CmaCh17G000500.1 (mRNA) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: CDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGTAAGCCTAGTAGCATTATTGATTTCAACCCTATGGTCGCTATTAACTTCGAGATATTATAATTCTTTTGAGTTTTCTTGATAATCAAATGTCGTTGGATCAGGTGGCACAACTTAGAATCACATACTGTACAAAATGCTAAATTTTATAGCCTTCACAGATAATTTCATACAGATCTGTATGTGCATCTTTGTTTATGCTTCTACACATCAATTATACCTTACAAACACTTCATTTTCCTTTAGAATGCCGAGACGCTCTCCTAATCTTCCTTCGGAATGGCCTACACGCCTCAATGCTGAGACCAACGGCTGCAGCTAGTGCCATGAAAATGGCAGCATCCTCTGTACATGTCACATGTCGCATGGCGAGTTGCACCATTGGCTTACTGCTCTTTCCTTCCCCTTGTACTCTACAACTCATGACGAAACCTCCGACCAGTTGGCCTAATGCTGCAAAGTCTCCGCTGCTCTGCGGGCTTGGTATTGGAACTGTTGCTGCTCGTAACTGTTTGTCAGTGTCTATGAAGAACTCCCCACCTCTCTCAGCATTGATATGGATCTCAGACATGAGAAGTTCCCCTCCCTCTTGAGCTTCGGAGAGAAGGTGAAAGCGACAGCAGACAGTGTCTCTAATTCCTCGCTCGCGCCATGCCTCGAGCTTTCCCCATGGCTGCCAACTTTCAGGTATGCAAACATCAGGACGAACAATCAGCCAAGACCCGGGGTTTGACCGGGCAACCCAATCGCAACCTGCTGATGGCACAAAGGGAGTAGTTATGAAGGCTGCTGCAACAGCCGAGCCAGAAAGATCATGTATCTTCACCTTCCAGCCTTTTCTTTCTCTCCGCTCGACCTTGAGGTCTGAGCCATCACCAGAACCTAACCAATCTGAGCCATCACCAGAACCTGACCCTGACCAATAG ATGGAATGCCGAGACGCTCTCCTAATCTTCCTTCGGAATGGCCTACACGCCTCAATGCTGAGACCAACGGCTGCAGCTAGTGCCATGAAAATGGCAGCATCCTCTGTACATGTCACATGTCGCATGGCGAGTTGCACCATTGGCTTACTGCTCTTTCCTTCCCCTTGTACTCTACAACTCATGACGAAACCTCCGACCAGTTGGCCTAATGCTGCAAAGTCTCCGCTGCTCTGCGGGCTTGGTATTGGAACTGTTGCTGCTCAACTCCCCACCTCTCTCAGCATTGATATGGATCTCAGACATGAGAAGTTCCCCTCCCTCTTGAGCTTCGGAGAGAAGGTGAAAGCGACAGCAGACAGTGTCTCTAATTCCTCGCTCGCGCCATGCCTCGAGCTTTCCCCATGGCTGCCAACTTTCAGCCAAGACCCGGGGTTTGACCGGGCAACCCAATCGCAACCTGCTGATGGCACAAAGGGAGTAGTTATGAAGGCTGCTGCAACAGCCGAGCCAGAAAGATCATGTATCTTCACCTTCCAGCCTTTTCTTTCTCTCCGCTCGACCTTGAGGTCTGAGCCATCACCAGAACCTAACCAATCTGAGCCATCACCAGAACCTGACCCTGACCAATAG ATGGAATGCCGAGACGCTCTCCTAATCTTCCTTCGGAATGGCCTACACGCCTCAATGCTGAGACCAACGGCTGCAGCTAGTGCCATGAAAATGGCAGCATCCTCTGTACATGTCACATGTCGCATGGCGAGTTGCACCATTGGCTTACTGCTCTTTCCTTCCCCTTGTACTCTACAACTCATGACGAAACCTCCGACCAGTTGGCCTAATGCTGCAAAGTCTCCGCTGCTCTGCGGGCTTGGTATTGGAACTGTTGCTGCTCAACTCCCCACCTCTCTCAGCATTGATATGGATCTCAGACATGAGAAGTTCCCCTCCCTCTTGAGCTTCGGAGAGAAGGTGAAAGCGACAGCAGACAGTGTCTCTAATTCCTCGCTCGCGCCATGCCTCGAGCTTTCCCCATGGCTGCCAACTTTCAGCCAAGACCCGGGGTTTGACCGGGCAACCCAATCGCAACCTGCTGATGGCACAAAGGGAGTAGTTATGAAGGCTGCTGCAACAGCCGAGCCAGAAAGATCATGTATCTTCACCTTCCAGCCTTTTCTTTCTCTCCGCTCGACCTTGAGGTCTGAGCCATCACCAGAACCTAACCAATCTGAGCCATCACCAGAACCTGACCCTGACCAATAG MECRDALLIFLRNGLHASMLRPTAAASAMKMAASSVHVTCRMASCTIGLLLFPSPCTLQLMTKPPTSWPNAAKSPLLCGLGIGTVAAQLPTSLSIDMDLRHEKFPSLLSFGEKVKATADSVSNSSLAPCLELSPWLPTFSQDPGFDRATQSQPADGTKGVVMKAAATAEPERSCIFTFQPFLSLRSTLRSEPSPEPNQSEPSPEPDPDQ
BLAST of CmaCh17G000500.1 vs. TrEMBL
Match: A0A0A9D7Z2_ARUDO (Uncharacterized protein OS=Arundo donax PE=4 SV=1) HSP 1 Score: 103.2 bits (256), Expect = 3.9e-19 Identity = 71/189 (37.57%), Postives = 94/189 (49.74%), Query Frame = 1
BLAST of CmaCh17G000500.1 vs. TrEMBL
Match: A0A0A9PA10_ARUDO (Uncharacterized protein OS=Arundo donax PE=4 SV=1) HSP 1 Score: 67.4 bits (163), Expect = 2.4e-08 Identity = 39/64 (60.94%), Postives = 43/64 (67.19%), Query Frame = 1
BLAST of CmaCh17G000500.1 vs. TrEMBL
Match: A0A103YNA3_CYNCS (Uncharacterized protein OS=Cynara cardunculus var. scolymus GN=Ccrd_009322 PE=4 SV=1) HSP 1 Score: 63.5 bits (153), Expect = 3.4e-07 Identity = 34/61 (55.74%), Postives = 43/61 (70.49%), Query Frame = 1
BLAST of CmaCh17G000500.1 vs. TrEMBL
Match: A0A0A9EFU5_ARUDO (Uncharacterized protein OS=Arundo donax PE=4 SV=1) HSP 1 Score: 61.2 bits (147), Expect = 1.7e-06 Identity = 34/59 (57.63%), Postives = 38/59 (64.41%), Query Frame = 1
BLAST of CmaCh17G000500.1 vs. TrEMBL
Match: A0A0A9GDF0_ARUDO (Uncharacterized protein OS=Arundo donax PE=4 SV=1) HSP 1 Score: 60.5 bits (145), Expect = 2.9e-06 Identity = 35/62 (56.45%), Postives = 39/62 (62.90%), Query Frame = 1
BLAST of CmaCh17G000500.1 vs. NCBI nr
Match: gi|976929401|gb|KVI12251.1| (hypothetical protein Ccrd_009322 [Cynara cardunculus var. scolymus]) HSP 1 Score: 63.5 bits (153), Expect = 4.9e-07 Identity = 34/61 (55.74%), Postives = 43/61 (70.49%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
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