CmaCh17G010540 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh17G010540
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Unknown protein
Location	Cma_Chr17 : 7569598 .. 7570146 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGATCTCACCTCCATTTTCCTCACTCTCTTCCTCTTCTCCCTCTCCAAATTCTCCCTCTCTTTGGCCACCGTCTCGGCCAGGGATCAGGTTGGCTGTTCCATGTGCTCCAGTTGCGACAACCCATGTCAACTCCCGCCACCGCCTCCTCCTCCTCCTCCTCCGTTGGTTGTTGACTGCCCACCGCCTCCCTCACCGCCGCCACCGCCACTCCCCAAACCCGAATGCCCGCCGCCTCCCTCGCCCCCTTCGTGCGATGCATGCGTCTACCCTTCACCGCCGCCACCGTCCTCCATCCAGCCGTACACTCCAACCGACGGTGGGCAATATCCCGGCGTTGCTCCGCCGCCGCCGAACCCAATTTTACCGTATTTTCCTTACTATTATTACACTCCGCCTTCTGGGTCTGGTAAATCCGTTCCATTTTCATGGAAGTTCTTGCCTTTGTTGTTCGTTCTTCGACTCTAAAAATGTTCCCGATTTGTTTACGACGCCATTGAAGATCGGGAATGGGCGGCGGAGGAGATCAAAAGAAGGGTAGTATAA

mRNA sequence

ATGGCGGATCTCACCTCCATTTTCCTCACTCTCTTCCTCTTCTCCCTCTCCAAATTCTCCCTCTCTTTGGCCACCGTCTCGGCCAGGGATCAGGTTGGCTGTTCCATGTGCTCCAGTTGCGACAACCCATGTCAACTCCCGCCACCGCCTCCTCCTCCTCCTCCTCCGTTGGTTGTTGACTGCCCACCGCCTCCCTCACCGCCGCCACCGCCACTCCCCAAACCCGAATGCCCGCCGCCTCCCTCGCCCCCTTCGTGCGATGCATGCGTCTACCCTTCACCGCCGCCACCGTCCTCCATCCAGCCGTACACTCCAACCGACGGTGGGCAATATCCCGGCGTTGCTCCGCCGCCGCCGAACCCAATTTTACCGTATTTTCCTTACTATTATTACACTCCGCCTTCTGGGTCTGATCGGGAATGGGCGGCGGAGGAGATCAAAAGAAGGGTAGTATAA

Coding sequence (CDS)

ATGGCGGATCTCACCTCCATTTTCCTCACTCTCTTCCTCTTCTCCCTCTCCAAATTCTCCCTCTCTTTGGCCACCGTCTCGGCCAGGGATCAGGTTGGCTGTTCCATGTGCTCCAGTTGCGACAACCCATGTCAACTCCCGCCACCGCCTCCTCCTCCTCCTCCTCCGTTGGTTGTTGACTGCCCACCGCCTCCCTCACCGCCGCCACCGCCACTCCCCAAACCCGAATGCCCGCCGCCTCCCTCGCCCCCTTCGTGCGATGCATGCGTCTACCCTTCACCGCCGCCACCGTCCTCCATCCAGCCGTACACTCCAACCGACGGTGGGCAATATCCCGGCGTTGCTCCGCCGCCGCCGAACCCAATTTTACCGTATTTTCCTTACTATTATTACACTCCGCCTTCTGGGTCTGATCGGGAATGGGCGGCGGAGGAGATCAAAAGAAGGGTAGTATAA

Protein sequence

MADLTSIFLTLFLFSLSKFSLSLATVSARDQVGCSMCSSCDNPCQLPPPPPPPPPPLVVDCPPPPSPPPPPLPKPECPPPPSPPSCDACVYPSPPPPSSIQPYTPTDGGQYPGVAPPPPNPILPYFPYYYYTPPSGSDREWAAEEIKRRVV

Homology

[Close]

BLAST of CmaCh17G010540 vs. TrEMBL
Match: A0A0A0K5N4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G405965 PE=4 SV=1)

HSP 1 Score: 191.4 bits (485), Expect = 7.8e-46
Identity = 110/145 (75.86%), Postives = 122/145 (84.14%), Query Frame = 1


Query: 1   MADLTSIFLTLFLFSLSKFSL-SLATVSARDQVGCSMCSSCDNPCQLPPPPPPPPPPLVV 60
           MA+L SIFLT FL SL+KFSL S AT  A+DQVGCSMCS+CDNPCQLPPPPPPPP   VV
Sbjct: 1   MANLISIFLTFFLLSLTKFSLLSSATAVAKDQVGCSMCSTCDNPCQLPPPPPPPP---VV 60

Query: 61  DCPPPPSPPPPPLPKP-----ECPPPPSPPSCDACVYPSPPPPSSIQPYTPTDGGQYPGV 120
           +CPPPP  PPPP P P     +CPPPPSPPSCDACVYPSPPPPSS+QPY P+ GGQ+PG+
Sbjct: 61  ECPPPPPSPPPPSPPPPLPTSQCPPPPSPPSCDACVYPSPPPPSSVQPYPPSGGGQFPGI 120

Query: 121 APPPPNPILPYFPYYYYTPPSGSDR 140
           APPPPNPILPYFPYYYY+PPS S +
Sbjct: 121 APPPPNPILPYFPYYYYSPPSASPK 142

[Close]

BLAST of CmaCh17G010540 vs. TrEMBL
Match: A0A067JWJ5_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13988 PE=4 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 3.4e-17
Identity = 75/149 (50.34%), Postives = 91/149 (61.07%), Query Frame = 1


Query: 4   LTSIFLTLFLFSLSKFSLSLATVSARDQVGCSMCSSCDNPCQLPPPPPPPPPPLVVDCPP 63
           L S+F+ LFL + S  + ++   S++DQ+ C+MCS+CDNPCQ  PPPPPPP   V +CPP
Sbjct: 7   LFSVFI-LFLVNFSLTASTITPTSSKDQISCTMCSACDNPCQPLPPPPPPP---VSECPP 66

Query: 64  PPSPPPPPLPKPECPPPPSPPSCDACVYPSPPPPSS-----IQPYTPTDGGQ----YPG- 123
           PPSPPPP +   +CPPPP  PS     Y  PPPPS        P  P + G     YP  
Sbjct: 67  PPSPPPPAVVS-DCPPPPVTPSSGTYYYSPPPPPSEPTYIYSSPPPPENSGDSGEFYPPP 126

Query: 124 -----VAPPPPNPILPYFPYYYYTPPSGS 138
                 APPPPNPILPYFP+YYY PP  S
Sbjct: 127 NYGNYAAPPPPNPILPYFPFYYYNPPPSS 150

[Close]

BLAST of CmaCh17G010540 vs. TrEMBL
Match: A0A022S3E3_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a014805mg PE=4 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 7.2e-15
Identity = 80/149 (53.69%), Postives = 90/149 (60.40%), Query Frame = 1


Query: 7   IFLTLFLFS---LSKFSLSLATVSA--RDQVGCSMCSSCDNPCQLPPPPPPPPPPLVVDC 66
           +F   FLF    L +FSL++ T+SA  +DQ+ C+MCSSCDNPCQ P   PPPPPP  V  
Sbjct: 4   LFFFFFLFISTFLCEFSLAMTTISAVTKDQIACTMCSSCDNPCQ-PIFSPPPPPPQQVPS 63

Query: 67  PPPPSPPPPPLPKPECPPPPSPPSCDACVYP-SPPPPSSIQPYTPT------DGGQYP-- 126
           PPPPSPPPP     +CPPPPSPPS    VY  SPPPP     Y P        GG Y   
Sbjct: 64  PPPPSPPPP--AGLDCPPPPSPPSGGGGVYYFSPPPPMQQSYYYPPPYGGGGGGGAYNPP 123

Query: 127 --GVAPPPPNPILPYFPYYYYTPPSGSDR 140
             G   PPPNPI+ YFPYYYY  P GS R
Sbjct: 124 SYGYLTPPPNPIVSYFPYYYYNTPPGSPR 149

[Close]

BLAST of CmaCh17G010540 vs. TrEMBL
Match: V4S724_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10005954mg PE=4 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 7.4e-12
Identity = 70/141 (49.65%), Postives = 78/141 (55.32%), Query Frame = 1


Query: 25  TVSARDQVGCSMCSSCDNPCQLPPPPPPPPPPLVVDCPPPPSPPPPPLPKPECPPPPSPP 84
           T +A+ Q+ C+MCSSCDNPCQ  P PPPP P      PPPPSPPP     P CPPPPSPP
Sbjct: 34  TTTAKYQIECTMCSSCDNPCQPDPSPPPPSP-----SPPPPSPPPAS-SSPNCPPPPSPP 93

Query: 85  SCD-----ACVYPSPPPPSS-----IQPYTPTDG------------------GQYPGVAP 138
           S          Y SPPPPSS       P  P++G                  G YP   P
Sbjct: 94  SSSGGGSGGSYYYSPPPPSSPSSSYSSPPPPSNGNGNGNGGIGGLYFPPPNRGNYP--TP 153

[Close]

BLAST of CmaCh17G010540 vs. TrEMBL
Match: A0A078EG12_BRANA (BnaC09g02650D protein OS=Brassica napus GN=BnaC09g02650D PE=4 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 9.7e-12
Identity = 74/154 (48.05%), Postives = 83/154 (53.90%), Query Frame = 1


Query: 8   FLTLFLFSLSKFSLSLATVSARDQVGCSMCSSCDNPCQLPPPPPPPPPPLVVDCPPPPSP 67
           F TL +  L   SL+L   S  + V C+MCSSCDNPC   P  PPPPPP          P
Sbjct: 9   FSTLVVILL--LSLTLTVTSTDEVVSCTMCSSCDNPCNPVPSYPPPPPP--------SRP 68

Query: 68  PPPPLPKPECPPPPSPPSCD---ACVYPSP--------PPPSSIQPYTPT--DGGQYPGV 127
           PP P     CPPPPSPPS     +  YP P        PPP     Y P   DGG YP  
Sbjct: 69  PPSPSTTTACPPPPSPPSSGGGGSYYYPPPSQSGGGKYPPPYGDGKYPPPNGDGGNYP-- 128

Query: 128 APPPPNPILPYFPYYYYTPP--SGSDREWAAEEI 147
            PPPPNPI+PYFP+YY+TPP  SGSDR   +  I
Sbjct: 129 TPPPPNPIVPYFPFYYHTPPPGSGSDRFMGSSSI 150

[Close]

BLAST of CmaCh17G010540 vs. TAIR10
Match: AT5G49280.1 (AT5G49280.1 hydroxyproline-rich glycoprotein family protein)

HSP 1 Score: 77.0 bits (188), Expect = 1.1e-14
Identity = 71/154 (46.10%), Postives = 83/154 (53.90%), Query Frame = 1


Query: 10  TLFLFSLSKFSLSLA-----TVSARDQV-GCSMCSSCDNPCQLPPPPPPPPPPLVVDCPP 69
           T  L++LS   + L      TV+++D+V  C+MCSSCDNPC             V   PP
Sbjct: 3   TNHLYTLSTLVVMLLVSVTPTVTSKDEVVSCTMCSSCDNPCSP-----------VQSSPP 62

Query: 70  PPSPPPPPLPKPECPPPPSPPSC---DACVYPSP---------PPP----SSIQPYTPTD 129
           PPSPPPP  P   CPPPPSPPS     +  YP P         PPP         Y P  
Sbjct: 63  PPSPPPPSTPTTACPPPPSPPSSGGGSSYYYPPPSQSGGGSKYPPPYGGGGQGYYYPPPY 122

Query: 130 GGQYPGVAPPPPNPILPYFPYYYYTPP--SGSDR 140
            G YP   PPPPNPI+PYFP+YY+TPP  SGSDR
Sbjct: 123 SGNYP--TPPPPNPIVPYFPFYYHTPPPGSGSDR 143

[Close]

BLAST of CmaCh17G010540 vs. TAIR10
Match: AT4G16140.1 (AT4G16140.1 proline-rich family protein)

HSP 1 Score: 64.7 bits (156), Expect = 5.6e-11
Identity = 67/149 (44.97%), Postives = 77/149 (51.68%), Query Frame = 1


Query: 8   FLTLFLFSLSKFSLSLATVSARDQVG-CSMCSSCDNPCQLPPPPPPPPPPLVVDCPPPPS 67
           F T  LF    F     T+++  Q+  C+MC+SCDNPCQ  P PPPPP          PS
Sbjct: 4   FRTFHLFLFFFFFTFTTTLTSPSQIADCTMCTSCDNPCQPNPSPPPPPSN--------PS 63

Query: 68  PPPPPLPKPECPPPPS----------PPSCDACVYPSPPPPSSIQPY--TPTDGGQYPGV 127
           PPPP      CPPPPS          PP+  +  Y  PP  SS   Y   P  GG YP  
Sbjct: 64  PPPPSPTTTACPPPPSSSGGGPYYYYPPASQSGSYRPPPSSSSGGYYYPPPKSGGNYPYT 123

Query: 128 APPPPNPILPYFPYYYYTPP-----SGSD 139
             PPPNPI+PYFP+YYY PP     SGSD
Sbjct: 124 --PPPNPIVPYFPFYYYNPPPQSVMSGSD 142

[Close]

BLAST of CmaCh17G010540 vs. TAIR10
Match: AT3G06750.1 (AT3G06750.1 hydroxyproline-rich glycoprotein family protein)

HSP 1 Score: 55.1 bits (131), Expect = 4.4e-08
Identity = 56/130 (43.08%), Postives = 61/130 (46.92%), Query Frame = 1


Query: 20  SLSLATVSARDQVGCSMCSSCDNPCQLPPPPPPPPPPLVVDCPPPPSPPPPPLPKPECPP 79
           SL L   S  + V C+MCSSCDNPC                 P P S  PPP       P
Sbjct: 18  SLPLLVTSKDETVSCTMCSSCDNPCN----------------PVPSSYSPPP-------P 77

Query: 80  PPSPPSCDACVYPSPPPPSSIQ--PYTPTDGGQ-YPGV----------APPPPNPILPYF 137
           PPS        Y SPPPPSS     Y P  GG  Y G            PPPPNPI+PYF
Sbjct: 78  PPSSSGGGGSYYYSPPPPSSSGGVKYPPPYGGDGYGGYYPPPYYGNYGTPPPPNPIVPYF 124

[Close]

BLAST of CmaCh17G010540 vs. NCBI nr
Match: gi|700189757|gb|KGN44990.1| (hypothetical protein Csa_7G405965 [Cucumis sativus])

HSP 1 Score: 191.4 bits (485), Expect = 1.1e-45
Identity = 110/145 (75.86%), Postives = 122/145 (84.14%), Query Frame = 1


Query: 1   MADLTSIFLTLFLFSLSKFSL-SLATVSARDQVGCSMCSSCDNPCQLPPPPPPPPPPLVV 60
           MA+L SIFLT FL SL+KFSL S AT  A+DQVGCSMCS+CDNPCQLPPPPPPPP   VV
Sbjct: 1   MANLISIFLTFFLLSLTKFSLLSSATAVAKDQVGCSMCSTCDNPCQLPPPPPPPP---VV 60

Query: 61  DCPPPPSPPPPPLPKP-----ECPPPPSPPSCDACVYPSPPPPSSIQPYTPTDGGQYPGV 120
           +CPPPP  PPPP P P     +CPPPPSPPSCDACVYPSPPPPSS+QPY P+ GGQ+PG+
Sbjct: 61  ECPPPPPSPPPPSPPPPLPTSQCPPPPSPPSCDACVYPSPPPPSSVQPYPPSGGGQFPGI 120

Query: 121 APPPPNPILPYFPYYYYTPPSGSDR 140
           APPPPNPILPYFPYYYY+PPS S +
Sbjct: 121 APPPPNPILPYFPYYYYSPPSASPK 142

[Close]

BLAST of CmaCh17G010540 vs. NCBI nr
Match: gi|702500557|ref|XP_010038255.1| (PREDICTED: leucine-rich repeat extensin-like protein 3 [Eucalyptus grandis])

HSP 1 Score: 100.9 bits (250), Expect = 2.0e-18
Identity = 76/130 (58.46%), Postives = 87/130 (66.92%), Query Frame = 1


Query: 22  SLATVSARDQVGCSMCSSCDNPCQLPPPPPPPPPPLVVDCPPPPSPPPPP-LPKP----- 81
           +LA V +RDQV C+MC+ C+NPCQ  P PPPPPP   VDCPPPPSPPPPP LP P     
Sbjct: 44  TLAAVVSRDQVTCTMCAECENPCQPVPSPPPPPPE--VDCPPPPSPPPPPSLPPPSPPPP 103

Query: 82  --ECPPPPSPPSCDAC-------VYPSPPPPSSIQPYTPTDGGQYPGVAP--PPPNPILP 135
             ECPPPP PP+C AC       VY SPPPP++    +   GG Y G  P  PPPN ++P
Sbjct: 104 DVECPPPPMPPACSACESPVTGTVYASPPPPAT----SGGGGGGYGGYNPVQPPPNTMVP 163

[Close]

BLAST of CmaCh17G010540 vs. NCBI nr
Match: gi|802700677|ref|XP_012083797.1| (PREDICTED: leucine-rich repeat extensin-like protein 1 [Jatropha curcas])

HSP 1 Score: 96.3 bits (238), Expect = 4.9e-17
Identity = 75/149 (50.34%), Postives = 91/149 (61.07%), Query Frame = 1


Query: 4   LTSIFLTLFLFSLSKFSLSLATVSARDQVGCSMCSSCDNPCQLPPPPPPPPPPLVVDCPP 63
           L S+F+ LFL + S  + ++   S++DQ+ C+MCS+CDNPCQ  PPPPPPP   V +CPP
Sbjct: 7   LFSVFI-LFLVNFSLTASTITPTSSKDQISCTMCSACDNPCQPLPPPPPPP---VSECPP 66

Query: 64  PPSPPPPPLPKPECPPPPSPPSCDACVYPSPPPPSS-----IQPYTPTDGGQ----YPG- 123
           PPSPPPP +   +CPPPP  PS     Y  PPPPS        P  P + G     YP  
Sbjct: 67  PPSPPPPAVVS-DCPPPPVTPSSGTYYYSPPPPPSEPTYIYSSPPPPENSGDSGEFYPPP 126

Query: 124 -----VAPPPPNPILPYFPYYYYTPPSGS 138
                 APPPPNPILPYFP+YYY PP  S
Sbjct: 127 NYGNYAAPPPPNPILPYFPFYYYNPPPSS 150

[Close]

BLAST of CmaCh17G010540 vs. NCBI nr
Match: gi|848850707|ref|XP_012833992.1| (PREDICTED: leucine-rich repeat extensin-like protein 6 [Erythranthe guttata])

HSP 1 Score: 88.6 bits (218), Expect = 1.0e-14
Identity = 80/149 (53.69%), Postives = 90/149 (60.40%), Query Frame = 1


Query: 7   IFLTLFLFS---LSKFSLSLATVSA--RDQVGCSMCSSCDNPCQLPPPPPPPPPPLVVDC 66
           +F   FLF    L +FSL++ T+SA  +DQ+ C+MCSSCDNPCQ P   PPPPPP  V  
Sbjct: 4   LFFFFFLFISTFLCEFSLAMTTISAVTKDQIACTMCSSCDNPCQ-PIFSPPPPPPQQVPS 63

Query: 67  PPPPSPPPPPLPKPECPPPPSPPSCDACVYP-SPPPPSSIQPYTPT------DGGQYP-- 126
           PPPPSPPPP     +CPPPPSPPS    VY  SPPPP     Y P        GG Y   
Sbjct: 64  PPPPSPPPP--AGLDCPPPPSPPSGGGGVYYFSPPPPMQQSYYYPPPYGGGGGGGAYNPP 123

Query: 127 --GVAPPPPNPILPYFPYYYYTPPSGSDR 140
             G   PPPNPI+ YFPYYYY  P GS R
Sbjct: 124 SYGYLTPPPNPIVSYFPYYYYNTPPGSPR 149

[Close]

BLAST of CmaCh17G010540 vs. NCBI nr
Match: gi|1000974909|ref|XP_015572337.1| (PREDICTED: extensin-2 [Ricinus communis])

HSP 1 Score: 88.2 bits (217), Expect = 1.3e-14
Identity = 76/158 (48.10%), Postives = 91/158 (57.59%), Query Frame = 1


Query: 1   MADLTSIF----LTLFLF-SLSKFSLSLATVSARDQVGCSMCSSCDNPCQLPPPPPPPPP 60
           M +  S+F    L++FL  + S  + S  T  ++DQ+ C+MCS+CDNPCQ  P PPPP  
Sbjct: 5   MRNFNSLFSFSPLSIFLIINFSSVTSSRITAISKDQISCTMCSACDNPCQPLPSPPPP-- 64

Query: 61  PLVVDCPPPPSPPPPPLPK--PECPPPPSPPSCDACVYPSPPPPS------SIQPYTPTD 120
             V  CPPPP PP PP P    +CPPPP  PS  A  Y SPPPP+      S  P    D
Sbjct: 65  --VSTCPPPPPPPSPPPPAIVSDCPPPPVTPSSGAYYY-SPPPPAEPTYVYSSPPPPAND 124

Query: 121 GGQYPG------VAPPPPNPILPYFPYYYYTPPSGSDR 140
           GG YP         PPPPNPI+PYFP+YYY PP  S R
Sbjct: 125 GGFYPSPNYGSYQGPPPPNPIVPYFPFYYYNPPPSSFR 157

The following BLAST results are available for this feature:

BLAST of CmaCh17G010540 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmaCh17G010540 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K5N4_CUCSA	7.8e-46	75.86	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G405965 PE=4 SV=1	[more]
A0A067JWJ5_JATCU	3.4e-17	50.34	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13988 PE=4 SV=1	[more]
A0A022S3E3_ERYGU	7.2e-15	53.69	Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a014805mg PE=4 SV=1	[more]
V4S724_9ROSI	7.4e-12	49.65	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10005954mg PE=4 SV=1	[more]
A0A078EG12_BRANA	9.7e-12	48.05	BnaC09g02650D protein OS=Brassica napus GN=BnaC09g02650D PE=4 SV=1	[more]

BLAST of CmaCh17G010540 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G49280.1	1.1e-14	46.10	hydroxyproline-rich glycoprotein family protein	[more]
AT4G16140.1	5.6e-11	44.97	proline-rich family protein	[more]
AT3G06750.1	4.4e-08	43.08	hydroxyproline-rich glycoprotein family protein	[more]

BLAST of CmaCh17G010540 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700189757\|gb\|KGN44990.1\|	1.1e-45	75.86	hypothetical protein Csa_7G405965 [Cucumis sativus]	[more]
gi\|702500557\|ref\|XP_010038255.1\|	2.0e-18	58.46	PREDICTED: leucine-rich repeat extensin-like protein 3 [Eucalyptus grandis]	[more]
gi\|802700677\|ref\|XP_012083797.1\|	4.9e-17	50.34	PREDICTED: leucine-rich repeat extensin-like protein 1 [Jatropha curcas]	[more]
gi\|848850707\|ref\|XP_012833992.1\|	1.0e-14	53.69	PREDICTED: leucine-rich repeat extensin-like protein 6 [Erythranthe guttata]	[more]
gi\|1000974909\|ref\|XP_015572337.1\|	1.3e-14	48.10	PREDICTED: extensin-2 [Ricinus communis]	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh17G010540.1	CmaCh17G010540.1	mRNA

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh17G010540	CsaV3_7G029730	Cucumber (Chinese Long) v3	cmacucB0462

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh17G010540	Cucumber (Gy14) v2	cgybcmaB925
CmaCh17G010540	Melon (DHL92) v3.6.1	cmamedB373
CmaCh17G010540	Melon (DHL92) v3.6.1	cmamedB401
CmaCh17G010540	Silver-seed gourd	carcmaB0142
CmaCh17G010540	Silver-seed gourd	carcmaB1058
CmaCh17G010540	Silver-seed gourd	carcmaB1133
CmaCh17G010540	Cucumber (Chinese Long) v3	cmacucB0437
CmaCh17G010540	Watermelon (97103) v2	cmawmbB360
CmaCh17G010540	Watermelon (97103) v2	cmawmbB386
CmaCh17G010540	Wax gourd	cmawgoB0454
CmaCh17G010540	Wax gourd	cmawgoB0494
CmaCh17G010540	Cucurbita maxima (Rimu)	cmacmaB250
CmaCh17G010540	Cucurbita maxima (Rimu)	cmacmaB360
CmaCh17G010540	Cucurbita maxima (Rimu)	cmacmaB382
CmaCh17G010540	Cucumber (Gy14) v1	cgycmaB0198
CmaCh17G010540	Cucumber (Gy14) v1	cgycmaB0606
CmaCh17G010540	Cucurbita moschata (Rifu)	cmacmoB351
CmaCh17G010540	Cucurbita moschata (Rifu)	cmacmoB353
CmaCh17G010540	Cucurbita moschata (Rifu)	cmacmoB354
CmaCh17G010540	Cucurbita moschata (Rifu)	cmacmoB374
CmaCh17G010540	Wild cucumber (PI 183967)	cmacpiB369
CmaCh17G010540	Wild cucumber (PI 183967)	cmacpiB392
CmaCh17G010540	Cucumber (Chinese Long) v2	cmacuB365
CmaCh17G010540	Cucumber (Chinese Long) v2	cmacuB388
CmaCh17G010540	Melon (DHL92) v3.5.1	cmameB320
CmaCh17G010540	Melon (DHL92) v3.5.1	cmameB347
CmaCh17G010540	Watermelon (Charleston Gray)	cmawcgB306
CmaCh17G010540	Watermelon (Charleston Gray)	cmawcgB314
CmaCh17G010540	Watermelon (97103) v1	cmawmB328
CmaCh17G010540	Watermelon (97103) v1	cmawmB336
CmaCh17G010540	Cucurbita pepo (Zucchini)	cmacpeB371
CmaCh17G010540	Cucurbita pepo (Zucchini)	cmacpeB376
CmaCh17G010540	Bottle gourd (USVL1VR-Ls)	cmalsiB348
CmaCh17G010540	Bottle gourd (USVL1VR-Ls)	cmalsiB351