CmoCh01G006630.1 (mRNA) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh01G006630.1
Type	mRNA
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Copper transporter
Location	Cmo_Chr01 : 3384798 .. 3386965 (+)
Sequence length	429

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATATCTAGCCGATGTAGAGTTGGTATTCCCTGACTCCACAATGATATGATATAAGAAGAACATAAAATATCTTTTATGATATCTAGCCGATGTGCAGTTAGTATTCCCCGACTCTCCACAATGATATTTTTATGATATCTAGCCGATGTGCAGTTAGTATTCCCCGACTCTCCACAATGATATGATATTGTTCACTTTGAGCATAATCTCTCGTGATTATTTCTCATGGCTTTGATTTGGGCTTCCCCAAAAAGCTTCGTACCAATAGAGTTAGTATTACTCTTTTATAAACGCATGATCATTCCTTAAATTAGCTGAGATGGGACTTTCATCATCCGACACTACACAAAATCTAGAAATAGTAAATTAGAAAAATACTACATAAATTCAAATCTACTAACAATTTACTGTAATCTTTGAATATTTTAAATCATATCTCATCTACTTTGAATAATACTTTTAATATTTCAACTACTTTTAATCGTATCTTAACCGACCAGTTGAAATTATGGAGGGTTAGAAACTCAAAGTTTGTCTTTTTCTTATCATATCTCGAGGTTTGGTCCAAAGTTCATCCAAATTTTGATCTATTAAGACTATCGAGACTTGAAAATCTAAATTCTCATCTCTACAATGTTATGACTGAGTATAAGCTCTCATCCCTCTGCTCTATGCTTTCTCAAGAGGTTTTGGATTATAAATTCATGATTTTTTCCTAAATTAGCGGAGTGATTCATCCACAAATTATTATTATTATTATTATTTAATAAAAATTTAATGGAATCAAATTTGGAAATTGAATAATAAAAATAAACTTTAGTACGAGCTAACTTGTAGTACACTCGCGAGCTTAGCTGGTAGTACAATACAGCTTCATTATTTGATTGGCTTCCGAGAAAATGAAGGAAAAACAAAGATCCATTTTCCCAAGAAAAAATGGAATTCCACATGACATTTTTCTGGGGAAAGTCGGCGGAGATTCTGTTCGCCGGCTGGCCTGGCCGGAACTCACTCTCTTACGCCATCGCCTTAGTCTTCGTCTTTCTCGTAGCCTTCGCCGTGGAGTGGCTGTCGCACACTAAACTCACCGCCTCTGTCGCCGATGACGTCTTCGCCGGCTTTGTTCAGACCGCCCTGTACGGCGTCCGGGTGGGGTTGGCTTTTGTCGTCATGCTGGCCGTCATGTCATTCAATGTCGGAGTCCTGCTTGCGGCGGTGGCCGGGTATTCGGTCGGGTTCTTGGTTTATGGGAGCCGGGTTTTTAATAGATCCAAAATTGACCTAAATTTGAATATGTCTGATATACCACCGCTTAATTGTTAATAGAGTGGAAGTTTGGAATCATAATATACATATATATTTGCCTATTTGAATTTTTGTATATTAATTTCATATATTAGGGGTATCGAGATAATATATCCAACCATAAATTTCTTCCTCGGGCCGAACAGTTCTCGTGGCATTGATTAACGTTGTTACTTAAAAATAATTGTTTTGTAATTATGCTCGAGATATCCACTAAATCTCTTCATAAGTTTTATTGATGATTATGGCAGTAAGTTGTGGATATATTTCTAGCGTACTATCTTCAAGAATTATAAAAATCTTGTTCAAAAAGAAATTGAAGATTTTCTCTCGATTGAGAGGCGTGGAGAGTCACTTCTCACGAGAGCAACTTACCATATCACAAAATGGAGTAATTGAGTGTGAAGACAGAACAATCATATACATGGTTAGAAAATATCTAGCCAGAAGCTGTAAATGGGACCACCCATGTGCTCGACAGAAATACTACAGTGATAATTGATAGTATAAAATCTAATGTTGATTATTTACTTTCAAATAACAAGCGAAATAAATTAGATGATAAAATGTTTTGGTGCGTGCGGTTAGCGATGGTAAAAAGTCTAAAATATATAGACTCTATGATCTAATGTCCTAGAAGATAGTTATATATATCTATATATATATATATATATATATTAATTTTCAAAAAGTGAGACACGACAAAGAAATACTTCTCTGACACATTTTAGTTTCACATGCACTCAATAGTGAATTTCATATGAGCACGTGTTTTTAAATGTAGTTCTCCTGAGTACAATTTTAAATTCAAAATTAAATATTTCGAAAATATATTTTTTTTCAGAAATTCCACAGTCTGA

mRNA sequence

ATGATATCTAGCCGATGTAGAGTTGCCGATGTGCAGAAAAACAAAGATCCATTTTCCCAAGAAAAAATGGAATTCCACATGACATTTTTCTGGGGAAAGTCGGCGGAGATTCTGTTCGCCGGCTGGCCTGGCCGGAACTCACTCTCTTACGCCATCGCCTTAGTCTTCGTCTTTCTCGTAGCCTTCGCCGTGGAGTGGCTGTCGCACACTAAACTCACCGCCTCTGTCGCCGATGACGTCTTCGCCGGCTTTGTTCAGACCGCCCTGTACGGCGTCCGGGTGGGGTTGGCTTTTGTCGTCATGCTGGCCGTCATGTCATTCAATGTCGGAGTCCTGCTTGCGGCGGTGGCCGGTTCTCCTGAGTACAATTTTAAATTCAAAATTAAATATTTCGAAAATATATTTTTTTTCAGAAATTCCACAGTCTGA

Coding sequence (CDS)

ATGATATCTAGCCGATGTAGAGTTGCCGATGTGCAGAAAAACAAAGATCCATTTTCCCAAGAAAAAATGGAATTCCACATGACATTTTTCTGGGGAAAGTCGGCGGAGATTCTGTTCGCCGGCTGGCCTGGCCGGAACTCACTCTCTTACGCCATCGCCTTAGTCTTCGTCTTTCTCGTAGCCTTCGCCGTGGAGTGGCTGTCGCACACTAAACTCACCGCCTCTGTCGCCGATGACGTCTTCGCCGGCTTTGTTCAGACCGCCCTGTACGGCGTCCGGGTGGGGTTGGCTTTTGTCGTCATGCTGGCCGTCATGTCATTCAATGTCGGAGTCCTGCTTGCGGCGGTGGCCGGTTCTCCTGAGTACAATTTTAAATTCAAAATTAAATATTTCGAAAATATATTTTTTTTCAGAAATTCCACAGTCTGA

Homology

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BLAST of CmoCh01G006630.1 vs. Swiss-Prot
Match: COPT1_ARATH (Copper transporter 1 OS=Arabidopsis thaliana GN=COPT1 PE=2 SV=2)

HSP 1 Score: 113.2 bits (282), Expect = 2.3e-24
Identity = 59/115 (51.30%), Postives = 76/115 (66.09%), Query Frame = 1


Query: 22  KMEFHMTFFWGKSAEILFAGWPGRNSLSYAIALVFVFLVAFAVEWLSHTKLTASVADDV- 81
           KM  HMTFFWGK+ E+LF+GWPG +S  YA+ L+FVF +A   EWL+H+ L      D  
Sbjct: 39  KMMMHMTFFWGKNTEVLFSGWPGTSSGMYALCLIFVFFLAVLTEWLAHSSLLRGSTGDSA 98

Query: 82  --FAGFVQTALYGVRVGLAFVVMLAVMSFNVGVLLAAVAGSPEYNFKFKIKYFEN 134
              AG +QTA+Y +R+GLA++VMLAVMSFN GV L A+AG       F  + F N
Sbjct: 99  NRAAGLIQTAVYTLRIGLAYLVMLAVMSFNAGVFLVALAGHAVGFMLFGSQTFRN 153

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BLAST of CmoCh01G006630.1 vs. Swiss-Prot
Match: COPT2_ARATH (Copper transporter 2 OS=Arabidopsis thaliana GN=COPT2 PE=2 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 8.1e-22
Identity = 51/97 (52.58%), Postives = 71/97 (73.20%), Query Frame = 1


Query: 23  MEFHMTFFWGKSAEILFAGWPGRNSLSYAIALVFVFLVAFAVEWLSHTK-LTASVADDVF 82
           M  HMTFFWGK+ E+LF+GWPG +S  YA+ L+ +FL+A   EWL+H+  L  S + +  
Sbjct: 28  MMMHMTFFWGKNTEVLFSGWPGTSSGMYALCLIVIFLLAVIAEWLAHSPILRVSGSTNRA 87

Query: 83  AGFVQTALYGVRVGLAFVVMLAVMSFNVGVLLAAVAG 119
           AG  QTA+Y ++ GL+++VMLAVMSFN GV + A+AG
Sbjct: 88  AGLAQTAVYTLKTGLSYLVMLAVMSFNAGVFIVAIAG 124

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BLAST of CmoCh01G006630.1 vs. Swiss-Prot
Match: COPT6_ARATH (Copper transporter 6 OS=Arabidopsis thaliana GN=COPT6 PE=2 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 1.5e-20
Identity = 51/94 (54.26%), Postives = 67/94 (71.28%), Query Frame = 1


Query: 26  HMTFFWGKSAEILFAGWPGRNSLSYAIALVFVFLVAFAVEWLSHTKLTASVADDVFA-GF 85
           HMTFFWGK+ EILF+GWPG +   Y + L+ VFL+A  VEWL+H+ +         A G 
Sbjct: 26  HMTFFWGKNTEILFSGWPGTSLGMYVLCLIVVFLLAVIVEWLAHSSILRGRGSTSRAKGL 85

Query: 86  VQTALYGVRVGLAFVVMLAVMSFNVGVLLAAVAG 119
           VQTA+Y ++ GLA++VMLAVMSFN GV + A+AG
Sbjct: 86  VQTAVYTLKTGLAYLVMLAVMSFNGGVFIVAIAG 119

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BLAST of CmoCh01G006630.1 vs. Swiss-Prot
Match: COPT3_ORYSJ (Copper transporter 3 OS=Oryza sativa subsp. japonica GN=COPT3 PE=2 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 3.5e-17
Identity = 50/100 (50.00%), Postives = 68/100 (68.00%), Query Frame = 1


Query: 20  QEKMEFHMTFFWGKSAEILFAGWPGRNSLSYAIALVFVFLVAFAVEWLSHTKL-TASVAD 79
           + K   HMTF+WGK++EILF GWPG +   YA+AL  VF +A  +E+L   ++  +S   
Sbjct: 23  RRKRYMHMTFYWGKNSEILFTGWPGASGGMYALALAAVFALAVLLEFLGSPRVQESSSLG 82

Query: 80  DVFAGFVQTALYGVRVGLAFVVMLAVMSFNVGVLLAAVAG 119
                    A++ VRVGLA+++MLA+MSFNVGVLLAAVAG
Sbjct: 83  SRRRRATAAAVHAVRVGLAYLLMLALMSFNVGVLLAAVAG 122

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BLAST of CmoCh01G006630.1 vs. Swiss-Prot
Match: COPT1_ORYSJ (Copper transporter 1 OS=Oryza sativa subsp. japonica GN=COPT1 PE=2 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 6.0e-17
Identity = 48/98 (48.98%), Postives = 65/98 (66.33%), Query Frame = 1


Query: 26  HMTFFWGKSAEILFAGWPGRNSLSYAIALVFVFLVAFAVEWLSHTKLTASVA-----DDV 85
           HMTFFWGK++E+LF  WPG     YA+AL+FVF +A  VE+L   +  A +A        
Sbjct: 34  HMTFFWGKNSEVLFTMWPGTRGGMYALALIFVFALAVIVEFLGSRRADACLAALARRAPA 93

Query: 86  FAGFVQTALYGVRVGLAFVVMLAVMSFNVGVLLAAVAG 119
             G  + A++ VRVG+A+++MLA+MSFN GV L AVAG
Sbjct: 94  AGGLARAAVHTVRVGVAYLLMLALMSFNGGVFLVAVAG 131

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BLAST of CmoCh01G006630.1 vs. TrEMBL
Match: A0A0A0LXH5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G526835 PE=4 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 5.7e-30
Identity = 73/113 (64.60%), Postives = 86/113 (76.11%), Query Frame = 1


Query: 23  MEFHMTFFWGKSAEILFAGWPGRNSLSYAIALVFVFLVAFAVEWLSHTKLTASVADDVFA 82
           ME HMTF+WGK+ EILF GWPGR+  S  I L+FVFL+AF VEWLSHTK T S  D++ A
Sbjct: 1   METHMTFYWGKTIEILFPGWPGRSFFSSVIVLIFVFLLAFTVEWLSHTKFTTSAMDNLTA 60

Query: 83  GFVQTALYGVRVGLAFVVMLAVMSFNVGVLLAAVAGSPEYNFKFKIKYFENIF 136
           G VQT LYG+RVGLAF+VMLAVMS+NVG+LLAAV G   Y+  F + Y   IF
Sbjct: 61  GLVQTILYGIRVGLAFIVMLAVMSYNVGILLAAVTG---YSIGFLV-YGSKIF 109

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BLAST of CmoCh01G006630.1 vs. TrEMBL
Match: M1AKG7_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400009540 PE=4 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 3.2e-25
Identity = 61/97 (62.89%), Postives = 76/97 (78.35%), Query Frame = 1


Query: 23  MEFHMTFFWGKSAEILFAGWPGRNSLS-YAIALVFVFLVAFAVEWLSHTKLTASVADDVF 82
           M  HMTFFWGK+AEILF+GWPG N++  Y  AL  VFL+AF VEWLSH+      A+ V 
Sbjct: 25  MMMHMTFFWGKNAEILFSGWPGYNNIGMYVFALFVVFLLAFFVEWLSHSNYIKESANHVT 84

Query: 83  AGFVQTALYGVRVGLAFVVMLAVMSFNVGVLLAAVAG 119
           AG +QTALYG+R+GLA++VML+VMSFN G+ LAA+AG
Sbjct: 85  AGLIQTALYGIRIGLAYLVMLSVMSFNGGIFLAAIAG 121

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BLAST of CmoCh01G006630.1 vs. TrEMBL
Match: E9LK44_VITVI (Copper transporter OS=Vitis vinifera GN=CTr7 PE=2 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 5.5e-25
Identity = 62/117 (52.99%), Postives = 83/117 (70.94%), Query Frame = 1


Query: 2   ISSRCRVADVQKNKDPFSQEKMEFHMTFFWGKSAEILFAGWPGRNSLSYAIALVFVFLVA 61
           + +R  + D++ +K       M  HMTFFWG S EI F+GWPG++S  YA+AL  VF ++
Sbjct: 30  VMNRTAMGDMKMDKT------MMTHMTFFWGMSTEIFFSGWPGQSSGMYAVALALVFGLS 89

Query: 62  FAVEWLSHTKLTASVADDVFAGFVQTALYGVRVGLAFVVMLAVMSFNVGVLLAAVAG 119
             VEWLSHT+   S  + + AG +QTA+YG+RVGLA++VMLAVMSFNVGV L A+AG
Sbjct: 90  MLVEWLSHTRFIKSTTNKLVAGLLQTAMYGLRVGLAYLVMLAVMSFNVGVFLVAIAG 140

[Close]

BLAST of CmoCh01G006630.1 vs. TrEMBL
Match: V4UFV7_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10029475mg PE=4 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 2.1e-24
Identity = 63/106 (59.43%), Postives = 78/106 (73.58%), Query Frame = 1


Query: 26  HMTFFWGKSAEILFAGWPGRNSLSYAIALVFVFLVAFAVEWLSHTKLTASVADDVFAGFV 85
           HMTFFWGK++EILF+GWPG +S  YA+AL+ VF++A  VEWLSH KL    A+ V AG +
Sbjct: 34  HMTFFWGKNSEILFSGWPGTSSGMYALALIVVFVLAVLVEWLSHCKLMKPDANHVAAGLI 93

Query: 86  QTALYGVRVGLAFVVMLAVMSFNVGVLLAAVAGSPEYNFKFKIKYF 132
           QT L+ +RVGLAF+VMLA+MSFN GV L AVAG     F F  + F
Sbjct: 94  QTLLHAIRVGLAFLVMLAIMSFNGGVFLVAVAGHTFGFFIFGSRVF 139

[Close]

BLAST of CmoCh01G006630.1 vs. TrEMBL
Match: A0A0A0LVF3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G526830 PE=4 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 4.6e-24
Identity = 61/111 (54.95%), Postives = 79/111 (71.17%), Query Frame = 1


Query: 22  KMEFHMTFFWGKSAEILFAGWPGRNSLSYAIALVFVFLVAFAVEWLSHTKLTASVADDVF 81
           KM  HMTFFWG +AEILF  WPG  S  YA+AL+F+F++AF VEWL+H +L    +    
Sbjct: 32  KMMMHMTFFWGTNAEILFHRWPGERSGMYALALIFIFVLAFLVEWLTHCRLIKEDSSRAA 91

Query: 82  AGFVQTALYGVRVGLAFVVMLAVMSFNVGVLLAAVAGSPEYNFKFKIKYFE 133
           AG ++T ++ VRVGLA++VMLAVMSFNVGVLL A+ G     F F  K+F+
Sbjct: 92  AGLIRTLMHTVRVGLAYLVMLAVMSFNVGVLLVAIGGHCLGFFLFGSKFFK 142

[Close]

BLAST of CmoCh01G006630.1 vs. TAIR10
Match: AT5G59030.1 (AT5G59030.1 copper transporter 1)

HSP 1 Score: 113.2 bits (282), Expect = 1.3e-25
Identity = 59/115 (51.30%), Postives = 76/115 (66.09%), Query Frame = 1


Query: 22  KMEFHMTFFWGKSAEILFAGWPGRNSLSYAIALVFVFLVAFAVEWLSHTKLTASVADDV- 81
           KM  HMTFFWGK+ E+LF+GWPG +S  YA+ L+FVF +A   EWL+H+ L      D  
Sbjct: 39  KMMMHMTFFWGKNTEVLFSGWPGTSSGMYALCLIFVFFLAVLTEWLAHSSLLRGSTGDSA 98

Query: 82  --FAGFVQTALYGVRVGLAFVVMLAVMSFNVGVLLAAVAGSPEYNFKFKIKYFEN 134
              AG +QTA+Y +R+GLA++VMLAVMSFN GV L A+AG       F  + F N
Sbjct: 99  NRAAGLIQTAVYTLRIGLAYLVMLAVMSFNAGVFLVALAGHAVGFMLFGSQTFRN 153

[Close]

BLAST of CmoCh01G006630.1 vs. TAIR10
Match: AT3G46900.1 (AT3G46900.1 copper transporter 2)

HSP 1 Score: 104.8 bits (260), Expect = 4.6e-23
Identity = 51/97 (52.58%), Postives = 71/97 (73.20%), Query Frame = 1


Query: 23  MEFHMTFFWGKSAEILFAGWPGRNSLSYAIALVFVFLVAFAVEWLSHTK-LTASVADDVF 82
           M  HMTFFWGK+ E+LF+GWPG +S  YA+ L+ +FL+A   EWL+H+  L  S + +  
Sbjct: 28  MMMHMTFFWGKNTEVLFSGWPGTSSGMYALCLIVIFLLAVIAEWLAHSPILRVSGSTNRA 87

Query: 83  AGFVQTALYGVRVGLAFVVMLAVMSFNVGVLLAAVAG 119
           AG  QTA+Y ++ GL+++VMLAVMSFN GV + A+AG
Sbjct: 88  AGLAQTAVYTLKTGLSYLVMLAVMSFNAGVFIVAIAG 124

[Close]

BLAST of CmoCh01G006630.1 vs. TAIR10
Match: AT2G26975.1 (AT2G26975.1 Ctr copper transporter family)

HSP 1 Score: 100.5 bits (249), Expect = 8.7e-22
Identity = 51/94 (54.26%), Postives = 67/94 (71.28%), Query Frame = 1


Query: 26  HMTFFWGKSAEILFAGWPGRNSLSYAIALVFVFLVAFAVEWLSHTKLTASVADDVFA-GF 85
           HMTFFWGK+ EILF+GWPG +   Y + L+ VFL+A  VEWL+H+ +         A G 
Sbjct: 26  HMTFFWGKNTEILFSGWPGTSLGMYVLCLIVVFLLAVIVEWLAHSSILRGRGSTSRAKGL 85

Query: 86  VQTALYGVRVGLAFVVMLAVMSFNVGVLLAAVAG 119
           VQTA+Y ++ GLA++VMLAVMSFN GV + A+AG
Sbjct: 86  VQTAVYTLKTGLAYLVMLAVMSFNGGVFIVAIAG 119

[Close]

BLAST of CmoCh01G006630.1 vs. TAIR10
Match: AT2G37925.1 (AT2G37925.1 copper transporter 4)

HSP 1 Score: 87.4 bits (215), Expect = 7.6e-18
Identity = 47/111 (42.34%), Postives = 71/111 (63.96%), Query Frame = 1


Query: 26  HMTFFWGKSAEILFAGWPGRNSLSYAIALVFVFLVAFAVEWLSHTKLTASV---ADDVFA 85
           H TF+WG + ++LF+GWPG +   YA+AL+FVF +AF  EWL+     +S+   AD +  
Sbjct: 31  HPTFYWGYNCQVLFSGWPGSDRGMYALALIFVFFLAFLAEWLARCSDASSIKQGADKLAK 90

Query: 86  GFVQTALYGVRVGLAFVVMLAVMSFNVGVLLAAVAGSPEYNFKFKIKYFEN 134
              +TA+Y V+ G +++V+LAV+SFN GV LAA+ G       F+ + F N
Sbjct: 91  VAFRTAMYTVKSGFSYLVILAVVSFNGGVFLAAIFGHALGFAVFRGRAFRN 141

[Close]

BLAST of CmoCh01G006630.1 vs. TAIR10
Match: AT5G59040.1 (AT5G59040.1 copper transporter 3)

HSP 1 Score: 86.7 bits (213), Expect = 1.3e-17
Identity = 45/93 (48.39%), Postives = 61/93 (65.59%), Query Frame = 1


Query: 26  HMTFFWGKSAEILFAGWPGRNSLSYAIALVFVFLVAFAVEWLSHTKLTASVADDVFAGFV 85
           HMTFFWGK+ E+LF GWPG +   Y + L  +F+++   E LS      S    +  G +
Sbjct: 31  HMTFFWGKTTEVLFDGWPGTSLKMYWVCLAVIFVISAFSECLSRCGFMKSGPASLGGGLL 90

Query: 86  QTALYGVRVGLAFVVMLAVMSFNVGVLLAAVAG 119
           QTA+Y VR  L+++VMLAVMSFN GV +AA+AG
Sbjct: 91  QTAVYTVRAALSYLVMLAVMSFNGGVFVAAMAG 123

[Close]

BLAST of CmoCh01G006630.1 vs. NCBI nr
Match: gi|659115177|ref|XP_008457426.1| (PREDICTED: copper transporter 1-like [Cucumis melo])

HSP 1 Score: 144.8 bits (364), Expect = 1.1e-31
Identity = 71/97 (73.20%), Postives = 81/97 (83.51%), Query Frame = 1


Query: 22  KMEFHMTFFWGKSAEILFAGWPGRNSLSYAIALVFVFLVAFAVEWLSHTKLTASVADDVF 81
           KME HMTF+WGK+ EILF GWPGR+  SY +AL+FVFL+AF VEWLSHTK T  V  ++ 
Sbjct: 2   KMETHMTFYWGKTVEILFVGWPGRSFFSYTVALIFVFLLAFTVEWLSHTKFTTLVVGNLT 61

Query: 82  AGFVQTALYGVRVGLAFVVMLAVMSFNVGVLLAAVAG 119
           AG VQT LYGVRVGLAF+VMLAVMS+NVGVLLAAV G
Sbjct: 62  AGLVQTILYGVRVGLAFIVMLAVMSYNVGVLLAAVTG 98

[Close]

BLAST of CmoCh01G006630.1 vs. NCBI nr
Match: gi|700210668|gb|KGN65764.1| (hypothetical protein Csa_1G526835 [Cucumis sativus])

HSP 1 Score: 138.7 bits (348), Expect = 8.1e-30
Identity = 73/113 (64.60%), Postives = 86/113 (76.11%), Query Frame = 1


Query: 23  MEFHMTFFWGKSAEILFAGWPGRNSLSYAIALVFVFLVAFAVEWLSHTKLTASVADDVFA 82
           ME HMTF+WGK+ EILF GWPGR+  S  I L+FVFL+AF VEWLSHTK T S  D++ A
Sbjct: 1   METHMTFYWGKTIEILFPGWPGRSFFSSVIVLIFVFLLAFTVEWLSHTKFTTSAMDNLTA 60

Query: 83  GFVQTALYGVRVGLAFVVMLAVMSFNVGVLLAAVAGSPEYNFKFKIKYFENIF 136
           G VQT LYG+RVGLAF+VMLAVMS+NVG+LLAAV G   Y+  F + Y   IF
Sbjct: 61  GLVQTILYGIRVGLAFIVMLAVMSYNVGILLAAVTG---YSIGFLV-YGSKIF 109

[Close]

BLAST of CmoCh01G006630.1 vs. NCBI nr
Match: gi|698425631|ref|XP_009785614.1| (PREDICTED: copper transporter 6-like [Nicotiana sylvestris])

HSP 1 Score: 129.0 bits (323), Expect = 6.4e-27
Identity = 63/101 (62.38%), Postives = 79/101 (78.22%), Query Frame = 1


Query: 19  SQEKMEFHMTFFWGKSAEILFAGWPGRNSLS-YAIALVFVFLVAFAVEWLSHTKLTASVA 78
           S+  M  HMTFFWGK+AE+LF+GWPG N++  Y +AL FVFL+AF VEW+SHT      A
Sbjct: 23  SRHHMMMHMTFFWGKNAEVLFSGWPGYNNMGMYILALFFVFLLAFFVEWISHTNYIKESA 82

Query: 79  DDVFAGFVQTALYGVRVGLAFVVMLAVMSFNVGVLLAAVAG 119
           + V AG +QTALYGVR+GLA++VMLAVMSFN G+ L A+AG
Sbjct: 83  NHVAAGLIQTALYGVRIGLAYLVMLAVMSFNAGIFLVAIAG 123

[Close]

BLAST of CmoCh01G006630.1 vs. NCBI nr
Match: gi|697141102|ref|XP_009624660.1| (PREDICTED: copper transporter 1-like [Nicotiana tomentosiformis])

HSP 1 Score: 125.2 bits (313), Expect = 9.3e-26
Identity = 61/101 (60.40%), Postives = 77/101 (76.24%), Query Frame = 1


Query: 19  SQEKMEFHMTFFWGKSAEILFAGWPGRNSLS-YAIALVFVFLVAFAVEWLSHTKLTASVA 78
           S+  M  HMTFFWG +AE+LF+GWPG N++  Y +AL FVFL+AF  EW+SHT      A
Sbjct: 23  SRHHMMMHMTFFWGGNAEVLFSGWPGYNNMGMYVLALFFVFLLAFFAEWISHTNYIKESA 82

Query: 79  DDVFAGFVQTALYGVRVGLAFVVMLAVMSFNVGVLLAAVAG 119
           + V AG +QTALYGVR+GLA++VMLAVMSFN G+ L A+AG
Sbjct: 83  NHVAAGLIQTALYGVRIGLAYLVMLAVMSFNTGIFLVAIAG 123

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BLAST of CmoCh01G006630.1 vs. NCBI nr
Match: gi|565381366|ref|XP_006357043.1| (PREDICTED: copper transporter 6-like [Solanum tuberosum])

HSP 1 Score: 122.9 bits (307), Expect = 4.6e-25
Identity = 61/97 (62.89%), Postives = 76/97 (78.35%), Query Frame = 1


Query: 23  MEFHMTFFWGKSAEILFAGWPGRNSLS-YAIALVFVFLVAFAVEWLSHTKLTASVADDVF 82
           M  HMTFFWGK+AEILF+GWPG N++  Y  AL  VFL+AF VEWLSH+      A+ V 
Sbjct: 25  MMMHMTFFWGKNAEILFSGWPGYNNIGMYVFALFVVFLLAFFVEWLSHSNYIKESANHVT 84

Query: 83  AGFVQTALYGVRVGLAFVVMLAVMSFNVGVLLAAVAG 119
           AG +QTALYG+R+GLA++VML+VMSFN G+ LAA+AG
Sbjct: 85  AGLIQTALYGIRIGLAYLVMLSVMSFNGGIFLAAIAG 121

The following BLAST results are available for this feature:

BLAST of CmoCh01G006630.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
COPT1_ARATH	2.3e-24	51.30	Copper transporter 1 OS=Arabidopsis thaliana GN=COPT1 PE=2 SV=2	[more]
COPT2_ARATH	8.1e-22	52.58	Copper transporter 2 OS=Arabidopsis thaliana GN=COPT2 PE=2 SV=1	[more]
COPT6_ARATH	1.5e-20	54.26	Copper transporter 6 OS=Arabidopsis thaliana GN=COPT6 PE=2 SV=1	[more]
COPT3_ORYSJ	3.5e-17	50.00	Copper transporter 3 OS=Oryza sativa subsp. japonica GN=COPT3 PE=2 SV=1	[more]
COPT1_ORYSJ	6.0e-17	48.98	Copper transporter 1 OS=Oryza sativa subsp. japonica GN=COPT1 PE=2 SV=1	[more]

BLAST of CmoCh01G006630.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LXH5_CUCSA	5.7e-30	64.60	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G526835 PE=4 SV=1	[more]
M1AKG7_SOLTU	3.2e-25	62.89	Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400009540 PE=4 SV=1	[more]
E9LK44_VITVI	5.5e-25	52.99	Copper transporter OS=Vitis vinifera GN=CTr7 PE=2 SV=1	[more]
V4UFV7_9ROSI	2.1e-24	59.43	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10029475mg PE=4 SV=1	[more]
A0A0A0LVF3_CUCSA	4.6e-24	54.95	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G526830 PE=4 SV=1	[more]

BLAST of CmoCh01G006630.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G59030.1	1.3e-25	51.30	copper transporter 1	[more]
AT3G46900.1	4.6e-23	52.58	copper transporter 2	[more]
AT2G26975.1	8.7e-22	54.26	Ctr copper transporter family	[more]
AT2G37925.1	7.6e-18	42.34	copper transporter 4	[more]
AT5G59040.1	1.3e-17	48.39	copper transporter 3	[more]

BLAST of CmoCh01G006630.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659115177\|ref\|XP_008457426.1\|	1.1e-31	73.20	PREDICTED: copper transporter 1-like [Cucumis melo]	[more]
gi\|700210668\|gb\|KGN65764.1\|	8.1e-30	64.60	hypothetical protein Csa_1G526835 [Cucumis sativus]	[more]
gi\|698425631\|ref\|XP_009785614.1\|	6.4e-27	62.38	PREDICTED: copper transporter 6-like [Nicotiana sylvestris]	[more]
gi\|697141102\|ref\|XP_009624660.1\|	9.3e-26	60.40	PREDICTED: copper transporter 1-like [Nicotiana tomentosiformis]	[more]
gi\|565381366\|ref\|XP_006357043.1\|	4.6e-25	62.89	PREDICTED: copper transporter 6-like [Solanum tuberosum]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR007274	Cop_transporter

Vocabulary: **Molecular Function**
Term	Definition
GO:0005375	copper ion transmembrane transporter activity

Vocabulary: **Cellular Component**
Term	Definition
GO:0016021	integral component of membrane

Vocabulary: **Biological Process**
Term	Definition
GO:0035434	copper ion transmembrane transport

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0035434	copper ion transmembrane transport
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005375	copper ion transmembrane transporter activity

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmoCh01G006630	CmoCh01G006630	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmoCh01G006630.1	CmoCh01G006630.1-protein	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh01G006630.1.exon.1	CmoCh01G006630.1.exon.1	exon
CmoCh01G006630.1.exon.2	CmoCh01G006630.1.exon.2	exon
CmoCh01G006630.1.exon.3	CmoCh01G006630.1.exon.3	exon
CmoCh01G006630.1.exon.4	CmoCh01G006630.1.exon.4	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh01G006630.1.CDS.1	CmoCh01G006630.1.CDS.1	CDS
CmoCh01G006630.1.CDS.2	CmoCh01G006630.1.CDS.2	CDS
CmoCh01G006630.1.CDS.3	CmoCh01G006630.1.CDS.3	CDS
CmoCh01G006630.1.CDS.4	CmoCh01G006630.1.CDS.4	CDS

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007274	Ctr copper transporter	PANTHER	PTHR12483	SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS	coord: 20..118 score: 3.1
IPR007274	Ctr copper transporter	PFAM	PF04145	Ctr	coord: 27..118 score: 5.0
None	No IPR available	PANTHER	PTHR12483:SF24	COPPER TRANSPORTER 1-RELATED	coord: 20..118 score: 3.1