CmaCh17G012650.1 (mRNA) Cucurbita maxima (Rimu)

NameCmaCh17G012650.1
TypemRNA
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionUnknown protein
LocationCma_Chr17 : 8609775 .. 8609915 (-)
Sequence length141
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACGGAGGCCGGCGACTGTCTAGACAGCTTCACACAGCCGCTGAAGGACCCATCGGCGCTGTCGGGCAACGGGGAGGCTATGGAAAATATTTGTAGTATCATCTTGGTTATAGCCAATCTTATTCTTGGGCTTGCCTAA

mRNA sequence

ATGACGGAGGCCGGCGACTGTCTAGACAGCTTCACACAGCCGCTGAAGGACCCATCGGCGCTGTCGGGCAACGGGGAGGCTATGGAAAATATTTGTAGTATCATCTTGGTTATAGCCAATCTTATTCTTGGGCTTGCCTAA

Coding sequence (CDS)

ATGACGGAGGCCGGCGACTGTCTAGACAGCTTCACACAGCCGCTGAAGGACCCATCGGCGCTGTCGGGCAACGGGGAGGCTATGGAAAATATTTGTAGTATCATCTTGGTTATAGCCAATCTTATTCTTGGGCTTGCCTAA

Protein sequence

MTEAGDCLDSFTQPLKDPSALSGNGEAMENICSIILVIANLILGLA
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR006501Pectinesterase_inhib_dom
Vocabulary: Molecular Function
TermDefinition
GO:0004857enzyme inhibitor activity
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0004857 enzyme inhibitor activity

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
CmaCh17G012650CmaCh17G012650gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
CmaCh17G012650.1CmaCh17G012650.1-proteinpolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmaCh17G012650.1.CDS.1CmaCh17G012650.1.CDS.1CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmaCh17G012650.1.exon.1CmaCh17G012650.1.exon.1exon


Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006501Pectinesterase inhibitor domainGENE3DG3DSA:1.20.140.40coord: 1..42
score: 8.