CmaCh18G002530 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh18G002530
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Senescence regulator
Location	Cma_Chr18 : 1348448 .. 1348999 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGAAAGGCCGGAAGTTAGGTATAAACAGGAGCGAGCGGTTTCTCGGGAGCTATGGAAATGGATACGGTCAAGGCTCCAATAAAGGAGATGAATCATCGGAGTTTCGTGAAGAAGATGTGTGGGCGATGATTGACAACAGCAATTCAACCAACGGTGAGGATGAGAGCATGACAGTAAGAAATCGCCGGAGATCAACGCCGCTTGATGAACCAAACGTCGGCGGAGTTTCGATTGCTTTTCAAGACTCCAACAGGACGGCACGTGGACGGCACATAGCGGCATCGGCTCCGATGAACGTGCCGGACTGGAGCAAGATTCTGAGGGCGGAATCGGTGGAGTCACTACCGGAGACGGACGGAGGAGGTTACTACAACAACGATGAGGCGGATATGGTGCCGCCGCACGAGTATTTGGCGAGGGAATACGCGAGGAGCCGGAATACTGCGGCGGCGACGTCAGTTTTGGAGGGCGTGGGGAGGACTCTGAAAGGGAGAGATATGAGAAGGGTTCGGGATGCGGTTTGGAGTCAGACCGGGTTCGATGGTTAA

mRNA sequence

ATGGCGAAAGGCCGGAAGTTAGGTATAAACAGGAGCGAGCGGTTTCTCGGGAGCTATGGAAATGGATACGGTCAAGGCTCCAATAAAGGAGATGAATCATCGGAGTTTCGTGAAGAAGATGTGTGGGCGATGATTGACAACAGCAATTCAACCAACGGTGAGGATGAGAGCATGACAGTAAGAAATCGCCGGAGATCAACGCCGCTTGATGAACCAAACGTCGGCGGAGTTTCGATTGCTTTTCAAGACTCCAACAGGACGGCACGTGGACGGCACATAGCGGCATCGGCTCCGATGAACGTGCCGGACTGGAGCAAGATTCTGAGGGCGGAATCGGTGGAGTCACTACCGGAGACGGACGGAGGAGGTTACTACAACAACGATGAGGCGGATATGGTGCCGCCGCACGAGTATTTGGCGAGGGAATACGCGAGGAGCCGGAATACTGCGGCGGCGACGTCAGTTTTGGAGGGCGTGGGGAGGACTCTGAAAGGGAGAGATATGAGAAGGGTTCGGGATGCGGTTTGGAGTCAGACCGGGTTCGATGGTTAA

Coding sequence (CDS)

ATGGCGAAAGGCCGGAAGTTAGGTATAAACAGGAGCGAGCGGTTTCTCGGGAGCTATGGAAATGGATACGGTCAAGGCTCCAATAAAGGAGATGAATCATCGGAGTTTCGTGAAGAAGATGTGTGGGCGATGATTGACAACAGCAATTCAACCAACGGTGAGGATGAGAGCATGACAGTAAGAAATCGCCGGAGATCAACGCCGCTTGATGAACCAAACGTCGGCGGAGTTTCGATTGCTTTTCAAGACTCCAACAGGACGGCACGTGGACGGCACATAGCGGCATCGGCTCCGATGAACGTGCCGGACTGGAGCAAGATTCTGAGGGCGGAATCGGTGGAGTCACTACCGGAGACGGACGGAGGAGGTTACTACAACAACGATGAGGCGGATATGGTGCCGCCGCACGAGTATTTGGCGAGGGAATACGCGAGGAGCCGGAATACTGCGGCGGCGACGTCAGTTTTGGAGGGCGTGGGGAGGACTCTGAAAGGGAGAGATATGAGAAGGGTTCGGGATGCGGTTTGGAGTCAGACCGGGTTCGATGGTTAA

Protein sequence

MAKGRKLGINRSERFLGSYGNGYGQGSNKGDESSEFREEDVWAMIDNSNSTNGEDESMTVRNRRRSTPLDEPNVGGVSIAFQDSNRTARGRHIAASAPMNVPDWSKILRAESVESLPETDGGGYYNNDEADMVPPHEYLAREYARSRNTAAATSVLEGVGRTLKGRDMRRVRDAVWSQTGFDG

Homology

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BLAST of CmaCh18G002530 vs. TrEMBL
Match: A0A0A0LU86_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G063480 PE=4 SV=1)

HSP 1 Score: 278.5 bits (711), Expect = 5.9e-72
Identity = 149/196 (76.02%), Postives = 163/196 (83.16%), Query Frame = 1


Query: 1   MAKGRKLGINRSERFLGSYGNGYGQGSNKGDESSEFREEDVWAMIDNSNSTNGEDES--- 60
           MAKGRKLGINR+ERFLGSY NG+ Q S  GD+SSE REEDVW++IDN NS + EDE+   
Sbjct: 1   MAKGRKLGINRNERFLGSYSNGHAQASYNGDDSSELREEDVWSIIDNKNSADAEDENYGN 60

Query: 61  MTVRNRRRSTPLDEPNVGGVSIAFQDS-NRTA---------RGRHIAASAPMNVPDWSKI 120
           +T+R RRRSTP DE NVGGVSIAFQDS +RTA         RGRH++ASAP+NVPDWSKI
Sbjct: 61  ITLRTRRRSTPRDERNVGGVSIAFQDSGSRTAAATSQGNNPRGRHVSASAPVNVPDWSKI 120

Query: 121 LRAESVESLPETDGGGYYNNDEADMVPPHEYLAREYARSRNTAAATSVLEGVGRTLKGRD 180
           L AES  SL E D GGYYNNDE +MVPPHEYLAREYARSRNTAAATSV EGVGRTLKGRD
Sbjct: 121 LWAES--SLREMDDGGYYNNDETEMVPPHEYLAREYARSRNTAAATSVFEGVGRTLKGRD 180

Query: 181 MRRVRDAVWSQTGFDG 184
           MRRVRDAVWSQTGFDG
Sbjct: 181 MRRVRDAVWSQTGFDG 194

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BLAST of CmaCh18G002530 vs. TrEMBL
Match: F6H7M5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_10s0116g01810 PE=4 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 5.6e-46
Identity = 112/201 (55.72%), Postives = 133/201 (66.17%), Query Frame = 1


Query: 1   MAKGRKLGINRSERFLGSYGNGYGQGSNKGDESSEFREEDVWAMIDNSNSTNGEDESMTV 60
           MAKGRKL  +RSER LGS+  G+GQG+  G +SSE  EEDVW+M+D+    +        
Sbjct: 1   MAKGRKLTTSRSERLLGSFAYGHGQGA--GADSSELGEEDVWSMVDDMVERDDHPAMRNH 60

Query: 61  RNRRRSTPLDEPNVGGVSIAFQDSNRTA------------------RGRHIAASAPMNVP 120
            +RRR    D   VGG+S+AF DS +T                   RG H+A SAP+NVP
Sbjct: 61  HHRRRIPRDDRHQVGGLSLAFDDSGKTTSSRIVHQYRPQDGVTPSPRGHHMATSAPVNVP 120

Query: 121 DWSKILRAESVESLPETDGGGYYNNDEADMVPPHEYLAREYARSRNTAAATSVLEGVGRT 180
           DW KILR +SVESL ++D     ++ E +MVPPHEYLAREYA SR  AA TSVLEGVGRT
Sbjct: 121 DWHKILRVDSVESLHDSD-----DDRELEMVPPHEYLAREYAASRKMAA-TSVLEGVGRT 180

Query: 181 LKGRDMRRVRDAVWSQTGFDG 184
           LKGRDM RVRDAVWSQTGFDG
Sbjct: 181 LKGRDMSRVRDAVWSQTGFDG 193

[Close]

BLAST of CmaCh18G002530 vs. TrEMBL
Match: U7DZT9_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0021s00760g PE=4 SV=1)

HSP 1 Score: 188.0 bits (476), Expect = 1.0e-44
Identity = 117/215 (54.42%), Postives = 142/215 (66.05%), Query Frame = 1


Query: 1   MAKGRKLGINRSERFLGS---YGNGYGQGSNKGDESSEFREEDVWAMIDNS--------N 60
           MAKGR+L  +RSER LGS   YGNG     N   E SE  EEDVW+M+D++        +
Sbjct: 1   MAKGRRLTTSRSERLLGSNYSYGNGQVPMVN---EVSELGEEDVWSMVDDTADRSDSAVS 60

Query: 61  STNGEDESMTVRNRRRSTPLDEPNVGGVSIAFQDS----NRTA--------RG------- 120
           ++NG          RR  P D+ N+GG+S+AF+DS    N+TA        RG       
Sbjct: 61  NSNGAWNPRAELESRRRIPRDDRNMGGLSLAFEDSSSGGNKTASSRIVHQFRGNDLVASA 120

Query: 121 --RHIAASAPMNVPDWSKILRAESVESLPETDGGGYYNNDEADMVPPHEYLAREYARSRN 180
             RH+A SAP+NVPDWSKI R  SVESL ++D G  +++ E++MVPPHEYLAREYARSR 
Sbjct: 121 SPRHMATSAPVNVPDWSKIYRVNSVESLHDSDDG--FDDQESEMVPPHEYLAREYARSRK 180

Query: 181 TAAATSVLEGVGRTLKGRDMRRVRDAVWSQTGFDG 184
           T  A SV+EGVGRTLKGRDMRRVRDAVWSQTGFDG
Sbjct: 181 TGGA-SVVEGVGRTLKGRDMRRVRDAVWSQTGFDG 209

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BLAST of CmaCh18G002530 vs. TrEMBL
Match: A0A067JAH7_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21223 PE=4 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 1.4e-44
Identity = 113/221 (51.13%), Postives = 143/221 (64.71%), Query Frame = 1


Query: 1   MAKGRKLGINRSERFLGSYGNGYGQGSNKGD-ESSEFREEDVWAMIDNSNSTNGEDE--- 60
           MAKGR+L  +RSER LGS+   Y  G ++ D +SSE  EEDVW+M+D++   N ++    
Sbjct: 1   MAKGRRLTTSRSERLLGSFA--YANGQDRTDTDSSELGEEDVWSMVDDAGDRNEQNVDNS 60

Query: 61  --------------SMTVRNRRRSTPLDEPNVGGVSIAFQDSNR---------------- 120
                         SMT R+RRR  P D  +VGG+S+AF+DS+                 
Sbjct: 61  QGDWNTRADVESNGSMTTRSRRR-VPRDNRHVGGLSLAFEDSSAKTASSRILHQFRGHDS 120

Query: 121 ----TARGRHIAASAPMNVPDWSKILRAESVESLPETDGGGYYNNDEADMVPPHEYLARE 180
                A  RH+A SAP+NVPDWSKILR +SVESL E+D G  +++ +++MVPPHEYLARE
Sbjct: 121 VASPAASPRHMATSAPVNVPDWSKILRVDSVESLHESDDG--FDDRDSEMVPPHEYLARE 180

Query: 181 YARSRNTAAATSVLEGVGRTLKGRDMRRVRDAVWSQTGFDG 184
           YARS+    A SV EGVGRTLKGRD+RRVRDAVWSQTGFDG
Sbjct: 181 YARSKKMGGA-SVFEGVGRTLKGRDLRRVRDAVWSQTGFDG 215

[Close]

BLAST of CmaCh18G002530 vs. TrEMBL
Match: A0A061GHT2_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_030219 PE=4 SV=1)

HSP 1 Score: 186.0 bits (471), Expect = 4.0e-44
Identity = 111/221 (50.23%), Postives = 138/221 (62.44%), Query Frame = 1


Query: 1   MAKGRKLGINRSERFLGSYGNGYGQGSNKGDESSEFREEDVWAMIDN------SNSTNGE 60
           MAKGR+L  +RSERFLGSY  G+  G    DE  E  EEDVW+M+DN       N  N +
Sbjct: 1   MAKGRRLTTSRSERFLGSYSYGHSLGDAVTDEP-ELGEEDVWSMVDNVAERDDQNVNNSQ 60

Query: 61  DE-------------SMTVRNRRRSTPLDEPNVGGVSIAFQDSNRTA------------- 120
            E             ++ VR  RR  P  + +VGG+S+AF+DS+ T              
Sbjct: 61  SEWSPRAEAENNGNGNVDVRGGRRRVPRGDRHVGGLSLAFEDSSSTKPRIVHQFRGHDGM 120

Query: 121 ------RGRHIAASAPMNVPDWSKILRAESVESLPETDGGGYYNNDEADMVPPHEYLARE 180
                 RG H+A SAP+NVPDWSKI R +SVES+ ++D G   ++ +++MVPPHEYLARE
Sbjct: 121 AAAASPRGHHMATSAPVNVPDWSKIYRVDSVESIHDSDDG--LDDGDSEMVPPHEYLARE 180

Query: 181 YARSRNTAAATSVLEGVGRTLKGRDMRRVRDAVWSQTGFDG 184
           YARS+    A SV EGVGRTLKGRD+RRVRDAVWSQTGFDG
Sbjct: 181 YARSKKMGGA-SVFEGVGRTLKGRDLRRVRDAVWSQTGFDG 217

[Close]

BLAST of CmaCh18G002530 vs. TAIR10
Match: AT1G11700.1 (AT1G11700.1 Protein of unknown function, DUF584)

HSP 1 Score: 140.6 bits (353), Expect = 9.7e-34
Identity = 94/214 (43.93%), Postives = 125/214 (58.41%), Query Frame = 1


Query: 1   MAKGRKLGINRSERFLGS-YGNGYGQGSNKGDESSEFREEDVWA--------MIDNSNST 60
           MA+GRKL +++SER+LGS Y  G   G++  DES E  EED+W+        M+++  + 
Sbjct: 1   MARGRKLTMSQSERYLGSSYSYGDSNGNSATDES-ELTEEDIWSHAVDHSPEMLESHGAW 60

Query: 61  NGEDESMTVRNRRRSTPLDEPNVGGVSIAFQDSNRTAR---------------------G 120
           N  D    VRN R          GG+S+AF+D++ + R                      
Sbjct: 61  NTRDA--VVRNGRVG--------GGLSLAFEDASSSPRIVHQIRGGGEGGGGGGGGGRVE 120

Query: 121 RHIAASAPMNVPDWSKILRAESVESLPETDGGGYYNNDEADMVPPHEYLAR-EYARSRNT 180
           R +A+SAP+NVPDWSKI R  SVES+ E+D       D   M+PPHEYLA+ +  RSR +
Sbjct: 121 RQLASSAPVNVPDWSKIYRVNSVESIHESDEEE--EEDSGMMMPPHEYLAKSQQRRSRKS 180

Query: 181 AAATSVLEGVGRTLKGRDMRRVRDAVWSQTGFDG 184
               SV EGVGRTLKGR++RRVRDA+WSQTGF G
Sbjct: 181 GGGGSVFEGVGRTLKGRELRRVRDAIWSQTGFYG 201

[Close]

BLAST of CmaCh18G002530 vs. TAIR10
Match: AT1G61930.1 (AT1G61930.1 Protein of unknown function, DUF584)

HSP 1 Score: 135.6 bits (340), Expect = 3.1e-32
Identity = 92/206 (44.66%), Postives = 120/206 (58.25%), Query Frame = 1


Query: 1   MAKGRK-LGINRSERFLGSYGNGYGQGSNKGDESSEFREEDVWAMIDNSNSTNGEDESMT 60
           MAKGRK   +NRS+R+LGSY  G   G++  DE  E  EED+W+     + T   +ES  
Sbjct: 1   MAKGRKPTTMNRSDRYLGSYTYGDSHGNSVTDEL-ELGEEDIWSPAVIHDDTTENEESYG 60

Query: 61  VRNRRRSTPLDEPNVGGVSIAFQDS------------NRTARG--------RHIAASAPM 120
             N R +T      VGG+S+AF+ S             +   G        R +A+SAP+
Sbjct: 61  TWNLR-ATLGKNGRVGGLSLAFEGSLVAPPSSSPMIVQKIHGGGGEGEEDRRKLASSAPV 120

Query: 121 NVPDWSKILRAESVESLPETDGGGYYNNDEADMVPPHEYLAREYARSRNT--AAATSVLE 180
           NVPDWSKI R +SVES+ E D      ++E+ M+PPHEYLA+  AR          SV +
Sbjct: 121 NVPDWSKIYRVDSVESIHELDDEDD-EDEESGMMPPHEYLAKSQARRSRKIGGGGASVFD 180

Query: 181 GVGRTLKGRDMRRVRDAVWSQTGFDG 184
           GVGRTLKGR++RRVRDA+WSQTGF G
Sbjct: 181 GVGRTLKGRELRRVRDAIWSQTGFYG 203

[Close]

BLAST of CmaCh18G002530 vs. TAIR10
Match: AT4G21930.1 (AT4G21930.1 Protein of unknown function, DUF584)

HSP 1 Score: 127.9 bits (320), Expect = 6.5e-30
Identity = 89/196 (45.41%), Postives = 113/196 (57.65%), Query Frame = 1


Query: 1   MAKGRKLGINRSERFLGSYGNGYGQGSNKGDESSEFR--EEDVWAMIDNSNSTNGEDESM 60
           M KGR L I+RSERFLGS+        + G+ + E    EEDVW++++       E + +
Sbjct: 1   MGKGRSLPISRSERFLGSHQQSDDHHVD-GETTFELELMEEDVWSVVEPD-----EPKEL 60

Query: 61  TVRNRR--RSTPLDEPNVGGVSIAFQDSNRTARGRHIAASAPMNVPDWSKILRAESVESL 120
              N R   ++  +    GG        +   R RH+A SAP+ VPDWSKIL+ ESV+S+
Sbjct: 61  GAWNARSLEASGSEWRRKGGRVSDLTVPSDGQRKRHVATSAPVKVPDWSKILKVESVKSM 120

Query: 121 PETDGGGYYNNDEAD---------MVPPHEYLAREYARSRNTAAATSVLEGVGRTLKGRD 180
              +     +ND AD         MVPPHEY+A   ARSRN    +SV  GVGRTLKGRD
Sbjct: 121 HNNNN----DNDNADVADCDWESAMVPPHEYVA---ARSRNGDGGSSVFLGVGRTLKGRD 180

Query: 181 MRRVRDAVWSQTGFDG 184
           MRRVRDAVWSQTGF G
Sbjct: 181 MRRVRDAVWSQTGFYG 183

[Close]

BLAST of CmaCh18G002530 vs. TAIR10
Match: AT4G21970.1 (AT4G21970.1 Protein of unknown function, DUF584)

HSP 1 Score: 87.4 bits (215), Expect = 9.8e-18
Identity = 52/147 (35.37%), Postives = 79/147 (53.74%), Query Frame = 1


Query: 35  EFREEDVWAMIDNSNSTNGEDESMTVRNRRRSTPLDEPNVGGVSIAFQDSNRTARGRHIA 94
           EF+EE+VW+++  S  T G +  M+  N   S           S  +        G    
Sbjct: 6   EFQEEEVWSVLRESE-TQGPEMKMSKSNNLFSASSSS------SARYIPKGNEVSGGAKQ 65

Query: 95  ASAPMNVPDWSKILRAESVESLPETDGGGYYNNDEADMVPPHEYLAREYARSRNTAAATS 154
           +SAPMN+PDWSK+       +          ++DE  MVPPHE +A+  AR++   ++ S
Sbjct: 66  SSAPMNIPDWSKVYGYSKKNTSSHLHSWAIDDDDEGSMVPPHELVAKRLARTQ--ISSFS 125

Query: 155 VLEGVGRTLKGRDMRRVRDAVWSQTGF 182
           + EG+GRTLKGRD+ + R+AV ++TGF
Sbjct: 126 MCEGIGRTLKGRDLSKTRNAVLTRTGF 143

[Close]

BLAST of CmaCh18G002530 vs. TAIR10
Match: AT5G60680.1 (AT5G60680.1 Protein of unknown function, DUF584)

HSP 1 Score: 87.0 bits (214), Expect = 1.3e-17
Identity = 67/185 (36.22%), Postives = 96/185 (51.89%), Query Frame = 1


Query: 1   MAKGRKLGINRSERFLGSYGNGYGQGSNKGDESSEFREEDVWAMIDNSNSTNGEDESMTV 60
           MA G+      S RFLG+    Y   S+ G    EF E D++  I + +       S +V
Sbjct: 1   MATGKSYYARPSYRFLGTDQPSYFTASDSG---LEFDESDLFNPIHSDSPDFCRKISSSV 60

Query: 61  RNRRRSTPLDEPNVGGVSIAFQDSNRTARGRHIAASAPMNVPDWSKILRAESVE----SL 120
           R+ ++S+  + P+    + A             A+S P+NVPDWSKILR E  +    S+
Sbjct: 61  RSGKKSS--NRPSAASSAAA-------------ASSLPVNVPDWSKILRGEYRDNRRRSI 120

Query: 121 PETDGGGYYNNDEADMVPPHEYLAREYARSRNTAAATSVLEGVGRTLKGRDMRRVRDAVW 180
            + D     N D  D +PPHE+LA+         A+ SV EGVGRTLKGRD+ RVR+A++
Sbjct: 121 EDNDDDDDDNEDGGDWLPPHEFLAK------TRMASFSVHEGVGRTLKGRDLSRVRNAIF 161

Query: 181 SQTGF 182
            + GF
Sbjct: 181 EKFGF 161

[Close]

BLAST of CmaCh18G002530 vs. NCBI nr
Match: gi|659067746|ref|XP_008441099.1| (PREDICTED: uncharacterized protein LOC103485322 [Cucumis melo])

HSP 1 Score: 284.6 bits (727), Expect = 1.2e-73
Identity = 152/197 (77.16%), Postives = 167/197 (84.77%), Query Frame = 1


Query: 1   MAKGRKLGINRSERFLGSYGN-GYGQGSNKGDESSEFREEDVWAMIDNSNSTNGEDES-- 60
           MAKGRKLGINR+ERFLGSY N G+ QGS  GD+SSE REEDVW++IDN NS +GEDE+  
Sbjct: 1   MAKGRKLGINRNERFLGSYSNNGHAQGSYNGDDSSELREEDVWSIIDNRNSADGEDENYG 60

Query: 61  -MTVRNRRRSTPLDEPNVGGVSIAFQDS-NRTA---------RGRHIAASAPMNVPDWSK 120
            +TVR RRRSTP DE ++GGVSIAFQDS +RTA         RGRH++ASAP+NVPDWSK
Sbjct: 61  NITVRTRRRSTPRDERHLGGVSIAFQDSGSRTAVATSQGNNPRGRHVSASAPVNVPDWSK 120

Query: 121 ILRAESVESLPETDGGGYYNNDEADMVPPHEYLAREYARSRNTAAATSVLEGVGRTLKGR 180
           IL AESVESL E D GGYYNNDE +MVPPHEYLAREYARSRNTAAATSV EGVGRTLKGR
Sbjct: 121 ILWAESVESLREMDDGGYYNNDETEMVPPHEYLAREYARSRNTAAATSVFEGVGRTLKGR 180

Query: 181 DMRRVRDAVWSQTGFDG 184
           DMRRVRDAVWSQTGFDG
Sbjct: 181 DMRRVRDAVWSQTGFDG 197

[Close]

BLAST of CmaCh18G002530 vs. NCBI nr
Match: gi|449454873|ref|XP_004145178.1| (PREDICTED: uncharacterized protein LOC101209631 [Cucumis sativus])

HSP 1 Score: 278.5 bits (711), Expect = 8.5e-72
Identity = 149/196 (76.02%), Postives = 163/196 (83.16%), Query Frame = 1


Query: 1   MAKGRKLGINRSERFLGSYGNGYGQGSNKGDESSEFREEDVWAMIDNSNSTNGEDES--- 60
           MAKGRKLGINR+ERFLGSY NG+ Q S  GD+SSE REEDVW++IDN NS + EDE+   
Sbjct: 1   MAKGRKLGINRNERFLGSYSNGHAQASYNGDDSSELREEDVWSIIDNKNSADAEDENYGN 60

Query: 61  MTVRNRRRSTPLDEPNVGGVSIAFQDS-NRTA---------RGRHIAASAPMNVPDWSKI 120
           +T+R RRRSTP DE NVGGVSIAFQDS +RTA         RGRH++ASAP+NVPDWSKI
Sbjct: 61  ITLRTRRRSTPRDERNVGGVSIAFQDSGSRTAAATSQGNNPRGRHVSASAPVNVPDWSKI 120

Query: 121 LRAESVESLPETDGGGYYNNDEADMVPPHEYLAREYARSRNTAAATSVLEGVGRTLKGRD 180
           L AES  SL E D GGYYNNDE +MVPPHEYLAREYARSRNTAAATSV EGVGRTLKGRD
Sbjct: 121 LWAES--SLREMDDGGYYNNDETEMVPPHEYLAREYARSRNTAAATSVFEGVGRTLKGRD 180

Query: 181 MRRVRDAVWSQTGFDG 184
           MRRVRDAVWSQTGFDG
Sbjct: 181 MRRVRDAVWSQTGFDG 194

[Close]

BLAST of CmaCh18G002530 vs. NCBI nr
Match: gi|747096309|ref|XP_011096069.1| (PREDICTED: uncharacterized protein LOC105175348 [Sesamum indicum])

HSP 1 Score: 192.2 bits (487), Expect = 8.0e-46
Identity = 116/215 (53.95%), Postives = 138/215 (64.19%), Query Frame = 1


Query: 1   MAKGRKLGINRSERFLGSYGNGYGQGSNKGDESSEFREEDVWAMIDNSNSTNGEDES--- 60
           MAKGRKL  +RSERFLGS G+ +GQG+    ++SE  EEDVW+++D++   NGED S   
Sbjct: 1   MAKGRKLTTSRSERFLGSLGHNHGQGT--ASDASELGEEDVWSVVDDT--VNGEDHSGNG 60

Query: 61  -----------MTVRNRRRSTPLDEPNVGGVSIAFQDSNRTA------------------ 120
                         R+RR   P D   VGG+S+AF D + T+                  
Sbjct: 61  EFSSRASDGVFSVYRSRRPPAPADHHPVGGLSLAFDDPSNTSSQRILHQFRPQDSVAESP 120

Query: 121 RGRHIAASAPMNVPDWSKILRAESVESLPETDGGGYYNNDEADMVPPHEYLAREYARSRN 180
           RGRH+A SAP+NVPDWSKI R  SVESL + D    +N+ E  +VPPHEYLAREYARSR 
Sbjct: 121 RGRHMATSAPVNVPDWSKIYRVNSVESLHDLDDS--FNDSE--LVPPHEYLAREYARSRK 180

Query: 181 TAAATSVLEGVGRTLKGRDMRRVRDAVWSQTGFDG 184
           TAA  SV EGVGRTLKGRDM RVRDAVWSQTGFDG
Sbjct: 181 TAA-NSVFEGVGRTLKGRDMSRVRDAVWSQTGFDG 206

[Close]

BLAST of CmaCh18G002530 vs. NCBI nr
Match: gi|566260145|ref|XP_006389626.1| (hypothetical protein POPTR_0021s00760g [Populus trichocarpa])

HSP 1 Score: 188.0 bits (476), Expect = 1.5e-44
Identity = 117/215 (54.42%), Postives = 142/215 (66.05%), Query Frame = 1


Query: 1   MAKGRKLGINRSERFLGS---YGNGYGQGSNKGDESSEFREEDVWAMIDNS--------N 60
           MAKGR+L  +RSER LGS   YGNG     N   E SE  EEDVW+M+D++        +
Sbjct: 1   MAKGRRLTTSRSERLLGSNYSYGNGQVPMVN---EVSELGEEDVWSMVDDTADRSDSAVS 60

Query: 61  STNGEDESMTVRNRRRSTPLDEPNVGGVSIAFQDS----NRTA--------RG------- 120
           ++NG          RR  P D+ N+GG+S+AF+DS    N+TA        RG       
Sbjct: 61  NSNGAWNPRAELESRRRIPRDDRNMGGLSLAFEDSSSGGNKTASSRIVHQFRGNDLVASA 120

Query: 121 --RHIAASAPMNVPDWSKILRAESVESLPETDGGGYYNNDEADMVPPHEYLAREYARSRN 180
             RH+A SAP+NVPDWSKI R  SVESL ++D G  +++ E++MVPPHEYLAREYARSR 
Sbjct: 121 SPRHMATSAPVNVPDWSKIYRVNSVESLHDSDDG--FDDQESEMVPPHEYLAREYARSRK 180

Query: 181 TAAATSVLEGVGRTLKGRDMRRVRDAVWSQTGFDG 184
           T  A SV+EGVGRTLKGRDMRRVRDAVWSQTGFDG
Sbjct: 181 TGGA-SVVEGVGRTLKGRDMRRVRDAVWSQTGFDG 209

[Close]

BLAST of CmaCh18G002530 vs. NCBI nr
Match: gi|802779225|ref|XP_012091349.1| (PREDICTED: uncharacterized protein LOC105649338 [Jatropha curcas])

HSP 1 Score: 187.6 bits (475), Expect = 2.0e-44
Identity = 113/221 (51.13%), Postives = 143/221 (64.71%), Query Frame = 1


Query: 1   MAKGRKLGINRSERFLGSYGNGYGQGSNKGD-ESSEFREEDVWAMIDNSNSTNGEDE--- 60
           MAKGR+L  +RSER LGS+   Y  G ++ D +SSE  EEDVW+M+D++   N ++    
Sbjct: 1   MAKGRRLTTSRSERLLGSFA--YANGQDRTDTDSSELGEEDVWSMVDDAGDRNEQNVDNS 60

Query: 61  --------------SMTVRNRRRSTPLDEPNVGGVSIAFQDSNR---------------- 120
                         SMT R+RRR  P D  +VGG+S+AF+DS+                 
Sbjct: 61  QGDWNTRADVESNGSMTTRSRRR-VPRDNRHVGGLSLAFEDSSAKTASSRILHQFRGHDS 120

Query: 121 ----TARGRHIAASAPMNVPDWSKILRAESVESLPETDGGGYYNNDEADMVPPHEYLARE 180
                A  RH+A SAP+NVPDWSKILR +SVESL E+D G  +++ +++MVPPHEYLARE
Sbjct: 121 VASPAASPRHMATSAPVNVPDWSKILRVDSVESLHESDDG--FDDRDSEMVPPHEYLARE 180

Query: 181 YARSRNTAAATSVLEGVGRTLKGRDMRRVRDAVWSQTGFDG 184
           YARS+    A SV EGVGRTLKGRD+RRVRDAVWSQTGFDG
Sbjct: 181 YARSKKMGGA-SVFEGVGRTLKGRDLRRVRDAVWSQTGFDG 215

The following BLAST results are available for this feature:

BLAST of CmaCh18G002530 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmaCh18G002530 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LU86_CUCSA	5.9e-72	76.02	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G063480 PE=4 SV=1	[more]
F6H7M5_VITVI	5.6e-46	55.72	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_10s0116g01810 PE=4 SV=...	[more]
U7DZT9_POPTR	1.0e-44	54.42	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0021s00760g PE=4 SV=1	[more]
A0A067JAH7_JATCU	1.4e-44	51.13	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21223 PE=4 SV=1	[more]
A0A061GHT2_THECC	4.0e-44	50.23	Uncharacterized protein OS=Theobroma cacao GN=TCM_030219 PE=4 SV=1	[more]

BLAST of CmaCh18G002530 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G11700.1	9.7e-34	43.93	Protein of unknown function, DUF584	[more]
AT1G61930.1	3.1e-32	44.66	Protein of unknown function, DUF584	[more]
AT4G21930.1	6.5e-30	45.41	Protein of unknown function, DUF584	[more]
AT4G21970.1	9.8e-18	35.37	Protein of unknown function, DUF584	[more]
AT5G60680.1	1.3e-17	36.22	Protein of unknown function, DUF584	[more]

BLAST of CmaCh18G002530 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659067746\|ref\|XP_008441099.1\|	1.2e-73	77.16	PREDICTED: uncharacterized protein LOC103485322 [Cucumis melo]	[more]
gi\|449454873\|ref\|XP_004145178.1\|	8.5e-72	76.02	PREDICTED: uncharacterized protein LOC101209631 [Cucumis sativus]	[more]
gi\|747096309\|ref\|XP_011096069.1\|	8.0e-46	53.95	PREDICTED: uncharacterized protein LOC105175348 [Sesamum indicum]	[more]
gi\|566260145\|ref\|XP_006389626.1\|	1.5e-44	54.42	hypothetical protein POPTR_0021s00760g [Populus trichocarpa]	[more]
gi\|802779225\|ref\|XP_012091349.1\|	2.0e-44	51.13	PREDICTED: uncharacterized protein LOC105649338 [Jatropha curcas]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR007608	Senescence_reg_S40

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh18G002530.1	CmaCh18G002530.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007608	Senescence regulator S40	PFAM	PF04520	Senescence_reg	coord: 35..182 score: 1.9
None	No IPR available	PANTHER	PTHR33083	FAMILY NOT NAMED	coord: 9..183 score: 6.9
None	No IPR available	PANTHER	PTHR33083:SF11	SUBFAMILY NOT NAMED	coord: 9..183 score: 6.9

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh18G002530	Cucsa.045260	Cucumber (Gy14) v1	cgycmaB0039
CmaCh18G002530	Cucsa.085860	Cucumber (Gy14) v1	cgycmaB0163
CmaCh18G002530	Cla014455	Watermelon (97103) v1	cmawmB390
CmaCh18G002530	Cla019384	Watermelon (97103) v1	cmawmB371
CmaCh18G002530	Csa1G063480	Cucumber (Chinese Long) v2	cmacuB397
CmaCh18G002530	Csa6G513790	Cucumber (Chinese Long) v2	cmacuB424
CmaCh18G002530	MELO3C002459	Melon (DHL92) v3.5.1	cmameB356
CmaCh18G002530	MELO3C007387	Melon (DHL92) v3.5.1	cmameB380
CmaCh18G002530	ClCG03G004760	Watermelon (Charleston Gray)	cmawcgB358
CmaCh18G002530	ClCG01G022020	Watermelon (Charleston Gray)	cmawcgB348
CmaCh18G002530	CSPI01G10730	Wild cucumber (PI 183967)	cmacpiB401
CmaCh18G002530	CSPI06G33600	Wild cucumber (PI 183967)	cmacpiB427
CmaCh18G002530	CmoCh03G005580	Cucurbita moschata (Rifu)	cmacmoB418
CmaCh18G002530	CmoCh18G002740	Cucurbita moschata (Rifu)	cmacmoB409
CmaCh18G002530	Lsi01G004220	Bottle gourd (USVL1VR-Ls)	cmalsiB366
CmaCh18G002530	Lsi02G006030	Bottle gourd (USVL1VR-Ls)	cmalsiB373
CmaCh18G002530	Cp4.1LG09g08950	Cucurbita pepo (Zucchini)	cmacpeB414
CmaCh18G002530	Cp4.1LG10g09530	Cucurbita pepo (Zucchini)	cmacpeB420
CmaCh18G002530	MELO3C007387.2	Melon (DHL92) v3.6.1	cmamedB439
CmaCh18G002530	MELO3C002459.2	Melon (DHL92) v3.6.1	cmamedB413
CmaCh18G002530	CsaV3_1G010800	Cucumber (Chinese Long) v3	cmacucB0474
CmaCh18G002530	Cla97C03G055910	Watermelon (97103) v2	cmawmbB417
CmaCh18G002530	Cla97C01G021650	Watermelon (97103) v2	cmawmbB401
CmaCh18G002530	Bhi08G001511	Wax gourd	cmawgoB0534
CmaCh18G002530	CsGy1G010620	Cucumber (Gy14) v2	cgybcmaB093
CmaCh18G002530	Carg13699	Silver-seed gourd	carcmaB1275
CmaCh18G002530	Carg06851	Silver-seed gourd	carcmaB0693

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmaCh18G002530	CmaCh03G005340	Cucurbita maxima (Rimu)	cmacmaB398
CmaCh18G002530	CmaCh07G003080	Cucurbita maxima (Rimu)	cmacmaB412

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh18G002530	Wax gourd	cmawgoB0514
CmaCh18G002530	Cucurbita maxima (Rimu)	cmacmaB209
CmaCh18G002530	Cucurbita moschata (Rifu)	cmacmoB393
CmaCh18G002530	Cucurbita pepo (Zucchini)	cmacpeB442
CmaCh18G002530	Cucumber (Gy14) v2	cgybcmaB772
CmaCh18G002530	Silver-seed gourd	carcmaB1394
CmaCh18G002530	Cucumber (Chinese Long) v3	cmacucB0508