CmaCh20G003180.1 (mRNA) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGTAACAGTTTAAGGTGTTGTTTGGCTTGTGTTCTTCCTTGTGGAGCTCTTGATTTGATACGAATCGTTCATTTGAACGGCCACGTCGAAGAAATTGCCCATCCCATCACCGCCGGCGAGGTCCTAAAAGCGAACCCAAATCATGTTCTTACTAAGCCTTCTTCACAAGGGGTTGTTCGTCGGATTCTGATTCTCTCGCCGGAATCTGAGCTCAAAAGGGGCACTATTTATTTCGTGATTCCGGTGACTTCTCTACCGGAGAAGAAAAGAAACGCCGGAAGCAGCCTCAAAACTCCGTCTTCAGAGGTCAAAACTGTACCGCCACCGCAGACAGTGATTCTTACCTCTCCGATGTTGTATCCGACAAGAAACCGTCGCGGCGGGACCGCCGCGGTGCCCGGGTGGTCGTATGGCGGCCCCGTTTAG ATGGGTAACAGTTTAAGGTGTTGTTTGGCTTGTGTTCTTCCTTGTGGAGCTCTTGATTTGATACGAATCGTTCATTTGAACGGCCACGTCGAAGAAATTGCCCATCCCATCACCGCCGGCGAGGTCCTAAAAGCGAACCCAAATCATGTTCTTACTAAGCCTTCTTCACAAGGGGTTGTTCGTCGGATTCTGATTCTCTCGCCGGAATCTGAGCTCAAAAGGGGCACTATTTATTTCGTGATTCCGGTGACTTCTCTACCGGAGAAGAAAAGAAACGCCGGAAGCAGCCTCAAAACTCCGTCTTCAGAGGTCAAAACTGTACCGCCACCGCAGACAGTGATTCTTACCTCTCCGATGTTGTATCCGACAAGAAACCGTCGCGGCGGGACCGCCGCGGTGCCCGGGTGGTCGTATGGCGGCCCCGTTTAG ATGGGTAACAGTTTAAGGTGTTGTTTGGCTTGTGTTCTTCCTTGTGGAGCTCTTGATTTGATACGAATCGTTCATTTGAACGGCCACGTCGAAGAAATTGCCCATCCCATCACCGCCGGCGAGGTCCTAAAAGCGAACCCAAATCATGTTCTTACTAAGCCTTCTTCACAAGGGGTTGTTCGTCGGATTCTGATTCTCTCGCCGGAATCTGAGCTCAAAAGGGGCACTATTTATTTCGTGATTCCGGTGACTTCTCTACCGGAGAAGAAAAGAAACGCCGGAAGCAGCCTCAAAACTCCGTCTTCAGAGGTCAAAACTGTACCGCCACCGCAGACAGTGATTCTTACCTCTCCGATGTTGTATCCGACAAGAAACCGTCGCGGCGGGACCGCCGCGGTGCCCGGGTGGTCGTATGGCGGCCCCGTTTAG MGNSLRCCLACVLPCGALDLIRIVHLNGHVEEIAHPITAGEVLKANPNHVLTKPSSQGVVRRILILSPESELKRGTIYFVIPVTSLPEKKRNAGSSLKTPSSEVKTVPPPQTVILTSPMLYPTRNRRGGTAAVPGWSYGGPV
BLAST of CmaCh20G003180.1 vs. TrEMBL
Match: A0A0A0KBY5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G217470 PE=4 SV=1) HSP 1 Score: 194.5 bits (493), Expect = 8.7e-47 Identity = 104/142 (73.24%), Postives = 114/142 (80.28%), Query Frame = 1
BLAST of CmaCh20G003180.1 vs. TrEMBL
Match: A0A166CAG3_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_012266 PE=4 SV=1) HSP 1 Score: 172.9 bits (437), Expect = 2.7e-40 Identity = 92/134 (68.66%), Postives = 104/134 (77.61%), Query Frame = 1
BLAST of CmaCh20G003180.1 vs. TrEMBL
Match: I1LLT3_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_11G163800 PE=4 SV=1) HSP 1 Score: 172.2 bits (435), Expect = 4.6e-40 Identity = 84/94 (89.36%), Postives = 90/94 (95.74%), Query Frame = 1
BLAST of CmaCh20G003180.1 vs. TrEMBL
Match: A0A0B2QN20_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_026754 PE=4 SV=1) HSP 1 Score: 172.2 bits (435), Expect = 4.6e-40 Identity = 84/94 (89.36%), Postives = 90/94 (95.74%), Query Frame = 1
BLAST of CmaCh20G003180.1 vs. TrEMBL
Match: A0A0B2NYG3_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_028318 PE=4 SV=1) HSP 1 Score: 171.8 bits (434), Expect = 6.0e-40 Identity = 83/94 (88.30%), Postives = 90/94 (95.74%), Query Frame = 1
BLAST of CmaCh20G003180.1 vs. TAIR10
Match: AT2G30230.1 (AT2G30230.1 unknown protein) HSP 1 Score: 164.1 bits (414), Expect = 6.4e-41 Identity = 77/91 (84.62%), Postives = 87/91 (95.60%), Query Frame = 1
BLAST of CmaCh20G003180.1 vs. TAIR10
Match: AT1G06980.1 (AT1G06980.1 unknown protein) HSP 1 Score: 161.8 bits (408), Expect = 3.2e-40 Identity = 78/91 (85.71%), Postives = 86/91 (94.51%), Query Frame = 1
BLAST of CmaCh20G003180.1 vs. TAIR10
Match: AT1G29195.1 (AT1G29195.1 unknown protein) HSP 1 Score: 109.0 bits (271), Expect = 2.4e-24 Identity = 57/116 (49.14%), Postives = 77/116 (66.38%), Query Frame = 1
BLAST of CmaCh20G003180.1 vs. NCBI nr
Match: gi|659127666|ref|XP_008463824.1| (PREDICTED: uncharacterized protein LOC103501874 [Cucumis melo]) HSP 1 Score: 195.3 bits (495), Expect = 7.3e-47 Identity = 95/105 (90.48%), Postives = 102/105 (97.14%), Query Frame = 1
BLAST of CmaCh20G003180.1 vs. NCBI nr
Match: gi|449463312|ref|XP_004149378.1| (PREDICTED: uncharacterized protein LOC101207122 [Cucumis sativus]) HSP 1 Score: 194.5 bits (493), Expect = 1.2e-46 Identity = 104/142 (73.24%), Postives = 114/142 (80.28%), Query Frame = 1
BLAST of CmaCh20G003180.1 vs. NCBI nr
Match: gi|657951821|ref|XP_008354594.1| (PREDICTED: uncharacterized protein LOC103418232 [Malus domestica]) HSP 1 Score: 174.5 bits (441), Expect = 1.3e-40 Identity = 90/139 (64.75%), Postives = 109/139 (78.42%), Query Frame = 1
BLAST of CmaCh20G003180.1 vs. NCBI nr
Match: gi|720003485|ref|XP_010257008.1| (PREDICTED: uncharacterized protein LOC104597250 [Nelumbo nucifera]) HSP 1 Score: 174.1 bits (440), Expect = 1.7e-40 Identity = 95/149 (63.76%), Postives = 108/149 (72.48%), Query Frame = 1
BLAST of CmaCh20G003180.1 vs. NCBI nr
Match: gi|1021045729|gb|KZN03510.1| (hypothetical protein DCAR_012266 [Daucus carota subsp. sativus]) HSP 1 Score: 172.9 bits (437), Expect = 3.9e-40 Identity = 92/134 (68.66%), Postives = 104/134 (77.61%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
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