CmaCh17G010540.1 (mRNA) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh17G010540.1
Type	mRNA
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Unknown protein
Location	Cma_Chr17 : 7569598 .. 7570146 (+)
Sequence length	456

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGATCTCACCTCCATTTTCCTCACTCTCTTCCTCTTCTCCCTCTCCAAATTCTCCCTCTCTTTGGCCACCGTCTCGGCCAGGGATCAGGTTGGCTGTTCCATGTGCTCCAGTTGCGACAACCCATGTCAACTCCCGCCACCGCCTCCTCCTCCTCCTCCTCCGTTGGTTGTTGACTGCCCACCGCCTCCCTCACCGCCGCCACCGCCACTCCCCAAACCCGAATGCCCGCCGCCTCCCTCGCCCCCTTCGTGCGATGCATGCGTCTACCCTTCACCGCCGCCACCGTCCTCCATCCAGCCGTACACTCCAACCGACGGTGGGCAATATCCCGGCGTTGCTCCGCCGCCGCCGAACCCAATTTTACCGTATTTTCCTTACTATTATTACACTCCGCCTTCTGGGTCTGGTAAATCCGTTCCATTTTCATGGAAGTTCTTGCCTTTGTTGTTCGTTCTTCGACTCTAAAAATGTTCCCGATTTGTTTACGACGCCATTGAAGATCGGGAATGGGCGGCGGAGGAGATCAAAAGAAGGGTAGTATAA

mRNA sequence

ATGGCGGATCTCACCTCCATTTTCCTCACTCTCTTCCTCTTCTCCCTCTCCAAATTCTCCCTCTCTTTGGCCACCGTCTCGGCCAGGGATCAGGTTGGCTGTTCCATGTGCTCCAGTTGCGACAACCCATGTCAACTCCCGCCACCGCCTCCTCCTCCTCCTCCTCCGTTGGTTGTTGACTGCCCACCGCCTCCCTCACCGCCGCCACCGCCACTCCCCAAACCCGAATGCCCGCCGCCTCCCTCGCCCCCTTCGTGCGATGCATGCGTCTACCCTTCACCGCCGCCACCGTCCTCCATCCAGCCGTACACTCCAACCGACGGTGGGCAATATCCCGGCGTTGCTCCGCCGCCGCCGAACCCAATTTTACCGTATTTTCCTTACTATTATTACACTCCGCCTTCTGGGTCTGATCGGGAATGGGCGGCGGAGGAGATCAAAAGAAGGGTAGTATAA

Coding sequence (CDS)

ATGGCGGATCTCACCTCCATTTTCCTCACTCTCTTCCTCTTCTCCCTCTCCAAATTCTCCCTCTCTTTGGCCACCGTCTCGGCCAGGGATCAGGTTGGCTGTTCCATGTGCTCCAGTTGCGACAACCCATGTCAACTCCCGCCACCGCCTCCTCCTCCTCCTCCTCCGTTGGTTGTTGACTGCCCACCGCCTCCCTCACCGCCGCCACCGCCACTCCCCAAACCCGAATGCCCGCCGCCTCCCTCGCCCCCTTCGTGCGATGCATGCGTCTACCCTTCACCGCCGCCACCGTCCTCCATCCAGCCGTACACTCCAACCGACGGTGGGCAATATCCCGGCGTTGCTCCGCCGCCGCCGAACCCAATTTTACCGTATTTTCCTTACTATTATTACACTCCGCCTTCTGGGTCTGATCGGGAATGGGCGGCGGAGGAGATCAAAAGAAGGGTAGTATAA

Protein sequence

MADLTSIFLTLFLFSLSKFSLSLATVSARDQVGCSMCSSCDNPCQLPPPPPPPPPPLVVDCPPPPSPPPPPLPKPECPPPPSPPSCDACVYPSPPPPSSIQPYTPTDGGQYPGVAPPPPNPILPYFPYYYYTPPSGSDREWAAEEIKRRVV

Homology

[Close]

BLAST of CmaCh17G010540.1 vs. TrEMBL
Match: A0A0A0K5N4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G405965 PE=4 SV=1)

HSP 1 Score: 191.4 bits (485), Expect = 7.8e-46
Identity = 110/145 (75.86%), Postives = 122/145 (84.14%), Query Frame = 1


Query: 1   MADLTSIFLTLFLFSLSKFSL-SLATVSARDQVGCSMCSSCDNPCQLPPPPPPPPPPLVV 60
           MA+L SIFLT FL SL+KFSL S AT  A+DQVGCSMCS+CDNPCQLPPPPPPPP   VV
Sbjct: 1   MANLISIFLTFFLLSLTKFSLLSSATAVAKDQVGCSMCSTCDNPCQLPPPPPPPP---VV 60

Query: 61  DCPPPPSPPPPPLPKP-----ECPPPPSPPSCDACVYPSPPPPSSIQPYTPTDGGQYPGV 120
           +CPPPP  PPPP P P     +CPPPPSPPSCDACVYPSPPPPSS+QPY P+ GGQ+PG+
Sbjct: 61  ECPPPPPSPPPPSPPPPLPTSQCPPPPSPPSCDACVYPSPPPPSSVQPYPPSGGGQFPGI 120

Query: 121 APPPPNPILPYFPYYYYTPPSGSDR 140
           APPPPNPILPYFPYYYY+PPS S +
Sbjct: 121 APPPPNPILPYFPYYYYSPPSASPK 142

[Close]

BLAST of CmaCh17G010540.1 vs. TrEMBL
Match: A0A067JWJ5_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13988 PE=4 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 3.4e-17
Identity = 75/149 (50.34%), Postives = 91/149 (61.07%), Query Frame = 1


Query: 4   LTSIFLTLFLFSLSKFSLSLATVSARDQVGCSMCSSCDNPCQLPPPPPPPPPPLVVDCPP 63
           L S+F+ LFL + S  + ++   S++DQ+ C+MCS+CDNPCQ  PPPPPPP   V +CPP
Sbjct: 7   LFSVFI-LFLVNFSLTASTITPTSSKDQISCTMCSACDNPCQPLPPPPPPP---VSECPP 66

Query: 64  PPSPPPPPLPKPECPPPPSPPSCDACVYPSPPPPSS-----IQPYTPTDGGQ----YPG- 123
           PPSPPPP +   +CPPPP  PS     Y  PPPPS        P  P + G     YP  
Sbjct: 67  PPSPPPPAVVS-DCPPPPVTPSSGTYYYSPPPPPSEPTYIYSSPPPPENSGDSGEFYPPP 126

Query: 124 -----VAPPPPNPILPYFPYYYYTPPSGS 138
                 APPPPNPILPYFP+YYY PP  S
Sbjct: 127 NYGNYAAPPPPNPILPYFPFYYYNPPPSS 150

[Close]

BLAST of CmaCh17G010540.1 vs. TrEMBL
Match: A0A022S3E3_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a014805mg PE=4 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 7.2e-15
Identity = 80/149 (53.69%), Postives = 90/149 (60.40%), Query Frame = 1


Query: 7   IFLTLFLFS---LSKFSLSLATVSA--RDQVGCSMCSSCDNPCQLPPPPPPPPPPLVVDC 66
           +F   FLF    L +FSL++ T+SA  +DQ+ C+MCSSCDNPCQ P   PPPPPP  V  
Sbjct: 4   LFFFFFLFISTFLCEFSLAMTTISAVTKDQIACTMCSSCDNPCQ-PIFSPPPPPPQQVPS 63

Query: 67  PPPPSPPPPPLPKPECPPPPSPPSCDACVYP-SPPPPSSIQPYTPT------DGGQYP-- 126
           PPPPSPPPP     +CPPPPSPPS    VY  SPPPP     Y P        GG Y   
Sbjct: 64  PPPPSPPPP--AGLDCPPPPSPPSGGGGVYYFSPPPPMQQSYYYPPPYGGGGGGGAYNPP 123

Query: 127 --GVAPPPPNPILPYFPYYYYTPPSGSDR 140
             G   PPPNPI+ YFPYYYY  P GS R
Sbjct: 124 SYGYLTPPPNPIVSYFPYYYYNTPPGSPR 149

[Close]

BLAST of CmaCh17G010540.1 vs. TrEMBL
Match: V4S724_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10005954mg PE=4 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 7.4e-12
Identity = 70/141 (49.65%), Postives = 78/141 (55.32%), Query Frame = 1


Query: 25  TVSARDQVGCSMCSSCDNPCQLPPPPPPPPPPLVVDCPPPPSPPPPPLPKPECPPPPSPP 84
           T +A+ Q+ C+MCSSCDNPCQ  P PPPP P      PPPPSPPP     P CPPPPSPP
Sbjct: 34  TTTAKYQIECTMCSSCDNPCQPDPSPPPPSP-----SPPPPSPPPAS-SSPNCPPPPSPP 93

Query: 85  SCD-----ACVYPSPPPPSS-----IQPYTPTDG------------------GQYPGVAP 138
           S          Y SPPPPSS       P  P++G                  G YP   P
Sbjct: 94  SSSGGGSGGSYYYSPPPPSSPSSSYSSPPPPSNGNGNGNGGIGGLYFPPPNRGNYP--TP 153

[Close]

BLAST of CmaCh17G010540.1 vs. TrEMBL
Match: A0A078EG12_BRANA (BnaC09g02650D protein OS=Brassica napus GN=BnaC09g02650D PE=4 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 9.7e-12
Identity = 74/154 (48.05%), Postives = 83/154 (53.90%), Query Frame = 1


Query: 8   FLTLFLFSLSKFSLSLATVSARDQVGCSMCSSCDNPCQLPPPPPPPPPPLVVDCPPPPSP 67
           F TL +  L   SL+L   S  + V C+MCSSCDNPC   P  PPPPPP          P
Sbjct: 9   FSTLVVILL--LSLTLTVTSTDEVVSCTMCSSCDNPCNPVPSYPPPPPP--------SRP 68

Query: 68  PPPPLPKPECPPPPSPPSCD---ACVYPSP--------PPPSSIQPYTPT--DGGQYPGV 127
           PP P     CPPPPSPPS     +  YP P        PPP     Y P   DGG YP  
Sbjct: 69  PPSPSTTTACPPPPSPPSSGGGGSYYYPPPSQSGGGKYPPPYGDGKYPPPNGDGGNYP-- 128

Query: 128 APPPPNPILPYFPYYYYTPP--SGSDREWAAEEI 147
            PPPPNPI+PYFP+YY+TPP  SGSDR   +  I
Sbjct: 129 TPPPPNPIVPYFPFYYHTPPPGSGSDRFMGSSSI 150

[Close]

BLAST of CmaCh17G010540.1 vs. TAIR10
Match: AT5G49280.1 (AT5G49280.1 hydroxyproline-rich glycoprotein family protein)

HSP 1 Score: 77.0 bits (188), Expect = 1.1e-14
Identity = 71/154 (46.10%), Postives = 83/154 (53.90%), Query Frame = 1


Query: 10  TLFLFSLSKFSLSLA-----TVSARDQV-GCSMCSSCDNPCQLPPPPPPPPPPLVVDCPP 69
           T  L++LS   + L      TV+++D+V  C+MCSSCDNPC             V   PP
Sbjct: 3   TNHLYTLSTLVVMLLVSVTPTVTSKDEVVSCTMCSSCDNPCSP-----------VQSSPP 62

Query: 70  PPSPPPPPLPKPECPPPPSPPSC---DACVYPSP---------PPP----SSIQPYTPTD 129
           PPSPPPP  P   CPPPPSPPS     +  YP P         PPP         Y P  
Sbjct: 63  PPSPPPPSTPTTACPPPPSPPSSGGGSSYYYPPPSQSGGGSKYPPPYGGGGQGYYYPPPY 122

Query: 130 GGQYPGVAPPPPNPILPYFPYYYYTPP--SGSDR 140
            G YP   PPPPNPI+PYFP+YY+TPP  SGSDR
Sbjct: 123 SGNYP--TPPPPNPIVPYFPFYYHTPPPGSGSDR 143

[Close]

BLAST of CmaCh17G010540.1 vs. TAIR10
Match: AT4G16140.1 (AT4G16140.1 proline-rich family protein)

HSP 1 Score: 64.7 bits (156), Expect = 5.6e-11
Identity = 67/149 (44.97%), Postives = 77/149 (51.68%), Query Frame = 1


Query: 8   FLTLFLFSLSKFSLSLATVSARDQVG-CSMCSSCDNPCQLPPPPPPPPPPLVVDCPPPPS 67
           F T  LF    F     T+++  Q+  C+MC+SCDNPCQ  P PPPPP          PS
Sbjct: 4   FRTFHLFLFFFFFTFTTTLTSPSQIADCTMCTSCDNPCQPNPSPPPPPSN--------PS 63

Query: 68  PPPPPLPKPECPPPPS----------PPSCDACVYPSPPPPSSIQPY--TPTDGGQYPGV 127
           PPPP      CPPPPS          PP+  +  Y  PP  SS   Y   P  GG YP  
Sbjct: 64  PPPPSPTTTACPPPPSSSGGGPYYYYPPASQSGSYRPPPSSSSGGYYYPPPKSGGNYPYT 123

Query: 128 APPPPNPILPYFPYYYYTPP-----SGSD 139
             PPPNPI+PYFP+YYY PP     SGSD
Sbjct: 124 --PPPNPIVPYFPFYYYNPPPQSVMSGSD 142

[Close]

BLAST of CmaCh17G010540.1 vs. TAIR10
Match: AT3G06750.1 (AT3G06750.1 hydroxyproline-rich glycoprotein family protein)

HSP 1 Score: 55.1 bits (131), Expect = 4.4e-08
Identity = 56/130 (43.08%), Postives = 61/130 (46.92%), Query Frame = 1


Query: 20  SLSLATVSARDQVGCSMCSSCDNPCQLPPPPPPPPPPLVVDCPPPPSPPPPPLPKPECPP 79
           SL L   S  + V C+MCSSCDNPC                 P P S  PPP       P
Sbjct: 18  SLPLLVTSKDETVSCTMCSSCDNPCN----------------PVPSSYSPPP-------P 77

Query: 80  PPSPPSCDACVYPSPPPPSSIQ--PYTPTDGGQ-YPGV----------APPPPNPILPYF 137
           PPS        Y SPPPPSS     Y P  GG  Y G            PPPPNPI+PYF
Sbjct: 78  PPSSSGGGGSYYYSPPPPSSSGGVKYPPPYGGDGYGGYYPPPYYGNYGTPPPPNPIVPYF 124

[Close]

BLAST of CmaCh17G010540.1 vs. NCBI nr
Match: gi|700189757|gb|KGN44990.1| (hypothetical protein Csa_7G405965 [Cucumis sativus])

HSP 1 Score: 191.4 bits (485), Expect = 1.1e-45
Identity = 110/145 (75.86%), Postives = 122/145 (84.14%), Query Frame = 1


Query: 1   MADLTSIFLTLFLFSLSKFSL-SLATVSARDQVGCSMCSSCDNPCQLPPPPPPPPPPLVV 60
           MA+L SIFLT FL SL+KFSL S AT  A+DQVGCSMCS+CDNPCQLPPPPPPPP   VV
Sbjct: 1   MANLISIFLTFFLLSLTKFSLLSSATAVAKDQVGCSMCSTCDNPCQLPPPPPPPP---VV 60

Query: 61  DCPPPPSPPPPPLPKP-----ECPPPPSPPSCDACVYPSPPPPSSIQPYTPTDGGQYPGV 120
           +CPPPP  PPPP P P     +CPPPPSPPSCDACVYPSPPPPSS+QPY P+ GGQ+PG+
Sbjct: 61  ECPPPPPSPPPPSPPPPLPTSQCPPPPSPPSCDACVYPSPPPPSSVQPYPPSGGGQFPGI 120

Query: 121 APPPPNPILPYFPYYYYTPPSGSDR 140
           APPPPNPILPYFPYYYY+PPS S +
Sbjct: 121 APPPPNPILPYFPYYYYSPPSASPK 142

[Close]

BLAST of CmaCh17G010540.1 vs. NCBI nr
Match: gi|702500557|ref|XP_010038255.1| (PREDICTED: leucine-rich repeat extensin-like protein 3 [Eucalyptus grandis])

HSP 1 Score: 100.9 bits (250), Expect = 2.0e-18
Identity = 76/130 (58.46%), Postives = 87/130 (66.92%), Query Frame = 1


Query: 22  SLATVSARDQVGCSMCSSCDNPCQLPPPPPPPPPPLVVDCPPPPSPPPPP-LPKP----- 81
           +LA V +RDQV C+MC+ C+NPCQ  P PPPPPP   VDCPPPPSPPPPP LP P     
Sbjct: 44  TLAAVVSRDQVTCTMCAECENPCQPVPSPPPPPPE--VDCPPPPSPPPPPSLPPPSPPPP 103

Query: 82  --ECPPPPSPPSCDAC-------VYPSPPPPSSIQPYTPTDGGQYPGVAP--PPPNPILP 135
             ECPPPP PP+C AC       VY SPPPP++    +   GG Y G  P  PPPN ++P
Sbjct: 104 DVECPPPPMPPACSACESPVTGTVYASPPPPAT----SGGGGGGYGGYNPVQPPPNTMVP 163

[Close]

BLAST of CmaCh17G010540.1 vs. NCBI nr
Match: gi|802700677|ref|XP_012083797.1| (PREDICTED: leucine-rich repeat extensin-like protein 1 [Jatropha curcas])

HSP 1 Score: 96.3 bits (238), Expect = 4.9e-17
Identity = 75/149 (50.34%), Postives = 91/149 (61.07%), Query Frame = 1


Query: 4   LTSIFLTLFLFSLSKFSLSLATVSARDQVGCSMCSSCDNPCQLPPPPPPPPPPLVVDCPP 63
           L S+F+ LFL + S  + ++   S++DQ+ C+MCS+CDNPCQ  PPPPPPP   V +CPP
Sbjct: 7   LFSVFI-LFLVNFSLTASTITPTSSKDQISCTMCSACDNPCQPLPPPPPPP---VSECPP 66

Query: 64  PPSPPPPPLPKPECPPPPSPPSCDACVYPSPPPPSS-----IQPYTPTDGGQ----YPG- 123
           PPSPPPP +   +CPPPP  PS     Y  PPPPS        P  P + G     YP  
Sbjct: 67  PPSPPPPAVVS-DCPPPPVTPSSGTYYYSPPPPPSEPTYIYSSPPPPENSGDSGEFYPPP 126

Query: 124 -----VAPPPPNPILPYFPYYYYTPPSGS 138
                 APPPPNPILPYFP+YYY PP  S
Sbjct: 127 NYGNYAAPPPPNPILPYFPFYYYNPPPSS 150

[Close]

BLAST of CmaCh17G010540.1 vs. NCBI nr
Match: gi|848850707|ref|XP_012833992.1| (PREDICTED: leucine-rich repeat extensin-like protein 6 [Erythranthe guttata])

HSP 1 Score: 88.6 bits (218), Expect = 1.0e-14
Identity = 80/149 (53.69%), Postives = 90/149 (60.40%), Query Frame = 1


Query: 7   IFLTLFLFS---LSKFSLSLATVSA--RDQVGCSMCSSCDNPCQLPPPPPPPPPPLVVDC 66
           +F   FLF    L +FSL++ T+SA  +DQ+ C+MCSSCDNPCQ P   PPPPPP  V  
Sbjct: 4   LFFFFFLFISTFLCEFSLAMTTISAVTKDQIACTMCSSCDNPCQ-PIFSPPPPPPQQVPS 63

Query: 67  PPPPSPPPPPLPKPECPPPPSPPSCDACVYP-SPPPPSSIQPYTPT------DGGQYP-- 126
           PPPPSPPPP     +CPPPPSPPS    VY  SPPPP     Y P        GG Y   
Sbjct: 64  PPPPSPPPP--AGLDCPPPPSPPSGGGGVYYFSPPPPMQQSYYYPPPYGGGGGGGAYNPP 123

Query: 127 --GVAPPPPNPILPYFPYYYYTPPSGSDR 140
             G   PPPNPI+ YFPYYYY  P GS R
Sbjct: 124 SYGYLTPPPNPIVSYFPYYYYNTPPGSPR 149

[Close]

BLAST of CmaCh17G010540.1 vs. NCBI nr
Match: gi|1000974909|ref|XP_015572337.1| (PREDICTED: extensin-2 [Ricinus communis])

HSP 1 Score: 88.2 bits (217), Expect = 1.3e-14
Identity = 76/158 (48.10%), Postives = 91/158 (57.59%), Query Frame = 1


Query: 1   MADLTSIF----LTLFLF-SLSKFSLSLATVSARDQVGCSMCSSCDNPCQLPPPPPPPPP 60
           M +  S+F    L++FL  + S  + S  T  ++DQ+ C+MCS+CDNPCQ  P PPPP  
Sbjct: 5   MRNFNSLFSFSPLSIFLIINFSSVTSSRITAISKDQISCTMCSACDNPCQPLPSPPPP-- 64

Query: 61  PLVVDCPPPPSPPPPPLPK--PECPPPPSPPSCDACVYPSPPPPS------SIQPYTPTD 120
             V  CPPPP PP PP P    +CPPPP  PS  A  Y SPPPP+      S  P    D
Sbjct: 65  --VSTCPPPPPPPSPPPPAIVSDCPPPPVTPSSGAYYY-SPPPPAEPTYVYSSPPPPAND 124

Query: 121 GGQYPG------VAPPPPNPILPYFPYYYYTPPSGSDR 140
           GG YP         PPPPNPI+PYFP+YYY PP  S R
Sbjct: 125 GGFYPSPNYGSYQGPPPPNPIVPYFPFYYYNPPPSSFR 157

The following BLAST results are available for this feature:

BLAST of CmaCh17G010540.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmaCh17G010540.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K5N4_CUCSA	7.8e-46	75.86	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G405965 PE=4 SV=1	[more]
A0A067JWJ5_JATCU	3.4e-17	50.34	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13988 PE=4 SV=1	[more]
A0A022S3E3_ERYGU	7.2e-15	53.69	Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a014805mg PE=4 SV=1	[more]
V4S724_9ROSI	7.4e-12	49.65	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10005954mg PE=4 SV=1	[more]
A0A078EG12_BRANA	9.7e-12	48.05	BnaC09g02650D protein OS=Brassica napus GN=BnaC09g02650D PE=4 SV=1	[more]

BLAST of CmaCh17G010540.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G49280.1	1.1e-14	46.10	hydroxyproline-rich glycoprotein family protein	[more]
AT4G16140.1	5.6e-11	44.97	proline-rich family protein	[more]
AT3G06750.1	4.4e-08	43.08	hydroxyproline-rich glycoprotein family protein	[more]

BLAST of CmaCh17G010540.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700189757\|gb\|KGN44990.1\|	1.1e-45	75.86	hypothetical protein Csa_7G405965 [Cucumis sativus]	[more]
gi\|702500557\|ref\|XP_010038255.1\|	2.0e-18	58.46	PREDICTED: leucine-rich repeat extensin-like protein 3 [Eucalyptus grandis]	[more]
gi\|802700677\|ref\|XP_012083797.1\|	4.9e-17	50.34	PREDICTED: leucine-rich repeat extensin-like protein 1 [Jatropha curcas]	[more]
gi\|848850707\|ref\|XP_012833992.1\|	1.0e-14	53.69	PREDICTED: leucine-rich repeat extensin-like protein 6 [Erythranthe guttata]	[more]
gi\|1000974909\|ref\|XP_015572337.1\|	1.3e-14	48.10	PREDICTED: extensin-2 [Ricinus communis]	[more]

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmaCh17G010540	CmaCh17G010540	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmaCh17G010540.1	CmaCh17G010540.1-protein	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh17G010540.1.exon.1	CmaCh17G010540.1.exon.1	exon
CmaCh17G010540.1.exon.2	CmaCh17G010540.1.exon.2	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh17G010540.1.CDS.1	CmaCh17G010540.1.CDS.1	CDS
CmaCh17G010540.1.CDS.2	CmaCh17G010540.1.CDS.2	CDS