CmaCh20G007790 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh20G007790
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	SAUR-like auxin-responsive protein family
Location	Cma_Chr20 : 3689053 .. 3689346 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAATCCGTTTGCCATCAATTCTTCTTAGTGCCAAGCAGATTCTGAAAATACAATCTCTATCTGCAAGAAATCAATCTGATGTTCCCAGAGGCCACATTGCAGTCTATGTGGGAGAGATTCAAAGGAAGAGATTTGTGGTACCTATATCATACTTGAAGCATCCTTCTTTTGTAGATCTGCTCAATAGATTAGAAGAGGAATTTGGATTTCACCATCCAATGGGCGGCTTGACGATTCCATACAGAGAAGATACTTTCATAAATCTCACTGCCAGGCTACATAGATCATGA

mRNA sequence

ATGGGAATCCGTTTGCCATCAATTCTTCTTAGTGCCAAGCAGATTCTGAAAATACAATCTCTATCTGCAAGAAATCAATCTGATGTTCCCAGAGGCCACATTGCAGTCTATGTGGGAGAGATTCAAAGGAAGAGATTTGTGGTACCTATATCATACTTGAAGCATCCTTCTTTTGTAGATCTGCTCAATAGATTAGAAGAGGAATTTGGATTTCACCATCCAATGGGCGGCTTGACGATTCCATACAGAGAAGATACTTTCATAAATCTCACTGCCAGGCTACATAGATCATGA

Coding sequence (CDS)

ATGGGAATCCGTTTGCCATCAATTCTTCTTAGTGCCAAGCAGATTCTGAAAATACAATCTCTATCTGCAAGAAATCAATCTGATGTTCCCAGAGGCCACATTGCAGTCTATGTGGGAGAGATTCAAAGGAAGAGATTTGTGGTACCTATATCATACTTGAAGCATCCTTCTTTTGTAGATCTGCTCAATAGATTAGAAGAGGAATTTGGATTTCACCATCCAATGGGCGGCTTGACGATTCCATACAGAGAAGATACTTTCATAAATCTCACTGCCAGGCTACATAGATCATGA

Protein sequence

MGIRLPSILLSAKQILKIQSLSARNQSDVPRGHIAVYVGEIQRKRFVVPISYLKHPSFVDLLNRLEEEFGFHHPMGGLTIPYREDTFINLTARLHRS

Homology

[Close]

BLAST of CmaCh20G007790 vs. Swiss-Prot
Match: SAU23_ARATH (Auxin-responsive protein SAUR23 OS=Arabidopsis thaliana GN=SAUR23 PE=2 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 3.0e-23
Identity = 56/87 (64.37%), Postives = 67/87 (77.01%), Query Frame = 1


Query: 9  LLSAKQILKIQSLSARNQSDVPRGHIAVYVGEIQRKRFVVPISYLKHPSFVDLLNRLEEE 68
          LL AK+IL   S SA   S  P+G +AVYVGE Q+KR++VP+SYL  PSF  LL++ EEE
Sbjct: 7  LLVAKKIL---SRSAAAVSAPPKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSEEE 66

Query: 69 FGFHHPMGGLTIPYREDTFINLTARLH 96
          FGF HPMGGLTIP  EDTFIN+T+RLH
Sbjct: 67 FGFDHPMGGLTIPCPEDTFINVTSRLH 90

[Close]

BLAST of CmaCh20G007790 vs. Swiss-Prot
Match: SAU20_ARATH (Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana GN=SAUR20 PE=2 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 8.6e-23
Identity = 54/88 (61.36%), Postives = 66/88 (75.00%), Query Frame = 1


Query: 9  LLSAKQILKIQSLSARNQSDVPRGHIAVYVGEIQRKRFVVPISYLKHPSFVDLLNRLEEE 68
          LL AK+IL   + +A   S  P+G +AVYVGE Q+KR++VPISYL  PSF  LL++ EEE
Sbjct: 7  LLGAKKILSRSTTAA---SAAPKGFLAVYVGESQKKRYLVPISYLNQPSFQALLSKSEEE 66

Query: 69 FGFHHPMGGLTIPYREDTFINLTARLHR 97
          FGF HPMGGLTIP  EDTFIN+T+R  R
Sbjct: 67 FGFDHPMGGLTIPCPEDTFINVTSRFQR 91

[Close]

BLAST of CmaCh20G007790 vs. Swiss-Prot
Match: SAU24_ARATH (Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana GN=SAUR24 PE=2 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 2.5e-22
Identity = 54/86 (62.79%), Postives = 65/86 (75.58%), Query Frame = 1


Query: 9  LLSAKQILKIQSLSARNQSDVPRGHIAVYVGEIQRKRFVVPISYLKHPSFVDLLNRLEEE 68
          LL AK+IL   S S    S  P+G +AVYVGE Q+KR++VP+SYL  PSF  LL++ EEE
Sbjct: 7  LLGAKKIL---SRSTGAGSAAPKGFLAVYVGESQKKRYLVPVSYLNQPSFQALLSKSEEE 66

Query: 69 FGFHHPMGGLTIPYREDTFINLTARL 95
          FGF HPMGGLTIP  EDTFIN+T+RL
Sbjct: 67 FGFDHPMGGLTIPCPEDTFINVTSRL 89

[Close]

BLAST of CmaCh20G007790 vs. Swiss-Prot
Match: SAU22_ARATH (Auxin-responsive protein SAUR22 OS=Arabidopsis thaliana GN=SAUR22 PE=2 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 3.3e-22
Identity = 53/86 (61.63%), Postives = 65/86 (75.58%), Query Frame = 1


Query: 9  LLSAKQILKIQSLSARNQSDVPRGHIAVYVGEIQRKRFVVPISYLKHPSFVDLLNRLEEE 68
          LL AK+IL   S S    S  P+G +AVYVGE Q+KR++VP+SYL  PSF  LL++ E+E
Sbjct: 7  LLGAKKIL---SRSTAAVSAAPKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSEDE 66

Query: 69 FGFHHPMGGLTIPYREDTFINLTARL 95
          FGF HPMGGLTIP  EDTFIN+T+RL
Sbjct: 67 FGFDHPMGGLTIPCHEDTFINVTSRL 89

[Close]

BLAST of CmaCh20G007790 vs. Swiss-Prot
Match: SAU19_ARATH (Auxin-responsive protein SAUR19 OS=Arabidopsis thaliana GN=SAUR19 PE=2 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 3.3e-22
Identity = 54/86 (62.79%), Postives = 65/86 (75.58%), Query Frame = 1


Query: 9  LLSAKQILKIQSLSARNQSDVPRGHIAVYVGEIQRKRFVVPISYLKHPSFVDLLNRLEEE 68
          LL AK+IL   S S    S  P+G +AVYVGE Q+KR++VP+SYL  PSF  LL++ EEE
Sbjct: 7  LLGAKKIL---SRSTAAGSAAPKGFLAVYVGESQKKRYLVPLSYLSQPSFQALLSKSEEE 66

Query: 69 FGFHHPMGGLTIPYREDTFINLTARL 95
          FGF HPMGGLTIP  EDTFIN+T+RL
Sbjct: 67 FGFAHPMGGLTIPCPEDTFINVTSRL 89

[Close]

BLAST of CmaCh20G007790 vs. TrEMBL
Match: A0A0A0LM74_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258830 PE=4 SV=1)

HSP 1 Score: 172.6 bits (436), Expect = 2.4e-40
Identity = 85/97 (87.63%), Postives = 91/97 (93.81%), Query Frame = 1


Query: 1  MGIRLPSILLSAKQILKIQSLSARNQSDVPRGHIAVYVGEIQRKRFVVPISYLKHPSFVD 60
          MGIRLPSILL+AKQILK+Q++SARNQ DVP+GHIAVYVGEIQRKRFVVPISYLK+PSFVD
Sbjct: 1  MGIRLPSILLNAKQILKMQAMSARNQFDVPKGHIAVYVGEIQRKRFVVPISYLKNPSFVD 60

Query: 61 LLNRLEEEFGFHHPMGGLTIPYREDTFINLTARLHRS 98
          LLNR EEEFGF HPMGGLTIP RED FINLTARLH S
Sbjct: 61 LLNRSEEEFGFCHPMGGLTIPCREDAFINLTARLHTS 97

[Close]

BLAST of CmaCh20G007790 vs. TrEMBL
Match: A0A0A0LPJ1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258820 PE=4 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 4.1e-40
Identity = 85/97 (87.63%), Postives = 91/97 (93.81%), Query Frame = 1


Query: 1  MGIRLPSILLSAKQILKIQSLSARNQSDVPRGHIAVYVGEIQRKRFVVPISYLKHPSFVD 60
          MGIRL SILL+AKQILK+Q++SARNQSDVP+GHIAVYVGEIQRKRFVVPISYLK+PSFVD
Sbjct: 1  MGIRLQSILLNAKQILKMQAMSARNQSDVPKGHIAVYVGEIQRKRFVVPISYLKNPSFVD 60

Query: 61 LLNRLEEEFGFHHPMGGLTIPYREDTFINLTARLHRS 98
          LLNR EEEFGF HPMGGLTIP RED FINLTARLH S
Sbjct: 61 LLNRSEEEFGFCHPMGGLTIPCREDAFINLTARLHTS 97

[Close]

BLAST of CmaCh20G007790 vs. TrEMBL
Match: A0A0A0LPG7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258620 PE=4 SV=1)

HSP 1 Score: 155.6 bits (392), Expect = 3.1e-35
Identity = 74/97 (76.29%), Postives = 86/97 (88.66%), Query Frame = 1


Query: 1  MGIRLPSILLSAKQILKIQSLSARNQSDVPRGHIAVYVGEIQRKRFVVPISYLKHPSFVD 60
          MGIRLPSILL  KQILKIQ +S + +SD+P+GHIAVYVGEIQ KRFVVPIS+L HPSF++
Sbjct: 1  MGIRLPSILLHTKQILKIQGVSTKVKSDIPKGHIAVYVGEIQTKRFVVPISFLNHPSFLN 60

Query: 61 LLNRLEEEFGFHHPMGGLTIPYREDTFINLTARLHRS 98
          LL R EEEFGF+HPMGGLTIP RE+TFI+LT+RLH S
Sbjct: 61 LLKRAEEEFGFNHPMGGLTIPCREETFIDLTSRLHTS 97

[Close]

BLAST of CmaCh20G007790 vs. TrEMBL
Match: A0A0A0LJ03_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258810 PE=4 SV=1)

HSP 1 Score: 154.5 bits (389), Expect = 6.8e-35
Identity = 74/90 (82.22%), Postives = 81/90 (90.00%), Query Frame = 1


Query: 8   ILLSAKQILKIQSLSARNQSDVPRGHIAVYVGEIQRKRFVVPISYLKHPSFVDLLNRLEE 67
           +L  +  +LK+Q++SARNQSDVP+GHIAVYVGEIQRKRFVVPISYLKHPSFVDLLNR EE
Sbjct: 116 VLKGSYLVLKMQAMSARNQSDVPKGHIAVYVGEIQRKRFVVPISYLKHPSFVDLLNRSEE 175

Query: 68  EFGFHHPMGGLTIPYREDTFINLTARLHRS 98
           EFGF HPMGGLTIP RED FINLTARLH S
Sbjct: 176 EFGFCHPMGGLTIPCREDAFINLTARLHTS 205

[Close]

BLAST of CmaCh20G007790 vs. TrEMBL
Match: A0A0A0LIZ4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258710 PE=4 SV=1)

HSP 1 Score: 153.7 bits (387), Expect = 1.2e-34
Identity = 73/97 (75.26%), Postives = 84/97 (86.60%), Query Frame = 1


Query: 1  MGIRLPSILLSAKQILKIQSLSARNQSDVPRGHIAVYVGEIQRKRFVVPISYLKHPSFVD 60
          MG RLPSIL SAKQILK QS+S R QS VP+GHIAVYVGEIQ+KRF+VPISYL HPSF+D
Sbjct: 1  MGFRLPSILFSAKQILKAQSISGRCQSSVPKGHIAVYVGEIQKKRFLVPISYLNHPSFLD 60

Query: 61 LLNRLEEEFGFHHPMGGLTIPYREDTFINLTARLHRS 98
          LL R EEEFGF+HP GGLTIP +E+ FI++T+RLH S
Sbjct: 61 LLRRAEEEFGFNHPTGGLTIPCKEEAFIDVTSRLHTS 97

[Close]

BLAST of CmaCh20G007790 vs. TAIR10
Match: AT4G38840.1 (AT4G38840.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 115.9 bits (289), Expect = 1.4e-26
Identity = 57/99 (57.58%), Postives = 73/99 (73.74%), Query Frame = 1


Query: 1  MGIRLPSILLSAKQILK----IQSLSARNQSDVPRGHIAVYVGEIQRKRFVVPISYLKHP 60
          M IR+P +L S+KQIL+    + S S+ +  DVP+G++AVYVGE   KRFVVP+SYL  P
Sbjct: 1  MAIRIPRVLQSSKQILRQAKLLSSSSSSSSLDVPKGYLAVYVGEQNMKRFVVPVSYLDQP 60

Query: 61 SFVDLLNRLEEEFGFHHPMGGLTIPYREDTFINLTARLH 96
          SF DLL + EEEFGF HPMGGLTIP  E+ FI+L +R +
Sbjct: 61 SFQDLLRKAEEEFGFDHPMGGLTIPCSEEIFIDLASRFN 99

[Close]

BLAST of CmaCh20G007790 vs. TAIR10
Match: AT4G34810.1 (AT4G34810.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 112.8 bits (281), Expect = 1.2e-25
Identity = 57/101 (56.44%), Postives = 76/101 (75.25%), Query Frame = 1


Query: 1   MGIRLPSILLSAKQILKIQSLSARNQSD------VPRGHIAVYVGE---IQRKRFVVPIS 60
           MG+   +I  + KQILK+ SL+ RN++       VP+GH+AVYVGE   +++KRFVVPIS
Sbjct: 1   MGLSRFAISNATKQILKLNSLANRNRTSSSSSDHVPKGHVAVYVGEQIEMEKKRFVVPIS 60

Query: 61  YLKHPSFVDLLNRLEEEFGFHHPMGGLTIPYREDTFINLTA 93
           +L HPSF + L+R EEEFGF+HPMGGLTIP RE+ F++L A
Sbjct: 61  FLNHPSFKEFLSRAEEEFGFNHPMGGLTIPCREEVFLDLIA 101

[Close]

BLAST of CmaCh20G007790 vs. TAIR10
Match: AT2G21210.1 (AT2G21210.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 111.7 bits (278), Expect = 2.6e-25
Identity = 56/98 (57.14%), Postives = 73/98 (74.49%), Query Frame = 1


Query: 1  MGIRLPSILLSAKQILKIQSLSARNQSDVPRGHIAVYVGEI-QRKRFVVPISYLKHPSFV 60
          M IR+  +L S+KQ+LK  S S+ N + +P+GH+AVYVGE+ Q++RFVVP++YL HP F 
Sbjct: 1  MAIRISRVLQSSKQLLKSLSHSSNNVA-IPKGHLAVYVGEMMQKRRFVVPVTYLSHPCFQ 60

Query: 61 DLLNRLEEEFGFHHPMGGLTIPYREDTFINLTARLHRS 98
           LL + EEEFGF HPMGGLTIP  E  FI+L +RL  S
Sbjct: 61 KLLRKAEEEFGFDHPMGGLTIPCTEQIFIDLASRLSTS 97

[Close]

BLAST of CmaCh20G007790 vs. TAIR10
Match: AT5G18060.1 (AT5G18060.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 109.0 bits (271), Expect = 1.7e-24
Identity = 56/87 (64.37%), Postives = 67/87 (77.01%), Query Frame = 1


Query: 9  LLSAKQILKIQSLSARNQSDVPRGHIAVYVGEIQRKRFVVPISYLKHPSFVDLLNRLEEE 68
          LL AK+IL   S SA   S  P+G +AVYVGE Q+KR++VP+SYL  PSF  LL++ EEE
Sbjct: 7  LLVAKKIL---SRSAAAVSAPPKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSEEE 66

Query: 69 FGFHHPMGGLTIPYREDTFINLTARLH 96
          FGF HPMGGLTIP  EDTFIN+T+RLH
Sbjct: 67 FGFDHPMGGLTIPCPEDTFINVTSRLH 90

[Close]

BLAST of CmaCh20G007790 vs. TAIR10
Match: AT5G18020.1 (AT5G18020.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 107.5 bits (267), Expect = 4.8e-24
Identity = 54/88 (61.36%), Postives = 66/88 (75.00%), Query Frame = 1


Query: 9  LLSAKQILKIQSLSARNQSDVPRGHIAVYVGEIQRKRFVVPISYLKHPSFVDLLNRLEEE 68
          LL AK+IL   + +A   S  P+G +AVYVGE Q+KR++VPISYL  PSF  LL++ EEE
Sbjct: 7  LLGAKKILSRSTTAA---SAAPKGFLAVYVGESQKKRYLVPISYLNQPSFQALLSKSEEE 66

Query: 69 FGFHHPMGGLTIPYREDTFINLTARLHR 97
          FGF HPMGGLTIP  EDTFIN+T+R  R
Sbjct: 67 FGFDHPMGGLTIPCPEDTFINVTSRFQR 91

[Close]

BLAST of CmaCh20G007790 vs. NCBI nr
Match: gi|778669614|ref|XP_011649278.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis sativus])

HSP 1 Score: 177.2 bits (448), Expect = 1.4e-41
Identity = 86/97 (88.66%), Postives = 92/97 (94.85%), Query Frame = 1


Query: 1  MGIRLPSILLSAKQILKIQSLSARNQSDVPRGHIAVYVGEIQRKRFVVPISYLKHPSFVD 60
          MGIRLPSILL+AKQ+LK+Q++SARNQSDVP+GHIAVYVGEIQRKRFVVPISYLKHPSFVD
Sbjct: 1  MGIRLPSILLNAKQVLKMQAMSARNQSDVPKGHIAVYVGEIQRKRFVVPISYLKHPSFVD 60

Query: 61 LLNRLEEEFGFHHPMGGLTIPYREDTFINLTARLHRS 98
          LLNR EEEFGF HPMGGLTIP RED FINLTARLH S
Sbjct: 61 LLNRSEEEFGFCHPMGGLTIPCREDAFINLTARLHTS 97

[Close]

BLAST of CmaCh20G007790 vs. NCBI nr
Match: gi|778669611|ref|XP_011649277.1| (PREDICTED: auxin-induced protein X15-like [Cucumis sativus])

HSP 1 Score: 172.6 bits (436), Expect = 3.5e-40
Identity = 85/97 (87.63%), Postives = 91/97 (93.81%), Query Frame = 1


Query: 1  MGIRLPSILLSAKQILKIQSLSARNQSDVPRGHIAVYVGEIQRKRFVVPISYLKHPSFVD 60
          MGIRLPSILL+AKQILK+Q++SARNQ DVP+GHIAVYVGEIQRKRFVVPISYLK+PSFVD
Sbjct: 1  MGIRLPSILLNAKQILKMQAMSARNQFDVPKGHIAVYVGEIQRKRFVVPISYLKNPSFVD 60

Query: 61 LLNRLEEEFGFHHPMGGLTIPYREDTFINLTARLHRS 98
          LLNR EEEFGF HPMGGLTIP RED FINLTARLH S
Sbjct: 61 LLNRSEEEFGFCHPMGGLTIPCREDAFINLTARLHTS 97

[Close]

BLAST of CmaCh20G007790 vs. NCBI nr
Match: gi|659115604|ref|XP_008457639.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis melo])

HSP 1 Score: 172.6 bits (436), Expect = 3.5e-40
Identity = 84/97 (86.60%), Postives = 91/97 (93.81%), Query Frame = 1


Query: 1  MGIRLPSILLSAKQILKIQSLSARNQSDVPRGHIAVYVGEIQRKRFVVPISYLKHPSFVD 60
          MGIRLPSILL+AKQ+LK+Q++SARNQSDVP+G+IAVYVGEIQRKRFVVPISYLKHPSFVD
Sbjct: 1  MGIRLPSILLNAKQVLKMQAMSARNQSDVPKGYIAVYVGEIQRKRFVVPISYLKHPSFVD 60

Query: 61 LLNRLEEEFGFHHPMGGLTIPYREDTFINLTARLHRS 98
          LL R EEEFGF HPMGGLTIP RED FINLTARLH S
Sbjct: 61 LLKRSEEEFGFCHPMGGLTIPCREDAFINLTARLHTS 97

[Close]

BLAST of CmaCh20G007790 vs. NCBI nr
Match: gi|700206767|gb|KGN61886.1| (hypothetical protein Csa_2G258820 [Cucumis sativus])

HSP 1 Score: 171.8 bits (434), Expect = 5.9e-40
Identity = 85/97 (87.63%), Postives = 91/97 (93.81%), Query Frame = 1


Query: 1  MGIRLPSILLSAKQILKIQSLSARNQSDVPRGHIAVYVGEIQRKRFVVPISYLKHPSFVD 60
          MGIRL SILL+AKQILK+Q++SARNQSDVP+GHIAVYVGEIQRKRFVVPISYLK+PSFVD
Sbjct: 1  MGIRLQSILLNAKQILKMQAMSARNQSDVPKGHIAVYVGEIQRKRFVVPISYLKNPSFVD 60

Query: 61 LLNRLEEEFGFHHPMGGLTIPYREDTFINLTARLHRS 98
          LLNR EEEFGF HPMGGLTIP RED FINLTARLH S
Sbjct: 61 LLNRSEEEFGFCHPMGGLTIPCREDAFINLTARLHTS 97

[Close]

BLAST of CmaCh20G007790 vs. NCBI nr
Match: gi|449458542|ref|XP_004147006.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis sativus])

HSP 1 Score: 155.6 bits (392), Expect = 4.4e-35
Identity = 74/97 (76.29%), Postives = 86/97 (88.66%), Query Frame = 1


Query: 1  MGIRLPSILLSAKQILKIQSLSARNQSDVPRGHIAVYVGEIQRKRFVVPISYLKHPSFVD 60
          MGIRLPSILL  KQILKIQ +S + +SD+P+GHIAVYVGEIQ KRFVVPIS+L HPSF++
Sbjct: 1  MGIRLPSILLHTKQILKIQGVSTKVKSDIPKGHIAVYVGEIQTKRFVVPISFLNHPSFLN 60

Query: 61 LLNRLEEEFGFHHPMGGLTIPYREDTFINLTARLHRS 98
          LL R EEEFGF+HPMGGLTIP RE+TFI+LT+RLH S
Sbjct: 61 LLKRAEEEFGFNHPMGGLTIPCREETFIDLTSRLHTS 97

The following BLAST results are available for this feature:

BLAST of CmaCh20G007790 vs. Swiss-Prot


Match Name	E-value	Identity	Description
SAU23_ARATH	3.0e-23	64.37	Auxin-responsive protein SAUR23 OS=Arabidopsis thaliana GN=SAUR23 PE=2 SV=1	[more]
SAU20_ARATH	8.6e-23	61.36	Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana GN=SAUR20 PE=2 SV=1	[more]
SAU24_ARATH	2.5e-22	62.79	Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana GN=SAUR24 PE=2 SV=1	[more]
SAU22_ARATH	3.3e-22	61.63	Auxin-responsive protein SAUR22 OS=Arabidopsis thaliana GN=SAUR22 PE=2 SV=1	[more]
SAU19_ARATH	3.3e-22	62.79	Auxin-responsive protein SAUR19 OS=Arabidopsis thaliana GN=SAUR19 PE=2 SV=1	[more]

BLAST of CmaCh20G007790 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LM74_CUCSA	2.4e-40	87.63	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258830 PE=4 SV=1	[more]
A0A0A0LPJ1_CUCSA	4.1e-40	87.63	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258820 PE=4 SV=1	[more]
A0A0A0LPG7_CUCSA	3.1e-35	76.29	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258620 PE=4 SV=1	[more]
A0A0A0LJ03_CUCSA	6.8e-35	82.22	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258810 PE=4 SV=1	[more]
A0A0A0LIZ4_CUCSA	1.2e-34	75.26	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258710 PE=4 SV=1	[more]

BLAST of CmaCh20G007790 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G38840.1	1.4e-26	57.58	SAUR-like auxin-responsive protein family	[more]
AT4G34810.1	1.2e-25	56.44	SAUR-like auxin-responsive protein family	[more]
AT2G21210.1	2.6e-25	57.14	SAUR-like auxin-responsive protein family	[more]
AT5G18060.1	1.7e-24	64.37	SAUR-like auxin-responsive protein family	[more]
AT5G18020.1	4.8e-24	61.36	SAUR-like auxin-responsive protein family	[more]

BLAST of CmaCh20G007790 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778669614\|ref\|XP_011649278.1\|	1.4e-41	88.66	PREDICTED: auxin-induced protein 15A-like [Cucumis sativus]	[more]
gi\|778669611\|ref\|XP_011649277.1\|	3.5e-40	87.63	PREDICTED: auxin-induced protein X15-like [Cucumis sativus]	[more]
gi\|659115604\|ref\|XP_008457639.1\|	3.5e-40	86.60	PREDICTED: auxin-induced protein 15A-like [Cucumis melo]	[more]
gi\|700206767\|gb\|KGN61886.1\|	5.9e-40	87.63	hypothetical protein Csa_2G258820 [Cucumis sativus]	[more]
gi\|449458542\|ref\|XP_004147006.1\|	4.4e-35	76.29	PREDICTED: auxin-induced protein 15A-like [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR003676	SAUR_fam

Vocabulary: **Biological Process**
Term	Definition
GO:0009733	response to auxin

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009733	response to auxin
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh20G007790.1	CmaCh20G007790.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003676	Small auxin-up RNA	PFAM	PF02519	Auxin_inducible	coord: 13..93 score: 6.9
None	No IPR available	PANTHER	PTHR31929	FAMILY NOT NAMED	coord: 2..97 score: 4.3
None	No IPR available	PANTHER	PTHR31929:SF3	SUBFAMILY NOT NAMED	coord: 2..97 score: 4.3

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh20G007790	Csa2G258810	Cucumber (Chinese Long) v2	cmacuB542
CmaCh20G007790	CSPI02G13030	Wild cucumber (PI 183967)	cmacpiB547
CmaCh20G007790	Cp4.1LG10g00170	Cucurbita pepo (Zucchini)	cmacpeB557
CmaCh20G007790	CsaV3_2G015590	Cucumber (Chinese Long) v3	cmacucB0651

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh20G007790	Cucurbita maxima (Rimu)	cmacmaB155
CmaCh20G007790	Cucurbita maxima (Rimu)	cmacmaB469
CmaCh20G007790	Cucurbita maxima (Rimu)	cmacmaB444
CmaCh20G007790	Cucumber (Gy14) v1	cgycmaB0479
CmaCh20G007790	Cucumber (Gy14) v1	cgycmaB1052
CmaCh20G007790	Cucurbita moschata (Rifu)	cmacmoB542
CmaCh20G007790	Cucurbita moschata (Rifu)	cmacmoB548
CmaCh20G007790	Cucurbita moschata (Rifu)	cmacmoB551
CmaCh20G007790	Cucurbita moschata (Rifu)	cmacmoB554
CmaCh20G007790	Wild cucumber (PI 183967)	cmacpiB580
CmaCh20G007790	Cucumber (Chinese Long) v2	cmacuB541
CmaCh20G007790	Cucumber (Chinese Long) v2	cmacuB573
CmaCh20G007790	Melon (DHL92) v3.5.1	cmameB490
CmaCh20G007790	Melon (DHL92) v3.5.1	cmameB510
CmaCh20G007790	Watermelon (Charleston Gray)	cmawcgB477
CmaCh20G007790	Watermelon (97103) v1	cmawmB526
CmaCh20G007790	Watermelon (97103) v1	cmawmB544
CmaCh20G007790	Cucurbita pepo (Zucchini)	cmacpeB565
CmaCh20G007790	Cucurbita pepo (Zucchini)	cmacpeB570
CmaCh20G007790	Cucurbita pepo (Zucchini)	cmacpeB585
CmaCh20G007790	Bottle gourd (USVL1VR-Ls)	cmalsiB507
CmaCh20G007790	Bottle gourd (USVL1VR-Ls)	cmalsiB514
CmaCh20G007790	Cucumber (Gy14) v2	cgybcmaB218
CmaCh20G007790	Cucumber (Gy14) v2	cgybcmaB956
CmaCh20G007790	Melon (DHL92) v3.6.1	cmamedB570
CmaCh20G007790	Melon (DHL92) v3.6.1	cmamedB587
CmaCh20G007790	Silver-seed gourd	carcmaB0188
CmaCh20G007790	Silver-seed gourd	carcmaB0441
CmaCh20G007790	Cucumber (Chinese Long) v3	cmacucB0687
CmaCh20G007790	Watermelon (97103) v2	cmawmbB567
CmaCh20G007790	Watermelon (97103) v2	cmawmbB570
CmaCh20G007790	Wax gourd	cmawgoB0677
CmaCh20G007790	Wax gourd	cmawgoB0684