CmaCh16G008240.1 (mRNA) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh16G008240.1
Type	mRNA
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	(+)-delta-cadinene synthase
Location	Cma_Chr16 : 4579109 .. 4579609 (+)
Sequence length	414

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTGACATAGTAACAAATGAGATAATTGAATGGTTTTCTAGAAGACCTAAAGTTATAAAAACCGCAACAATAATTGGCAGACTCATGGATGACCTCGTTTCCCACAAGGTATATATTGTTTACTATCCTTAGAGAGCAGCACAAACAAAGTTGAATTTTTTAAAGTAAACTGCATTTACTTGTTTTCTATTTCAGTTTGAGCAACAAAGGGAACATGTTGCTTCGGGGGTTCAATGTTACATGGAACAATATGGTTGTTTAGAGGAAGAAGCTTGCGTTGAACTTCATAAACAAGTGGTTGACGCATGGAAGGACATAAATGAAGCATGTCTTCATCCAATCGATGTTCCAATGCCTATTCTTATGCGAGTTGTGAACGTTTCTAGATTTATTGAAGTGCTTTATTTTGATAAGGATGGATATACAAATGCAAATGGGCGAACAAAGTTTCTTATCAAATCTCTTCTCGTTAACCCAATGTTGATGAAAATATTTTAG

mRNA sequence

ATGGGTGACATAGTAACAAATGAGATAATTGAATGGTTTTCTAGAAGACCTAAAGTTATAAAAACCGCAACAATAATTGGCAGACTCATGGATGACCTCGTTTCCCACAAGTTTGAGCAACAAAGGGAACATGTTGCTTCGGGGGTTCAATGTTACATGGAACAATATGGTTGTTTAGAGGAAGAAGCTTGCGTTGAACTTCATAAACAAGTGGTTGACGCATGGAAGGACATAAATGAAGCATGTCTTCATCCAATCGATGTTCCAATGCCTATTCTTATGCGAGTTGTGAACGTTTCTAGATTTATTGAAGTGCTTTATTTTGATAAGGATGGATATACAAATGCAAATGGGCGAACAAAGTTTCTTATCAAATCTCTTCTCGTTAACCCAATGTTGATGAAAATATTTTAG

Coding sequence (CDS)

ATGGGTGACATAGTAACAAATGAGATAATTGAATGGTTTTCTAGAAGACCTAAAGTTATAAAAACCGCAACAATAATTGGCAGACTCATGGATGACCTCGTTTCCCACAAGTTTGAGCAACAAAGGGAACATGTTGCTTCGGGGGTTCAATGTTACATGGAACAATATGGTTGTTTAGAGGAAGAAGCTTGCGTTGAACTTCATAAACAAGTGGTTGACGCATGGAAGGACATAAATGAAGCATGTCTTCATCCAATCGATGTTCCAATGCCTATTCTTATGCGAGTTGTGAACGTTTCTAGATTTATTGAAGTGCTTTATTTTGATAAGGATGGATATACAAATGCAAATGGGCGAACAAAGTTTCTTATCAAATCTCTTCTCGTTAACCCAATGTTGATGAAAATATTTTAG

Protein sequence

MGDIVTNEIIEWFSRRPKVIKTATIIGRLMDDLVSHKFEQQREHVASGVQCYMEQYGCLEEEACVELHKQVVDAWKDINEACLHPIDVPMPILMRVVNVSRFIEVLYFDKDGYTNANGRTKFLIKSLLVNPMLMKIF

Homology

[Close]

BLAST of CmaCh16G008240.1 vs. Swiss-Prot
Match: GCSY1_CUCME ((+)-gamma-cadinene synthase OS=Cucumis melo PE=1 SV=1)

HSP 1 Score: 196.4 bits (498), Expect = 2.0e-49
Identity = 90/133 (67.67%), Postives = 111/133 (83.46%), Query Frame = 1


Query: 1   MGD-IVTNEIIEWFSRRPKVIKTATIIGRLMDDLVSHKFEQQREHVASGVQCYMEQYGCL 60
           +GD IVTNE+++W S  P++IK +TII RLMDD+ SHKFEQ+REHVAS V+CYM+QY C 
Sbjct: 437 LGDHIVTNEVLQWLSNGPQIIKASTIICRLMDDIASHKFEQEREHVASAVECYMKQYDCS 496

Query: 61  EEEACVELHKQVVDAWKDINEACLHPIDVPMPILMRVVNVSRFIEVLYFDKDGYTNANGR 120
           EEEAC+ELHK+VVDAWKD NEA   P +VP+P+LMRV+N SR I +LY D+DGYTNA   
Sbjct: 497 EEEACIELHKEVVDAWKDTNEAFYRPFNVPVPVLMRVLNFSRVINLLYLDEDGYTNAKSG 556

Query: 121 TKFLIKSLLVNPM 133
           TKFLIKSLLV+P+
Sbjct: 557 TKFLIKSLLVDPL 569

[Close]

BLAST of CmaCh16G008240.1 vs. Swiss-Prot
Match: SAUST_SANAS (Probable sesquiterpene synthase OS=Santalum austrocaledonicum GN=SesquiTPS PE=3 SV=1)

HSP 1 Score: 155.6 bits (392), Expect = 3.9e-37
Identity = 71/134 (52.99%), Postives = 97/134 (72.39%), Query Frame = 1


Query: 1   MGDIVTNEIIEWFSRRPKVIKTATIIGRLMDDLVSHKFEQQREHVASGVQCYMEQYGCLE 60
           MG+I + E  +W    P VI+ +  +GRLMDD  SHKFEQ+R HVASG++CYM+QYG  E
Sbjct: 429 MGEIASKEAFDWLFSHPPVIEASESVGRLMDDTRSHKFEQERGHVASGIECYMKQYGVTE 488

Query: 61  EEACVELHKQVVDAWKDINEACLHPIDVPMPILMRVVNVSRFIEVLYFDKDGYTNANGRT 120
           EEA  E  K++V AWKDINE CL P  VP P+LMR++N++R I+V+Y ++DGYT+     
Sbjct: 489 EEARDEFRKRLVKAWKDINEECLRPYRVPKPLLMRILNLTRVIDVIYKNEDGYTHVKKAM 548

Query: 121 KFLIKSLLVNPMLM 135
           K  I SLL++PM++
Sbjct: 549 KDNIASLLIDPMIV 562

[Close]

BLAST of CmaCh16G008240.1 vs. Swiss-Prot
Match: STPS1_SANAL (Sesquiterpene synthase OS=Santalum album PE=1 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 6.6e-37
Identity = 71/134 (52.99%), Postives = 97/134 (72.39%), Query Frame = 1


Query: 1   MGDIVTNEIIEWFSRRPKVIKTATIIGRLMDDLVSHKFEQQREHVASGVQCYMEQYGCLE 60
           MG+I + E  +W    P VI+ +  + RLMDD+ SHKFEQ+R HVASG++CYM+QYG  E
Sbjct: 426 MGEIASKEAFDWLFSHPPVIEASESVCRLMDDMRSHKFEQERGHVASGIECYMKQYGVTE 485

Query: 61  EEACVELHKQVVDAWKDINEACLHPIDVPMPILMRVVNVSRFIEVLYFDKDGYTNANGRT 120
           EEA  E  KQ+V AWKDINE CL P  VP P+LMR++N++R I+V+Y ++DGYT+     
Sbjct: 486 EEAHDEFRKQLVKAWKDINEECLRPYRVPKPLLMRILNLTRVIDVIYKNEDGYTHVKKAM 545

Query: 121 KFLIKSLLVNPMLM 135
           K  I SLL++PM++
Sbjct: 546 KDNIASLLIDPMIV 559

[Close]

BLAST of CmaCh16G008240.1 vs. Swiss-Prot
Match: SMST_SANMU (Probable sesquiterpene synthase OS=Santalum murrayanum GN=STPS PE=3 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 2.5e-36
Identity = 69/134 (51.49%), Postives = 97/134 (72.39%), Query Frame = 1


Query: 1   MGDIVTNEIIEWFSRRPKVIKTATIIGRLMDDLVSHKFEQQREHVASGVQCYMEQYGCLE 60
           MG+I + E  +W    P VI+ +  +GRLMDD+ SHKFEQ+R HVASG++CYM+QYG  E
Sbjct: 429 MGEIASKEAFDWLFSHPPVIEASESVGRLMDDMRSHKFEQERGHVASGIECYMKQYGVTE 488

Query: 61  EEACVELHKQVVDAWKDINEACLHPIDVPMPILMRVVNVSRFIEVLYFDKDGYTNANGRT 120
           EEA  E  K++V AWKDINE CL P  VP P+L R++N++R I+V+Y ++DGYT+     
Sbjct: 489 EEAHDEFRKRLVKAWKDINEECLRPYRVPKPLLTRILNLTRVIDVIYKNEDGYTHVKKAM 548

Query: 121 KFLIKSLLVNPMLM 135
           K  I SLL++P+++
Sbjct: 549 KDNIASLLIDPVIV 562

[Close]

BLAST of CmaCh16G008240.1 vs. Swiss-Prot
Match: SAST_SANAL (Probable sesquiterpene synthase OS=Santalum album GN=SesquiTPS1 PE=3 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 3.3e-36
Identity = 69/134 (51.49%), Postives = 97/134 (72.39%), Query Frame = 1


Query: 1   MGDIVTNEIIEWFSRRPKVIKTATIIGRLMDDLVSHKFEQQREHVASGVQCYMEQYGCLE 60
           MG+I + E  +W    P VI+ +  +GRLMDD+ SHKFE++R HVASG++CYM+QY   E
Sbjct: 426 MGEIASKEAFDWLFSHPPVIEASESVGRLMDDMRSHKFERERGHVASGIECYMKQYSVTE 485

Query: 61  EEACVELHKQVVDAWKDINEACLHPIDVPMPILMRVVNVSRFIEVLYFDKDGYTNANGRT 120
           EEA  E  K++V AWKDINE CL P  VP P+LMR++N++R I+V+Y ++DGYT+     
Sbjct: 486 EEAYDEFCKRLVKAWKDINEECLRPYHVPKPLLMRILNLTRVIDVIYKNEDGYTHVKKAM 545

Query: 121 KFLIKSLLVNPMLM 135
           K  I SLL++PM++
Sbjct: 546 KDNIASLLIDPMIV 559

[Close]

BLAST of CmaCh16G008240.1 vs. TrEMBL
Match: A0A0A0L2I8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G097540 PE=3 SV=1)

HSP 1 Score: 196.4 bits (498), Expect = 2.2e-47
Identity = 91/133 (68.42%), Postives = 111/133 (83.46%), Query Frame = 1


Query: 1   MGD-IVTNEIIEWFSRRPKVIKTATIIGRLMDDLVSHKFEQQREHVASGVQCYMEQYGCL 60
           +GD IVTNE+++W S  P++IK +TII RLMDD+ SHKFEQ+REHVAS V+ YMEQY C 
Sbjct: 424 LGDHIVTNEVLQWLSNGPQIIKASTIICRLMDDIASHKFEQEREHVASAVESYMEQYDCS 483

Query: 61  EEEACVELHKQVVDAWKDINEACLHPIDVPMPILMRVVNVSRFIEVLYFDKDGYTNANGR 120
           EEEACVELHK+VVDAWKD NEA   P +VP+P+LMRV+N SR + +LY D+DGYTNA  R
Sbjct: 484 EEEACVELHKEVVDAWKDTNEAFYRPFNVPLPVLMRVLNFSRVMNLLYLDEDGYTNAKSR 543

Query: 121 TKFLIKSLLVNPM 133
           TKFLIKSLLV+P+
Sbjct: 544 TKFLIKSLLVDPL 556

[Close]

BLAST of CmaCh16G008240.1 vs. TrEMBL
Match: A0A0B4VEV4_CUCME (Sesquiterpene synthase Tps1 OS=Cucumis melo PE=2 SV=1)

HSP 1 Score: 176.0 bits (445), Expect = 3.1e-41
Identity = 78/134 (58.21%), Postives = 103/134 (76.87%), Query Frame = 1


Query: 1   MGDIVTNEIIEWFSRRPKVIKTATIIGRLMDDLVSHKFEQQREHVASGVQCYMEQYGCLE 60
           MGDI T EI +W    PK++K +T I RLMDD+VS+KFE++REHV S V+CYM  YGC E
Sbjct: 437 MGDIATKEIFDWLFDCPKILKASTTISRLMDDVVSYKFEKEREHVVSAVECYMNNYGCSE 496

Query: 61  EEACVELHKQVVDAWKDINEACLHPIDVPMPILMRVVNVSRFIEVLYFDKDGYTNANGRT 120
           EE C +L KQV DAWK IN+ CLHP+ VP+P L+ V+N++R + +LY  +DGYTN+ GRT
Sbjct: 497 EETCADLLKQVEDAWKTINKCCLHPMTVPIPFLICVLNLTRVMALLYSGEDGYTNSKGRT 556

Query: 121 KFLIKSLLVNPMLM 135
           K LI+SLL++P+ M
Sbjct: 557 KLLIQSLLIDPLYM 570

[Close]

BLAST of CmaCh16G008240.1 vs. TrEMBL
Match: A0A0A0L579_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G097040 PE=3 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 7.6e-40
Identity = 75/132 (56.82%), Postives = 102/132 (77.27%), Query Frame = 1


Query: 1   MGDIVTNEIIEWFSRRPKVIKTATIIGRLMDDLVSHKFEQQREHVASGVQCYMEQYGCLE 60
           MGDI T E+ EW    PK++K +T I RLMDD+VS+KFE++REH+ S V+CYM  +G  E
Sbjct: 434 MGDIATKEVFEWLFDCPKILKASTTISRLMDDVVSYKFEKEREHIVSAVECYMSNHGRSE 493

Query: 61  EEACVELHKQVVDAWKDINEACLHPIDVPMPILMRVVNVSRFIEVLYFDKDGYTNANGRT 120
           +E C EL KQV DAWK INE CLHP++VPMP L+ ++N++R + +LY  +DGYTN+ GRT
Sbjct: 494 DETCAELLKQVEDAWKTINECCLHPMNVPMPFLICLLNLTRVMALLYSHEDGYTNSKGRT 553

Query: 121 KFLIKSLLVNPM 133
           K LI+SLL++P+
Sbjct: 554 KLLIQSLLIDPL 565

[Close]

BLAST of CmaCh16G008240.1 vs. TrEMBL
Match: Q66PX8_CUCSA (Beta-caryophyllene synthase OS=Cucumis sativus PE=2 SV=1)

HSP 1 Score: 169.9 bits (429), Expect = 2.2e-39
Identity = 74/132 (56.06%), Postives = 102/132 (77.27%), Query Frame = 1


Query: 1   MGDIVTNEIIEWFSRRPKVIKTATIIGRLMDDLVSHKFEQQREHVASGVQCYMEQYGCLE 60
           MGDI T E+ EW    P+++K +T I RLMDD+VS+KFE++REH+ S V+CYM  +G  E
Sbjct: 434 MGDIATKEVFEWLFDCPQILKASTTISRLMDDVVSYKFEKEREHIVSAVECYMSNHGRSE 493

Query: 61  EEACVELHKQVVDAWKDINEACLHPIDVPMPILMRVVNVSRFIEVLYFDKDGYTNANGRT 120
           +E C EL KQV DAWK INE CLHP++VPMP L+ ++N++R + +LY  +DGYTN+ GRT
Sbjct: 494 DETCAELLKQVEDAWKTINECCLHPMNVPMPFLICLLNLTRVMALLYSHEDGYTNSKGRT 553

Query: 121 KFLIKSLLVNPM 133
           K LI+SLL++P+
Sbjct: 554 KLLIQSLLIDPL 565

[Close]

BLAST of CmaCh16G008240.1 vs. TrEMBL
Match: A0A067L4J4_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00771 PE=4 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 8.4e-39
Identity = 77/133 (57.89%), Postives = 100/133 (75.19%), Query Frame = 1


Query: 1   MGDIVTNEIIEWFSRRPKVIKTATIIGRLMDDLVSHKFEQQREHVASGVQCYMEQYGCLE 60
           MGDIVT E  +W    PK++K + II RLMDD+VSHKFEQ+R HVAS ++CYM+QYG  E
Sbjct: 1   MGDIVTKESFDWLFSDPKILKASKIICRLMDDIVSHKFEQERGHVASSIECYMKQYGVTE 60

Query: 61  EEACVELHKQVVDAWKDINEACLHPIDVPMPILMRVVNVSRFIEVLYFDKDGYTNANGRT 120
           EE   E  KQ+V+AWKDINE  L P  VPMPIL+R++N++R I+VLY  +DGYT+A G  
Sbjct: 61  EETIEEFRKQIVNAWKDINEEFLFPTSVPMPILLRILNLARVIDVLYKSEDGYTHAEGVL 120

Query: 121 KFLIKSLLVNPML 134
           K  + SLL++P+L
Sbjct: 121 KDFVSSLLIDPVL 133

[Close]

BLAST of CmaCh16G008240.1 vs. TAIR10
Match: AT5G23960.1 (AT5G23960.1 terpene synthase 21)

HSP 1 Score: 115.5 bits (288), Expect = 2.5e-26
Identity = 53/128 (41.41%), Postives = 79/128 (61.72%), Query Frame = 1


Query: 1   MGDIVTNEIIEWFSRRPKVIKTATIIGRLMDDLVSHKFEQQREHVASGVQCYMEQYGCLE 60
           M D+   +  EW S  PK+   + II R  DD+ S++FE +REHVA+G+ CYM+Q+G  +
Sbjct: 415 MTDVAKLDAFEWLSSHPKIRVASEIISRFTDDISSYEFEHKREHVATGIDCYMQQFGVSK 474

Query: 61  EEACVELHKQVVDAWKDINEACLHPIDVPMPILMRVVNVSRFIEVLYFDKDGYTNANGRT 120
           E A   +   V DAWKD+N+  + P   P P+LMRV+N+SR I+V Y  +D YTN     
Sbjct: 475 ERAVEVMGNIVSDAWKDLNQELMRPHVFPFPLLMRVLNLSRVIDVFYRYQDAYTNPKLLK 534

Query: 121 KFLIKSLL 129
           + ++  L+
Sbjct: 535 EHIVSLLI 542

[Close]

BLAST of CmaCh16G008240.1 vs. TAIR10
Match: AT4G20200.1 (AT4G20200.1 Terpenoid cyclases/Protein prenyltransferases superfamily protein)

HSP 1 Score: 102.1 bits (253), Expect = 2.9e-22
Identity = 51/130 (39.23%), Postives = 79/130 (60.77%), Query Frame = 1


Query: 1   MGDIVTNEIIEWFSRRPKVIKTATIIGRLMDDLVSHKFEQQREHVASGVQCYMEQYGCLE 60
           MG + T E  EW   RPK+++  +I GRLM+DL+ ++ +  R +V + V CYM+QYG  +
Sbjct: 471 MGKMATKEAFEWLKSRPKLVQYLSIKGRLMNDLMGYEDDMSRGYVTNAVNCYMKQYGVTK 530

Query: 61  EEACVELHKQVVDAWKDINEACLHPIDVPMPILMRVVNVSRFIEVLYFDKDGYTNANGRT 120
           EEA  EL+K VV A K +NE  L    VP  +L   ++++R + V Y   +G+TN  G+ 
Sbjct: 531 EEAFRELYKIVVAANKTLNEEFLSTTGVPHFLLKATIDLARMMTVAYNVNEGFTNPQGKI 590

Query: 121 KFLIKSLLVN 131
           K  + S+ V+
Sbjct: 591 KEYMTSMFVD 600

[Close]

BLAST of CmaCh16G008240.1 vs. TAIR10
Match: AT1G48800.1 (AT1G48800.1 Terpenoid cyclases/Protein prenyltransferases superfamily protein)

HSP 1 Score: 97.4 bits (241), Expect = 7.1e-21
Identity = 49/130 (37.69%), Postives = 76/130 (58.46%), Query Frame = 1


Query: 1   MGDIVTNEIIEWFSRRPKVIKTATIIGRLMDDLVSHKFEQQREHVASGVQCYMEQYGCLE 60
           M +I   E  EW   R K+++  +   RL++DL  +K + +R +V + + CY +QYG  E
Sbjct: 473 MENINKKEAYEWLIFRDKLVRAMSTKARLVNDLFGYKDDMRRGYVTNSINCYKKQYGVTE 532

Query: 61  EEACVELHKQVVDAWKDINEACLHPIDVPMPILMRVVNVSRFIEVLYFDKDGYTNANGRT 120
           EEA  +LH+ V D  K +NE  L PI+VP  +L  V++  R I + Y ++DG+T  NG  
Sbjct: 533 EEAFRKLHQMVADGDKMMNEEFLKPINVPHQVLKAVLDTLRAINICYDNEDGFTRLNGNL 592

Query: 121 KFLIKSLLVN 131
           K  I S+ V+
Sbjct: 593 KNYITSMYVD 602

[Close]

BLAST of CmaCh16G008240.1 vs. TAIR10
Match: AT1G31950.1 (AT1G31950.1 Terpenoid cyclases/Protein prenyltransferases superfamily protein)

HSP 1 Score: 94.4 bits (233), Expect = 6.0e-20
Identity = 49/133 (36.84%), Postives = 78/133 (58.65%), Query Frame = 1


Query: 1   MGDIVTNEIIEWFSRRPKVIKTATIIGRLMDDLVSHKFEQQREHVASGVQCYMEQYGCLE 60
           M DI   E  EW +  P +IK  T + RL +D+ +++ E  R  VA+G+ CYM+QYG  +
Sbjct: 471 MEDINEKEAFEWLNSNPLIIKHLTAMFRLANDVGTYETEINRGEVANGLNCYMKQYGVTK 530

Query: 61  EEACVELHKQVVDAWKDINEACLHPID-VPMPILMRVVNVSRFIEVLYFDKDGYTNANGR 120
           EEA  EL K  V   K + E  ++  D VP  +L+R +N++R  +V Y + DGY+   G+
Sbjct: 531 EEASRELRKMYVYRKKVVVEEFMNSHDHVPRQVLLRCLNIARIFDVFYTEGDGYSEPKGK 590

Query: 121 TKFLIKSLLVNPM 133
            +  + SL ++P+
Sbjct: 591 IEHFMTSLYLHPI 603

[Close]

BLAST of CmaCh16G008240.1 vs. TAIR10
Match: AT4G20210.1 (AT4G20210.1 Terpenoid cyclases/Protein prenyltransferases superfamily protein)

HSP 1 Score: 94.0 bits (232), Expect = 7.8e-20
Identity = 48/132 (36.36%), Postives = 74/132 (56.06%), Query Frame = 1


Query: 1   MGDIVTNEIIEWFSRRPKVIKTATIIGRLMDDLVSHKFEQQREHVASGVQCYMEQYGCLE 60
           +G I    + EW   RPK +K A+  GRLM+D+   + + +RE+V +GV  YM+QYG  +
Sbjct: 467 IGHIGDEGVYEWLKSRPKFLKAASTYGRLMNDIAGFEDDMKREYVITGVNTYMKQYGLTK 526

Query: 61  EEACVELHKQVVDAWKDINEACLHPIDVPMPILMRVVNVSRFIEVLYFDKDGYTNANGRT 120
            EA  EL   V      +NE  L   D+P  I  +V+NV+R + V Y + +G+T+  G+ 
Sbjct: 527 MEAIRELQNLVEYNHTIMNEEFLKTTDLPRQIRKQVINVARSLNVSYTEGEGFTHTKGKV 586

Query: 121 KFLIKSLLVNPM 133
              I SL + P+
Sbjct: 587 DEYITSLFITPI 598

[Close]

BLAST of CmaCh16G008240.1 vs. NCBI nr
Match: gi|778676208|ref|XP_011650545.1| (PREDICTED: (+)-gamma-cadinene synthase [Cucumis sativus])

HSP 1 Score: 196.4 bits (498), Expect = 3.2e-47
Identity = 91/133 (68.42%), Postives = 111/133 (83.46%), Query Frame = 1


Query: 1   MGD-IVTNEIIEWFSRRPKVIKTATIIGRLMDDLVSHKFEQQREHVASGVQCYMEQYGCL 60
           +GD IVTNE+++W S  P++IK +TII RLMDD+ SHKFEQ+REHVAS V+ YMEQY C 
Sbjct: 424 LGDHIVTNEVLQWLSNGPQIIKASTIICRLMDDIASHKFEQEREHVASAVESYMEQYDCS 483

Query: 61  EEEACVELHKQVVDAWKDINEACLHPIDVPMPILMRVVNVSRFIEVLYFDKDGYTNANGR 120
           EEEACVELHK+VVDAWKD NEA   P +VP+P+LMRV+N SR + +LY D+DGYTNA  R
Sbjct: 484 EEEACVELHKEVVDAWKDTNEAFYRPFNVPLPVLMRVLNFSRVMNLLYLDEDGYTNAKSR 543

Query: 121 TKFLIKSLLVNPM 133
           TKFLIKSLLV+P+
Sbjct: 544 TKFLIKSLLVDPL 556

[Close]

BLAST of CmaCh16G008240.1 vs. NCBI nr
Match: gi|661902982|ref|NP_001284382.1| ((+)-gamma-cadinene synthase [Cucumis melo])

HSP 1 Score: 196.4 bits (498), Expect = 3.2e-47
Identity = 90/133 (67.67%), Postives = 111/133 (83.46%), Query Frame = 1


Query: 1   MGD-IVTNEIIEWFSRRPKVIKTATIIGRLMDDLVSHKFEQQREHVASGVQCYMEQYGCL 60
           +GD IVTNE+++W S  P++IK +TII RLMDD+ SHKFEQ+REHVAS V+CYM+QY C 
Sbjct: 437 LGDHIVTNEVLQWLSNGPQIIKASTIICRLMDDIASHKFEQEREHVASAVECYMKQYDCS 496

Query: 61  EEEACVELHKQVVDAWKDINEACLHPIDVPMPILMRVVNVSRFIEVLYFDKDGYTNANGR 120
           EEEAC+ELHK+VVDAWKD NEA   P +VP+P+LMRV+N SR I +LY D+DGYTNA   
Sbjct: 497 EEEACIELHKEVVDAWKDTNEAFYRPFNVPVPVLMRVLNFSRVINLLYLDEDGYTNAKSG 556

Query: 121 TKFLIKSLLVNPM 133
           TKFLIKSLLV+P+
Sbjct: 557 TKFLIKSLLVDPL 569

[Close]

BLAST of CmaCh16G008240.1 vs. NCBI nr
Match: gi|659102820|ref|XP_008452330.1| (PREDICTED: (+)-gamma-cadinene synthase-like [Cucumis melo])

HSP 1 Score: 177.6 bits (449), Expect = 1.5e-41
Identity = 78/134 (58.21%), Postives = 104/134 (77.61%), Query Frame = 1


Query: 1   MGDIVTNEIIEWFSRRPKVIKTATIIGRLMDDLVSHKFEQQREHVASGVQCYMEQYGCLE 60
           MGDI T EI +W    PK++K +T I RLMDD+VS+KFE++REHV S V+CYM  YGC E
Sbjct: 437 MGDIATEEIFDWLFDCPKILKASTTISRLMDDVVSYKFEKEREHVVSAVECYMNNYGCSE 496

Query: 61  EEACVELHKQVVDAWKDINEACLHPIDVPMPILMRVVNVSRFIEVLYFDKDGYTNANGRT 120
           EE C  L KQV DAWK+IN+ CLHP+ VP+P L+ V+N++R + +LY D+DGYTN+ GRT
Sbjct: 497 EETCANLLKQVKDAWKNINKCCLHPMTVPVPFLVCVLNLTRVMALLYSDEDGYTNSKGRT 556

Query: 121 KFLIKSLLVNPMLM 135
           K LI+SLL++P+ +
Sbjct: 557 KLLIQSLLIDPLYL 570

[Close]

BLAST of CmaCh16G008240.1 vs. NCBI nr
Match: gi|745672488|gb|AJD19682.1| (sesquiterpene synthase Tps1 [Cucumis melo])

HSP 1 Score: 176.0 bits (445), Expect = 4.4e-41
Identity = 78/134 (58.21%), Postives = 103/134 (76.87%), Query Frame = 1


Query: 1   MGDIVTNEIIEWFSRRPKVIKTATIIGRLMDDLVSHKFEQQREHVASGVQCYMEQYGCLE 60
           MGDI T EI +W    PK++K +T I RLMDD+VS+KFE++REHV S V+CYM  YGC E
Sbjct: 437 MGDIATKEIFDWLFDCPKILKASTTISRLMDDVVSYKFEKEREHVVSAVECYMNNYGCSE 496

Query: 61  EEACVELHKQVVDAWKDINEACLHPIDVPMPILMRVVNVSRFIEVLYFDKDGYTNANGRT 120
           EE C +L KQV DAWK IN+ CLHP+ VP+P L+ V+N++R + +LY  +DGYTN+ GRT
Sbjct: 497 EETCADLLKQVEDAWKTINKCCLHPMTVPIPFLICVLNLTRVMALLYSGEDGYTNSKGRT 556

Query: 121 KFLIKSLLVNPMLM 135
           K LI+SLL++P+ M
Sbjct: 557 KLLIQSLLIDPLYM 570

[Close]

BLAST of CmaCh16G008240.1 vs. NCBI nr
Match: gi|700201056|gb|KGN56189.1| (hypothetical protein Csa_3G097040 [Cucumis sativus])

HSP 1 Score: 171.4 bits (433), Expect = 1.1e-39
Identity = 75/132 (56.82%), Postives = 102/132 (77.27%), Query Frame = 1


Query: 1   MGDIVTNEIIEWFSRRPKVIKTATIIGRLMDDLVSHKFEQQREHVASGVQCYMEQYGCLE 60
           MGDI T E+ EW    PK++K +T I RLMDD+VS+KFE++REH+ S V+CYM  +G  E
Sbjct: 434 MGDIATKEVFEWLFDCPKILKASTTISRLMDDVVSYKFEKEREHIVSAVECYMSNHGRSE 493

Query: 61  EEACVELHKQVVDAWKDINEACLHPIDVPMPILMRVVNVSRFIEVLYFDKDGYTNANGRT 120
           +E C EL KQV DAWK INE CLHP++VPMP L+ ++N++R + +LY  +DGYTN+ GRT
Sbjct: 494 DETCAELLKQVEDAWKTINECCLHPMNVPMPFLICLLNLTRVMALLYSHEDGYTNSKGRT 553

Query: 121 KFLIKSLLVNPM 133
           K LI+SLL++P+
Sbjct: 554 KLLIQSLLIDPL 565

The following BLAST results are available for this feature:

BLAST of CmaCh16G008240.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
GCSY1_CUCME	2.0e-49	67.67	(+)-gamma-cadinene synthase OS=Cucumis melo PE=1 SV=1	[more]
SAUST_SANAS	3.9e-37	52.99	Probable sesquiterpene synthase OS=Santalum austrocaledonicum GN=SesquiTPS PE=3 ...	[more]
STPS1_SANAL	6.6e-37	52.99	Sesquiterpene synthase OS=Santalum album PE=1 SV=1	[more]
SMST_SANMU	2.5e-36	51.49	Probable sesquiterpene synthase OS=Santalum murrayanum GN=STPS PE=3 SV=1	[more]
SAST_SANAL	3.3e-36	51.49	Probable sesquiterpene synthase OS=Santalum album GN=SesquiTPS1 PE=3 SV=1	[more]

BLAST of CmaCh16G008240.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L2I8_CUCSA	2.2e-47	68.42	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G097540 PE=3 SV=1	[more]
A0A0B4VEV4_CUCME	3.1e-41	58.21	Sesquiterpene synthase Tps1 OS=Cucumis melo PE=2 SV=1	[more]
A0A0A0L579_CUCSA	7.6e-40	56.82	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G097040 PE=3 SV=1	[more]
Q66PX8_CUCSA	2.2e-39	56.06	Beta-caryophyllene synthase OS=Cucumis sativus PE=2 SV=1	[more]
A0A067L4J4_JATCU	8.4e-39	57.89	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00771 PE=4 SV=1	[more]

BLAST of CmaCh16G008240.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G23960.1	2.5e-26	41.41	terpene synthase 21	[more]
AT4G20200.1	2.9e-22	39.23	Terpenoid cyclases/Protein prenyltransferases superfamily protein	[more]
AT1G48800.1	7.1e-21	37.69	Terpenoid cyclases/Protein prenyltransferases superfamily protein	[more]
AT1G31950.1	6.0e-20	36.84	Terpenoid cyclases/Protein prenyltransferases superfamily protein	[more]
AT4G20210.1	7.8e-20	36.36	Terpenoid cyclases/Protein prenyltransferases superfamily protein	[more]

BLAST of CmaCh16G008240.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778676208\|ref\|XP_011650545.1\|	3.2e-47	68.42	PREDICTED: (+)-gamma-cadinene synthase [Cucumis sativus]	[more]
gi\|661902982\|ref\|NP_001284382.1\|	3.2e-47	67.67	(+)-gamma-cadinene synthase [Cucumis melo]	[more]
gi\|659102820\|ref\|XP_008452330.1\|	1.5e-41	58.21	PREDICTED: (+)-gamma-cadinene synthase-like [Cucumis melo]	[more]
gi\|745672488\|gb\|AJD19682.1\|	4.4e-41	58.21	sesquiterpene synthase Tps1 [Cucumis melo]	[more]
gi\|700201056\|gb\|KGN56189.1\|	1.1e-39	56.82	hypothetical protein Csa_3G097040 [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR005630	Terpene_synthase_metal-bd
IPR008949	Isoprenoid_synthase_dom_sf

Vocabulary: **Molecular Function**
Term	Definition
GO:0000287	magnesium ion binding
GO:0010333	terpene synthase activity
GO:0016829	lyase activity

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045338	farnesyl diphosphate metabolic process
biological_process	GO:0051762	sesquiterpene biosynthetic process
biological_process	GO:0016114	terpenoid biosynthetic process
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0016829	lyase activity
molecular_function	GO:0000287	magnesium ion binding
molecular_function	GO:0010333	terpene synthase activity
molecular_function	GO:0047461	(+)-delta-cadinene synthase activity

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmaCh16G008240	CmaCh16G008240	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmaCh16G008240.1	CmaCh16G008240.1-protein	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh16G008240.1.exon.1	CmaCh16G008240.1.exon.1	exon
CmaCh16G008240.1.exon.2	CmaCh16G008240.1.exon.2	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh16G008240.1.CDS.1	CmaCh16G008240.1.CDS.1	CDS
CmaCh16G008240.1.CDS.2	CmaCh16G008240.1.CDS.2	CDS

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005630	Terpene synthase, metal-binding domain	PFAM	PF03936	Terpene_synth_C	coord: 1..77 score: 1.3
IPR008949	Isoprenoid synthase domain	GENE3D	G3DSA:1.10.600.10		coord: 1..132 score: 1.2
IPR008949	Isoprenoid synthase domain	unknown	SSF48576	Terpenoid synthases	coord: 1..132 score: 6.62
None	No IPR available	PANTHER	PTHR31225	FAMILY NOT NAMED	coord: 1..134 score: 3.2
None	No IPR available	PANTHER	PTHR31225:SF15	ALPHA-HUMULENE/(-)-(E)-BETA-CARYOPHYLLENE SYNTHASE	coord: 1..134 score: 3.2