CmaCh20G007790.1 (mRNA) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh20G007790.1
Type	mRNA
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	SAUR-like auxin-responsive protein family
Location	Cma_Chr20 : 3689053 .. 3689346 (-)
Sequence length	294

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAATCCGTTTGCCATCAATTCTTCTTAGTGCCAAGCAGATTCTGAAAATACAATCTCTATCTGCAAGAAATCAATCTGATGTTCCCAGAGGCCACATTGCAGTCTATGTGGGAGAGATTCAAAGGAAGAGATTTGTGGTACCTATATCATACTTGAAGCATCCTTCTTTTGTAGATCTGCTCAATAGATTAGAAGAGGAATTTGGATTTCACCATCCAATGGGCGGCTTGACGATTCCATACAGAGAAGATACTTTCATAAATCTCACTGCCAGGCTACATAGATCATGA

mRNA sequence

ATGGGAATCCGTTTGCCATCAATTCTTCTTAGTGCCAAGCAGATTCTGAAAATACAATCTCTATCTGCAAGAAATCAATCTGATGTTCCCAGAGGCCACATTGCAGTCTATGTGGGAGAGATTCAAAGGAAGAGATTTGTGGTACCTATATCATACTTGAAGCATCCTTCTTTTGTAGATCTGCTCAATAGATTAGAAGAGGAATTTGGATTTCACCATCCAATGGGCGGCTTGACGATTCCATACAGAGAAGATACTTTCATAAATCTCACTGCCAGGCTACATAGATCATGA

Coding sequence (CDS)

ATGGGAATCCGTTTGCCATCAATTCTTCTTAGTGCCAAGCAGATTCTGAAAATACAATCTCTATCTGCAAGAAATCAATCTGATGTTCCCAGAGGCCACATTGCAGTCTATGTGGGAGAGATTCAAAGGAAGAGATTTGTGGTACCTATATCATACTTGAAGCATCCTTCTTTTGTAGATCTGCTCAATAGATTAGAAGAGGAATTTGGATTTCACCATCCAATGGGCGGCTTGACGATTCCATACAGAGAAGATACTTTCATAAATCTCACTGCCAGGCTACATAGATCATGA

Protein sequence

MGIRLPSILLSAKQILKIQSLSARNQSDVPRGHIAVYVGEIQRKRFVVPISYLKHPSFVDLLNRLEEEFGFHHPMGGLTIPYREDTFINLTARLHRS

Homology

[Close]

BLAST of CmaCh20G007790.1 vs. Swiss-Prot
Match: SAU23_ARATH (Auxin-responsive protein SAUR23 OS=Arabidopsis thaliana GN=SAUR23 PE=2 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 3.0e-23
Identity = 56/87 (64.37%), Postives = 67/87 (77.01%), Query Frame = 1


Query: 9  LLSAKQILKIQSLSARNQSDVPRGHIAVYVGEIQRKRFVVPISYLKHPSFVDLLNRLEEE 68
          LL AK+IL   S SA   S  P+G +AVYVGE Q+KR++VP+SYL  PSF  LL++ EEE
Sbjct: 7  LLVAKKIL---SRSAAAVSAPPKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSEEE 66

Query: 69 FGFHHPMGGLTIPYREDTFINLTARLH 96
          FGF HPMGGLTIP  EDTFIN+T+RLH
Sbjct: 67 FGFDHPMGGLTIPCPEDTFINVTSRLH 90

[Close]

BLAST of CmaCh20G007790.1 vs. Swiss-Prot
Match: SAU20_ARATH (Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana GN=SAUR20 PE=2 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 8.6e-23
Identity = 54/88 (61.36%), Postives = 66/88 (75.00%), Query Frame = 1


Query: 9  LLSAKQILKIQSLSARNQSDVPRGHIAVYVGEIQRKRFVVPISYLKHPSFVDLLNRLEEE 68
          LL AK+IL   + +A   S  P+G +AVYVGE Q+KR++VPISYL  PSF  LL++ EEE
Sbjct: 7  LLGAKKILSRSTTAA---SAAPKGFLAVYVGESQKKRYLVPISYLNQPSFQALLSKSEEE 66

Query: 69 FGFHHPMGGLTIPYREDTFINLTARLHR 97
          FGF HPMGGLTIP  EDTFIN+T+R  R
Sbjct: 67 FGFDHPMGGLTIPCPEDTFINVTSRFQR 91

[Close]

BLAST of CmaCh20G007790.1 vs. Swiss-Prot
Match: SAU24_ARATH (Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana GN=SAUR24 PE=2 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 2.5e-22
Identity = 54/86 (62.79%), Postives = 65/86 (75.58%), Query Frame = 1


Query: 9  LLSAKQILKIQSLSARNQSDVPRGHIAVYVGEIQRKRFVVPISYLKHPSFVDLLNRLEEE 68
          LL AK+IL   S S    S  P+G +AVYVGE Q+KR++VP+SYL  PSF  LL++ EEE
Sbjct: 7  LLGAKKIL---SRSTGAGSAAPKGFLAVYVGESQKKRYLVPVSYLNQPSFQALLSKSEEE 66

Query: 69 FGFHHPMGGLTIPYREDTFINLTARL 95
          FGF HPMGGLTIP  EDTFIN+T+RL
Sbjct: 67 FGFDHPMGGLTIPCPEDTFINVTSRL 89

[Close]

BLAST of CmaCh20G007790.1 vs. Swiss-Prot
Match: SAU22_ARATH (Auxin-responsive protein SAUR22 OS=Arabidopsis thaliana GN=SAUR22 PE=2 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 3.3e-22
Identity = 53/86 (61.63%), Postives = 65/86 (75.58%), Query Frame = 1


Query: 9  LLSAKQILKIQSLSARNQSDVPRGHIAVYVGEIQRKRFVVPISYLKHPSFVDLLNRLEEE 68
          LL AK+IL   S S    S  P+G +AVYVGE Q+KR++VP+SYL  PSF  LL++ E+E
Sbjct: 7  LLGAKKIL---SRSTAAVSAAPKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSEDE 66

Query: 69 FGFHHPMGGLTIPYREDTFINLTARL 95
          FGF HPMGGLTIP  EDTFIN+T+RL
Sbjct: 67 FGFDHPMGGLTIPCHEDTFINVTSRL 89

[Close]

BLAST of CmaCh20G007790.1 vs. Swiss-Prot
Match: SAU19_ARATH (Auxin-responsive protein SAUR19 OS=Arabidopsis thaliana GN=SAUR19 PE=2 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 3.3e-22
Identity = 54/86 (62.79%), Postives = 65/86 (75.58%), Query Frame = 1


Query: 9  LLSAKQILKIQSLSARNQSDVPRGHIAVYVGEIQRKRFVVPISYLKHPSFVDLLNRLEEE 68
          LL AK+IL   S S    S  P+G +AVYVGE Q+KR++VP+SYL  PSF  LL++ EEE
Sbjct: 7  LLGAKKIL---SRSTAAGSAAPKGFLAVYVGESQKKRYLVPLSYLSQPSFQALLSKSEEE 66

Query: 69 FGFHHPMGGLTIPYREDTFINLTARL 95
          FGF HPMGGLTIP  EDTFIN+T+RL
Sbjct: 67 FGFAHPMGGLTIPCPEDTFINVTSRL 89

[Close]

BLAST of CmaCh20G007790.1 vs. TrEMBL
Match: A0A0A0LM74_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258830 PE=4 SV=1)

HSP 1 Score: 172.6 bits (436), Expect = 2.4e-40
Identity = 85/97 (87.63%), Postives = 91/97 (93.81%), Query Frame = 1


Query: 1  MGIRLPSILLSAKQILKIQSLSARNQSDVPRGHIAVYVGEIQRKRFVVPISYLKHPSFVD 60
          MGIRLPSILL+AKQILK+Q++SARNQ DVP+GHIAVYVGEIQRKRFVVPISYLK+PSFVD
Sbjct: 1  MGIRLPSILLNAKQILKMQAMSARNQFDVPKGHIAVYVGEIQRKRFVVPISYLKNPSFVD 60

Query: 61 LLNRLEEEFGFHHPMGGLTIPYREDTFINLTARLHRS 98
          LLNR EEEFGF HPMGGLTIP RED FINLTARLH S
Sbjct: 61 LLNRSEEEFGFCHPMGGLTIPCREDAFINLTARLHTS 97

[Close]

BLAST of CmaCh20G007790.1 vs. TrEMBL
Match: A0A0A0LPJ1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258820 PE=4 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 4.1e-40
Identity = 85/97 (87.63%), Postives = 91/97 (93.81%), Query Frame = 1


Query: 1  MGIRLPSILLSAKQILKIQSLSARNQSDVPRGHIAVYVGEIQRKRFVVPISYLKHPSFVD 60
          MGIRL SILL+AKQILK+Q++SARNQSDVP+GHIAVYVGEIQRKRFVVPISYLK+PSFVD
Sbjct: 1  MGIRLQSILLNAKQILKMQAMSARNQSDVPKGHIAVYVGEIQRKRFVVPISYLKNPSFVD 60

Query: 61 LLNRLEEEFGFHHPMGGLTIPYREDTFINLTARLHRS 98
          LLNR EEEFGF HPMGGLTIP RED FINLTARLH S
Sbjct: 61 LLNRSEEEFGFCHPMGGLTIPCREDAFINLTARLHTS 97

[Close]

BLAST of CmaCh20G007790.1 vs. TrEMBL
Match: A0A0A0LPG7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258620 PE=4 SV=1)

HSP 1 Score: 155.6 bits (392), Expect = 3.1e-35
Identity = 74/97 (76.29%), Postives = 86/97 (88.66%), Query Frame = 1


Query: 1  MGIRLPSILLSAKQILKIQSLSARNQSDVPRGHIAVYVGEIQRKRFVVPISYLKHPSFVD 60
          MGIRLPSILL  KQILKIQ +S + +SD+P+GHIAVYVGEIQ KRFVVPIS+L HPSF++
Sbjct: 1  MGIRLPSILLHTKQILKIQGVSTKVKSDIPKGHIAVYVGEIQTKRFVVPISFLNHPSFLN 60

Query: 61 LLNRLEEEFGFHHPMGGLTIPYREDTFINLTARLHRS 98
          LL R EEEFGF+HPMGGLTIP RE+TFI+LT+RLH S
Sbjct: 61 LLKRAEEEFGFNHPMGGLTIPCREETFIDLTSRLHTS 97

[Close]

BLAST of CmaCh20G007790.1 vs. TrEMBL
Match: A0A0A0LJ03_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258810 PE=4 SV=1)

HSP 1 Score: 154.5 bits (389), Expect = 6.8e-35
Identity = 74/90 (82.22%), Postives = 81/90 (90.00%), Query Frame = 1


Query: 8   ILLSAKQILKIQSLSARNQSDVPRGHIAVYVGEIQRKRFVVPISYLKHPSFVDLLNRLEE 67
           +L  +  +LK+Q++SARNQSDVP+GHIAVYVGEIQRKRFVVPISYLKHPSFVDLLNR EE
Sbjct: 116 VLKGSYLVLKMQAMSARNQSDVPKGHIAVYVGEIQRKRFVVPISYLKHPSFVDLLNRSEE 175

Query: 68  EFGFHHPMGGLTIPYREDTFINLTARLHRS 98
           EFGF HPMGGLTIP RED FINLTARLH S
Sbjct: 176 EFGFCHPMGGLTIPCREDAFINLTARLHTS 205

[Close]

BLAST of CmaCh20G007790.1 vs. TrEMBL
Match: A0A0A0LIZ4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258710 PE=4 SV=1)

HSP 1 Score: 153.7 bits (387), Expect = 1.2e-34
Identity = 73/97 (75.26%), Postives = 84/97 (86.60%), Query Frame = 1


Query: 1  MGIRLPSILLSAKQILKIQSLSARNQSDVPRGHIAVYVGEIQRKRFVVPISYLKHPSFVD 60
          MG RLPSIL SAKQILK QS+S R QS VP+GHIAVYVGEIQ+KRF+VPISYL HPSF+D
Sbjct: 1  MGFRLPSILFSAKQILKAQSISGRCQSSVPKGHIAVYVGEIQKKRFLVPISYLNHPSFLD 60

Query: 61 LLNRLEEEFGFHHPMGGLTIPYREDTFINLTARLHRS 98
          LL R EEEFGF+HP GGLTIP +E+ FI++T+RLH S
Sbjct: 61 LLRRAEEEFGFNHPTGGLTIPCKEEAFIDVTSRLHTS 97

[Close]

BLAST of CmaCh20G007790.1 vs. TAIR10
Match: AT4G38840.1 (AT4G38840.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 115.9 bits (289), Expect = 1.4e-26
Identity = 57/99 (57.58%), Postives = 73/99 (73.74%), Query Frame = 1


Query: 1  MGIRLPSILLSAKQILK----IQSLSARNQSDVPRGHIAVYVGEIQRKRFVVPISYLKHP 60
          M IR+P +L S+KQIL+    + S S+ +  DVP+G++AVYVGE   KRFVVP+SYL  P
Sbjct: 1  MAIRIPRVLQSSKQILRQAKLLSSSSSSSSLDVPKGYLAVYVGEQNMKRFVVPVSYLDQP 60

Query: 61 SFVDLLNRLEEEFGFHHPMGGLTIPYREDTFINLTARLH 96
          SF DLL + EEEFGF HPMGGLTIP  E+ FI+L +R +
Sbjct: 61 SFQDLLRKAEEEFGFDHPMGGLTIPCSEEIFIDLASRFN 99

[Close]

BLAST of CmaCh20G007790.1 vs. TAIR10
Match: AT4G34810.1 (AT4G34810.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 112.8 bits (281), Expect = 1.2e-25
Identity = 57/101 (56.44%), Postives = 76/101 (75.25%), Query Frame = 1


Query: 1   MGIRLPSILLSAKQILKIQSLSARNQSD------VPRGHIAVYVGE---IQRKRFVVPIS 60
           MG+   +I  + KQILK+ SL+ RN++       VP+GH+AVYVGE   +++KRFVVPIS
Sbjct: 1   MGLSRFAISNATKQILKLNSLANRNRTSSSSSDHVPKGHVAVYVGEQIEMEKKRFVVPIS 60

Query: 61  YLKHPSFVDLLNRLEEEFGFHHPMGGLTIPYREDTFINLTA 93
           +L HPSF + L+R EEEFGF+HPMGGLTIP RE+ F++L A
Sbjct: 61  FLNHPSFKEFLSRAEEEFGFNHPMGGLTIPCREEVFLDLIA 101

[Close]

BLAST of CmaCh20G007790.1 vs. TAIR10
Match: AT2G21210.1 (AT2G21210.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 111.7 bits (278), Expect = 2.6e-25
Identity = 56/98 (57.14%), Postives = 73/98 (74.49%), Query Frame = 1


Query: 1  MGIRLPSILLSAKQILKIQSLSARNQSDVPRGHIAVYVGEI-QRKRFVVPISYLKHPSFV 60
          M IR+  +L S+KQ+LK  S S+ N + +P+GH+AVYVGE+ Q++RFVVP++YL HP F 
Sbjct: 1  MAIRISRVLQSSKQLLKSLSHSSNNVA-IPKGHLAVYVGEMMQKRRFVVPVTYLSHPCFQ 60

Query: 61 DLLNRLEEEFGFHHPMGGLTIPYREDTFINLTARLHRS 98
           LL + EEEFGF HPMGGLTIP  E  FI+L +RL  S
Sbjct: 61 KLLRKAEEEFGFDHPMGGLTIPCTEQIFIDLASRLSTS 97

[Close]

BLAST of CmaCh20G007790.1 vs. TAIR10
Match: AT5G18060.1 (AT5G18060.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 109.0 bits (271), Expect = 1.7e-24
Identity = 56/87 (64.37%), Postives = 67/87 (77.01%), Query Frame = 1


Query: 9  LLSAKQILKIQSLSARNQSDVPRGHIAVYVGEIQRKRFVVPISYLKHPSFVDLLNRLEEE 68
          LL AK+IL   S SA   S  P+G +AVYVGE Q+KR++VP+SYL  PSF  LL++ EEE
Sbjct: 7  LLVAKKIL---SRSAAAVSAPPKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSEEE 66

Query: 69 FGFHHPMGGLTIPYREDTFINLTARLH 96
          FGF HPMGGLTIP  EDTFIN+T+RLH
Sbjct: 67 FGFDHPMGGLTIPCPEDTFINVTSRLH 90

[Close]

BLAST of CmaCh20G007790.1 vs. TAIR10
Match: AT5G18020.1 (AT5G18020.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 107.5 bits (267), Expect = 4.8e-24
Identity = 54/88 (61.36%), Postives = 66/88 (75.00%), Query Frame = 1


Query: 9  LLSAKQILKIQSLSARNQSDVPRGHIAVYVGEIQRKRFVVPISYLKHPSFVDLLNRLEEE 68
          LL AK+IL   + +A   S  P+G +AVYVGE Q+KR++VPISYL  PSF  LL++ EEE
Sbjct: 7  LLGAKKILSRSTTAA---SAAPKGFLAVYVGESQKKRYLVPISYLNQPSFQALLSKSEEE 66

Query: 69 FGFHHPMGGLTIPYREDTFINLTARLHR 97
          FGF HPMGGLTIP  EDTFIN+T+R  R
Sbjct: 67 FGFDHPMGGLTIPCPEDTFINVTSRFQR 91

[Close]

BLAST of CmaCh20G007790.1 vs. NCBI nr
Match: gi|778669614|ref|XP_011649278.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis sativus])

HSP 1 Score: 177.2 bits (448), Expect = 1.4e-41
Identity = 86/97 (88.66%), Postives = 92/97 (94.85%), Query Frame = 1


Query: 1  MGIRLPSILLSAKQILKIQSLSARNQSDVPRGHIAVYVGEIQRKRFVVPISYLKHPSFVD 60
          MGIRLPSILL+AKQ+LK+Q++SARNQSDVP+GHIAVYVGEIQRKRFVVPISYLKHPSFVD
Sbjct: 1  MGIRLPSILLNAKQVLKMQAMSARNQSDVPKGHIAVYVGEIQRKRFVVPISYLKHPSFVD 60

Query: 61 LLNRLEEEFGFHHPMGGLTIPYREDTFINLTARLHRS 98
          LLNR EEEFGF HPMGGLTIP RED FINLTARLH S
Sbjct: 61 LLNRSEEEFGFCHPMGGLTIPCREDAFINLTARLHTS 97

[Close]

BLAST of CmaCh20G007790.1 vs. NCBI nr
Match: gi|778669611|ref|XP_011649277.1| (PREDICTED: auxin-induced protein X15-like [Cucumis sativus])

HSP 1 Score: 172.6 bits (436), Expect = 3.5e-40
Identity = 85/97 (87.63%), Postives = 91/97 (93.81%), Query Frame = 1


Query: 1  MGIRLPSILLSAKQILKIQSLSARNQSDVPRGHIAVYVGEIQRKRFVVPISYLKHPSFVD 60
          MGIRLPSILL+AKQILK+Q++SARNQ DVP+GHIAVYVGEIQRKRFVVPISYLK+PSFVD
Sbjct: 1  MGIRLPSILLNAKQILKMQAMSARNQFDVPKGHIAVYVGEIQRKRFVVPISYLKNPSFVD 60

Query: 61 LLNRLEEEFGFHHPMGGLTIPYREDTFINLTARLHRS 98
          LLNR EEEFGF HPMGGLTIP RED FINLTARLH S
Sbjct: 61 LLNRSEEEFGFCHPMGGLTIPCREDAFINLTARLHTS 97

[Close]

BLAST of CmaCh20G007790.1 vs. NCBI nr
Match: gi|659115604|ref|XP_008457639.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis melo])

HSP 1 Score: 172.6 bits (436), Expect = 3.5e-40
Identity = 84/97 (86.60%), Postives = 91/97 (93.81%), Query Frame = 1


Query: 1  MGIRLPSILLSAKQILKIQSLSARNQSDVPRGHIAVYVGEIQRKRFVVPISYLKHPSFVD 60
          MGIRLPSILL+AKQ+LK+Q++SARNQSDVP+G+IAVYVGEIQRKRFVVPISYLKHPSFVD
Sbjct: 1  MGIRLPSILLNAKQVLKMQAMSARNQSDVPKGYIAVYVGEIQRKRFVVPISYLKHPSFVD 60

Query: 61 LLNRLEEEFGFHHPMGGLTIPYREDTFINLTARLHRS 98
          LL R EEEFGF HPMGGLTIP RED FINLTARLH S
Sbjct: 61 LLKRSEEEFGFCHPMGGLTIPCREDAFINLTARLHTS 97

[Close]

BLAST of CmaCh20G007790.1 vs. NCBI nr
Match: gi|700206767|gb|KGN61886.1| (hypothetical protein Csa_2G258820 [Cucumis sativus])

HSP 1 Score: 171.8 bits (434), Expect = 5.9e-40
Identity = 85/97 (87.63%), Postives = 91/97 (93.81%), Query Frame = 1


Query: 1  MGIRLPSILLSAKQILKIQSLSARNQSDVPRGHIAVYVGEIQRKRFVVPISYLKHPSFVD 60
          MGIRL SILL+AKQILK+Q++SARNQSDVP+GHIAVYVGEIQRKRFVVPISYLK+PSFVD
Sbjct: 1  MGIRLQSILLNAKQILKMQAMSARNQSDVPKGHIAVYVGEIQRKRFVVPISYLKNPSFVD 60

Query: 61 LLNRLEEEFGFHHPMGGLTIPYREDTFINLTARLHRS 98
          LLNR EEEFGF HPMGGLTIP RED FINLTARLH S
Sbjct: 61 LLNRSEEEFGFCHPMGGLTIPCREDAFINLTARLHTS 97

[Close]

BLAST of CmaCh20G007790.1 vs. NCBI nr
Match: gi|449458542|ref|XP_004147006.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis sativus])

HSP 1 Score: 155.6 bits (392), Expect = 4.4e-35
Identity = 74/97 (76.29%), Postives = 86/97 (88.66%), Query Frame = 1


Query: 1  MGIRLPSILLSAKQILKIQSLSARNQSDVPRGHIAVYVGEIQRKRFVVPISYLKHPSFVD 60
          MGIRLPSILL  KQILKIQ +S + +SD+P+GHIAVYVGEIQ KRFVVPIS+L HPSF++
Sbjct: 1  MGIRLPSILLHTKQILKIQGVSTKVKSDIPKGHIAVYVGEIQTKRFVVPISFLNHPSFLN 60

Query: 61 LLNRLEEEFGFHHPMGGLTIPYREDTFINLTARLHRS 98
          LL R EEEFGF+HPMGGLTIP RE+TFI+LT+RLH S
Sbjct: 61 LLKRAEEEFGFNHPMGGLTIPCREETFIDLTSRLHTS 97

The following BLAST results are available for this feature:

BLAST of CmaCh20G007790.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
SAU23_ARATH	3.0e-23	64.37	Auxin-responsive protein SAUR23 OS=Arabidopsis thaliana GN=SAUR23 PE=2 SV=1	[more]
SAU20_ARATH	8.6e-23	61.36	Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana GN=SAUR20 PE=2 SV=1	[more]
SAU24_ARATH	2.5e-22	62.79	Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana GN=SAUR24 PE=2 SV=1	[more]
SAU22_ARATH	3.3e-22	61.63	Auxin-responsive protein SAUR22 OS=Arabidopsis thaliana GN=SAUR22 PE=2 SV=1	[more]
SAU19_ARATH	3.3e-22	62.79	Auxin-responsive protein SAUR19 OS=Arabidopsis thaliana GN=SAUR19 PE=2 SV=1	[more]

BLAST of CmaCh20G007790.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LM74_CUCSA	2.4e-40	87.63	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258830 PE=4 SV=1	[more]
A0A0A0LPJ1_CUCSA	4.1e-40	87.63	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258820 PE=4 SV=1	[more]
A0A0A0LPG7_CUCSA	3.1e-35	76.29	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258620 PE=4 SV=1	[more]
A0A0A0LJ03_CUCSA	6.8e-35	82.22	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258810 PE=4 SV=1	[more]
A0A0A0LIZ4_CUCSA	1.2e-34	75.26	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258710 PE=4 SV=1	[more]

BLAST of CmaCh20G007790.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G38840.1	1.4e-26	57.58	SAUR-like auxin-responsive protein family	[more]
AT4G34810.1	1.2e-25	56.44	SAUR-like auxin-responsive protein family	[more]
AT2G21210.1	2.6e-25	57.14	SAUR-like auxin-responsive protein family	[more]
AT5G18060.1	1.7e-24	64.37	SAUR-like auxin-responsive protein family	[more]
AT5G18020.1	4.8e-24	61.36	SAUR-like auxin-responsive protein family	[more]

BLAST of CmaCh20G007790.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778669614\|ref\|XP_011649278.1\|	1.4e-41	88.66	PREDICTED: auxin-induced protein 15A-like [Cucumis sativus]	[more]
gi\|778669611\|ref\|XP_011649277.1\|	3.5e-40	87.63	PREDICTED: auxin-induced protein X15-like [Cucumis sativus]	[more]
gi\|659115604\|ref\|XP_008457639.1\|	3.5e-40	86.60	PREDICTED: auxin-induced protein 15A-like [Cucumis melo]	[more]
gi\|700206767\|gb\|KGN61886.1\|	5.9e-40	87.63	hypothetical protein Csa_2G258820 [Cucumis sativus]	[more]
gi\|449458542\|ref\|XP_004147006.1\|	4.4e-35	76.29	PREDICTED: auxin-induced protein 15A-like [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR003676	SAUR_fam

Vocabulary: **Biological Process**
Term	Definition
GO:0009733	response to auxin

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009733	response to auxin
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmaCh20G007790	CmaCh20G007790	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmaCh20G007790.1	CmaCh20G007790.1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh20G007790.1.CDS.1	CmaCh20G007790.1.CDS.1	CDS

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh20G007790.1.exon.1	CmaCh20G007790.1.exon.1	exon

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003676	Small auxin-up RNA	PFAM	PF02519	Auxin_inducible	coord: 13..93 score: 6.9
None	No IPR available	PANTHER	PTHR31929	FAMILY NOT NAMED	coord: 2..97 score: 4.3
None	No IPR available	PANTHER	PTHR31929:SF3	SUBFAMILY NOT NAMED	coord: 2..97 score: 4.3