CmoCh01G006630 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh01G006630
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Copper transporter
Location	Cmo_Chr01 : 3384798 .. 3386965 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATATCTAGCCGATGTAGAGTTGGTATTCCCTGACTCCACAATGATATGATATAAGAAGAACATAAAATATCTTTTATGATATCTAGCCGATGTGCAGTTAGTATTCCCCGACTCTCCACAATGATATTTTTATGATATCTAGCCGATGTGCAGTTAGTATTCCCCGACTCTCCACAATGATATGATATTGTTCACTTTGAGCATAATCTCTCGTGATTATTTCTCATGGCTTTGATTTGGGCTTCCCCAAAAAGCTTCGTACCAATAGAGTTAGTATTACTCTTTTATAAACGCATGATCATTCCTTAAATTAGCTGAGATGGGACTTTCATCATCCGACACTACACAAAATCTAGAAATAGTAAATTAGAAAAATACTACATAAATTCAAATCTACTAACAATTTACTGTAATCTTTGAATATTTTAAATCATATCTCATCTACTTTGAATAATACTTTTAATATTTCAACTACTTTTAATCGTATCTTAACCGACCAGTTGAAATTATGGAGGGTTAGAAACTCAAAGTTTGTCTTTTTCTTATCATATCTCGAGGTTTGGTCCAAAGTTCATCCAAATTTTGATCTATTAAGACTATCGAGACTTGAAAATCTAAATTCTCATCTCTACAATGTTATGACTGAGTATAAGCTCTCATCCCTCTGCTCTATGCTTTCTCAAGAGGTTTTGGATTATAAATTCATGATTTTTTCCTAAATTAGCGGAGTGATTCATCCACAAATTATTATTATTATTATTATTTAATAAAAATTTAATGGAATCAAATTTGGAAATTGAATAATAAAAATAAACTTTAGTACGAGCTAACTTGTAGTACACTCGCGAGCTTAGCTGGTAGTACAATACAGCTTCATTATTTGATTGGCTTCCGAGAAAATGAAGGAAAAACAAAGATCCATTTTCCCAAGAAAAAATGGAATTCCACATGACATTTTTCTGGGGAAAGTCGGCGGAGATTCTGTTCGCCGGCTGGCCTGGCCGGAACTCACTCTCTTACGCCATCGCCTTAGTCTTCGTCTTTCTCGTAGCCTTCGCCGTGGAGTGGCTGTCGCACACTAAACTCACCGCCTCTGTCGCCGATGACGTCTTCGCCGGCTTTGTTCAGACCGCCCTGTACGGCGTCCGGGTGGGGTTGGCTTTTGTCGTCATGCTGGCCGTCATGTCATTCAATGTCGGAGTCCTGCTTGCGGCGGTGGCCGGGTATTCGGTCGGGTTCTTGGTTTATGGGAGCCGGGTTTTTAATAGATCCAAAATTGACCTAAATTTGAATATGTCTGATATACCACCGCTTAATTGTTAATAGAGTGGAAGTTTGGAATCATAATATACATATATATTTGCCTATTTGAATTTTTGTATATTAATTTCATATATTAGGGGTATCGAGATAATATATCCAACCATAAATTTCTTCCTCGGGCCGAACAGTTCTCGTGGCATTGATTAACGTTGTTACTTAAAAATAATTGTTTTGTAATTATGCTCGAGATATCCACTAAATCTCTTCATAAGTTTTATTGATGATTATGGCAGTAAGTTGTGGATATATTTCTAGCGTACTATCTTCAAGAATTATAAAAATCTTGTTCAAAAAGAAATTGAAGATTTTCTCTCGATTGAGAGGCGTGGAGAGTCACTTCTCACGAGAGCAACTTACCATATCACAAAATGGAGTAATTGAGTGTGAAGACAGAACAATCATATACATGGTTAGAAAATATCTAGCCAGAAGCTGTAAATGGGACCACCCATGTGCTCGACAGAAATACTACAGTGATAATTGATAGTATAAAATCTAATGTTGATTATTTACTTTCAAATAACAAGCGAAATAAATTAGATGATAAAATGTTTTGGTGCGTGCGGTTAGCGATGGTAAAAAGTCTAAAATATATAGACTCTATGATCTAATGTCCTAGAAGATAGTTATATATATCTATATATATATATATATATATATTAATTTTCAAAAAGTGAGACACGACAAAGAAATACTTCTCTGACACATTTTAGTTTCACATGCACTCAATAGTGAATTTCATATGAGCACGTGTTTTTAAATGTAGTTCTCCTGAGTACAATTTTAAATTCAAAATTAAATATTTCGAAAATATATTTTTTTTCAGAAATTCCACAGTCTGA

mRNA sequence

ATGATATCTAGCCGATGTAGAGTTGCCGATGTGCAGAAAAACAAAGATCCATTTTCCCAAGAAAAAATGGAATTCCACATGACATTTTTCTGGGGAAAGTCGGCGGAGATTCTGTTCGCCGGCTGGCCTGGCCGGAACTCACTCTCTTACGCCATCGCCTTAGTCTTCGTCTTTCTCGTAGCCTTCGCCGTGGAGTGGCTGTCGCACACTAAACTCACCGCCTCTGTCGCCGATGACGTCTTCGCCGGCTTTGTTCAGACCGCCCTGTACGGCGTCCGGGTGGGGTTGGCTTTTGTCGTCATGCTGGCCGTCATGTCATTCAATGTCGGAGTCCTGCTTGCGGCGGTGGCCGGTTCTCCTGAGTACAATTTTAAATTCAAAATTAAATATTTCGAAAATATATTTTTTTTCAGAAATTCCACAGTCTGA

Coding sequence (CDS)

ATGATATCTAGCCGATGTAGAGTTGCCGATGTGCAGAAAAACAAAGATCCATTTTCCCAAGAAAAAATGGAATTCCACATGACATTTTTCTGGGGAAAGTCGGCGGAGATTCTGTTCGCCGGCTGGCCTGGCCGGAACTCACTCTCTTACGCCATCGCCTTAGTCTTCGTCTTTCTCGTAGCCTTCGCCGTGGAGTGGCTGTCGCACACTAAACTCACCGCCTCTGTCGCCGATGACGTCTTCGCCGGCTTTGTTCAGACCGCCCTGTACGGCGTCCGGGTGGGGTTGGCTTTTGTCGTCATGCTGGCCGTCATGTCATTCAATGTCGGAGTCCTGCTTGCGGCGGTGGCCGGTTCTCCTGAGTACAATTTTAAATTCAAAATTAAATATTTCGAAAATATATTTTTTTTCAGAAATTCCACAGTCTGA

Homology

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BLAST of CmoCh01G006630 vs. Swiss-Prot
Match: COPT1_ARATH (Copper transporter 1 OS=Arabidopsis thaliana GN=COPT1 PE=2 SV=2)

HSP 1 Score: 113.2 bits (282), Expect = 2.3e-24
Identity = 59/115 (51.30%), Postives = 76/115 (66.09%), Query Frame = 1


Query: 22  KMEFHMTFFWGKSAEILFAGWPGRNSLSYAIALVFVFLVAFAVEWLSHTKLTASVADDV- 81
           KM  HMTFFWGK+ E+LF+GWPG +S  YA+ L+FVF +A   EWL+H+ L      D  
Sbjct: 39  KMMMHMTFFWGKNTEVLFSGWPGTSSGMYALCLIFVFFLAVLTEWLAHSSLLRGSTGDSA 98

Query: 82  --FAGFVQTALYGVRVGLAFVVMLAVMSFNVGVLLAAVAGSPEYNFKFKIKYFEN 134
              AG +QTA+Y +R+GLA++VMLAVMSFN GV L A+AG       F  + F N
Sbjct: 99  NRAAGLIQTAVYTLRIGLAYLVMLAVMSFNAGVFLVALAGHAVGFMLFGSQTFRN 153

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BLAST of CmoCh01G006630 vs. Swiss-Prot
Match: COPT2_ARATH (Copper transporter 2 OS=Arabidopsis thaliana GN=COPT2 PE=2 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 8.1e-22
Identity = 51/97 (52.58%), Postives = 71/97 (73.20%), Query Frame = 1


Query: 23  MEFHMTFFWGKSAEILFAGWPGRNSLSYAIALVFVFLVAFAVEWLSHTK-LTASVADDVF 82
           M  HMTFFWGK+ E+LF+GWPG +S  YA+ L+ +FL+A   EWL+H+  L  S + +  
Sbjct: 28  MMMHMTFFWGKNTEVLFSGWPGTSSGMYALCLIVIFLLAVIAEWLAHSPILRVSGSTNRA 87

Query: 83  AGFVQTALYGVRVGLAFVVMLAVMSFNVGVLLAAVAG 119
           AG  QTA+Y ++ GL+++VMLAVMSFN GV + A+AG
Sbjct: 88  AGLAQTAVYTLKTGLSYLVMLAVMSFNAGVFIVAIAG 124

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BLAST of CmoCh01G006630 vs. Swiss-Prot
Match: COPT6_ARATH (Copper transporter 6 OS=Arabidopsis thaliana GN=COPT6 PE=2 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 1.5e-20
Identity = 51/94 (54.26%), Postives = 67/94 (71.28%), Query Frame = 1


Query: 26  HMTFFWGKSAEILFAGWPGRNSLSYAIALVFVFLVAFAVEWLSHTKLTASVADDVFA-GF 85
           HMTFFWGK+ EILF+GWPG +   Y + L+ VFL+A  VEWL+H+ +         A G 
Sbjct: 26  HMTFFWGKNTEILFSGWPGTSLGMYVLCLIVVFLLAVIVEWLAHSSILRGRGSTSRAKGL 85

Query: 86  VQTALYGVRVGLAFVVMLAVMSFNVGVLLAAVAG 119
           VQTA+Y ++ GLA++VMLAVMSFN GV + A+AG
Sbjct: 86  VQTAVYTLKTGLAYLVMLAVMSFNGGVFIVAIAG 119

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BLAST of CmoCh01G006630 vs. Swiss-Prot
Match: COPT3_ORYSJ (Copper transporter 3 OS=Oryza sativa subsp. japonica GN=COPT3 PE=2 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 3.5e-17
Identity = 50/100 (50.00%), Postives = 68/100 (68.00%), Query Frame = 1


Query: 20  QEKMEFHMTFFWGKSAEILFAGWPGRNSLSYAIALVFVFLVAFAVEWLSHTKL-TASVAD 79
           + K   HMTF+WGK++EILF GWPG +   YA+AL  VF +A  +E+L   ++  +S   
Sbjct: 23  RRKRYMHMTFYWGKNSEILFTGWPGASGGMYALALAAVFALAVLLEFLGSPRVQESSSLG 82

Query: 80  DVFAGFVQTALYGVRVGLAFVVMLAVMSFNVGVLLAAVAG 119
                    A++ VRVGLA+++MLA+MSFNVGVLLAAVAG
Sbjct: 83  SRRRRATAAAVHAVRVGLAYLLMLALMSFNVGVLLAAVAG 122

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BLAST of CmoCh01G006630 vs. Swiss-Prot
Match: COPT1_ORYSJ (Copper transporter 1 OS=Oryza sativa subsp. japonica GN=COPT1 PE=2 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 6.0e-17
Identity = 48/98 (48.98%), Postives = 65/98 (66.33%), Query Frame = 1


Query: 26  HMTFFWGKSAEILFAGWPGRNSLSYAIALVFVFLVAFAVEWLSHTKLTASVA-----DDV 85
           HMTFFWGK++E+LF  WPG     YA+AL+FVF +A  VE+L   +  A +A        
Sbjct: 34  HMTFFWGKNSEVLFTMWPGTRGGMYALALIFVFALAVIVEFLGSRRADACLAALARRAPA 93

Query: 86  FAGFVQTALYGVRVGLAFVVMLAVMSFNVGVLLAAVAG 119
             G  + A++ VRVG+A+++MLA+MSFN GV L AVAG
Sbjct: 94  AGGLARAAVHTVRVGVAYLLMLALMSFNGGVFLVAVAG 131

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BLAST of CmoCh01G006630 vs. TrEMBL
Match: A0A0A0LXH5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G526835 PE=4 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 5.7e-30
Identity = 73/113 (64.60%), Postives = 86/113 (76.11%), Query Frame = 1


Query: 23  MEFHMTFFWGKSAEILFAGWPGRNSLSYAIALVFVFLVAFAVEWLSHTKLTASVADDVFA 82
           ME HMTF+WGK+ EILF GWPGR+  S  I L+FVFL+AF VEWLSHTK T S  D++ A
Sbjct: 1   METHMTFYWGKTIEILFPGWPGRSFFSSVIVLIFVFLLAFTVEWLSHTKFTTSAMDNLTA 60

Query: 83  GFVQTALYGVRVGLAFVVMLAVMSFNVGVLLAAVAGSPEYNFKFKIKYFENIF 136
           G VQT LYG+RVGLAF+VMLAVMS+NVG+LLAAV G   Y+  F + Y   IF
Sbjct: 61  GLVQTILYGIRVGLAFIVMLAVMSYNVGILLAAVTG---YSIGFLV-YGSKIF 109

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BLAST of CmoCh01G006630 vs. TrEMBL
Match: M1AKG7_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400009540 PE=4 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 3.2e-25
Identity = 61/97 (62.89%), Postives = 76/97 (78.35%), Query Frame = 1


Query: 23  MEFHMTFFWGKSAEILFAGWPGRNSLS-YAIALVFVFLVAFAVEWLSHTKLTASVADDVF 82
           M  HMTFFWGK+AEILF+GWPG N++  Y  AL  VFL+AF VEWLSH+      A+ V 
Sbjct: 25  MMMHMTFFWGKNAEILFSGWPGYNNIGMYVFALFVVFLLAFFVEWLSHSNYIKESANHVT 84

Query: 83  AGFVQTALYGVRVGLAFVVMLAVMSFNVGVLLAAVAG 119
           AG +QTALYG+R+GLA++VML+VMSFN G+ LAA+AG
Sbjct: 85  AGLIQTALYGIRIGLAYLVMLSVMSFNGGIFLAAIAG 121

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BLAST of CmoCh01G006630 vs. TrEMBL
Match: E9LK44_VITVI (Copper transporter OS=Vitis vinifera GN=CTr7 PE=2 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 5.5e-25
Identity = 62/117 (52.99%), Postives = 83/117 (70.94%), Query Frame = 1


Query: 2   ISSRCRVADVQKNKDPFSQEKMEFHMTFFWGKSAEILFAGWPGRNSLSYAIALVFVFLVA 61
           + +R  + D++ +K       M  HMTFFWG S EI F+GWPG++S  YA+AL  VF ++
Sbjct: 30  VMNRTAMGDMKMDKT------MMTHMTFFWGMSTEIFFSGWPGQSSGMYAVALALVFGLS 89

Query: 62  FAVEWLSHTKLTASVADDVFAGFVQTALYGVRVGLAFVVMLAVMSFNVGVLLAAVAG 119
             VEWLSHT+   S  + + AG +QTA+YG+RVGLA++VMLAVMSFNVGV L A+AG
Sbjct: 90  MLVEWLSHTRFIKSTTNKLVAGLLQTAMYGLRVGLAYLVMLAVMSFNVGVFLVAIAG 140

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BLAST of CmoCh01G006630 vs. TrEMBL
Match: V4UFV7_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10029475mg PE=4 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 2.1e-24
Identity = 63/106 (59.43%), Postives = 78/106 (73.58%), Query Frame = 1


Query: 26  HMTFFWGKSAEILFAGWPGRNSLSYAIALVFVFLVAFAVEWLSHTKLTASVADDVFAGFV 85
           HMTFFWGK++EILF+GWPG +S  YA+AL+ VF++A  VEWLSH KL    A+ V AG +
Sbjct: 34  HMTFFWGKNSEILFSGWPGTSSGMYALALIVVFVLAVLVEWLSHCKLMKPDANHVAAGLI 93

Query: 86  QTALYGVRVGLAFVVMLAVMSFNVGVLLAAVAGSPEYNFKFKIKYF 132
           QT L+ +RVGLAF+VMLA+MSFN GV L AVAG     F F  + F
Sbjct: 94  QTLLHAIRVGLAFLVMLAIMSFNGGVFLVAVAGHTFGFFIFGSRVF 139

[Close]

BLAST of CmoCh01G006630 vs. TrEMBL
Match: A0A0A0LVF3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G526830 PE=4 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 4.6e-24
Identity = 61/111 (54.95%), Postives = 79/111 (71.17%), Query Frame = 1


Query: 22  KMEFHMTFFWGKSAEILFAGWPGRNSLSYAIALVFVFLVAFAVEWLSHTKLTASVADDVF 81
           KM  HMTFFWG +AEILF  WPG  S  YA+AL+F+F++AF VEWL+H +L    +    
Sbjct: 32  KMMMHMTFFWGTNAEILFHRWPGERSGMYALALIFIFVLAFLVEWLTHCRLIKEDSSRAA 91

Query: 82  AGFVQTALYGVRVGLAFVVMLAVMSFNVGVLLAAVAGSPEYNFKFKIKYFE 133
           AG ++T ++ VRVGLA++VMLAVMSFNVGVLL A+ G     F F  K+F+
Sbjct: 92  AGLIRTLMHTVRVGLAYLVMLAVMSFNVGVLLVAIGGHCLGFFLFGSKFFK 142

[Close]

BLAST of CmoCh01G006630 vs. TAIR10
Match: AT5G59030.1 (AT5G59030.1 copper transporter 1)

HSP 1 Score: 113.2 bits (282), Expect = 1.3e-25
Identity = 59/115 (51.30%), Postives = 76/115 (66.09%), Query Frame = 1


Query: 22  KMEFHMTFFWGKSAEILFAGWPGRNSLSYAIALVFVFLVAFAVEWLSHTKLTASVADDV- 81
           KM  HMTFFWGK+ E+LF+GWPG +S  YA+ L+FVF +A   EWL+H+ L      D  
Sbjct: 39  KMMMHMTFFWGKNTEVLFSGWPGTSSGMYALCLIFVFFLAVLTEWLAHSSLLRGSTGDSA 98

Query: 82  --FAGFVQTALYGVRVGLAFVVMLAVMSFNVGVLLAAVAGSPEYNFKFKIKYFEN 134
              AG +QTA+Y +R+GLA++VMLAVMSFN GV L A+AG       F  + F N
Sbjct: 99  NRAAGLIQTAVYTLRIGLAYLVMLAVMSFNAGVFLVALAGHAVGFMLFGSQTFRN 153

[Close]

BLAST of CmoCh01G006630 vs. TAIR10
Match: AT3G46900.1 (AT3G46900.1 copper transporter 2)

HSP 1 Score: 104.8 bits (260), Expect = 4.6e-23
Identity = 51/97 (52.58%), Postives = 71/97 (73.20%), Query Frame = 1


Query: 23  MEFHMTFFWGKSAEILFAGWPGRNSLSYAIALVFVFLVAFAVEWLSHTK-LTASVADDVF 82
           M  HMTFFWGK+ E+LF+GWPG +S  YA+ L+ +FL+A   EWL+H+  L  S + +  
Sbjct: 28  MMMHMTFFWGKNTEVLFSGWPGTSSGMYALCLIVIFLLAVIAEWLAHSPILRVSGSTNRA 87

Query: 83  AGFVQTALYGVRVGLAFVVMLAVMSFNVGVLLAAVAG 119
           AG  QTA+Y ++ GL+++VMLAVMSFN GV + A+AG
Sbjct: 88  AGLAQTAVYTLKTGLSYLVMLAVMSFNAGVFIVAIAG 124

[Close]

BLAST of CmoCh01G006630 vs. TAIR10
Match: AT2G26975.1 (AT2G26975.1 Ctr copper transporter family)

HSP 1 Score: 100.5 bits (249), Expect = 8.7e-22
Identity = 51/94 (54.26%), Postives = 67/94 (71.28%), Query Frame = 1


Query: 26  HMTFFWGKSAEILFAGWPGRNSLSYAIALVFVFLVAFAVEWLSHTKLTASVADDVFA-GF 85
           HMTFFWGK+ EILF+GWPG +   Y + L+ VFL+A  VEWL+H+ +         A G 
Sbjct: 26  HMTFFWGKNTEILFSGWPGTSLGMYVLCLIVVFLLAVIVEWLAHSSILRGRGSTSRAKGL 85

Query: 86  VQTALYGVRVGLAFVVMLAVMSFNVGVLLAAVAG 119
           VQTA+Y ++ GLA++VMLAVMSFN GV + A+AG
Sbjct: 86  VQTAVYTLKTGLAYLVMLAVMSFNGGVFIVAIAG 119

[Close]

BLAST of CmoCh01G006630 vs. TAIR10
Match: AT2G37925.1 (AT2G37925.1 copper transporter 4)

HSP 1 Score: 87.4 bits (215), Expect = 7.6e-18
Identity = 47/111 (42.34%), Postives = 71/111 (63.96%), Query Frame = 1


Query: 26  HMTFFWGKSAEILFAGWPGRNSLSYAIALVFVFLVAFAVEWLSHTKLTASV---ADDVFA 85
           H TF+WG + ++LF+GWPG +   YA+AL+FVF +AF  EWL+     +S+   AD +  
Sbjct: 31  HPTFYWGYNCQVLFSGWPGSDRGMYALALIFVFFLAFLAEWLARCSDASSIKQGADKLAK 90

Query: 86  GFVQTALYGVRVGLAFVVMLAVMSFNVGVLLAAVAGSPEYNFKFKIKYFEN 134
              +TA+Y V+ G +++V+LAV+SFN GV LAA+ G       F+ + F N
Sbjct: 91  VAFRTAMYTVKSGFSYLVILAVVSFNGGVFLAAIFGHALGFAVFRGRAFRN 141

[Close]

BLAST of CmoCh01G006630 vs. TAIR10
Match: AT5G59040.1 (AT5G59040.1 copper transporter 3)

HSP 1 Score: 86.7 bits (213), Expect = 1.3e-17
Identity = 45/93 (48.39%), Postives = 61/93 (65.59%), Query Frame = 1


Query: 26  HMTFFWGKSAEILFAGWPGRNSLSYAIALVFVFLVAFAVEWLSHTKLTASVADDVFAGFV 85
           HMTFFWGK+ E+LF GWPG +   Y + L  +F+++   E LS      S    +  G +
Sbjct: 31  HMTFFWGKTTEVLFDGWPGTSLKMYWVCLAVIFVISAFSECLSRCGFMKSGPASLGGGLL 90

Query: 86  QTALYGVRVGLAFVVMLAVMSFNVGVLLAAVAG 119
           QTA+Y VR  L+++VMLAVMSFN GV +AA+AG
Sbjct: 91  QTAVYTVRAALSYLVMLAVMSFNGGVFVAAMAG 123

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BLAST of CmoCh01G006630 vs. NCBI nr
Match: gi|659115177|ref|XP_008457426.1| (PREDICTED: copper transporter 1-like [Cucumis melo])

HSP 1 Score: 144.8 bits (364), Expect = 1.1e-31
Identity = 71/97 (73.20%), Postives = 81/97 (83.51%), Query Frame = 1


Query: 22  KMEFHMTFFWGKSAEILFAGWPGRNSLSYAIALVFVFLVAFAVEWLSHTKLTASVADDVF 81
           KME HMTF+WGK+ EILF GWPGR+  SY +AL+FVFL+AF VEWLSHTK T  V  ++ 
Sbjct: 2   KMETHMTFYWGKTVEILFVGWPGRSFFSYTVALIFVFLLAFTVEWLSHTKFTTLVVGNLT 61

Query: 82  AGFVQTALYGVRVGLAFVVMLAVMSFNVGVLLAAVAG 119
           AG VQT LYGVRVGLAF+VMLAVMS+NVGVLLAAV G
Sbjct: 62  AGLVQTILYGVRVGLAFIVMLAVMSYNVGVLLAAVTG 98

[Close]

BLAST of CmoCh01G006630 vs. NCBI nr
Match: gi|700210668|gb|KGN65764.1| (hypothetical protein Csa_1G526835 [Cucumis sativus])

HSP 1 Score: 138.7 bits (348), Expect = 8.1e-30
Identity = 73/113 (64.60%), Postives = 86/113 (76.11%), Query Frame = 1


Query: 23  MEFHMTFFWGKSAEILFAGWPGRNSLSYAIALVFVFLVAFAVEWLSHTKLTASVADDVFA 82
           ME HMTF+WGK+ EILF GWPGR+  S  I L+FVFL+AF VEWLSHTK T S  D++ A
Sbjct: 1   METHMTFYWGKTIEILFPGWPGRSFFSSVIVLIFVFLLAFTVEWLSHTKFTTSAMDNLTA 60

Query: 83  GFVQTALYGVRVGLAFVVMLAVMSFNVGVLLAAVAGSPEYNFKFKIKYFENIF 136
           G VQT LYG+RVGLAF+VMLAVMS+NVG+LLAAV G   Y+  F + Y   IF
Sbjct: 61  GLVQTILYGIRVGLAFIVMLAVMSYNVGILLAAVTG---YSIGFLV-YGSKIF 109

[Close]

BLAST of CmoCh01G006630 vs. NCBI nr
Match: gi|698425631|ref|XP_009785614.1| (PREDICTED: copper transporter 6-like [Nicotiana sylvestris])

HSP 1 Score: 129.0 bits (323), Expect = 6.4e-27
Identity = 63/101 (62.38%), Postives = 79/101 (78.22%), Query Frame = 1


Query: 19  SQEKMEFHMTFFWGKSAEILFAGWPGRNSLS-YAIALVFVFLVAFAVEWLSHTKLTASVA 78
           S+  M  HMTFFWGK+AE+LF+GWPG N++  Y +AL FVFL+AF VEW+SHT      A
Sbjct: 23  SRHHMMMHMTFFWGKNAEVLFSGWPGYNNMGMYILALFFVFLLAFFVEWISHTNYIKESA 82

Query: 79  DDVFAGFVQTALYGVRVGLAFVVMLAVMSFNVGVLLAAVAG 119
           + V AG +QTALYGVR+GLA++VMLAVMSFN G+ L A+AG
Sbjct: 83  NHVAAGLIQTALYGVRIGLAYLVMLAVMSFNAGIFLVAIAG 123

[Close]

BLAST of CmoCh01G006630 vs. NCBI nr
Match: gi|697141102|ref|XP_009624660.1| (PREDICTED: copper transporter 1-like [Nicotiana tomentosiformis])

HSP 1 Score: 125.2 bits (313), Expect = 9.3e-26
Identity = 61/101 (60.40%), Postives = 77/101 (76.24%), Query Frame = 1


Query: 19  SQEKMEFHMTFFWGKSAEILFAGWPGRNSLS-YAIALVFVFLVAFAVEWLSHTKLTASVA 78
           S+  M  HMTFFWG +AE+LF+GWPG N++  Y +AL FVFL+AF  EW+SHT      A
Sbjct: 23  SRHHMMMHMTFFWGGNAEVLFSGWPGYNNMGMYVLALFFVFLLAFFAEWISHTNYIKESA 82

Query: 79  DDVFAGFVQTALYGVRVGLAFVVMLAVMSFNVGVLLAAVAG 119
           + V AG +QTALYGVR+GLA++VMLAVMSFN G+ L A+AG
Sbjct: 83  NHVAAGLIQTALYGVRIGLAYLVMLAVMSFNTGIFLVAIAG 123

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BLAST of CmoCh01G006630 vs. NCBI nr
Match: gi|565381366|ref|XP_006357043.1| (PREDICTED: copper transporter 6-like [Solanum tuberosum])

HSP 1 Score: 122.9 bits (307), Expect = 4.6e-25
Identity = 61/97 (62.89%), Postives = 76/97 (78.35%), Query Frame = 1


Query: 23  MEFHMTFFWGKSAEILFAGWPGRNSLS-YAIALVFVFLVAFAVEWLSHTKLTASVADDVF 82
           M  HMTFFWGK+AEILF+GWPG N++  Y  AL  VFL+AF VEWLSH+      A+ V 
Sbjct: 25  MMMHMTFFWGKNAEILFSGWPGYNNIGMYVFALFVVFLLAFFVEWLSHSNYIKESANHVT 84

Query: 83  AGFVQTALYGVRVGLAFVVMLAVMSFNVGVLLAAVAG 119
           AG +QTALYG+R+GLA++VML+VMSFN G+ LAA+AG
Sbjct: 85  AGLIQTALYGIRIGLAYLVMLSVMSFNGGIFLAAIAG 121

The following BLAST results are available for this feature:

BLAST of CmoCh01G006630 vs. Swiss-Prot


Match Name	E-value	Identity	Description
COPT1_ARATH	2.3e-24	51.30	Copper transporter 1 OS=Arabidopsis thaliana GN=COPT1 PE=2 SV=2	[more]
COPT2_ARATH	8.1e-22	52.58	Copper transporter 2 OS=Arabidopsis thaliana GN=COPT2 PE=2 SV=1	[more]
COPT6_ARATH	1.5e-20	54.26	Copper transporter 6 OS=Arabidopsis thaliana GN=COPT6 PE=2 SV=1	[more]
COPT3_ORYSJ	3.5e-17	50.00	Copper transporter 3 OS=Oryza sativa subsp. japonica GN=COPT3 PE=2 SV=1	[more]
COPT1_ORYSJ	6.0e-17	48.98	Copper transporter 1 OS=Oryza sativa subsp. japonica GN=COPT1 PE=2 SV=1	[more]

BLAST of CmoCh01G006630 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LXH5_CUCSA	5.7e-30	64.60	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G526835 PE=4 SV=1	[more]
M1AKG7_SOLTU	3.2e-25	62.89	Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400009540 PE=4 SV=1	[more]
E9LK44_VITVI	5.5e-25	52.99	Copper transporter OS=Vitis vinifera GN=CTr7 PE=2 SV=1	[more]
V4UFV7_9ROSI	2.1e-24	59.43	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10029475mg PE=4 SV=1	[more]
A0A0A0LVF3_CUCSA	4.6e-24	54.95	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G526830 PE=4 SV=1	[more]

BLAST of CmoCh01G006630 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G59030.1	1.3e-25	51.30	copper transporter 1	[more]
AT3G46900.1	4.6e-23	52.58	copper transporter 2	[more]
AT2G26975.1	8.7e-22	54.26	Ctr copper transporter family	[more]
AT2G37925.1	7.6e-18	42.34	copper transporter 4	[more]
AT5G59040.1	1.3e-17	48.39	copper transporter 3	[more]

BLAST of CmoCh01G006630 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659115177\|ref\|XP_008457426.1\|	1.1e-31	73.20	PREDICTED: copper transporter 1-like [Cucumis melo]	[more]
gi\|700210668\|gb\|KGN65764.1\|	8.1e-30	64.60	hypothetical protein Csa_1G526835 [Cucumis sativus]	[more]
gi\|698425631\|ref\|XP_009785614.1\|	6.4e-27	62.38	PREDICTED: copper transporter 6-like [Nicotiana sylvestris]	[more]
gi\|697141102\|ref\|XP_009624660.1\|	9.3e-26	60.40	PREDICTED: copper transporter 1-like [Nicotiana tomentosiformis]	[more]
gi\|565381366\|ref\|XP_006357043.1\|	4.6e-25	62.89	PREDICTED: copper transporter 6-like [Solanum tuberosum]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR007274	Cop_transporter

Vocabulary: **Molecular Function**
Term	Definition
GO:0005375	copper ion transmembrane transporter activity

Vocabulary: **Cellular Component**
Term	Definition
GO:0016021	integral component of membrane

Vocabulary: **Biological Process**
Term	Definition
GO:0035434	copper ion transmembrane transport

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0035434	copper ion transmembrane transport
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005375	copper ion transmembrane transporter activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh01G006630.1	CmoCh01G006630.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007274	Ctr copper transporter	PANTHER	PTHR12483	SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS	coord: 20..118 score: 3.1
IPR007274	Ctr copper transporter	PFAM	PF04145	Ctr	coord: 27..118 score: 5.0
None	No IPR available	PANTHER	PTHR12483:SF24	COPPER TRANSPORTER 1-RELATED	coord: 20..118 score: 3.1

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh01G006630	Cucumber (Chinese Long) v3	cmocucB0500
CmoCh01G006630	Cucumber (Chinese Long) v3	cmocucB0537
CmoCh01G006630	Cucumber (Chinese Long) v3	cmocucB0550
CmoCh01G006630	Cucumber (Chinese Long) v3	cmocucB0563
CmoCh01G006630	Watermelon (97103) v2	cmowmbB448
CmoCh01G006630	Watermelon (97103) v2	cmowmbB424
CmoCh01G006630	Watermelon (97103) v2	cmowmbB451
CmoCh01G006630	Watermelon (97103) v2	cmowmbB476
CmoCh01G006630	Wax gourd	cmowgoB0589
CmoCh01G006630	Wax gourd	cmowgoB0579
CmoCh01G006630	Wax gourd	cmowgoB0590
CmoCh01G006630	Cucurbita moschata (Rifu)	cmocmoB173
CmoCh01G006630	Cucurbita moschata (Rifu)	cmocmoB205
CmoCh01G006630	Cucurbita moschata (Rifu)	cmocmoB368
CmoCh01G006630	Cucurbita moschata (Rifu)	cmocmoB375
CmoCh01G006630	Cucumber (Gy14) v1	cgycmoB0403
CmoCh01G006630	Cucumber (Gy14) v1	cgycmoB0502
CmoCh01G006630	Cucurbita maxima (Rimu)	cmacmoB226
CmoCh01G006630	Cucurbita maxima (Rimu)	cmacmoB259
CmoCh01G006630	Cucurbita maxima (Rimu)	cmacmoB468
CmoCh01G006630	Cucurbita maxima (Rimu)	cmacmoB815
CmoCh01G006630	Wild cucumber (PI 183967)	cmocpiB420
CmoCh01G006630	Wild cucumber (PI 183967)	cmocpiB452
CmoCh01G006630	Cucumber (Chinese Long) v2	cmocuB416
CmoCh01G006630	Cucumber (Chinese Long) v2	cmocuB449
CmoCh01G006630	Melon (DHL92) v3.5.1	cmomeB382
CmoCh01G006630	Melon (DHL92) v3.5.1	cmomeB412
CmoCh01G006630	Watermelon (Charleston Gray)	cmowcgB382
CmoCh01G006630	Watermelon (Charleston Gray)	cmowcgB403
CmoCh01G006630	Watermelon (97103) v1	cmowmB408
CmoCh01G006630	Watermelon (97103) v1	cmowmB422
CmoCh01G006630	Cucurbita pepo (Zucchini)	cmocpeB441
CmoCh01G006630	Cucurbita pepo (Zucchini)	cmocpeB451
CmoCh01G006630	Bottle gourd (USVL1VR-Ls)	cmolsiB391
CmoCh01G006630	Bottle gourd (USVL1VR-Ls)	cmolsiB403
CmoCh01G006630	Cucumber (Gy14) v2	cgybcmoB098
CmoCh01G006630	Cucumber (Gy14) v2	cgybcmoB344
CmoCh01G006630	Cucumber (Gy14) v2	cgybcmoB480
CmoCh01G006630	Melon (DHL92) v3.6.1	cmomedB439
CmoCh01G006630	Melon (DHL92) v3.6.1	cmomedB470
CmoCh01G006630	Silver-seed gourd	carcmoB0217
CmoCh01G006630	Silver-seed gourd	carcmoB0518
CmoCh01G006630	Silver-seed gourd	carcmoB0596
CmoCh01G006630	Silver-seed gourd	carcmoB1337