CmaCh16G008240 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh16G008240
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	(+)-delta-cadinene synthase
Location	Cma_Chr16 : 4579109 .. 4579609 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTGACATAGTAACAAATGAGATAATTGAATGGTTTTCTAGAAGACCTAAAGTTATAAAAACCGCAACAATAATTGGCAGACTCATGGATGACCTCGTTTCCCACAAGGTATATATTGTTTACTATCCTTAGAGAGCAGCACAAACAAAGTTGAATTTTTTAAAGTAAACTGCATTTACTTGTTTTCTATTTCAGTTTGAGCAACAAAGGGAACATGTTGCTTCGGGGGTTCAATGTTACATGGAACAATATGGTTGTTTAGAGGAAGAAGCTTGCGTTGAACTTCATAAACAAGTGGTTGACGCATGGAAGGACATAAATGAAGCATGTCTTCATCCAATCGATGTTCCAATGCCTATTCTTATGCGAGTTGTGAACGTTTCTAGATTTATTGAAGTGCTTTATTTTGATAAGGATGGATATACAAATGCAAATGGGCGAACAAAGTTTCTTATCAAATCTCTTCTCGTTAACCCAATGTTGATGAAAATATTTTAG

mRNA sequence

ATGGGTGACATAGTAACAAATGAGATAATTGAATGGTTTTCTAGAAGACCTAAAGTTATAAAAACCGCAACAATAATTGGCAGACTCATGGATGACCTCGTTTCCCACAAGTTTGAGCAACAAAGGGAACATGTTGCTTCGGGGGTTCAATGTTACATGGAACAATATGGTTGTTTAGAGGAAGAAGCTTGCGTTGAACTTCATAAACAAGTGGTTGACGCATGGAAGGACATAAATGAAGCATGTCTTCATCCAATCGATGTTCCAATGCCTATTCTTATGCGAGTTGTGAACGTTTCTAGATTTATTGAAGTGCTTTATTTTGATAAGGATGGATATACAAATGCAAATGGGCGAACAAAGTTTCTTATCAAATCTCTTCTCGTTAACCCAATGTTGATGAAAATATTTTAG

Coding sequence (CDS)

ATGGGTGACATAGTAACAAATGAGATAATTGAATGGTTTTCTAGAAGACCTAAAGTTATAAAAACCGCAACAATAATTGGCAGACTCATGGATGACCTCGTTTCCCACAAGTTTGAGCAACAAAGGGAACATGTTGCTTCGGGGGTTCAATGTTACATGGAACAATATGGTTGTTTAGAGGAAGAAGCTTGCGTTGAACTTCATAAACAAGTGGTTGACGCATGGAAGGACATAAATGAAGCATGTCTTCATCCAATCGATGTTCCAATGCCTATTCTTATGCGAGTTGTGAACGTTTCTAGATTTATTGAAGTGCTTTATTTTGATAAGGATGGATATACAAATGCAAATGGGCGAACAAAGTTTCTTATCAAATCTCTTCTCGTTAACCCAATGTTGATGAAAATATTTTAG

Protein sequence

MGDIVTNEIIEWFSRRPKVIKTATIIGRLMDDLVSHKFEQQREHVASGVQCYMEQYGCLEEEACVELHKQVVDAWKDINEACLHPIDVPMPILMRVVNVSRFIEVLYFDKDGYTNANGRTKFLIKSLLVNPMLMKIF

Homology

[Close]

BLAST of CmaCh16G008240 vs. Swiss-Prot
Match: GCSY1_CUCME ((+)-gamma-cadinene synthase OS=Cucumis melo PE=1 SV=1)

HSP 1 Score: 196.4 bits (498), Expect = 2.0e-49
Identity = 90/133 (67.67%), Postives = 111/133 (83.46%), Query Frame = 1


Query: 1   MGD-IVTNEIIEWFSRRPKVIKTATIIGRLMDDLVSHKFEQQREHVASGVQCYMEQYGCL 60
           +GD IVTNE+++W S  P++IK +TII RLMDD+ SHKFEQ+REHVAS V+CYM+QY C 
Sbjct: 437 LGDHIVTNEVLQWLSNGPQIIKASTIICRLMDDIASHKFEQEREHVASAVECYMKQYDCS 496

Query: 61  EEEACVELHKQVVDAWKDINEACLHPIDVPMPILMRVVNVSRFIEVLYFDKDGYTNANGR 120
           EEEAC+ELHK+VVDAWKD NEA   P +VP+P+LMRV+N SR I +LY D+DGYTNA   
Sbjct: 497 EEEACIELHKEVVDAWKDTNEAFYRPFNVPVPVLMRVLNFSRVINLLYLDEDGYTNAKSG 556

Query: 121 TKFLIKSLLVNPM 133
           TKFLIKSLLV+P+
Sbjct: 557 TKFLIKSLLVDPL 569

[Close]

BLAST of CmaCh16G008240 vs. Swiss-Prot
Match: SAUST_SANAS (Probable sesquiterpene synthase OS=Santalum austrocaledonicum GN=SesquiTPS PE=3 SV=1)

HSP 1 Score: 155.6 bits (392), Expect = 3.9e-37
Identity = 71/134 (52.99%), Postives = 97/134 (72.39%), Query Frame = 1


Query: 1   MGDIVTNEIIEWFSRRPKVIKTATIIGRLMDDLVSHKFEQQREHVASGVQCYMEQYGCLE 60
           MG+I + E  +W    P VI+ +  +GRLMDD  SHKFEQ+R HVASG++CYM+QYG  E
Sbjct: 429 MGEIASKEAFDWLFSHPPVIEASESVGRLMDDTRSHKFEQERGHVASGIECYMKQYGVTE 488

Query: 61  EEACVELHKQVVDAWKDINEACLHPIDVPMPILMRVVNVSRFIEVLYFDKDGYTNANGRT 120
           EEA  E  K++V AWKDINE CL P  VP P+LMR++N++R I+V+Y ++DGYT+     
Sbjct: 489 EEARDEFRKRLVKAWKDINEECLRPYRVPKPLLMRILNLTRVIDVIYKNEDGYTHVKKAM 548

Query: 121 KFLIKSLLVNPMLM 135
           K  I SLL++PM++
Sbjct: 549 KDNIASLLIDPMIV 562

[Close]

BLAST of CmaCh16G008240 vs. Swiss-Prot
Match: STPS1_SANAL (Sesquiterpene synthase OS=Santalum album PE=1 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 6.6e-37
Identity = 71/134 (52.99%), Postives = 97/134 (72.39%), Query Frame = 1


Query: 1   MGDIVTNEIIEWFSRRPKVIKTATIIGRLMDDLVSHKFEQQREHVASGVQCYMEQYGCLE 60
           MG+I + E  +W    P VI+ +  + RLMDD+ SHKFEQ+R HVASG++CYM+QYG  E
Sbjct: 426 MGEIASKEAFDWLFSHPPVIEASESVCRLMDDMRSHKFEQERGHVASGIECYMKQYGVTE 485

Query: 61  EEACVELHKQVVDAWKDINEACLHPIDVPMPILMRVVNVSRFIEVLYFDKDGYTNANGRT 120
           EEA  E  KQ+V AWKDINE CL P  VP P+LMR++N++R I+V+Y ++DGYT+     
Sbjct: 486 EEAHDEFRKQLVKAWKDINEECLRPYRVPKPLLMRILNLTRVIDVIYKNEDGYTHVKKAM 545

Query: 121 KFLIKSLLVNPMLM 135
           K  I SLL++PM++
Sbjct: 546 KDNIASLLIDPMIV 559

[Close]

BLAST of CmaCh16G008240 vs. Swiss-Prot
Match: SMST_SANMU (Probable sesquiterpene synthase OS=Santalum murrayanum GN=STPS PE=3 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 2.5e-36
Identity = 69/134 (51.49%), Postives = 97/134 (72.39%), Query Frame = 1


Query: 1   MGDIVTNEIIEWFSRRPKVIKTATIIGRLMDDLVSHKFEQQREHVASGVQCYMEQYGCLE 60
           MG+I + E  +W    P VI+ +  +GRLMDD+ SHKFEQ+R HVASG++CYM+QYG  E
Sbjct: 429 MGEIASKEAFDWLFSHPPVIEASESVGRLMDDMRSHKFEQERGHVASGIECYMKQYGVTE 488

Query: 61  EEACVELHKQVVDAWKDINEACLHPIDVPMPILMRVVNVSRFIEVLYFDKDGYTNANGRT 120
           EEA  E  K++V AWKDINE CL P  VP P+L R++N++R I+V+Y ++DGYT+     
Sbjct: 489 EEAHDEFRKRLVKAWKDINEECLRPYRVPKPLLTRILNLTRVIDVIYKNEDGYTHVKKAM 548

Query: 121 KFLIKSLLVNPMLM 135
           K  I SLL++P+++
Sbjct: 549 KDNIASLLIDPVIV 562

[Close]

BLAST of CmaCh16G008240 vs. Swiss-Prot
Match: SAST_SANAL (Probable sesquiterpene synthase OS=Santalum album GN=SesquiTPS1 PE=3 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 3.3e-36
Identity = 69/134 (51.49%), Postives = 97/134 (72.39%), Query Frame = 1


Query: 1   MGDIVTNEIIEWFSRRPKVIKTATIIGRLMDDLVSHKFEQQREHVASGVQCYMEQYGCLE 60
           MG+I + E  +W    P VI+ +  +GRLMDD+ SHKFE++R HVASG++CYM+QY   E
Sbjct: 426 MGEIASKEAFDWLFSHPPVIEASESVGRLMDDMRSHKFERERGHVASGIECYMKQYSVTE 485

Query: 61  EEACVELHKQVVDAWKDINEACLHPIDVPMPILMRVVNVSRFIEVLYFDKDGYTNANGRT 120
           EEA  E  K++V AWKDINE CL P  VP P+LMR++N++R I+V+Y ++DGYT+     
Sbjct: 486 EEAYDEFCKRLVKAWKDINEECLRPYHVPKPLLMRILNLTRVIDVIYKNEDGYTHVKKAM 545

Query: 121 KFLIKSLLVNPMLM 135
           K  I SLL++PM++
Sbjct: 546 KDNIASLLIDPMIV 559

[Close]

BLAST of CmaCh16G008240 vs. TrEMBL
Match: A0A0A0L2I8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G097540 PE=3 SV=1)

HSP 1 Score: 196.4 bits (498), Expect = 2.2e-47
Identity = 91/133 (68.42%), Postives = 111/133 (83.46%), Query Frame = 1


Query: 1   MGD-IVTNEIIEWFSRRPKVIKTATIIGRLMDDLVSHKFEQQREHVASGVQCYMEQYGCL 60
           +GD IVTNE+++W S  P++IK +TII RLMDD+ SHKFEQ+REHVAS V+ YMEQY C 
Sbjct: 424 LGDHIVTNEVLQWLSNGPQIIKASTIICRLMDDIASHKFEQEREHVASAVESYMEQYDCS 483

Query: 61  EEEACVELHKQVVDAWKDINEACLHPIDVPMPILMRVVNVSRFIEVLYFDKDGYTNANGR 120
           EEEACVELHK+VVDAWKD NEA   P +VP+P+LMRV+N SR + +LY D+DGYTNA  R
Sbjct: 484 EEEACVELHKEVVDAWKDTNEAFYRPFNVPLPVLMRVLNFSRVMNLLYLDEDGYTNAKSR 543

Query: 121 TKFLIKSLLVNPM 133
           TKFLIKSLLV+P+
Sbjct: 544 TKFLIKSLLVDPL 556

[Close]

BLAST of CmaCh16G008240 vs. TrEMBL
Match: A0A0B4VEV4_CUCME (Sesquiterpene synthase Tps1 OS=Cucumis melo PE=2 SV=1)

HSP 1 Score: 176.0 bits (445), Expect = 3.1e-41
Identity = 78/134 (58.21%), Postives = 103/134 (76.87%), Query Frame = 1


Query: 1   MGDIVTNEIIEWFSRRPKVIKTATIIGRLMDDLVSHKFEQQREHVASGVQCYMEQYGCLE 60
           MGDI T EI +W    PK++K +T I RLMDD+VS+KFE++REHV S V+CYM  YGC E
Sbjct: 437 MGDIATKEIFDWLFDCPKILKASTTISRLMDDVVSYKFEKEREHVVSAVECYMNNYGCSE 496

Query: 61  EEACVELHKQVVDAWKDINEACLHPIDVPMPILMRVVNVSRFIEVLYFDKDGYTNANGRT 120
           EE C +L KQV DAWK IN+ CLHP+ VP+P L+ V+N++R + +LY  +DGYTN+ GRT
Sbjct: 497 EETCADLLKQVEDAWKTINKCCLHPMTVPIPFLICVLNLTRVMALLYSGEDGYTNSKGRT 556

Query: 121 KFLIKSLLVNPMLM 135
           K LI+SLL++P+ M
Sbjct: 557 KLLIQSLLIDPLYM 570

[Close]

BLAST of CmaCh16G008240 vs. TrEMBL
Match: A0A0A0L579_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G097040 PE=3 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 7.6e-40
Identity = 75/132 (56.82%), Postives = 102/132 (77.27%), Query Frame = 1


Query: 1   MGDIVTNEIIEWFSRRPKVIKTATIIGRLMDDLVSHKFEQQREHVASGVQCYMEQYGCLE 60
           MGDI T E+ EW    PK++K +T I RLMDD+VS+KFE++REH+ S V+CYM  +G  E
Sbjct: 434 MGDIATKEVFEWLFDCPKILKASTTISRLMDDVVSYKFEKEREHIVSAVECYMSNHGRSE 493

Query: 61  EEACVELHKQVVDAWKDINEACLHPIDVPMPILMRVVNVSRFIEVLYFDKDGYTNANGRT 120
           +E C EL KQV DAWK INE CLHP++VPMP L+ ++N++R + +LY  +DGYTN+ GRT
Sbjct: 494 DETCAELLKQVEDAWKTINECCLHPMNVPMPFLICLLNLTRVMALLYSHEDGYTNSKGRT 553

Query: 121 KFLIKSLLVNPM 133
           K LI+SLL++P+
Sbjct: 554 KLLIQSLLIDPL 565

[Close]

BLAST of CmaCh16G008240 vs. TrEMBL
Match: Q66PX8_CUCSA (Beta-caryophyllene synthase OS=Cucumis sativus PE=2 SV=1)

HSP 1 Score: 169.9 bits (429), Expect = 2.2e-39
Identity = 74/132 (56.06%), Postives = 102/132 (77.27%), Query Frame = 1


Query: 1   MGDIVTNEIIEWFSRRPKVIKTATIIGRLMDDLVSHKFEQQREHVASGVQCYMEQYGCLE 60
           MGDI T E+ EW    P+++K +T I RLMDD+VS+KFE++REH+ S V+CYM  +G  E
Sbjct: 434 MGDIATKEVFEWLFDCPQILKASTTISRLMDDVVSYKFEKEREHIVSAVECYMSNHGRSE 493

Query: 61  EEACVELHKQVVDAWKDINEACLHPIDVPMPILMRVVNVSRFIEVLYFDKDGYTNANGRT 120
           +E C EL KQV DAWK INE CLHP++VPMP L+ ++N++R + +LY  +DGYTN+ GRT
Sbjct: 494 DETCAELLKQVEDAWKTINECCLHPMNVPMPFLICLLNLTRVMALLYSHEDGYTNSKGRT 553

Query: 121 KFLIKSLLVNPM 133
           K LI+SLL++P+
Sbjct: 554 KLLIQSLLIDPL 565

[Close]

BLAST of CmaCh16G008240 vs. TrEMBL
Match: A0A067L4J4_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00771 PE=4 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 8.4e-39
Identity = 77/133 (57.89%), Postives = 100/133 (75.19%), Query Frame = 1


Query: 1   MGDIVTNEIIEWFSRRPKVIKTATIIGRLMDDLVSHKFEQQREHVASGVQCYMEQYGCLE 60
           MGDIVT E  +W    PK++K + II RLMDD+VSHKFEQ+R HVAS ++CYM+QYG  E
Sbjct: 1   MGDIVTKESFDWLFSDPKILKASKIICRLMDDIVSHKFEQERGHVASSIECYMKQYGVTE 60

Query: 61  EEACVELHKQVVDAWKDINEACLHPIDVPMPILMRVVNVSRFIEVLYFDKDGYTNANGRT 120
           EE   E  KQ+V+AWKDINE  L P  VPMPIL+R++N++R I+VLY  +DGYT+A G  
Sbjct: 61  EETIEEFRKQIVNAWKDINEEFLFPTSVPMPILLRILNLARVIDVLYKSEDGYTHAEGVL 120

Query: 121 KFLIKSLLVNPML 134
           K  + SLL++P+L
Sbjct: 121 KDFVSSLLIDPVL 133

[Close]

BLAST of CmaCh16G008240 vs. TAIR10
Match: AT5G23960.1 (AT5G23960.1 terpene synthase 21)

HSP 1 Score: 115.5 bits (288), Expect = 2.5e-26
Identity = 53/128 (41.41%), Postives = 79/128 (61.72%), Query Frame = 1


Query: 1   MGDIVTNEIIEWFSRRPKVIKTATIIGRLMDDLVSHKFEQQREHVASGVQCYMEQYGCLE 60
           M D+   +  EW S  PK+   + II R  DD+ S++FE +REHVA+G+ CYM+Q+G  +
Sbjct: 415 MTDVAKLDAFEWLSSHPKIRVASEIISRFTDDISSYEFEHKREHVATGIDCYMQQFGVSK 474

Query: 61  EEACVELHKQVVDAWKDINEACLHPIDVPMPILMRVVNVSRFIEVLYFDKDGYTNANGRT 120
           E A   +   V DAWKD+N+  + P   P P+LMRV+N+SR I+V Y  +D YTN     
Sbjct: 475 ERAVEVMGNIVSDAWKDLNQELMRPHVFPFPLLMRVLNLSRVIDVFYRYQDAYTNPKLLK 534

Query: 121 KFLIKSLL 129
           + ++  L+
Sbjct: 535 EHIVSLLI 542

[Close]

BLAST of CmaCh16G008240 vs. TAIR10
Match: AT4G20200.1 (AT4G20200.1 Terpenoid cyclases/Protein prenyltransferases superfamily protein)

HSP 1 Score: 102.1 bits (253), Expect = 2.9e-22
Identity = 51/130 (39.23%), Postives = 79/130 (60.77%), Query Frame = 1


Query: 1   MGDIVTNEIIEWFSRRPKVIKTATIIGRLMDDLVSHKFEQQREHVASGVQCYMEQYGCLE 60
           MG + T E  EW   RPK+++  +I GRLM+DL+ ++ +  R +V + V CYM+QYG  +
Sbjct: 471 MGKMATKEAFEWLKSRPKLVQYLSIKGRLMNDLMGYEDDMSRGYVTNAVNCYMKQYGVTK 530

Query: 61  EEACVELHKQVVDAWKDINEACLHPIDVPMPILMRVVNVSRFIEVLYFDKDGYTNANGRT 120
           EEA  EL+K VV A K +NE  L    VP  +L   ++++R + V Y   +G+TN  G+ 
Sbjct: 531 EEAFRELYKIVVAANKTLNEEFLSTTGVPHFLLKATIDLARMMTVAYNVNEGFTNPQGKI 590

Query: 121 KFLIKSLLVN 131
           K  + S+ V+
Sbjct: 591 KEYMTSMFVD 600

[Close]

BLAST of CmaCh16G008240 vs. TAIR10
Match: AT1G48800.1 (AT1G48800.1 Terpenoid cyclases/Protein prenyltransferases superfamily protein)

HSP 1 Score: 97.4 bits (241), Expect = 7.1e-21
Identity = 49/130 (37.69%), Postives = 76/130 (58.46%), Query Frame = 1


Query: 1   MGDIVTNEIIEWFSRRPKVIKTATIIGRLMDDLVSHKFEQQREHVASGVQCYMEQYGCLE 60
           M +I   E  EW   R K+++  +   RL++DL  +K + +R +V + + CY +QYG  E
Sbjct: 473 MENINKKEAYEWLIFRDKLVRAMSTKARLVNDLFGYKDDMRRGYVTNSINCYKKQYGVTE 532

Query: 61  EEACVELHKQVVDAWKDINEACLHPIDVPMPILMRVVNVSRFIEVLYFDKDGYTNANGRT 120
           EEA  +LH+ V D  K +NE  L PI+VP  +L  V++  R I + Y ++DG+T  NG  
Sbjct: 533 EEAFRKLHQMVADGDKMMNEEFLKPINVPHQVLKAVLDTLRAINICYDNEDGFTRLNGNL 592

Query: 121 KFLIKSLLVN 131
           K  I S+ V+
Sbjct: 593 KNYITSMYVD 602

[Close]

BLAST of CmaCh16G008240 vs. TAIR10
Match: AT1G31950.1 (AT1G31950.1 Terpenoid cyclases/Protein prenyltransferases superfamily protein)

HSP 1 Score: 94.4 bits (233), Expect = 6.0e-20
Identity = 49/133 (36.84%), Postives = 78/133 (58.65%), Query Frame = 1


Query: 1   MGDIVTNEIIEWFSRRPKVIKTATIIGRLMDDLVSHKFEQQREHVASGVQCYMEQYGCLE 60
           M DI   E  EW +  P +IK  T + RL +D+ +++ E  R  VA+G+ CYM+QYG  +
Sbjct: 471 MEDINEKEAFEWLNSNPLIIKHLTAMFRLANDVGTYETEINRGEVANGLNCYMKQYGVTK 530

Query: 61  EEACVELHKQVVDAWKDINEACLHPID-VPMPILMRVVNVSRFIEVLYFDKDGYTNANGR 120
           EEA  EL K  V   K + E  ++  D VP  +L+R +N++R  +V Y + DGY+   G+
Sbjct: 531 EEASRELRKMYVYRKKVVVEEFMNSHDHVPRQVLLRCLNIARIFDVFYTEGDGYSEPKGK 590

Query: 121 TKFLIKSLLVNPM 133
            +  + SL ++P+
Sbjct: 591 IEHFMTSLYLHPI 603

[Close]

BLAST of CmaCh16G008240 vs. TAIR10
Match: AT4G20210.1 (AT4G20210.1 Terpenoid cyclases/Protein prenyltransferases superfamily protein)

HSP 1 Score: 94.0 bits (232), Expect = 7.8e-20
Identity = 48/132 (36.36%), Postives = 74/132 (56.06%), Query Frame = 1


Query: 1   MGDIVTNEIIEWFSRRPKVIKTATIIGRLMDDLVSHKFEQQREHVASGVQCYMEQYGCLE 60
           +G I    + EW   RPK +K A+  GRLM+D+   + + +RE+V +GV  YM+QYG  +
Sbjct: 467 IGHIGDEGVYEWLKSRPKFLKAASTYGRLMNDIAGFEDDMKREYVITGVNTYMKQYGLTK 526

Query: 61  EEACVELHKQVVDAWKDINEACLHPIDVPMPILMRVVNVSRFIEVLYFDKDGYTNANGRT 120
            EA  EL   V      +NE  L   D+P  I  +V+NV+R + V Y + +G+T+  G+ 
Sbjct: 527 MEAIRELQNLVEYNHTIMNEEFLKTTDLPRQIRKQVINVARSLNVSYTEGEGFTHTKGKV 586

Query: 121 KFLIKSLLVNPM 133
              I SL + P+
Sbjct: 587 DEYITSLFITPI 598

[Close]

BLAST of CmaCh16G008240 vs. NCBI nr
Match: gi|778676208|ref|XP_011650545.1| (PREDICTED: (+)-gamma-cadinene synthase [Cucumis sativus])

HSP 1 Score: 196.4 bits (498), Expect = 3.2e-47
Identity = 91/133 (68.42%), Postives = 111/133 (83.46%), Query Frame = 1


Query: 1   MGD-IVTNEIIEWFSRRPKVIKTATIIGRLMDDLVSHKFEQQREHVASGVQCYMEQYGCL 60
           +GD IVTNE+++W S  P++IK +TII RLMDD+ SHKFEQ+REHVAS V+ YMEQY C 
Sbjct: 424 LGDHIVTNEVLQWLSNGPQIIKASTIICRLMDDIASHKFEQEREHVASAVESYMEQYDCS 483

Query: 61  EEEACVELHKQVVDAWKDINEACLHPIDVPMPILMRVVNVSRFIEVLYFDKDGYTNANGR 120
           EEEACVELHK+VVDAWKD NEA   P +VP+P+LMRV+N SR + +LY D+DGYTNA  R
Sbjct: 484 EEEACVELHKEVVDAWKDTNEAFYRPFNVPLPVLMRVLNFSRVMNLLYLDEDGYTNAKSR 543

Query: 121 TKFLIKSLLVNPM 133
           TKFLIKSLLV+P+
Sbjct: 544 TKFLIKSLLVDPL 556

[Close]

BLAST of CmaCh16G008240 vs. NCBI nr
Match: gi|661902982|ref|NP_001284382.1| ((+)-gamma-cadinene synthase [Cucumis melo])

HSP 1 Score: 196.4 bits (498), Expect = 3.2e-47
Identity = 90/133 (67.67%), Postives = 111/133 (83.46%), Query Frame = 1


Query: 1   MGD-IVTNEIIEWFSRRPKVIKTATIIGRLMDDLVSHKFEQQREHVASGVQCYMEQYGCL 60
           +GD IVTNE+++W S  P++IK +TII RLMDD+ SHKFEQ+REHVAS V+CYM+QY C 
Sbjct: 437 LGDHIVTNEVLQWLSNGPQIIKASTIICRLMDDIASHKFEQEREHVASAVECYMKQYDCS 496

Query: 61  EEEACVELHKQVVDAWKDINEACLHPIDVPMPILMRVVNVSRFIEVLYFDKDGYTNANGR 120
           EEEAC+ELHK+VVDAWKD NEA   P +VP+P+LMRV+N SR I +LY D+DGYTNA   
Sbjct: 497 EEEACIELHKEVVDAWKDTNEAFYRPFNVPVPVLMRVLNFSRVINLLYLDEDGYTNAKSG 556

Query: 121 TKFLIKSLLVNPM 133
           TKFLIKSLLV+P+
Sbjct: 557 TKFLIKSLLVDPL 569

[Close]

BLAST of CmaCh16G008240 vs. NCBI nr
Match: gi|659102820|ref|XP_008452330.1| (PREDICTED: (+)-gamma-cadinene synthase-like [Cucumis melo])

HSP 1 Score: 177.6 bits (449), Expect = 1.5e-41
Identity = 78/134 (58.21%), Postives = 104/134 (77.61%), Query Frame = 1


Query: 1   MGDIVTNEIIEWFSRRPKVIKTATIIGRLMDDLVSHKFEQQREHVASGVQCYMEQYGCLE 60
           MGDI T EI +W    PK++K +T I RLMDD+VS+KFE++REHV S V+CYM  YGC E
Sbjct: 437 MGDIATEEIFDWLFDCPKILKASTTISRLMDDVVSYKFEKEREHVVSAVECYMNNYGCSE 496

Query: 61  EEACVELHKQVVDAWKDINEACLHPIDVPMPILMRVVNVSRFIEVLYFDKDGYTNANGRT 120
           EE C  L KQV DAWK+IN+ CLHP+ VP+P L+ V+N++R + +LY D+DGYTN+ GRT
Sbjct: 497 EETCANLLKQVKDAWKNINKCCLHPMTVPVPFLVCVLNLTRVMALLYSDEDGYTNSKGRT 556

Query: 121 KFLIKSLLVNPMLM 135
           K LI+SLL++P+ +
Sbjct: 557 KLLIQSLLIDPLYL 570

[Close]

BLAST of CmaCh16G008240 vs. NCBI nr
Match: gi|745672488|gb|AJD19682.1| (sesquiterpene synthase Tps1 [Cucumis melo])

HSP 1 Score: 176.0 bits (445), Expect = 4.4e-41
Identity = 78/134 (58.21%), Postives = 103/134 (76.87%), Query Frame = 1


Query: 1   MGDIVTNEIIEWFSRRPKVIKTATIIGRLMDDLVSHKFEQQREHVASGVQCYMEQYGCLE 60
           MGDI T EI +W    PK++K +T I RLMDD+VS+KFE++REHV S V+CYM  YGC E
Sbjct: 437 MGDIATKEIFDWLFDCPKILKASTTISRLMDDVVSYKFEKEREHVVSAVECYMNNYGCSE 496

Query: 61  EEACVELHKQVVDAWKDINEACLHPIDVPMPILMRVVNVSRFIEVLYFDKDGYTNANGRT 120
           EE C +L KQV DAWK IN+ CLHP+ VP+P L+ V+N++R + +LY  +DGYTN+ GRT
Sbjct: 497 EETCADLLKQVEDAWKTINKCCLHPMTVPIPFLICVLNLTRVMALLYSGEDGYTNSKGRT 556

Query: 121 KFLIKSLLVNPMLM 135
           K LI+SLL++P+ M
Sbjct: 557 KLLIQSLLIDPLYM 570

[Close]

BLAST of CmaCh16G008240 vs. NCBI nr
Match: gi|700201056|gb|KGN56189.1| (hypothetical protein Csa_3G097040 [Cucumis sativus])

HSP 1 Score: 171.4 bits (433), Expect = 1.1e-39
Identity = 75/132 (56.82%), Postives = 102/132 (77.27%), Query Frame = 1


Query: 1   MGDIVTNEIIEWFSRRPKVIKTATIIGRLMDDLVSHKFEQQREHVASGVQCYMEQYGCLE 60
           MGDI T E+ EW    PK++K +T I RLMDD+VS+KFE++REH+ S V+CYM  +G  E
Sbjct: 434 MGDIATKEVFEWLFDCPKILKASTTISRLMDDVVSYKFEKEREHIVSAVECYMSNHGRSE 493

Query: 61  EEACVELHKQVVDAWKDINEACLHPIDVPMPILMRVVNVSRFIEVLYFDKDGYTNANGRT 120
           +E C EL KQV DAWK INE CLHP++VPMP L+ ++N++R + +LY  +DGYTN+ GRT
Sbjct: 494 DETCAELLKQVEDAWKTINECCLHPMNVPMPFLICLLNLTRVMALLYSHEDGYTNSKGRT 553

Query: 121 KFLIKSLLVNPM 133
           K LI+SLL++P+
Sbjct: 554 KLLIQSLLIDPL 565

The following BLAST results are available for this feature:

BLAST of CmaCh16G008240 vs. Swiss-Prot


Match Name	E-value	Identity	Description
GCSY1_CUCME	2.0e-49	67.67	(+)-gamma-cadinene synthase OS=Cucumis melo PE=1 SV=1	[more]
SAUST_SANAS	3.9e-37	52.99	Probable sesquiterpene synthase OS=Santalum austrocaledonicum GN=SesquiTPS PE=3 ...	[more]
STPS1_SANAL	6.6e-37	52.99	Sesquiterpene synthase OS=Santalum album PE=1 SV=1	[more]
SMST_SANMU	2.5e-36	51.49	Probable sesquiterpene synthase OS=Santalum murrayanum GN=STPS PE=3 SV=1	[more]
SAST_SANAL	3.3e-36	51.49	Probable sesquiterpene synthase OS=Santalum album GN=SesquiTPS1 PE=3 SV=1	[more]

BLAST of CmaCh16G008240 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L2I8_CUCSA	2.2e-47	68.42	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G097540 PE=3 SV=1	[more]
A0A0B4VEV4_CUCME	3.1e-41	58.21	Sesquiterpene synthase Tps1 OS=Cucumis melo PE=2 SV=1	[more]
A0A0A0L579_CUCSA	7.6e-40	56.82	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G097040 PE=3 SV=1	[more]
Q66PX8_CUCSA	2.2e-39	56.06	Beta-caryophyllene synthase OS=Cucumis sativus PE=2 SV=1	[more]
A0A067L4J4_JATCU	8.4e-39	57.89	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00771 PE=4 SV=1	[more]

BLAST of CmaCh16G008240 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G23960.1	2.5e-26	41.41	terpene synthase 21	[more]
AT4G20200.1	2.9e-22	39.23	Terpenoid cyclases/Protein prenyltransferases superfamily protein	[more]
AT1G48800.1	7.1e-21	37.69	Terpenoid cyclases/Protein prenyltransferases superfamily protein	[more]
AT1G31950.1	6.0e-20	36.84	Terpenoid cyclases/Protein prenyltransferases superfamily protein	[more]
AT4G20210.1	7.8e-20	36.36	Terpenoid cyclases/Protein prenyltransferases superfamily protein	[more]

BLAST of CmaCh16G008240 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778676208\|ref\|XP_011650545.1\|	3.2e-47	68.42	PREDICTED: (+)-gamma-cadinene synthase [Cucumis sativus]	[more]
gi\|661902982\|ref\|NP_001284382.1\|	3.2e-47	67.67	(+)-gamma-cadinene synthase [Cucumis melo]	[more]
gi\|659102820\|ref\|XP_008452330.1\|	1.5e-41	58.21	PREDICTED: (+)-gamma-cadinene synthase-like [Cucumis melo]	[more]
gi\|745672488\|gb\|AJD19682.1\|	4.4e-41	58.21	sesquiterpene synthase Tps1 [Cucumis melo]	[more]
gi\|700201056\|gb\|KGN56189.1\|	1.1e-39	56.82	hypothetical protein Csa_3G097040 [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR005630	Terpene_synthase_metal-bd
IPR008949	Isoprenoid_synthase_dom_sf

Vocabulary: **Molecular Function**
Term	Definition
GO:0000287	magnesium ion binding
GO:0010333	terpene synthase activity
GO:0016829	lyase activity

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045338	farnesyl diphosphate metabolic process
biological_process	GO:0051762	sesquiterpene biosynthetic process
biological_process	GO:0016114	terpenoid biosynthetic process
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0047461	(+)-delta-cadinene synthase activity
molecular_function	GO:0000287	magnesium ion binding
molecular_function	GO:0016829	lyase activity
molecular_function	GO:0010333	terpene synthase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh16G008240.1	CmaCh16G008240.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005630	Terpene synthase, metal-binding domain	PFAM	PF03936	Terpene_synth_C	coord: 1..77 score: 1.3
IPR008949	Isoprenoid synthase domain	GENE3D	G3DSA:1.10.600.10		coord: 1..132 score: 1.2
IPR008949	Isoprenoid synthase domain	unknown	SSF48576	Terpenoid synthases	coord: 1..132 score: 6.62
None	No IPR available	PANTHER	PTHR31225	FAMILY NOT NAMED	coord: 1..134 score: 3.2
None	No IPR available	PANTHER	PTHR31225:SF15	ALPHA-HUMULENE/(-)-(E)-BETA-CARYOPHYLLENE SYNTHASE	coord: 1..134 score: 3.2

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh16G008240	MELO3C016586	Melon (DHL92) v3.5.1	cmameB292
CmaCh16G008240	Bhi11G000589	Wax gourd	cmawgoB0417

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh16G008240	Cucurbita pepo (Zucchini)	cmacpeB337
CmaCh16G008240	Cucurbita pepo (Zucchini)	cmacpeB350
CmaCh16G008240	Cucurbita pepo (Zucchini)	cmacpeB356
CmaCh16G008240	Cucurbita pepo (Zucchini)	cmacpeB362
CmaCh16G008240	Bottle gourd (USVL1VR-Ls)	cmalsiB315
CmaCh16G008240	Cucumber (Gy14) v2	cgybcmaB084
CmaCh16G008240	Cucumber (Gy14) v2	cgybcmaB341
CmaCh16G008240	Melon (DHL92) v3.6.1	cmamedB330
CmaCh16G008240	Melon (DHL92) v3.6.1	cmamedB345
CmaCh16G008240	Silver-seed gourd	carcmaB0946
CmaCh16G008240	Silver-seed gourd	carcmaB1243
CmaCh16G008240	Cucumber (Chinese Long) v3	cmacucB0371
CmaCh16G008240	Cucumber (Chinese Long) v3	cmacucB0382
CmaCh16G008240	Watermelon (97103) v2	cmawmbB336
CmaCh16G008240	Watermelon (97103) v2	cmawmbB343
CmaCh16G008240	Wax gourd	cmawgoB0421
CmaCh16G008240	Cucurbita maxima (Rimu)	cmacmaB041
CmaCh16G008240	Cucurbita maxima (Rimu)	cmacmaB339
CmaCh16G008240	Cucurbita maxima (Rimu)	cmacmaB350
CmaCh16G008240	Cucumber (Gy14) v1	cgycmaB0121
CmaCh16G008240	Cucumber (Gy14) v1	cgycmaB0337
CmaCh16G008240	Cucurbita moschata (Rifu)	cmacmoB317
CmaCh16G008240	Cucurbita moschata (Rifu)	cmacmoB324
CmaCh16G008240	Cucurbita moschata (Rifu)	cmacmoB328
CmaCh16G008240	Cucurbita moschata (Rifu)	cmacmoB337
CmaCh16G008240	Wild cucumber (PI 183967)	cmacpiB324
CmaCh16G008240	Wild cucumber (PI 183967)	cmacpiB334
CmaCh16G008240	Cucumber (Chinese Long) v2	cmacuB318
CmaCh16G008240	Cucumber (Chinese Long) v2	cmacuB328
CmaCh16G008240	Watermelon (Charleston Gray)	cmawcgB283
CmaCh16G008240	Watermelon (Charleston Gray)	cmawcgB294
CmaCh16G008240	Watermelon (Charleston Gray)	cmawcgB298
CmaCh16G008240	Watermelon (97103) v1	cmawmB306