CmoCh01G009050.1 (mRNA) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: CDSexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGAATGGAAAGACCCTGCGGAAGAAGCTTTGGCAGGCGGCCGAGGAATGTATGTTTATGTTCTTCATTGCATGTATATCCATCAGCGTTGTTCTATCTGTTGTTTCAATTTTCAGTTCTAAAAGAACGAGAGAGAGGCTTCTTTTAGCGATTTTTTGGCTTGATTCTTCTTTGTTATGTTTGTTAAGTACATTTGTGCTTCCTAGGTCTCTTCTTGTTTTTGTTTATCGTCTAGTTACCATAGCTTCTTGTTTATTAAGCAGATAATATCAGTTTTAGATTGACCTCTTTATCCTATCTTATCTGATCTTTTTTAGGTTTTGCATAGTGCCCCTCGCGAAAACTCTGGTTAACTCAGTCACACAGATGGTATGGTTCTAACCTTATCCACTACAGTTCTTGCTGCTGCTGCTGCTGTTATTGTTGTTTTTATTTTATTTTTCTTTGCAAAAGAAACAACTGAGTTAGCTCAAAAGAACTGTGGAAAAAAACTTGGCAATCAATGTTAGGAAACTGCAATTGTAAATGAACTGTGGCTTGATAGAATTTGGGGTTCTTAGGTTACATGTTTTTATACGATTTTACACATTTTATGCATATTAGATCTTGTGAGGCATTGAATCTTCAATGTACATAATTATTTGTGTTGAGATTCAGTAGGTAAAGTTAAGTAAAATGACGATTGAGAAGTTTCAAAATCCATTGTTTAATCAGTTATCAAGTGGTCTTAGCTTGGCCTGGTTCGTTAGTTTTGCCTCATTCTGTTCTTTCTTCCTTTTCTGAACCTAGCTCTAATTTTGAGACCACAGGTGCATGTTTTTGTTATATTTGTAAATAAGATACTCGTTAAGAAGAGTGAAAGAATTGAATGGAAGCAACCCAAAAAAGCAATGCCCCACCAACAAAGGGGCAACTAAGAGGACAATCAAAATTGCTAGAAGGAGATCCACTTGTTGGCAATTAAGGAAAGAGGAAGATTACAAAAAAAGATTAGATACATATACCCAAGTAGATGCATGAAAGGGGGCTAGATCTAGAATATCCTCCTAAGATCCCTCCAACACCCAAAGAACTACTGGCGTCCTTATCTTCTTTTGTAAGAACACTTCATGAAATAAAATTCCTATTTGATTCACATTCATTCACTGAATCCTGGTTGCATACATTACACCAATCGGGCAAAGAACCGTAGCTGAGGATTTCTAGATAATATCAGTGGAGTTAAAATAGAGAATATGCAAAAATATTAAAAAAGGGCGAGGAAAGCTCTCCTTAGCAGACGCGTTTTAAAAACCTTGAGAGAAATTCGAAAGGGAAAGTCCAAAGAGGACAATATCTGCTAGCAGTAGGCTTGGGCCGTTACATTTTCCTTTTCTTTTTATGAATTGACGATGAATAGTATTAAGAAGTGGGAACAAGCCACTTATTAATCTGCCCTTTCTGTGCAGATCATTTATCCACCTCATGGCTGCCTAACAGTGAGGTCAAATTAGGTTTATGATCAGTAGTACTAGGAAGTTGTAAAAAGCCACCTAGTCCACGCTTTCTACTAGCTACAATCTTTTTCATCTCCCCTCATGTCTGCCTATTGGTGAGACCAAAGTAGGCATTGTTGTGGGTTAGATGTTCAGCCTTGGGTTTGATTACGCCTCAGATCATTCTTCAATTTAAGCAGAGGTCCTTGATAGTGAGTTTGTGCAATTAATTTCTTCTACTACTCACAATTCATAATATGTAGCAAAATTCTTTCTGTGATATATCTTTAAGATTAATCGCTCGGAGTTTCGGATTATTGTGGGCATACATTAACAGGTTTAAGAGAAGGGTTTCATTTTCTTGGGTGCATATAACATGTTTATTGTTCTTAACCCCAATGGACATTAGGCTGCACAATTCCTTACTTTTGGATGTTTTCTGAATACAACGTGAAAGACCGACTGCCAGACCTCTAACTCGAATACTCGTGATTCTCCTTCCATTGCAGTTTAACATTGCAGCAACATCTGCAGTGCAAGCTCTTGAAAAGCCAGAACTACTTTCACCTCAGGTACTACAAGCTGGTCTCCATGAAAGGGTTGAGAAATTCATGTTGTCCGTACAAAACTCTGCATTCCACTGTGGCTTGCAGAAAACAAATTCTCCTTCTCCCGCCACTAGTTCCTTGGATCTACATGATGATGAAAGAATGGATCACTGAGTGTAAATGATCCTCATACACTTGAAACTTGAGAGATTAAGGTAGAAGGAAATTAAATTTGATAGGCCTTTTTCGTTTTTCCTCCACTTGCAGACAGTGGTCTGGTTTAGTTTCTCAAATTTTGGC ATGAATGGAAAGACCCTGCGGAAGAAGCTTTGGCAGGCGGCCGAGGAATGTATGTTTATGTTCTTCATTGCATGTATATCCATCAGCGTTGTTCTATCTGTTGTTTCAATTTTCAGTTCTAAAAGAACGAGAGAGAGGCTTCTTTTAGCGATTTTTTGGCTTGATTCTTCTTTGTTATGTTTGTTAAGTACATTTGTGCTTCCTAGGTTTTGCATAGTGCCCCTCGCGAAAACTCTGGTTAACTCAGTCACACAGATGTTTAACATTGCAGCAACATCTGCAGTGCAAGCTCTTGAAAAGCCAGAACTACTTTCACCTCAGGTACTACAAGCTGGTCTCCATGAAAGGGTTGAGAAATTCATGTTGTCCGTACAAAACTCTGCATTCCACTGTGGCTTGCAGAAAACAAATTCTCCTTCTCCCGCCACTAGTTCCTTGGATCTACATGATGATGAAAGAATGGATCACTGAGTGTAAATGATCCTCATACACTTGAAACTTGAGAGATTAAGGTAGAAGGAAATTAAATTTGATAGGCCTTTTTCGTTTTTCCTCCACTTGCAGACAGTGGTCTGGTTTAGTTTCTCAAATTTTGGC ATGAATGGAAAGACCCTGCGGAAGAAGCTTTGGCAGGCGGCCGAGGAATGTATGTTTATGTTCTTCATTGCATGTATATCCATCAGCGTTGTTCTATCTGTTGTTTCAATTTTCAGTTCTAAAAGAACGAGAGAGAGGCTTCTTTTAGCGATTTTTTGGCTTGATTCTTCTTTGTTATGTTTGTTAAGTACATTTGTGCTTCCTAGGTTTTGCATAGTGCCCCTCGCGAAAACTCTGGTTAACTCAGTCACACAGATGTTTAACATTGCAGCAACATCTGCAGTGCAAGCTCTTGAAAAGCCAGAACTACTTTCACCTCAGGTACTACAAGCTGGTCTCCATGAAAGGGTTGAGAAATTCATGTTGTCCGTACAAAACTCTGCATTCCACTGTGGCTTGCAGAAAACAAATTCTCCTTCTCCCGCCACTAGTTCCTTGGATCTACATGATGATGAAAGAATGGATCACTGA
BLAST of CmoCh01G009050.1 vs. TrEMBL
Match: A0A0A0KUT1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G649290 PE=4 SV=1) HSP 1 Score: 110.5 bits (275), Expect = 1.8e-21 Identity = 58/87 (66.67%), Postives = 68/87 (78.16%), Query Frame = 1
BLAST of CmoCh01G009050.1 vs. TrEMBL
Match: M5VN03_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013205mg PE=4 SV=1) HSP 1 Score: 68.2 bits (165), Expect = 1.0e-08 Identity = 38/83 (45.78%), Postives = 52/83 (62.65%), Query Frame = 1
BLAST of CmoCh01G009050.1 vs. TrEMBL
Match: D7TL80_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g03700 PE=4 SV=1) HSP 1 Score: 64.3 bits (155), Expect = 1.5e-07 Identity = 35/76 (46.05%), Postives = 48/76 (63.16%), Query Frame = 1
BLAST of CmoCh01G009050.1 vs. TrEMBL
Match: W9S9L8_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_012620 PE=4 SV=1) HSP 1 Score: 61.2 bits (147), Expect = 1.3e-06 Identity = 31/58 (53.45%), Postives = 42/58 (72.41%), Query Frame = 1
BLAST of CmoCh01G009050.1 vs. TrEMBL
Match: V7B4U6_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_008G126000g PE=4 SV=1) HSP 1 Score: 59.3 bits (142), Expect = 4.8e-06 Identity = 36/83 (43.37%), Postives = 48/83 (57.83%), Query Frame = 1
BLAST of CmoCh01G009050.1 vs. NCBI nr
Match: gi|778707896|ref|XP_011656083.1| (PREDICTED: uncharacterized protein LOC105435624 [Cucumis sativus]) HSP 1 Score: 110.5 bits (275), Expect = 2.6e-21 Identity = 58/87 (66.67%), Postives = 68/87 (78.16%), Query Frame = 1
BLAST of CmoCh01G009050.1 vs. NCBI nr
Match: gi|659119306|ref|XP_008459585.1| (PREDICTED: uncharacterized protein LOC103498670 isoform X2 [Cucumis melo]) HSP 1 Score: 107.5 bits (267), Expect = 2.2e-20 Identity = 58/87 (66.67%), Postives = 68/87 (78.16%), Query Frame = 1
BLAST of CmoCh01G009050.1 vs. NCBI nr
Match: gi|659119304|ref|XP_008459584.1| (PREDICTED: uncharacterized protein LOC103498670 isoform X1 [Cucumis melo]) HSP 1 Score: 107.5 bits (267), Expect = 2.2e-20 Identity = 58/87 (66.67%), Postives = 68/87 (78.16%), Query Frame = 1
BLAST of CmoCh01G009050.1 vs. NCBI nr
Match: gi|645264606|ref|XP_008237756.1| (PREDICTED: uncharacterized protein LOC103336488 [Prunus mume]) HSP 1 Score: 73.2 bits (178), Expect = 4.6e-10 Identity = 39/76 (51.32%), Postives = 54/76 (71.05%), Query Frame = 1
BLAST of CmoCh01G009050.1 vs. NCBI nr
Match: gi|595798457|ref|XP_007201390.1| (hypothetical protein PRUPE_ppa013205mg [Prunus persica]) HSP 1 Score: 68.2 bits (165), Expect = 1.5e-08 Identity = 38/83 (45.78%), Postives = 52/83 (62.65%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
|