CmaCh17G013140.1 (mRNA) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: CDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCCATAATTGCTTCAAAGGTGGCAGTGATAGTGATGGTGGTGAGCTTAGCGGAGATGGCGATGGCGGTGGACGTGTGTGGTGTCAACAAGGACGATCTCAAAGCGTGCAAGCCATGGGTGATGAAACCGTGCCCAACCGAGCTACCGCCCGCCGCCTGTTGCGACGGGCTCTCGAAGGCGGACTTGGGTTGCTTTTGCAAGTATAAACACTCCATGTTGCTGTCCTCACTTGGGATTGATCTTGATCTTGCTCTTGCTTTGCCAGCCAAGTGCAGCCTTCCCAACACTCCCTCTTGCTCTTAA ATGGCCATAATTGCTTCAAAGGTGGCAGTGATAGTGATGGTGGTGAGCTTAGCGGAGATGGCGATGGCGGTGGACGTGTGTGGTGTCAACAAGGACGATCTCAAAGCGTGCAAGCCATGGGTGATGAAACCGTGCCCAACCGAGCTACCGCCCGCCGCCTGTTGCGACGGGCTCTCGAAGGCGGACTTGGGTTGCTTTTGCAAGTATAAACACTCCATGTTGCTGTCCTCACTTGGGATTGATCTTGATCTTGCTCTTGCTTTGCCAGCCAAGTGCAGCCTTCCCAACACTCCCTCTTGCTCTTAA ATGGCCATAATTGCTTCAAAGGTGGCAGTGATAGTGATGGTGGTGAGCTTAGCGGAGATGGCGATGGCGGTGGACGTGTGTGGTGTCAACAAGGACGATCTCAAAGCGTGCAAGCCATGGGTGATGAAACCGTGCCCAACCGAGCTACCGCCCGCCGCCTGTTGCGACGGGCTCTCGAAGGCGGACTTGGGTTGCTTTTGCAAGTATAAACACTCCATGTTGCTGTCCTCACTTGGGATTGATCTTGATCTTGCTCTTGCTTTGCCAGCCAAGTGCAGCCTTCCCAACACTCCCTCTTGCTCTTAA MAIIASKVAVIVMVVSLAEMAMAVDVCGVNKDDLKACKPWVMKPCPTELPPAACCDGLSKADLGCFCKYKHSMLLSSLGIDLDLALALPAKCSLPNTPSCS
BLAST of CmaCh17G013140.1 vs. Swiss-Prot
Match: DIRL1_ARATH (Putative lipid-transfer protein DIR1 OS=Arabidopsis thaliana GN=DIR1 PE=1 SV=1) HSP 1 Score: 85.5 bits (210), Expect = 3.6e-16 Identity = 42/93 (45.16%), Postives = 60/93 (64.52%), Query Frame = 1
BLAST of CmaCh17G013140.1 vs. TrEMBL
Match: A0A0A0K4Q7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G372360 PE=4 SV=1) HSP 1 Score: 138.7 bits (348), Expect = 4.0e-30 Identity = 63/94 (67.02%), Postives = 80/94 (85.11%), Query Frame = 1
BLAST of CmaCh17G013140.1 vs. TrEMBL
Match: A0A022S1B0_ERYGU (Uncharacterized protein (Fragment) OS=Erythranthe guttata GN=MIMGU_mgv1a022331mg PE=4 SV=1) HSP 1 Score: 96.7 bits (239), Expect = 1.8e-17 Identity = 46/78 (58.97%), Postives = 56/78 (71.79%), Query Frame = 1
BLAST of CmaCh17G013140.1 vs. TrEMBL
Match: A0A022S1I9_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a025642mg PE=4 SV=1) HSP 1 Score: 92.8 bits (229), Expect = 2.5e-16 Identity = 56/98 (57.14%), Postives = 68/98 (69.39%), Query Frame = 1
BLAST of CmaCh17G013140.1 vs. TrEMBL
Match: A0A078F1G2_BRANA (BnaC02g38640D protein OS=Brassica napus GN=BnaC02g38640D PE=4 SV=1) HSP 1 Score: 91.7 bits (226), Expect = 5.7e-16 Identity = 44/91 (48.35%), Postives = 61/91 (67.03%), Query Frame = 1
BLAST of CmaCh17G013140.1 vs. TrEMBL
Match: A0A164Z5V2_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_018625 PE=4 SV=1) HSP 1 Score: 91.3 bits (225), Expect = 7.4e-16 Identity = 48/94 (51.06%), Postives = 63/94 (67.02%), Query Frame = 1
BLAST of CmaCh17G013140.1 vs. TAIR10
Match: AT5G48485.1 (AT5G48485.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein) HSP 1 Score: 85.5 bits (210), Expect = 2.1e-17 Identity = 42/93 (45.16%), Postives = 60/93 (64.52%), Query Frame = 1
BLAST of CmaCh17G013140.1 vs. TAIR10
Match: AT5G48490.1 (AT5G48490.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein) HSP 1 Score: 76.3 bits (186), Expect = 1.2e-14 Identity = 41/97 (42.27%), Postives = 57/97 (58.76%), Query Frame = 1
BLAST of CmaCh17G013140.1 vs. NCBI nr
Match: gi|700189457|gb|KGN44690.1| (hypothetical protein Csa_7G372360 [Cucumis sativus]) HSP 1 Score: 138.7 bits (348), Expect = 5.8e-30 Identity = 63/94 (67.02%), Postives = 80/94 (85.11%), Query Frame = 1
BLAST of CmaCh17G013140.1 vs. NCBI nr
Match: gi|778727191|ref|XP_004150334.2| (PREDICTED: putative lipid-transfer protein DIR1 [Cucumis sativus]) HSP 1 Score: 138.7 bits (348), Expect = 5.8e-30 Identity = 63/94 (67.02%), Postives = 80/94 (85.11%), Query Frame = 1
BLAST of CmaCh17G013140.1 vs. NCBI nr
Match: gi|659092795|ref|XP_008447223.1| (PREDICTED: putative lipid-transfer protein DIR1 [Cucumis melo]) HSP 1 Score: 134.4 bits (337), Expect = 1.1e-28 Identity = 59/95 (62.11%), Postives = 79/95 (83.16%), Query Frame = 1
BLAST of CmaCh17G013140.1 vs. NCBI nr
Match: gi|604347964|gb|EYU46119.1| (hypothetical protein MIMGU_mgv1a022331mg, partial [Erythranthe guttata]) HSP 1 Score: 96.7 bits (239), Expect = 2.5e-17 Identity = 46/78 (58.97%), Postives = 56/78 (71.79%), Query Frame = 1
BLAST of CmaCh17G013140.1 vs. NCBI nr
Match: gi|848851631|ref|XP_012836760.1| (PREDICTED: putative lipid-transfer protein DIR1 [Erythranthe guttata]) HSP 1 Score: 96.3 bits (238), Expect = 3.3e-17 Identity = 51/88 (57.95%), Postives = 61/88 (69.32%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
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