown	SSF56808	Ribosomal protein L1	coord: 110..306 score: 1.01
None	No IPR available	PANTHER	PTHR23105	RIBOSOMAL PROTEIN L7AE FAMILY MEMBER	coord: 15..306 score: 7.2E
None	No IPR available	PANTHER	PTHR23105:SF55	SUBFAMILY NOT NAMED	coord: 15..306 score: 7.2E