CmaCh16G000640.1 (mRNA) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh16G000640.1
Type	mRNA
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Cyclic nucleotide-gated ion channel-like protein
Location	Cma_Chr16 : 278135 .. 280291 (-)
Sequence length	1048

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGCTGCATTCATGATGTACAACCAACCAAGGGGGATTGCTTTAATGGCGGACGAAGGCATGGCTTGGGTACTGGAGGATGGTGTTATAAGGATATTCATCCTGTTTTCAGCAAGAAAGAGCTCGTATCGCTTGGATGGAGAAAATGGTGCCATACGGTTAGTTCTTTTGTTCTTAATTTGAACTCTTAGCATCGCAACTATGCCTGGAATGTTGTTTGATTACTACATTTGGAGTAGCCTTTGTATCTCATGAATATGTTCGACTTCCTCTCATTCTTTTACTGCCTTTGGAATTTCTGATGTAGCCGTTGGGGTTTATTGGGTGTTGGGACGAGGTTCGCTTGGTTTCTCCTTTAGGAAAAAATACAAAGTTTAGTTTCTTTACCATTTGTGCTTCCCTAAGTGTATTTTTAGTGGGTCACTGCACTTTCAAGCCTCTGATACTAATGTTAGGAACTACGGATATCTATGATATTGTTCACTTTAAGCATAAACTCTCGTAGTTTTACTCCTCGTACCCACAGAGATATATTTCTTATGATCATTCTCTATGTCTCTGATGCTATGCTAGTTTCGTATGCTGATTTAAGATGTGATTTGTTTAGGATTCAGTCTTGCTCTCGCGAACATGTGGCTGAGAGACCTTCTGGAAAGATTCATTGTTTAAAAAAAGAGATGAGTAAAGGGTTGAGGTTTATAAAAAAGTGCATTGGAGAGCTTCATGTGTGGAATGTAGTAGTTGTGATATTGTAGCTGCGATCCAACTGGACCCTTTGTTCTGTTACATCTTAGTAGTTGATGAAAAGAAAAATTGTATTGAGTTTGACCAGAAGTTGCGGATCACGGCTATAGTTTTGCGTTCGCTCATTGATTTTGGCTACATTTTTCTAATAGCCTTTCATTTTCGCATCGGTTATACTGGGCCCTACGATGCAAAAAAGGAAACGCTTTACAAAATAGGCAGCTACTTTACTGTTGACATTCTTGCCGCCTTCCTCTCCCACAGGTTTGGACTATTAATCTCTGCCTAAGTGATGAATTTGGAACATTGATGTTCTATAACATGTGAGGAATCGCTTGTGCAGGTGGTGAATCTATTAGTCATTCCAGCAGCAACAAAAGGCTCTCATTTTAGCATGGCTCTGAGGCCATTGCAGTTTGTTCTTATAATTCAACATTTGCCAAGGGCGTTACGGATATACAAATTCTTAAAGAAAGTTAGATTGAGTTCTAGCCTTTTTCCCAATTCTACTCGGGGCAATGCTATATTCAATCTCTTCCTGTATATGCTTTCAAGTCATGTAAGTTCATCAAGTCGTTAAGGATTCATCTCATCATCTGTTGTATTCAGTTCAAAATGAGAGGGTTATTGACATTATACAAAATATGCTCTCAGTCTTCAGAACTTGTGTACTCTTTCATTGCCTTTGCCTTTATCTTAGCATTAACTCAGTATGTATCTGATCCTTCCAGGCCTTTGGAGCCTTTTGGTACCTGTTTGCTATTGAGCGTAAAGCAAATTTCCTGCAGAAAAGGTGTGGCACTGATCCATATTGCCCTCGGATACATAACCTCAAATGACAAAACAGCTTTCAATTTTGGAATATTTGATGATGCCTTAACTTCTGGCGTTGTCTATTCAACTGATTTGATATGTAAGCTCTGTTATTGTTGCTGGTGGGGTCTGCAGAATCTAAGGTCTGTATTCCAAAAACCCCACGTATTCTGCATTACTGTGTTACGTCTCTACCCATAATCTACGTTTACATCTAACTTTTTTCAGTTCTTTGGGACAAGGCCTCAAAACTAGTCAGCATATATGGGAAATTTCCTTTGGGAGCAATGATAGGCCTGGACAATGATAGGCAATGATAGGCCTGGACAATAATAAGTGGGAGCAATGATAGGCCTGGACATAGCATCAACACCAATGGGTTGCCATAAGGTACCAACTCCTAATGGAAACTCTTTCTATTGAGTCCTGCCATCTCTTTCTATTTAGTATATCAGCACATTCGAAACATGGACTAATTTTGTCGTGTGTTAGTAGTACTATTTAAACACTTTTAAAATCATTGCATCAGTGTATCAATAGTTTATCATAATTTAGTATATATAAGCACTTTTTAAGTATTCTTAATAACCTTTCCTCTG

mRNA sequence

ATGGGCTGCATTCATGATGTACAACCAACCAAGGGGGATTGCTTTAATGGCGGACGAAGGCATGGCTTGGGTACTGGAGGATGGTGTTATAAGGATATTCATCCTGTTTTCAGCAAGAAAGAGCTCGTATCGCTTGGATGGAGAAAATGGTGCCATACGGTGGTGAATCTATTAGTCATTCCAGCAGCAACAAAAGGCTCTCATTTTAGCATGGCTCTGAGGCCATTGCAGTTTGTTCTTATAATTCAACATTTGCCAAGGGCGTTACGGATATACAAATTCTTAAAGAAAGTTAGATTGAGTTCTAGCCTTTTTCCCAATTCTACTCGGGGCAATGCTATATTCAATCTCTTCCTGTATATGCTTTCAAGTCATTCTTCAGAACTTGTGTACTCTTTCATTGCCTTTGCCTTTATCTTAGCATTAACTCAGTATGTATCTGATCCTTCCAGGCCTTTGGAGCCTTTTGGTACCTGTTTGCTATTGAGCGTAAAGCAAATTTCCTGCAGAAAAGGTGTGGCACTGATCCATATTGCCCTCGGATACATAACCTCAAATGACAAAACAGCTTTCAATTTTGGAATATTTGATGATGCCTTAACTTCTGGCGTTGTCTATTCAACTGATTTGATATGTAAGCTCTGTTATTGTTGCTGGTGGGGTCTGCAGAATCTAAGTTCTTTGGGACAAGGCCTCAAAACTAGTCAGCATATATGGGAAATTTCCTTTGGGAGCAATGATAGGCCTGGACAATGATAGGCAATGATAGGCCTGGACAATAATAAGTGGGAGCAATGATAGGCCTGGACATAGCATCAACACCAATGGGTTGCCATAAGGTACCAACTCCTAATGGAAACTCTTTCTATTGAGTCCTGCCATCTCTTTCTATTTAGTATATCAGCACATTCGAAACATGGACTAATTTTGTCGTGTGTTAGTAGTACTATTTAAACACTTTTAAAATCATTGCATCAGTGTATCAATAGTTTATCATAATTTAGTATATATAAGCACTTTTTAAGTATTCTTAATAACCTTTCCTCTG

Coding sequence (CDS)

ATGGGCTGCATTCATGATGTACAACCAACCAAGGGGGATTGCTTTAATGGCGGACGAAGGCATGGCTTGGGTACTGGAGGATGGTGTTATAAGGATATTCATCCTGTTTTCAGCAAGAAAGAGCTCGTATCGCTTGGATGGAGAAAATGGTGCCATACGGTGGTGAATCTATTAGTCATTCCAGCAGCAACAAAAGGCTCTCATTTTAGCATGGCTCTGAGGCCATTGCAGTTTGTTCTTATAATTCAACATTTGCCAAGGGCGTTACGGATATACAAATTCTTAAAGAAAGTTAGATTGAGTTCTAGCCTTTTTCCCAATTCTACTCGGGGCAATGCTATATTCAATCTCTTCCTGTATATGCTTTCAAGTCATTCTTCAGAACTTGTGTACTCTTTCATTGCCTTTGCCTTTATCTTAGCATTAACTCAGTATGTATCTGATCCTTCCAGGCCTTTGGAGCCTTTTGGTACCTGTTTGCTATTGAGCGTAAAGCAAATTTCCTGCAGAAAAGGTGTGGCACTGATCCATATTGCCCTCGGATACATAACCTCAAATGACAAAACAGCTTTCAATTTTGGAATATTTGATGATGCCTTAACTTCTGGCGTTGTCTATTCAACTGATTTGATATGTAAGCTCTGTTATTGTTGCTGGTGGGGTCTGCAGAATCTAAGTTCTTTGGGACAAGGCCTCAAAACTAGTCAGCATATATGGGAAATTTCCTTTGGGAGCAATGATAGGCCTGGACAATGA

Protein sequence

MGCIHDVQPTKGDCFNGGRRHGLGTGGWCYKDIHPVFSKKELVSLGWRKWCHTVVNLLVIPAATKGSHFSMALRPLQFVLIIQHLPRALRIYKFLKKVRLSSSLFPNSTRGNAIFNLFLYMLSSHSSELVYSFIAFAFILALTQYVSDPSRPLEPFGTCLLLSVKQISCRKGVALIHIALGYITSNDKTAFNFGIFDDALTSGVVYSTDLICKLCYCCWWGLQNLSSLGQGLKTSQHIWEISFGSNDRPGQ

Homology

[Close]

BLAST of CmaCh16G000640.1 vs. Swiss-Prot
Match: CNGC1_ARATH (Cyclic nucleotide-gated ion channel 1 OS=Arabidopsis thaliana GN=CNGC1 PE=1 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 9.0e-24
Identity = 78/194 (40.21%), Postives = 107/194 (55.15%), Query Frame = 1


Query: 54  VVNLLVIPAATKGSHFSMALRPLQFVLIIQHLPRALRIYKFLKKVRLSSSLFPNSTRGNA 113
           +V L++IP   +GS        L+F++  Q++PR +RIY   K+V  +S +   +    A
Sbjct: 201 MVILIIIPHM-RGSSSLNTKNMLKFIVFFQYIPRFIRIYPLYKEVTRTSGILTETAWAGA 260

Query: 114 IFNLFLYMLSSHSSELVYSFIAFAFILALTQ----YVSDPSRPLEPFGTCLLLSVKQISC 173
            FNLFLYML+SH       F AF ++ ++ +    +     R   P  + LL    + + 
Sbjct: 261 AFNLFLYMLASH------VFGAFWYLFSIERETVCWKQACERNNPPCISKLLYCDPETA- 320

Query: 174 RKGVALIHIALGYITSNDKTAFNFGIFDDALTSGVVYSTDLICKLCYCCWWGLQNLSSLG 233
             G A ++ +    T N  T F+FGIF DAL SGVV S D   K  YC WWGLQNLSSLG
Sbjct: 321 -GGNAFLNESCPIQTPN-TTLFDFGIFLDALQSGVVESQDFPQKFFYCFWWGLQNLSSLG 380

Query: 234 QGLKTSQHIWEISF 244
           Q LKTS +IWEI F
Sbjct: 381 QNLKTSTYIWEICF 384

[Close]

BLAST of CmaCh16G000640.1 vs. Swiss-Prot
Match: CNGC5_ARATH (Probable cyclic nucleotide-gated ion channel 5 OS=Arabidopsis thaliana GN=CNGC5 PE=2 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 5.1e-19
Identity = 64/193 (33.16%), Postives = 100/193 (51.81%), Query Frame = 1


Query: 63  ATKGSHFSMALRPLQFVLIIQHLPRALRIYKFLKKVRLSSSLFPNSTRGNAIFNLFLYML 122
           ++ GS      + L F++++Q++PR LR+     +++ ++ +F  +    A + L LYML
Sbjct: 213 SSNGSDVLATKQALLFIVLVQYIPRFLRVLPLTSELKRTAGVFAETAWAGAAYYLLLYML 272

Query: 123 SSHSSELVYSFIAFAFILALTQYVSDPSRPLEPFGTCLLLSVKQISCRK----GVALIHI 182
           +SH         AF ++LAL +  +         G C   S   + C      G A+ + 
Sbjct: 273 ASHIVG------AFWYLLALERNDACWQEACIDAGNC---STDFLYCGNQNMDGYAVWNR 332

Query: 183 ALGYITSNDKTA--------FNFGIFDDALTSGVVYSTDLICKLCYCCWWGLQNLSSLGQ 242
           A   +  +   A        F+FGI+  AL+SG+V S + I K CYC WWGLQNLS+LGQ
Sbjct: 333 AKESVLKSKCRADLDDNNPPFDFGIYTQALSSGIVSSQNFIVKYCYCLWWGLQNLSTLGQ 392

Query: 243 GLKTSQHIWEISF 244
           GL+TS +  EI F
Sbjct: 393 GLETSTYPMEIIF 396

[Close]

BLAST of CmaCh16G000640.1 vs. Swiss-Prot
Match: CNGC3_ARATH (Probable cyclic nucleotide-gated ion channel 3 OS=Arabidopsis thaliana GN=CNGC3 PE=2 SV=2)

HSP 1 Score: 95.5 bits (236), Expect = 8.7e-19
Identity = 75/206 (36.41%), Postives = 98/206 (47.57%), Query Frame = 1


Query: 54  VVNLLVIPAATKGSHFSMALRPLQFVLIIQHLPRALRIYKFLKKVRLSSSLFPNSTRGNA 113
           VV L ++P   + +   +A   L++V+  Q++PR  RIY   K+V  +S L   +    A
Sbjct: 189 VVVLAIVPRMRRPASL-VAKELLKWVIFCQYVPRIARIYPLFKEVTRTSGLVTETAWAGA 248

Query: 114 IFNLFLYMLSSHSSELVYSFI-----------AFAFILALTQ---YVSDPSRPLEPF--G 173
             NLFLYML+SH     +  I           A A I   T    Y S        F  G
Sbjct: 249 ALNLFLYMLASHVFGSFWYLISIERKDRCWREACAKIQNCTHAYLYCSPTGEDNRLFLNG 308

Query: 174 TCLLLSVKQISCRKGVALIHIALGYITSNDKTAFNFGIFDDALTSGVVYSTDLICKLCYC 233
           +C L+  ++I+                  + T FNFGIF DAL SGVV S D   K  YC
Sbjct: 309 SCPLIDPEEIT------------------NSTVFNFGIFADALQSGVVESRDFPKKFFYC 368

Query: 234 CWWGLQNLSSLGQGLKTSQHIWEISF 244
            WWGL+NLS+LGQ LKTS    EI F
Sbjct: 369 FWWGLRNLSALGQNLKTSAFEGEIIF 375

[Close]

BLAST of CmaCh16G000640.1 vs. Swiss-Prot
Match: CNG10_ARATH (Probable cyclic nucleotide-gated ion channel 10 OS=Arabidopsis thaliana GN=CNGC10 PE=2 SV=2)

HSP 1 Score: 93.2 bits (230), Expect = 4.3e-18
Identity = 67/200 (33.50%), Postives = 104/200 (52.00%), Query Frame = 1


Query: 54  VVNLLVIPAATKGSHFSMALRPLQFVLIIQHLPRALRIYKFLKKVRLSSSLFPNSTRGNA 113
           +V L VIP+  +     +    L+F +I Q++PR LR+Y    +V  +S +   +    A
Sbjct: 185 IVVLAVIPSVNQPVSL-LTKDYLKFSIIAQYVPRILRMYPLYTEVTRTSGIVTETAWAGA 244

Query: 114 IFNLFLYMLSSHSSELVYSFIAFAFILALTQYVSDPSRPLEPFGTCLLLSVKQISCRKGV 173
            +NL LYML+SH       F A  +++++ +         E    C   ++K + C    
Sbjct: 245 AWNLSLYMLASHV------FGALWYLISVEREDRCWQEACEKTKGC---NMKFLYCENDR 304

Query: 174 ALIHIALGYITSN----------DKTAFNFGIFDDALTSGVVYSTDLICKLCYCCWWGLQ 233
              +++  ++T++          + T FNFGIF DAL SGVV S D   K  YC WWGL+
Sbjct: 305 ---NVSNNFLTTSCPFLDPGDITNSTIFNFGIFTDALKSGVVESHDFWKKFFYCFWWGLR 364

Query: 234 NLSSLGQGLKTSQHIWEISF 244
           NLS+LGQ L+TS+ + EI F
Sbjct: 365 NLSALGQNLQTSKFVGEIIF 371

[Close]

BLAST of CmaCh16G000640.1 vs. Swiss-Prot
Match: CNGC9_ARATH (Putative cyclic nucleotide-gated ion channel 9 OS=Arabidopsis thaliana GN=CNGC9 PE=2 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 2.8e-17
Identity = 57/195 (29.23%), Postives = 101/195 (51.79%), Query Frame = 1


Query: 64  TKGSHFSMALRPLQFVLIIQHLPRALRIYKFLKKVRLSSSLFPNSTRGNAIFNLFLYMLS 123
           +KG+      R L+ ++++Q++PR +R+Y    +++ ++ +F  +    A + L LYML+
Sbjct: 229 SKGASVLATKRALRSIILVQYIPRFIRLYPLSSELKRTAGVFAETAWAGAAYYLLLYMLA 288

Query: 124 SHSSELVYSFIAFA-FILALTQYVSDPS------------RPLEPFG--TCLLLSVKQIS 183
           SH    ++  +A   +    T+  S+ S              ++ +   T +  SV Q++
Sbjct: 289 SHIVGAIWYLLALERYNGCWTKVCSNSSLDCHRNFLFCGNEKMDGYAAWTTIKDSVLQLN 348

Query: 184 CRKGVALIHIALGYITSNDKTAFNFGIFDDALTSGVVYSTDLICKLCYCCWWGLQNLSSL 243
           C             + + D   F+FGI+  AL+SG+V S   + K  +C WWGLQNLS+L
Sbjct: 349 CP------------VNTTDNPPFDFGIYLRALSSGIVSSKSFVSKYFFCLWWGLQNLSTL 408

[Close]

BLAST of CmaCh16G000640.1 vs. TrEMBL
Match: A0A0A0L8K4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G607120 PE=4 SV=1)

HSP 1 Score: 156.0 bits (393), Expect = 6.1e-35
Identity = 91/189 (48.15%), Postives = 116/189 (61.38%), Query Frame = 1


Query: 55  VNLLVIPAATKGSHFSMALRPLQFVLIIQHLPRALRIYKFLKKVRLSSSLFPNSTRGNAI 114
           V +L++   TK SH + ALR L+F+LI Q+ PR  R+Y FLKKVR SS + P+S    A+
Sbjct: 182 VVILIVTQGTKASHLT-ALRSLKFILIFQYFPRVSRVYLFLKKVRWSSGILPDSAGVKAL 241

Query: 115 FNLFLYMLSSHSSELVYSFIAFAFILALTQYVSDPSRPLEPFGTCLLLSVKQISCRKGVA 174
           FNLFLYML+SH+      F AF ++ ++ +  S           C  ++      R   +
Sbjct: 242 FNLFLYMLASHA------FGAFWYLFSVERKASCVQIRCNSHPYCSRMNNNSSFER---S 301

Query: 175 LIHIALGYITSNDKTAFNFGIFDDALTSGVVYSTDLICKLCYCCWWGLQNLSSLGQGLKT 234
            I+       SN  TA ++GIFDDAL SGVV STD I K  YCCWWGLQNLSSLGQGLKT
Sbjct: 302 CINDVCSGTASNVTTALDYGIFDDALNSGVVSSTDFIWKFSYCCWWGLQNLSSLGQGLKT 360

Query: 235 SQHIWEISF 244
           S+ IWEI F
Sbjct: 362 SKDIWEIYF 360

[Close]

BLAST of CmaCh16G000640.1 vs. TrEMBL
Match: A0A0A0LDV9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G607130 PE=4 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 9.4e-28
Identity = 84/191 (43.98%), Postives = 108/191 (56.54%), Query Frame = 1


Query: 54  VVNLLVIPAATKGSHFSMALRPLQFVLIIQHLPRALRIYKFLKKVRLSSSLFPNSTRGNA 113
           VV L++IP+  +G+ F  A+R L+++LI+Q+LPR  RIY FLKKVR +SS+ P S    A
Sbjct: 186 VVVLILIPSL-RGNGFIYAVRSLKYILIVQYLPRVFRIYSFLKKVRWTSSILPESAGAKA 245

Query: 114 IFNLFLYMLSSH-SSELVYSFIAFAFILALTQYVSDPSRPLEPFGTCLLLSVKQISCRKG 173
           +FNLFLYML+SH      Y F          +  ++ S      G    LSV  I   K 
Sbjct: 246 VFNLFLYMLASHVIGAFWYLFTIERKTTCWEENYTNWSLNCNYVGN---LSVDTICSPK- 305

Query: 174 VALIHIALGYITSNDKTAFNFGIFDDALTSGVVYSTDLICKLCYCCWWGLQNLSSLGQGL 233
                        ND  +FNFGIF DAL   +V S +++ K   C WWGLQ LSSLGQ L
Sbjct: 306 -----------AENDSNSFNFGIFKDALP--IVGSREIVKKFSLCFWWGLQKLSSLGQDL 358

Query: 234 KTSQHIWEISF 244
           KTS H+WEI F
Sbjct: 366 KTSNHLWEIYF 358

[Close]

BLAST of CmaCh16G000640.1 vs. TrEMBL
Match: E0CUJ3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_16s0050g02560 PE=4 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 2.0e-22
Identity = 77/192 (40.10%), Postives = 106/192 (55.21%), Query Frame = 1


Query: 54  VVNLLVIPAATKGSHFSMALRPLQFVLIIQHLPRALRIYKFLKKVRLSSSLFPNSTRGNA 113
           VV  ++IP    GS +    R L+FV+  Q++PR LR+    K+V  +S +   +    A
Sbjct: 198 VVIWIIIPKLG-GSKYMNTKRLLKFVVFFQYIPRVLRVRPLYKEVTRTSGILTETAWAGA 257

Query: 114 IFNLFLYMLSSHSSELVYSFIAFAFILALTQYVSDPSRPLEPFGTCLLLSVKQISCRKGV 173
            FNLFLYML+SH         AF ++ A+ +  +  ++      +C+  S   + C+  V
Sbjct: 258 AFNLFLYMLASHVLG------AFWYLFAIDRETTCWTKACGNDTSCIDSS---LYCKGTV 317

Query: 174 --ALIHIALGYITSNDKTAFNFGIFDDALTSGVVYSTDLICKLCYCCWWGLQNLSSLGQG 233
              L + +   I  N  T F+FGI  DAL SGVV STD   K  YC WWGLQNLSSLGQ 
Sbjct: 318 NTTLFNASCPVIEPNT-TVFDFGILLDALQSGVVESTDFPQKFFYCFWWGLQNLSSLGQN 377

Query: 234 LKTSQHIWEISF 244
           LKTS ++WEI F
Sbjct: 378 LKTSTYVWEICF 378

[Close]

BLAST of CmaCh16G000640.1 vs. TrEMBL
Match: D7MSU7_ARALL (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_918383 PE=4 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 2.6e-22
Identity = 77/194 (39.69%), Postives = 108/194 (55.67%), Query Frame = 1


Query: 54  VVNLLVIPAATKGSHFSMALRPLQFVLIIQHLPRALRIYKFLKKVRLSSSLFPNSTRGNA 113
           +V L+VIP   +GS        L+F++  Q++PR +RIY   K+V  +S +   +    A
Sbjct: 201 MVILIVIPHM-RGSPSLNTKNMLKFIVFFQYIPRFIRIYPLYKEVTRTSGILTETAWAGA 260

Query: 114 IFNLFLYMLSSHSSELVYSFIAFAFILALTQYVSDPSRPLEPFGTCLLLSVKQISCRK-- 173
            FNLFLYML+SH       F AF ++ ++ +      +  E   +  + S+  + C +  
Sbjct: 261 AFNLFLYMLASH------VFGAFWYLFSIERETVCWKQACEKTNSSCIPSL--LYCDREI 320

Query: 174 --GVALIHIALGYITSNDKTAFNFGIFDDALTSGVVYSTDLICKLCYCCWWGLQNLSSLG 233
             G A ++ +    T N  T F+FGIF DAL SGVV S D   K  YC WWGLQNLSSLG
Sbjct: 321 PGGNAFLNESCPIQTPN-TTLFDFGIFLDALQSGVVESQDFPQKFFYCFWWGLQNLSSLG 380

Query: 234 QGLKTSQHIWEISF 244
           Q LKTS ++WEI F
Sbjct: 381 QNLKTSTYVWEICF 384

[Close]

BLAST of CmaCh16G000640.1 vs. TrEMBL
Match: A0A151TS64_CAJCA (Cyclic nucleotide-gated ion channel 1 OS=Cajanus cajan GN=KK1_009077 PE=4 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 4.5e-22
Identity = 74/194 (38.14%), Postives = 101/194 (52.06%), Query Frame = 1


Query: 55  VNLLVIPAATKGSHFSMALRPLQFVLIIQHLPRALRIYKFLKKVRLSSSLFPNSTRGNAI 114
           V +L+I    +GS        L+F++  Q++PR LRI    K+V  +S +   +    A 
Sbjct: 200 VAILIIIPKLRGSESLNTKTLLKFIVFFQYIPRFLRIIPLYKEVTRTSGILTETAWAGAA 259

Query: 115 FNLFLYMLSSHSSELVYSFIAFAFILALTQYVSDPSRPLEPFGTCLLLSVKQISC--RKG 174
           FNLFLYML+SH         AF ++ ++ +  +          TC   +  ++ C   +G
Sbjct: 260 FNLFLYMLASHVIG------AFWYLFSIERETTCWQHACRRNSTC---NTAEMYCDNHRG 319

Query: 175 VALIHIALGY---ITSNDKTAFNFGIFDDALTSGVVYSTDLICKLCYCCWWGLQNLSSLG 234
           V  I   L     I   + T FNFGIF DAL SGVV S D   K  YC WWGL+NLSSLG
Sbjct: 320 VGTISGFLNASCPIQDQNTTLFNFGIFLDALQSGVVESRDFPQKFFYCFWWGLRNLSSLG 379

Query: 235 QGLKTSQHIWEISF 244
           Q L TS ++WEI F
Sbjct: 380 QNLATSTYVWEICF 384

[Close]

BLAST of CmaCh16G000640.1 vs. TAIR10
Match: AT5G53130.1 (AT5G53130.1 cyclic nucleotide gated channel 1)

HSP 1 Score: 112.1 bits (279), Expect = 5.1e-25
Identity = 78/194 (40.21%), Postives = 107/194 (55.15%), Query Frame = 1


Query: 54  VVNLLVIPAATKGSHFSMALRPLQFVLIIQHLPRALRIYKFLKKVRLSSSLFPNSTRGNA 113
           +V L++IP   +GS        L+F++  Q++PR +RIY   K+V  +S +   +    A
Sbjct: 201 MVILIIIPHM-RGSSSLNTKNMLKFIVFFQYIPRFIRIYPLYKEVTRTSGILTETAWAGA 260

Query: 114 IFNLFLYMLSSHSSELVYSFIAFAFILALTQ----YVSDPSRPLEPFGTCLLLSVKQISC 173
            FNLFLYML+SH       F AF ++ ++ +    +     R   P  + LL    + + 
Sbjct: 261 AFNLFLYMLASH------VFGAFWYLFSIERETVCWKQACERNNPPCISKLLYCDPETA- 320

Query: 174 RKGVALIHIALGYITSNDKTAFNFGIFDDALTSGVVYSTDLICKLCYCCWWGLQNLSSLG 233
             G A ++ +    T N  T F+FGIF DAL SGVV S D   K  YC WWGLQNLSSLG
Sbjct: 321 -GGNAFLNESCPIQTPN-TTLFDFGIFLDALQSGVVESQDFPQKFFYCFWWGLQNLSSLG 380

Query: 234 QGLKTSQHIWEISF 244
           Q LKTS +IWEI F
Sbjct: 381 QNLKTSTYIWEICF 384

[Close]

BLAST of CmaCh16G000640.1 vs. TAIR10
Match: AT5G57940.1 (AT5G57940.1 cyclic nucleotide gated channel 5)

HSP 1 Score: 96.3 bits (238), Expect = 2.9e-20
Identity = 64/193 (33.16%), Postives = 100/193 (51.81%), Query Frame = 1


Query: 63  ATKGSHFSMALRPLQFVLIIQHLPRALRIYKFLKKVRLSSSLFPNSTRGNAIFNLFLYML 122
           ++ GS      + L F++++Q++PR LR+     +++ ++ +F  +    A + L LYML
Sbjct: 213 SSNGSDVLATKQALLFIVLVQYIPRFLRVLPLTSELKRTAGVFAETAWAGAAYYLLLYML 272

Query: 123 SSHSSELVYSFIAFAFILALTQYVSDPSRPLEPFGTCLLLSVKQISCRK----GVALIHI 182
           +SH         AF ++LAL +  +         G C   S   + C      G A+ + 
Sbjct: 273 ASHIVG------AFWYLLALERNDACWQEACIDAGNC---STDFLYCGNQNMDGYAVWNR 332

Query: 183 ALGYITSNDKTA--------FNFGIFDDALTSGVVYSTDLICKLCYCCWWGLQNLSSLGQ 242
           A   +  +   A        F+FGI+  AL+SG+V S + I K CYC WWGLQNLS+LGQ
Sbjct: 333 AKESVLKSKCRADLDDNNPPFDFGIYTQALSSGIVSSQNFIVKYCYCLWWGLQNLSTLGQ 392

Query: 243 GLKTSQHIWEISF 244
           GL+TS +  EI F
Sbjct: 393 GLETSTYPMEIIF 396

[Close]

BLAST of CmaCh16G000640.1 vs. TAIR10
Match: AT2G46430.1 (AT2G46430.1 cyclic nucleotide gated channel 3)

HSP 1 Score: 95.5 bits (236), Expect = 4.9e-20
Identity = 75/206 (36.41%), Postives = 98/206 (47.57%), Query Frame = 1


Query: 54  VVNLLVIPAATKGSHFSMALRPLQFVLIIQHLPRALRIYKFLKKVRLSSSLFPNSTRGNA 113
           VV L ++P   + +   +A   L++V+  Q++PR  RIY   K+V  +S L   +    A
Sbjct: 189 VVVLAIVPRMRRPASL-VAKELLKWVIFCQYVPRIARIYPLFKEVTRTSGLVTETAWAGA 248

Query: 114 IFNLFLYMLSSHSSELVYSFI-----------AFAFILALTQ---YVSDPSRPLEPF--G 173
             NLFLYML+SH     +  I           A A I   T    Y S        F  G
Sbjct: 249 ALNLFLYMLASHVFGSFWYLISIERKDRCWREACAKIQNCTHAYLYCSPTGEDNRLFLNG 308

Query: 174 TCLLLSVKQISCRKGVALIHIALGYITSNDKTAFNFGIFDDALTSGVVYSTDLICKLCYC 233
           +C L+  ++I+                  + T FNFGIF DAL SGVV S D   K  YC
Sbjct: 309 SCPLIDPEEIT------------------NSTVFNFGIFADALQSGVVESRDFPKKFFYC 368

Query: 234 CWWGLQNLSSLGQGLKTSQHIWEISF 244
            WWGL+NLS+LGQ LKTS    EI F
Sbjct: 369 FWWGLRNLSALGQNLKTSAFEGEIIF 375

[Close]

BLAST of CmaCh16G000640.1 vs. TAIR10
Match: AT1G01340.2 (AT1G01340.2 cyclic nucleotide gated channel 10)

HSP 1 Score: 93.2 bits (230), Expect = 2.4e-19
Identity = 67/200 (33.50%), Postives = 104/200 (52.00%), Query Frame = 1


Query: 54  VVNLLVIPAATKGSHFSMALRPLQFVLIIQHLPRALRIYKFLKKVRLSSSLFPNSTRGNA 113
           +V L VIP+  +     +    L+F +I Q++PR LR+Y    +V  +S +   +    A
Sbjct: 185 IVVLAVIPSVNQPVSL-LTKDYLKFSIIAQYVPRILRMYPLYTEVTRTSGIVTETAWAGA 244

Query: 114 IFNLFLYMLSSHSSELVYSFIAFAFILALTQYVSDPSRPLEPFGTCLLLSVKQISCRKGV 173
            +NL LYML+SH       F A  +++++ +         E    C   ++K + C    
Sbjct: 245 AWNLSLYMLASHV------FGALWYLISVEREDRCWQEACEKTKGC---NMKFLYCENDR 304

Query: 174 ALIHIALGYITSN----------DKTAFNFGIFDDALTSGVVYSTDLICKLCYCCWWGLQ 233
              +++  ++T++          + T FNFGIF DAL SGVV S D   K  YC WWGL+
Sbjct: 305 ---NVSNNFLTTSCPFLDPGDITNSTIFNFGIFTDALKSGVVESHDFWKKFFYCFWWGLR 364

Query: 234 NLSSLGQGLKTSQHIWEISF 244
           NLS+LGQ L+TS+ + EI F
Sbjct: 365 NLSALGQNLQTSKFVGEIIF 371

[Close]

BLAST of CmaCh16G000640.1 vs. TAIR10
Match: AT4G30560.1 (AT4G30560.1 cyclic nucleotide gated channel 9)

HSP 1 Score: 90.5 bits (223), Expect = 1.6e-18
Identity = 57/195 (29.23%), Postives = 101/195 (51.79%), Query Frame = 1


Query: 64  TKGSHFSMALRPLQFVLIIQHLPRALRIYKFLKKVRLSSSLFPNSTRGNAIFNLFLYMLS 123
           +KG+      R L+ ++++Q++PR +R+Y    +++ ++ +F  +    A + L LYML+
Sbjct: 229 SKGASVLATKRALRSIILVQYIPRFIRLYPLSSELKRTAGVFAETAWAGAAYYLLLYMLA 288

Query: 124 SHSSELVYSFIAFA-FILALTQYVSDPS------------RPLEPFG--TCLLLSVKQIS 183
           SH    ++  +A   +    T+  S+ S              ++ +   T +  SV Q++
Sbjct: 289 SHIVGAIWYLLALERYNGCWTKVCSNSSLDCHRNFLFCGNEKMDGYAAWTTIKDSVLQLN 348

Query: 184 CRKGVALIHIALGYITSNDKTAFNFGIFDDALTSGVVYSTDLICKLCYCCWWGLQNLSSL 243
           C             + + D   F+FGI+  AL+SG+V S   + K  +C WWGLQNLS+L
Sbjct: 349 CP------------VNTTDNPPFDFGIYLRALSSGIVSSKSFVSKYFFCLWWGLQNLSTL 408

[Close]

BLAST of CmaCh16G000640.1 vs. NCBI nr
Match: gi|449465204|ref|XP_004150318.1| (PREDICTED: cyclic nucleotide-gated ion channel 1-like isoform X1 [Cucumis sativus])

HSP 1 Score: 156.0 bits (393), Expect = 8.7e-35
Identity = 91/189 (48.15%), Postives = 116/189 (61.38%), Query Frame = 1


Query: 55  VNLLVIPAATKGSHFSMALRPLQFVLIIQHLPRALRIYKFLKKVRLSSSLFPNSTRGNAI 114
           V +L++   TK SH + ALR L+F+LI Q+ PR  R+Y FLKKVR SS + P+S    A+
Sbjct: 182 VVILIVTQGTKASHLT-ALRSLKFILIFQYFPRVSRVYLFLKKVRWSSGILPDSAGVKAL 241

Query: 115 FNLFLYMLSSHSSELVYSFIAFAFILALTQYVSDPSRPLEPFGTCLLLSVKQISCRKGVA 174
           FNLFLYML+SH+      F AF ++ ++ +  S           C  ++      R   +
Sbjct: 242 FNLFLYMLASHA------FGAFWYLFSVERKASCVQIRCNSHPYCSRMNNNSSFER---S 301

Query: 175 LIHIALGYITSNDKTAFNFGIFDDALTSGVVYSTDLICKLCYCCWWGLQNLSSLGQGLKT 234
            I+       SN  TA ++GIFDDAL SGVV STD I K  YCCWWGLQNLSSLGQGLKT
Sbjct: 302 CINDVCSGTASNVTTALDYGIFDDALNSGVVSSTDFIWKFSYCCWWGLQNLSSLGQGLKT 360

Query: 235 SQHIWEISF 244
           S+ IWEI F
Sbjct: 362 SKDIWEIYF 360

[Close]

BLAST of CmaCh16G000640.1 vs. NCBI nr
Match: gi|778681901|ref|XP_011651606.1| (PREDICTED: cyclic nucleotide-gated ion channel 1-like isoform X2 [Cucumis sativus])

HSP 1 Score: 156.0 bits (393), Expect = 8.7e-35
Identity = 91/189 (48.15%), Postives = 116/189 (61.38%), Query Frame = 1


Query: 55  VNLLVIPAATKGSHFSMALRPLQFVLIIQHLPRALRIYKFLKKVRLSSSLFPNSTRGNAI 114
           V +L++   TK SH + ALR L+F+LI Q+ PR  R+Y FLKKVR SS + P+S    A+
Sbjct: 160 VVILIVTQGTKASHLT-ALRSLKFILIFQYFPRVSRVYLFLKKVRWSSGILPDSAGVKAL 219

Query: 115 FNLFLYMLSSHSSELVYSFIAFAFILALTQYVSDPSRPLEPFGTCLLLSVKQISCRKGVA 174
           FNLFLYML+SH+      F AF ++ ++ +  S           C  ++      R   +
Sbjct: 220 FNLFLYMLASHA------FGAFWYLFSVERKASCVQIRCNSHPYCSRMNNNSSFER---S 279

Query: 175 LIHIALGYITSNDKTAFNFGIFDDALTSGVVYSTDLICKLCYCCWWGLQNLSSLGQGLKT 234
            I+       SN  TA ++GIFDDAL SGVV STD I K  YCCWWGLQNLSSLGQGLKT
Sbjct: 280 CINDVCSGTASNVTTALDYGIFDDALNSGVVSSTDFIWKFSYCCWWGLQNLSSLGQGLKT 338

Query: 235 SQHIWEISF 244
           S+ IWEI F
Sbjct: 340 SKDIWEIYF 338

[Close]

BLAST of CmaCh16G000640.1 vs. NCBI nr
Match: gi|449465194|ref|XP_004150313.1| (PREDICTED: cyclic nucleotide-gated ion channel 1 isoform X1 [Cucumis sativus])

HSP 1 Score: 132.1 bits (331), Expect = 1.3e-27
Identity = 84/191 (43.98%), Postives = 108/191 (56.54%), Query Frame = 1


Query: 54  VVNLLVIPAATKGSHFSMALRPLQFVLIIQHLPRALRIYKFLKKVRLSSSLFPNSTRGNA 113
           VV L++IP+  +G+ F  A+R L+++LI+Q+LPR  RIY FLKKVR +SS+ P S    A
Sbjct: 186 VVVLILIPSL-RGNGFIYAVRSLKYILIVQYLPRVFRIYSFLKKVRWTSSILPESAGAKA 245

Query: 114 IFNLFLYMLSSH-SSELVYSFIAFAFILALTQYVSDPSRPLEPFGTCLLLSVKQISCRKG 173
           +FNLFLYML+SH      Y F          +  ++ S      G    LSV  I   K 
Sbjct: 246 VFNLFLYMLASHVIGAFWYLFTIERKTTCWEENYTNWSLNCNYVGN---LSVDTICSPK- 305

Query: 174 VALIHIALGYITSNDKTAFNFGIFDDALTSGVVYSTDLICKLCYCCWWGLQNLSSLGQGL 233
                        ND  +FNFGIF DAL   +V S +++ K   C WWGLQ LSSLGQ L
Sbjct: 306 -----------AENDSNSFNFGIFKDALP--IVGSREIVKKFSLCFWWGLQKLSSLGQDL 358

Query: 234 KTSQHIWEISF 244
           KTS H+WEI F
Sbjct: 366 KTSNHLWEIYF 358

[Close]

BLAST of CmaCh16G000640.1 vs. NCBI nr
Match: gi|778681910|ref|XP_011651608.1| (PREDICTED: cyclic nucleotide-gated ion channel 1 isoform X2 [Cucumis sativus])

HSP 1 Score: 132.1 bits (331), Expect = 1.3e-27
Identity = 84/191 (43.98%), Postives = 108/191 (56.54%), Query Frame = 1


Query: 54  VVNLLVIPAATKGSHFSMALRPLQFVLIIQHLPRALRIYKFLKKVRLSSSLFPNSTRGNA 113
           VV L++IP+  +G+ F  A+R L+++LI+Q+LPR  RIY FLKKVR +SS+ P S    A
Sbjct: 46  VVVLILIPSL-RGNGFIYAVRSLKYILIVQYLPRVFRIYSFLKKVRWTSSILPESAGAKA 105

Query: 114 IFNLFLYMLSSH-SSELVYSFIAFAFILALTQYVSDPSRPLEPFGTCLLLSVKQISCRKG 173
           +FNLFLYML+SH      Y F          +  ++ S      G    LSV  I   K 
Sbjct: 106 VFNLFLYMLASHVIGAFWYLFTIERKTTCWEENYTNWSLNCNYVGN---LSVDTICSPK- 165

Query: 174 VALIHIALGYITSNDKTAFNFGIFDDALTSGVVYSTDLICKLCYCCWWGLQNLSSLGQGL 233
                        ND  +FNFGIF DAL   +V S +++ K   C WWGLQ LSSLGQ L
Sbjct: 166 -----------AENDSNSFNFGIFKDALP--IVGSREIVKKFSLCFWWGLQKLSSLGQDL 218

Query: 234 KTSQHIWEISF 244
           KTS H+WEI F
Sbjct: 226 KTSNHLWEIYF 218

[Close]

BLAST of CmaCh16G000640.1 vs. NCBI nr
Match: gi|659077706|ref|XP_008439340.1| (PREDICTED: cyclic nucleotide-gated ion channel 1-like isoform X1 [Cucumis melo])

HSP 1 Score: 124.4 bits (311), Expect = 2.8e-25
Identity = 80/190 (42.11%), Postives = 105/190 (55.26%), Query Frame = 1


Query: 54  VVNLLVIPAATKGSHFSMALRPLQFVLIIQHLPRALRIYKFLKKVRLSSSLFPNSTRGNA 113
           VV L++IP+  +G+ F  A+R L+++LI+Q+LPR  RIY FLKKVR +SS+ P S    A
Sbjct: 252 VVVLILIPSL-RGNGFIYAVRSLKYILIVQYLPRVFRIYSFLKKVRWTSSILPESAGAKA 311

Query: 114 IFNLFLYMLSSHSSELVYSFIAFAFILALTQYVSDPSRPLEPFGTCLLLSVKQISCRKGV 173
            FNLFLYML+SH        +  AF    T  V   +   E   T   L+   +      
Sbjct: 312 AFNLFLYMLASH--------VIGAFWYLFT--VERKTTCWEESYTNWPLNCNYVGNLSAN 371

Query: 174 ALIHIALGYITSNDKTAFNFGIFDDALTSGVVYSTDLICKLCYCCWWGLQNLSSLGQGLK 233
                       N   +F+FGIF DAL   +V S  ++ KL  C WWGLQ LSSLGQ LK
Sbjct: 372 LSADTICSPKAENASNSFDFGIFKDALR--IVGSRKIVKKLSLCFWWGLQKLSSLGQDLK 428

Query: 234 TSQHIWEISF 244
           TS H+WE+ F
Sbjct: 432 TSNHLWEVYF 428

The following BLAST results are available for this feature:

BLAST of CmaCh16G000640.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
CNGC1_ARATH	9.0e-24	40.21	Cyclic nucleotide-gated ion channel 1 OS=Arabidopsis thaliana GN=CNGC1 PE=1 SV=1	[more]
CNGC5_ARATH	5.1e-19	33.16	Probable cyclic nucleotide-gated ion channel 5 OS=Arabidopsis thaliana GN=CNGC5 ...	[more]
CNGC3_ARATH	8.7e-19	36.41	Probable cyclic nucleotide-gated ion channel 3 OS=Arabidopsis thaliana GN=CNGC3 ...	[more]
CNG10_ARATH	4.3e-18	33.50	Probable cyclic nucleotide-gated ion channel 10 OS=Arabidopsis thaliana GN=CNGC1...	[more]
CNGC9_ARATH	2.8e-17	29.23	Putative cyclic nucleotide-gated ion channel 9 OS=Arabidopsis thaliana GN=CNGC9 ...	[more]

BLAST of CmaCh16G000640.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L8K4_CUCSA	6.1e-35	48.15	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G607120 PE=4 SV=1	[more]
A0A0A0LDV9_CUCSA	9.4e-28	43.98	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G607130 PE=4 SV=1	[more]
E0CUJ3_VITVI	2.0e-22	40.10	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_16s0050g02560 PE=4 SV=...	[more]
D7MSU7_ARALL	2.6e-22	39.69	Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRA...	[more]
A0A151TS64_CAJCA	4.5e-22	38.14	Cyclic nucleotide-gated ion channel 1 OS=Cajanus cajan GN=KK1_009077 PE=4 SV=1	[more]

BLAST of CmaCh16G000640.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G53130.1	5.1e-25	40.21	cyclic nucleotide gated channel 1	[more]
AT5G57940.1	2.9e-20	33.16	cyclic nucleotide gated channel 5	[more]
AT2G46430.1	4.9e-20	36.41	cyclic nucleotide gated channel 3	[more]
AT1G01340.2	2.4e-19	33.50	cyclic nucleotide gated channel 10	[more]
AT4G30560.1	1.6e-18	29.23	cyclic nucleotide gated channel 9	[more]

BLAST of CmaCh16G000640.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449465204\|ref\|XP_004150318.1\|	8.7e-35	48.15	PREDICTED: cyclic nucleotide-gated ion channel 1-like isoform X1 [Cucumis sativu...	[more]
gi\|778681901\|ref\|XP_011651606.1\|	8.7e-35	48.15	PREDICTED: cyclic nucleotide-gated ion channel 1-like isoform X2 [Cucumis sativu...	[more]
gi\|449465194\|ref\|XP_004150313.1\|	1.3e-27	43.98	PREDICTED: cyclic nucleotide-gated ion channel 1 isoform X1 [Cucumis sativus]	[more]
gi\|778681910\|ref\|XP_011651608.1\|	1.3e-27	43.98	PREDICTED: cyclic nucleotide-gated ion channel 1 isoform X2 [Cucumis sativus]	[more]
gi\|659077706\|ref\|XP_008439340.1\|	2.8e-25	42.11	PREDICTED: cyclic nucleotide-gated ion channel 1-like isoform X1 [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006811	ion transport
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmaCh16G000640	CmaCh16G000640	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmaCh16G000640.1	CmaCh16G000640.1-protein	polypeptide

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh16G000640.1.three_prime_UTR.1	CmaCh16G000640.1.three_prime_UTR.1	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh16G000640.1.CDS.4	CmaCh16G000640.1.CDS.4	CDS
CmaCh16G000640.1.CDS.3	CmaCh16G000640.1.CDS.3	CDS
CmaCh16G000640.1.CDS.2	CmaCh16G000640.1.CDS.2	CDS
CmaCh16G000640.1.CDS.1	CmaCh16G000640.1.CDS.1	CDS

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh16G000640.1.exon.4	CmaCh16G000640.1.exon.4	exon
CmaCh16G000640.1.exon.3	CmaCh16G000640.1.exon.3	exon
CmaCh16G000640.1.exon.2	CmaCh16G000640.1.exon.2	exon
CmaCh16G000640.1.exon.1	CmaCh16G000640.1.exon.1	exon

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR10217	VOLTAGE AND LIGAND GATED POTASSIUM CHANNEL	coord: 187..243 score: 3.7E-31coord: 54..139 score: 3.7
None	No IPR available	PANTHER	PTHR10217:SF465	CYCLIC NUCLEOTIDE-GATED ION CHANNEL 11-RELATED	coord: 187..243 score: 3.7E-31coord: 54..139 score: 3.7