CmaCh18G002530.1 (mRNA) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh18G002530.1
Type	mRNA
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Senescence regulator
Location	Cma_Chr18 : 1348448 .. 1348999 (+)
Sequence length	552

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGAAAGGCCGGAAGTTAGGTATAAACAGGAGCGAGCGGTTTCTCGGGAGCTATGGAAATGGATACGGTCAAGGCTCCAATAAAGGAGATGAATCATCGGAGTTTCGTGAAGAAGATGTGTGGGCGATGATTGACAACAGCAATTCAACCAACGGTGAGGATGAGAGCATGACAGTAAGAAATCGCCGGAGATCAACGCCGCTTGATGAACCAAACGTCGGCGGAGTTTCGATTGCTTTTCAAGACTCCAACAGGACGGCACGTGGACGGCACATAGCGGCATCGGCTCCGATGAACGTGCCGGACTGGAGCAAGATTCTGAGGGCGGAATCGGTGGAGTCACTACCGGAGACGGACGGAGGAGGTTACTACAACAACGATGAGGCGGATATGGTGCCGCCGCACGAGTATTTGGCGAGGGAATACGCGAGGAGCCGGAATACTGCGGCGGCGACGTCAGTTTTGGAGGGCGTGGGGAGGACTCTGAAAGGGAGAGATATGAGAAGGGTTCGGGATGCGGTTTGGAGTCAGACCGGGTTCGATGGTTAA

mRNA sequence

ATGGCGAAAGGCCGGAAGTTAGGTATAAACAGGAGCGAGCGGTTTCTCGGGAGCTATGGAAATGGATACGGTCAAGGCTCCAATAAAGGAGATGAATCATCGGAGTTTCGTGAAGAAGATGTGTGGGCGATGATTGACAACAGCAATTCAACCAACGGTGAGGATGAGAGCATGACAGTAAGAAATCGCCGGAGATCAACGCCGCTTGATGAACCAAACGTCGGCGGAGTTTCGATTGCTTTTCAAGACTCCAACAGGACGGCACGTGGACGGCACATAGCGGCATCGGCTCCGATGAACGTGCCGGACTGGAGCAAGATTCTGAGGGCGGAATCGGTGGAGTCACTACCGGAGACGGACGGAGGAGGTTACTACAACAACGATGAGGCGGATATGGTGCCGCCGCACGAGTATTTGGCGAGGGAATACGCGAGGAGCCGGAATACTGCGGCGGCGACGTCAGTTTTGGAGGGCGTGGGGAGGACTCTGAAAGGGAGAGATATGAGAAGGGTTCGGGATGCGGTTTGGAGTCAGACCGGGTTCGATGGTTAA

Coding sequence (CDS)

ATGGCGAAAGGCCGGAAGTTAGGTATAAACAGGAGCGAGCGGTTTCTCGGGAGCTATGGAAATGGATACGGTCAAGGCTCCAATAAAGGAGATGAATCATCGGAGTTTCGTGAAGAAGATGTGTGGGCGATGATTGACAACAGCAATTCAACCAACGGTGAGGATGAGAGCATGACAGTAAGAAATCGCCGGAGATCAACGCCGCTTGATGAACCAAACGTCGGCGGAGTTTCGATTGCTTTTCAAGACTCCAACAGGACGGCACGTGGACGGCACATAGCGGCATCGGCTCCGATGAACGTGCCGGACTGGAGCAAGATTCTGAGGGCGGAATCGGTGGAGTCACTACCGGAGACGGACGGAGGAGGTTACTACAACAACGATGAGGCGGATATGGTGCCGCCGCACGAGTATTTGGCGAGGGAATACGCGAGGAGCCGGAATACTGCGGCGGCGACGTCAGTTTTGGAGGGCGTGGGGAGGACTCTGAAAGGGAGAGATATGAGAAGGGTTCGGGATGCGGTTTGGAGTCAGACCGGGTTCGATGGTTAA

Protein sequence

MAKGRKLGINRSERFLGSYGNGYGQGSNKGDESSEFREEDVWAMIDNSNSTNGEDESMTVRNRRRSTPLDEPNVGGVSIAFQDSNRTARGRHIAASAPMNVPDWSKILRAESVESLPETDGGGYYNNDEADMVPPHEYLAREYARSRNTAAATSVLEGVGRTLKGRDMRRVRDAVWSQTGFDG

Homology

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BLAST of CmaCh18G002530.1 vs. TrEMBL
Match: A0A0A0LU86_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G063480 PE=4 SV=1)

HSP 1 Score: 278.5 bits (711), Expect = 5.9e-72
Identity = 149/196 (76.02%), Postives = 163/196 (83.16%), Query Frame = 1


Query: 1   MAKGRKLGINRSERFLGSYGNGYGQGSNKGDESSEFREEDVWAMIDNSNSTNGEDES--- 60
           MAKGRKLGINR+ERFLGSY NG+ Q S  GD+SSE REEDVW++IDN NS + EDE+   
Sbjct: 1   MAKGRKLGINRNERFLGSYSNGHAQASYNGDDSSELREEDVWSIIDNKNSADAEDENYGN 60

Query: 61  MTVRNRRRSTPLDEPNVGGVSIAFQDS-NRTA---------RGRHIAASAPMNVPDWSKI 120
           +T+R RRRSTP DE NVGGVSIAFQDS +RTA         RGRH++ASAP+NVPDWSKI
Sbjct: 61  ITLRTRRRSTPRDERNVGGVSIAFQDSGSRTAAATSQGNNPRGRHVSASAPVNVPDWSKI 120

Query: 121 LRAESVESLPETDGGGYYNNDEADMVPPHEYLAREYARSRNTAAATSVLEGVGRTLKGRD 180
           L AES  SL E D GGYYNNDE +MVPPHEYLAREYARSRNTAAATSV EGVGRTLKGRD
Sbjct: 121 LWAES--SLREMDDGGYYNNDETEMVPPHEYLAREYARSRNTAAATSVFEGVGRTLKGRD 180

Query: 181 MRRVRDAVWSQTGFDG 184
           MRRVRDAVWSQTGFDG
Sbjct: 181 MRRVRDAVWSQTGFDG 194

[Close]

BLAST of CmaCh18G002530.1 vs. TrEMBL
Match: F6H7M5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_10s0116g01810 PE=4 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 5.6e-46
Identity = 112/201 (55.72%), Postives = 133/201 (66.17%), Query Frame = 1


Query: 1   MAKGRKLGINRSERFLGSYGNGYGQGSNKGDESSEFREEDVWAMIDNSNSTNGEDESMTV 60
           MAKGRKL  +RSER LGS+  G+GQG+  G +SSE  EEDVW+M+D+    +        
Sbjct: 1   MAKGRKLTTSRSERLLGSFAYGHGQGA--GADSSELGEEDVWSMVDDMVERDDHPAMRNH 60

Query: 61  RNRRRSTPLDEPNVGGVSIAFQDSNRTA------------------RGRHIAASAPMNVP 120
            +RRR    D   VGG+S+AF DS +T                   RG H+A SAP+NVP
Sbjct: 61  HHRRRIPRDDRHQVGGLSLAFDDSGKTTSSRIVHQYRPQDGVTPSPRGHHMATSAPVNVP 120

Query: 121 DWSKILRAESVESLPETDGGGYYNNDEADMVPPHEYLAREYARSRNTAAATSVLEGVGRT 180
           DW KILR +SVESL ++D     ++ E +MVPPHEYLAREYA SR  AA TSVLEGVGRT
Sbjct: 121 DWHKILRVDSVESLHDSD-----DDRELEMVPPHEYLAREYAASRKMAA-TSVLEGVGRT 180

Query: 181 LKGRDMRRVRDAVWSQTGFDG 184
           LKGRDM RVRDAVWSQTGFDG
Sbjct: 181 LKGRDMSRVRDAVWSQTGFDG 193

[Close]

BLAST of CmaCh18G002530.1 vs. TrEMBL
Match: U7DZT9_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0021s00760g PE=4 SV=1)

HSP 1 Score: 188.0 bits (476), Expect = 1.0e-44
Identity = 117/215 (54.42%), Postives = 142/215 (66.05%), Query Frame = 1


Query: 1   MAKGRKLGINRSERFLGS---YGNGYGQGSNKGDESSEFREEDVWAMIDNS--------N 60
           MAKGR+L  +RSER LGS   YGNG     N   E SE  EEDVW+M+D++        +
Sbjct: 1   MAKGRRLTTSRSERLLGSNYSYGNGQVPMVN---EVSELGEEDVWSMVDDTADRSDSAVS 60

Query: 61  STNGEDESMTVRNRRRSTPLDEPNVGGVSIAFQDS----NRTA--------RG------- 120
           ++NG          RR  P D+ N+GG+S+AF+DS    N+TA        RG       
Sbjct: 61  NSNGAWNPRAELESRRRIPRDDRNMGGLSLAFEDSSSGGNKTASSRIVHQFRGNDLVASA 120

Query: 121 --RHIAASAPMNVPDWSKILRAESVESLPETDGGGYYNNDEADMVPPHEYLAREYARSRN 180
             RH+A SAP+NVPDWSKI R  SVESL ++D G  +++ E++MVPPHEYLAREYARSR 
Sbjct: 121 SPRHMATSAPVNVPDWSKIYRVNSVESLHDSDDG--FDDQESEMVPPHEYLAREYARSRK 180

Query: 181 TAAATSVLEGVGRTLKGRDMRRVRDAVWSQTGFDG 184
           T  A SV+EGVGRTLKGRDMRRVRDAVWSQTGFDG
Sbjct: 181 TGGA-SVVEGVGRTLKGRDMRRVRDAVWSQTGFDG 209

[Close]

BLAST of CmaCh18G002530.1 vs. TrEMBL
Match: A0A067JAH7_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21223 PE=4 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 1.4e-44
Identity = 113/221 (51.13%), Postives = 143/221 (64.71%), Query Frame = 1


Query: 1   MAKGRKLGINRSERFLGSYGNGYGQGSNKGD-ESSEFREEDVWAMIDNSNSTNGEDE--- 60
           MAKGR+L  +RSER LGS+   Y  G ++ D +SSE  EEDVW+M+D++   N ++    
Sbjct: 1   MAKGRRLTTSRSERLLGSFA--YANGQDRTDTDSSELGEEDVWSMVDDAGDRNEQNVDNS 60

Query: 61  --------------SMTVRNRRRSTPLDEPNVGGVSIAFQDSNR---------------- 120
                         SMT R+RRR  P D  +VGG+S+AF+DS+                 
Sbjct: 61  QGDWNTRADVESNGSMTTRSRRR-VPRDNRHVGGLSLAFEDSSAKTASSRILHQFRGHDS 120

Query: 121 ----TARGRHIAASAPMNVPDWSKILRAESVESLPETDGGGYYNNDEADMVPPHEYLARE 180
                A  RH+A SAP+NVPDWSKILR +SVESL E+D G  +++ +++MVPPHEYLARE
Sbjct: 121 VASPAASPRHMATSAPVNVPDWSKILRVDSVESLHESDDG--FDDRDSEMVPPHEYLARE 180

Query: 181 YARSRNTAAATSVLEGVGRTLKGRDMRRVRDAVWSQTGFDG 184
           YARS+    A SV EGVGRTLKGRD+RRVRDAVWSQTGFDG
Sbjct: 181 YARSKKMGGA-SVFEGVGRTLKGRDLRRVRDAVWSQTGFDG 215

[Close]

BLAST of CmaCh18G002530.1 vs. TrEMBL
Match: A0A061GHT2_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_030219 PE=4 SV=1)

HSP 1 Score: 186.0 bits (471), Expect = 4.0e-44
Identity = 111/221 (50.23%), Postives = 138/221 (62.44%), Query Frame = 1


Query: 1   MAKGRKLGINRSERFLGSYGNGYGQGSNKGDESSEFREEDVWAMIDN------SNSTNGE 60
           MAKGR+L  +RSERFLGSY  G+  G    DE  E  EEDVW+M+DN       N  N +
Sbjct: 1   MAKGRRLTTSRSERFLGSYSYGHSLGDAVTDEP-ELGEEDVWSMVDNVAERDDQNVNNSQ 60

Query: 61  DE-------------SMTVRNRRRSTPLDEPNVGGVSIAFQDSNRTA------------- 120
            E             ++ VR  RR  P  + +VGG+S+AF+DS+ T              
Sbjct: 61  SEWSPRAEAENNGNGNVDVRGGRRRVPRGDRHVGGLSLAFEDSSSTKPRIVHQFRGHDGM 120

Query: 121 ------RGRHIAASAPMNVPDWSKILRAESVESLPETDGGGYYNNDEADMVPPHEYLARE 180
                 RG H+A SAP+NVPDWSKI R +SVES+ ++D G   ++ +++MVPPHEYLARE
Sbjct: 121 AAAASPRGHHMATSAPVNVPDWSKIYRVDSVESIHDSDDG--LDDGDSEMVPPHEYLARE 180

Query: 181 YARSRNTAAATSVLEGVGRTLKGRDMRRVRDAVWSQTGFDG 184
           YARS+    A SV EGVGRTLKGRD+RRVRDAVWSQTGFDG
Sbjct: 181 YARSKKMGGA-SVFEGVGRTLKGRDLRRVRDAVWSQTGFDG 217

[Close]

BLAST of CmaCh18G002530.1 vs. TAIR10
Match: AT1G11700.1 (AT1G11700.1 Protein of unknown function, DUF584)

HSP 1 Score: 140.6 bits (353), Expect = 9.7e-34
Identity = 94/214 (43.93%), Postives = 125/214 (58.41%), Query Frame = 1


Query: 1   MAKGRKLGINRSERFLGS-YGNGYGQGSNKGDESSEFREEDVWA--------MIDNSNST 60
           MA+GRKL +++SER+LGS Y  G   G++  DES E  EED+W+        M+++  + 
Sbjct: 1   MARGRKLTMSQSERYLGSSYSYGDSNGNSATDES-ELTEEDIWSHAVDHSPEMLESHGAW 60

Query: 61  NGEDESMTVRNRRRSTPLDEPNVGGVSIAFQDSNRTAR---------------------G 120
           N  D    VRN R          GG+S+AF+D++ + R                      
Sbjct: 61  NTRDA--VVRNGRVG--------GGLSLAFEDASSSPRIVHQIRGGGEGGGGGGGGGRVE 120

Query: 121 RHIAASAPMNVPDWSKILRAESVESLPETDGGGYYNNDEADMVPPHEYLAR-EYARSRNT 180
           R +A+SAP+NVPDWSKI R  SVES+ E+D       D   M+PPHEYLA+ +  RSR +
Sbjct: 121 RQLASSAPVNVPDWSKIYRVNSVESIHESDEEE--EEDSGMMMPPHEYLAKSQQRRSRKS 180

Query: 181 AAATSVLEGVGRTLKGRDMRRVRDAVWSQTGFDG 184
               SV EGVGRTLKGR++RRVRDA+WSQTGF G
Sbjct: 181 GGGGSVFEGVGRTLKGRELRRVRDAIWSQTGFYG 201

[Close]

BLAST of CmaCh18G002530.1 vs. TAIR10
Match: AT1G61930.1 (AT1G61930.1 Protein of unknown function, DUF584)

HSP 1 Score: 135.6 bits (340), Expect = 3.1e-32
Identity = 92/206 (44.66%), Postives = 120/206 (58.25%), Query Frame = 1


Query: 1   MAKGRK-LGINRSERFLGSYGNGYGQGSNKGDESSEFREEDVWAMIDNSNSTNGEDESMT 60
           MAKGRK   +NRS+R+LGSY  G   G++  DE  E  EED+W+     + T   +ES  
Sbjct: 1   MAKGRKPTTMNRSDRYLGSYTYGDSHGNSVTDEL-ELGEEDIWSPAVIHDDTTENEESYG 60

Query: 61  VRNRRRSTPLDEPNVGGVSIAFQDS------------NRTARG--------RHIAASAPM 120
             N R +T      VGG+S+AF+ S             +   G        R +A+SAP+
Sbjct: 61  TWNLR-ATLGKNGRVGGLSLAFEGSLVAPPSSSPMIVQKIHGGGGEGEEDRRKLASSAPV 120

Query: 121 NVPDWSKILRAESVESLPETDGGGYYNNDEADMVPPHEYLAREYARSRNT--AAATSVLE 180
           NVPDWSKI R +SVES+ E D      ++E+ M+PPHEYLA+  AR          SV +
Sbjct: 121 NVPDWSKIYRVDSVESIHELDDEDD-EDEESGMMPPHEYLAKSQARRSRKIGGGGASVFD 180

Query: 181 GVGRTLKGRDMRRVRDAVWSQTGFDG 184
           GVGRTLKGR++RRVRDA+WSQTGF G
Sbjct: 181 GVGRTLKGRELRRVRDAIWSQTGFYG 203

[Close]

BLAST of CmaCh18G002530.1 vs. TAIR10
Match: AT4G21930.1 (AT4G21930.1 Protein of unknown function, DUF584)

HSP 1 Score: 127.9 bits (320), Expect = 6.5e-30
Identity = 89/196 (45.41%), Postives = 113/196 (57.65%), Query Frame = 1


Query: 1   MAKGRKLGINRSERFLGSYGNGYGQGSNKGDESSEFR--EEDVWAMIDNSNSTNGEDESM 60
           M KGR L I+RSERFLGS+        + G+ + E    EEDVW++++       E + +
Sbjct: 1   MGKGRSLPISRSERFLGSHQQSDDHHVD-GETTFELELMEEDVWSVVEPD-----EPKEL 60

Query: 61  TVRNRR--RSTPLDEPNVGGVSIAFQDSNRTARGRHIAASAPMNVPDWSKILRAESVESL 120
              N R   ++  +    GG        +   R RH+A SAP+ VPDWSKIL+ ESV+S+
Sbjct: 61  GAWNARSLEASGSEWRRKGGRVSDLTVPSDGQRKRHVATSAPVKVPDWSKILKVESVKSM 120

Query: 121 PETDGGGYYNNDEAD---------MVPPHEYLAREYARSRNTAAATSVLEGVGRTLKGRD 180
              +     +ND AD         MVPPHEY+A   ARSRN    +SV  GVGRTLKGRD
Sbjct: 121 HNNNN----DNDNADVADCDWESAMVPPHEYVA---ARSRNGDGGSSVFLGVGRTLKGRD 180

Query: 181 MRRVRDAVWSQTGFDG 184
           MRRVRDAVWSQTGF G
Sbjct: 181 MRRVRDAVWSQTGFYG 183

[Close]

BLAST of CmaCh18G002530.1 vs. TAIR10
Match: AT4G21970.1 (AT4G21970.1 Protein of unknown function, DUF584)

HSP 1 Score: 87.4 bits (215), Expect = 9.8e-18
Identity = 52/147 (35.37%), Postives = 79/147 (53.74%), Query Frame = 1


Query: 35  EFREEDVWAMIDNSNSTNGEDESMTVRNRRRSTPLDEPNVGGVSIAFQDSNRTARGRHIA 94
           EF+EE+VW+++  S  T G +  M+  N   S           S  +        G    
Sbjct: 6   EFQEEEVWSVLRESE-TQGPEMKMSKSNNLFSASSSS------SARYIPKGNEVSGGAKQ 65

Query: 95  ASAPMNVPDWSKILRAESVESLPETDGGGYYNNDEADMVPPHEYLAREYARSRNTAAATS 154
           +SAPMN+PDWSK+       +          ++DE  MVPPHE +A+  AR++   ++ S
Sbjct: 66  SSAPMNIPDWSKVYGYSKKNTSSHLHSWAIDDDDEGSMVPPHELVAKRLARTQ--ISSFS 125

Query: 155 VLEGVGRTLKGRDMRRVRDAVWSQTGF 182
           + EG+GRTLKGRD+ + R+AV ++TGF
Sbjct: 126 MCEGIGRTLKGRDLSKTRNAVLTRTGF 143

[Close]

BLAST of CmaCh18G002530.1 vs. TAIR10
Match: AT5G60680.1 (AT5G60680.1 Protein of unknown function, DUF584)

HSP 1 Score: 87.0 bits (214), Expect = 1.3e-17
Identity = 67/185 (36.22%), Postives = 96/185 (51.89%), Query Frame = 1


Query: 1   MAKGRKLGINRSERFLGSYGNGYGQGSNKGDESSEFREEDVWAMIDNSNSTNGEDESMTV 60
           MA G+      S RFLG+    Y   S+ G    EF E D++  I + +       S +V
Sbjct: 1   MATGKSYYARPSYRFLGTDQPSYFTASDSG---LEFDESDLFNPIHSDSPDFCRKISSSV 60

Query: 61  RNRRRSTPLDEPNVGGVSIAFQDSNRTARGRHIAASAPMNVPDWSKILRAESVE----SL 120
           R+ ++S+  + P+    + A             A+S P+NVPDWSKILR E  +    S+
Sbjct: 61  RSGKKSS--NRPSAASSAAA-------------ASSLPVNVPDWSKILRGEYRDNRRRSI 120

Query: 121 PETDGGGYYNNDEADMVPPHEYLAREYARSRNTAAATSVLEGVGRTLKGRDMRRVRDAVW 180
            + D     N D  D +PPHE+LA+         A+ SV EGVGRTLKGRD+ RVR+A++
Sbjct: 121 EDNDDDDDDNEDGGDWLPPHEFLAK------TRMASFSVHEGVGRTLKGRDLSRVRNAIF 161

Query: 181 SQTGF 182
            + GF
Sbjct: 181 EKFGF 161

[Close]

BLAST of CmaCh18G002530.1 vs. NCBI nr
Match: gi|659067746|ref|XP_008441099.1| (PREDICTED: uncharacterized protein LOC103485322 [Cucumis melo])

HSP 1 Score: 284.6 bits (727), Expect = 1.2e-73
Identity = 152/197 (77.16%), Postives = 167/197 (84.77%), Query Frame = 1


Query: 1   MAKGRKLGINRSERFLGSYGN-GYGQGSNKGDESSEFREEDVWAMIDNSNSTNGEDES-- 60
           MAKGRKLGINR+ERFLGSY N G+ QGS  GD+SSE REEDVW++IDN NS +GEDE+  
Sbjct: 1   MAKGRKLGINRNERFLGSYSNNGHAQGSYNGDDSSELREEDVWSIIDNRNSADGEDENYG 60

Query: 61  -MTVRNRRRSTPLDEPNVGGVSIAFQDS-NRTA---------RGRHIAASAPMNVPDWSK 120
            +TVR RRRSTP DE ++GGVSIAFQDS +RTA         RGRH++ASAP+NVPDWSK
Sbjct: 61  NITVRTRRRSTPRDERHLGGVSIAFQDSGSRTAVATSQGNNPRGRHVSASAPVNVPDWSK 120

Query: 121 ILRAESVESLPETDGGGYYNNDEADMVPPHEYLAREYARSRNTAAATSVLEGVGRTLKGR 180
           IL AESVESL E D GGYYNNDE +MVPPHEYLAREYARSRNTAAATSV EGVGRTLKGR
Sbjct: 121 ILWAESVESLREMDDGGYYNNDETEMVPPHEYLAREYARSRNTAAATSVFEGVGRTLKGR 180

Query: 181 DMRRVRDAVWSQTGFDG 184
           DMRRVRDAVWSQTGFDG
Sbjct: 181 DMRRVRDAVWSQTGFDG 197

[Close]

BLAST of CmaCh18G002530.1 vs. NCBI nr
Match: gi|449454873|ref|XP_004145178.1| (PREDICTED: uncharacterized protein LOC101209631 [Cucumis sativus])

HSP 1 Score: 278.5 bits (711), Expect = 8.5e-72
Identity = 149/196 (76.02%), Postives = 163/196 (83.16%), Query Frame = 1


Query: 1   MAKGRKLGINRSERFLGSYGNGYGQGSNKGDESSEFREEDVWAMIDNSNSTNGEDES--- 60
           MAKGRKLGINR+ERFLGSY NG+ Q S  GD+SSE REEDVW++IDN NS + EDE+   
Sbjct: 1   MAKGRKLGINRNERFLGSYSNGHAQASYNGDDSSELREEDVWSIIDNKNSADAEDENYGN 60

Query: 61  MTVRNRRRSTPLDEPNVGGVSIAFQDS-NRTA---------RGRHIAASAPMNVPDWSKI 120
           +T+R RRRSTP DE NVGGVSIAFQDS +RTA         RGRH++ASAP+NVPDWSKI
Sbjct: 61  ITLRTRRRSTPRDERNVGGVSIAFQDSGSRTAAATSQGNNPRGRHVSASAPVNVPDWSKI 120

Query: 121 LRAESVESLPETDGGGYYNNDEADMVPPHEYLAREYARSRNTAAATSVLEGVGRTLKGRD 180
           L AES  SL E D GGYYNNDE +MVPPHEYLAREYARSRNTAAATSV EGVGRTLKGRD
Sbjct: 121 LWAES--SLREMDDGGYYNNDETEMVPPHEYLAREYARSRNTAAATSVFEGVGRTLKGRD 180

Query: 181 MRRVRDAVWSQTGFDG 184
           MRRVRDAVWSQTGFDG
Sbjct: 181 MRRVRDAVWSQTGFDG 194

[Close]

BLAST of CmaCh18G002530.1 vs. NCBI nr
Match: gi|747096309|ref|XP_011096069.1| (PREDICTED: uncharacterized protein LOC105175348 [Sesamum indicum])

HSP 1 Score: 192.2 bits (487), Expect = 8.0e-46
Identity = 116/215 (53.95%), Postives = 138/215 (64.19%), Query Frame = 1


Query: 1   MAKGRKLGINRSERFLGSYGNGYGQGSNKGDESSEFREEDVWAMIDNSNSTNGEDES--- 60
           MAKGRKL  +RSERFLGS G+ +GQG+    ++SE  EEDVW+++D++   NGED S   
Sbjct: 1   MAKGRKLTTSRSERFLGSLGHNHGQGT--ASDASELGEEDVWSVVDDT--VNGEDHSGNG 60

Query: 61  -----------MTVRNRRRSTPLDEPNVGGVSIAFQDSNRTA------------------ 120
                         R+RR   P D   VGG+S+AF D + T+                  
Sbjct: 61  EFSSRASDGVFSVYRSRRPPAPADHHPVGGLSLAFDDPSNTSSQRILHQFRPQDSVAESP 120

Query: 121 RGRHIAASAPMNVPDWSKILRAESVESLPETDGGGYYNNDEADMVPPHEYLAREYARSRN 180
           RGRH+A SAP+NVPDWSKI R  SVESL + D    +N+ E  +VPPHEYLAREYARSR 
Sbjct: 121 RGRHMATSAPVNVPDWSKIYRVNSVESLHDLDDS--FNDSE--LVPPHEYLAREYARSRK 180

Query: 181 TAAATSVLEGVGRTLKGRDMRRVRDAVWSQTGFDG 184
           TAA  SV EGVGRTLKGRDM RVRDAVWSQTGFDG
Sbjct: 181 TAA-NSVFEGVGRTLKGRDMSRVRDAVWSQTGFDG 206

[Close]

BLAST of CmaCh18G002530.1 vs. NCBI nr
Match: gi|566260145|ref|XP_006389626.1| (hypothetical protein POPTR_0021s00760g [Populus trichocarpa])

HSP 1 Score: 188.0 bits (476), Expect = 1.5e-44
Identity = 117/215 (54.42%), Postives = 142/215 (66.05%), Query Frame = 1


Query: 1   MAKGRKLGINRSERFLGS---YGNGYGQGSNKGDESSEFREEDVWAMIDNS--------N 60
           MAKGR+L  +RSER LGS   YGNG     N   E SE  EEDVW+M+D++        +
Sbjct: 1   MAKGRRLTTSRSERLLGSNYSYGNGQVPMVN---EVSELGEEDVWSMVDDTADRSDSAVS 60

Query: 61  STNGEDESMTVRNRRRSTPLDEPNVGGVSIAFQDS----NRTA--------RG------- 120
           ++NG          RR  P D+ N+GG+S+AF+DS    N+TA        RG       
Sbjct: 61  NSNGAWNPRAELESRRRIPRDDRNMGGLSLAFEDSSSGGNKTASSRIVHQFRGNDLVASA 120

Query: 121 --RHIAASAPMNVPDWSKILRAESVESLPETDGGGYYNNDEADMVPPHEYLAREYARSRN 180
             RH+A SAP+NVPDWSKI R  SVESL ++D G  +++ E++MVPPHEYLAREYARSR 
Sbjct: 121 SPRHMATSAPVNVPDWSKIYRVNSVESLHDSDDG--FDDQESEMVPPHEYLAREYARSRK 180

Query: 181 TAAATSVLEGVGRTLKGRDMRRVRDAVWSQTGFDG 184
           T  A SV+EGVGRTLKGRDMRRVRDAVWSQTGFDG
Sbjct: 181 TGGA-SVVEGVGRTLKGRDMRRVRDAVWSQTGFDG 209

[Close]

BLAST of CmaCh18G002530.1 vs. NCBI nr
Match: gi|802779225|ref|XP_012091349.1| (PREDICTED: uncharacterized protein LOC105649338 [Jatropha curcas])

HSP 1 Score: 187.6 bits (475), Expect = 2.0e-44
Identity = 113/221 (51.13%), Postives = 143/221 (64.71%), Query Frame = 1


Query: 1   MAKGRKLGINRSERFLGSYGNGYGQGSNKGD-ESSEFREEDVWAMIDNSNSTNGEDE--- 60
           MAKGR+L  +RSER LGS+   Y  G ++ D +SSE  EEDVW+M+D++   N ++    
Sbjct: 1   MAKGRRLTTSRSERLLGSFA--YANGQDRTDTDSSELGEEDVWSMVDDAGDRNEQNVDNS 60

Query: 61  --------------SMTVRNRRRSTPLDEPNVGGVSIAFQDSNR---------------- 120
                         SMT R+RRR  P D  +VGG+S+AF+DS+                 
Sbjct: 61  QGDWNTRADVESNGSMTTRSRRR-VPRDNRHVGGLSLAFEDSSAKTASSRILHQFRGHDS 120

Query: 121 ----TARGRHIAASAPMNVPDWSKILRAESVESLPETDGGGYYNNDEADMVPPHEYLARE 180
                A  RH+A SAP+NVPDWSKILR +SVESL E+D G  +++ +++MVPPHEYLARE
Sbjct: 121 VASPAASPRHMATSAPVNVPDWSKILRVDSVESLHESDDG--FDDRDSEMVPPHEYLARE 180

Query: 181 YARSRNTAAATSVLEGVGRTLKGRDMRRVRDAVWSQTGFDG 184
           YARS+    A SV EGVGRTLKGRD+RRVRDAVWSQTGFDG
Sbjct: 181 YARSKKMGGA-SVFEGVGRTLKGRDLRRVRDAVWSQTGFDG 215

The following BLAST results are available for this feature:

BLAST of CmaCh18G002530.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmaCh18G002530.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LU86_CUCSA	5.9e-72	76.02	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G063480 PE=4 SV=1	[more]
F6H7M5_VITVI	5.6e-46	55.72	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_10s0116g01810 PE=4 SV=...	[more]
U7DZT9_POPTR	1.0e-44	54.42	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0021s00760g PE=4 SV=1	[more]
A0A067JAH7_JATCU	1.4e-44	51.13	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21223 PE=4 SV=1	[more]
A0A061GHT2_THECC	4.0e-44	50.23	Uncharacterized protein OS=Theobroma cacao GN=TCM_030219 PE=4 SV=1	[more]

BLAST of CmaCh18G002530.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G11700.1	9.7e-34	43.93	Protein of unknown function, DUF584	[more]
AT1G61930.1	3.1e-32	44.66	Protein of unknown function, DUF584	[more]
AT4G21930.1	6.5e-30	45.41	Protein of unknown function, DUF584	[more]
AT4G21970.1	9.8e-18	35.37	Protein of unknown function, DUF584	[more]
AT5G60680.1	1.3e-17	36.22	Protein of unknown function, DUF584	[more]

BLAST of CmaCh18G002530.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659067746\|ref\|XP_008441099.1\|	1.2e-73	77.16	PREDICTED: uncharacterized protein LOC103485322 [Cucumis melo]	[more]
gi\|449454873\|ref\|XP_004145178.1\|	8.5e-72	76.02	PREDICTED: uncharacterized protein LOC101209631 [Cucumis sativus]	[more]
gi\|747096309\|ref\|XP_011096069.1\|	8.0e-46	53.95	PREDICTED: uncharacterized protein LOC105175348 [Sesamum indicum]	[more]
gi\|566260145\|ref\|XP_006389626.1\|	1.5e-44	54.42	hypothetical protein POPTR_0021s00760g [Populus trichocarpa]	[more]
gi\|802779225\|ref\|XP_012091349.1\|	2.0e-44	51.13	PREDICTED: uncharacterized protein LOC105649338 [Jatropha curcas]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR007608	Senescence_reg_S40

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmaCh18G002530	CmaCh18G002530	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmaCh18G002530.1	CmaCh18G002530.1-protein	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh18G002530.1.exon.1	CmaCh18G002530.1.exon.1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh18G002530.1.CDS.1	CmaCh18G002530.1.CDS.1	CDS

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007608	Senescence regulator S40	PFAM	PF04520	Senescence_reg	coord: 35..182 score: 1.9
None	No IPR available	PANTHER	PTHR33083	FAMILY NOT NAMED	coord: 9..183 score: 6.9
None	No IPR available	PANTHER	PTHR33083:SF11	SUBFAMILY NOT NAMED	coord: 9..183 score: 6.9