CmaCh16G000640 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh16G000640
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Cyclic nucleotide-gated ion channel-like protein
Location	Cma_Chr16 : 278135 .. 280291 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGCTGCATTCATGATGTACAACCAACCAAGGGGGATTGCTTTAATGGCGGACGAAGGCATGGCTTGGGTACTGGAGGATGGTGTTATAAGGATATTCATCCTGTTTTCAGCAAGAAAGAGCTCGTATCGCTTGGATGGAGAAAATGGTGCCATACGGTTAGTTCTTTTGTTCTTAATTTGAACTCTTAGCATCGCAACTATGCCTGGAATGTTGTTTGATTACTACATTTGGAGTAGCCTTTGTATCTCATGAATATGTTCGACTTCCTCTCATTCTTTTACTGCCTTTGGAATTTCTGATGTAGCCGTTGGGGTTTATTGGGTGTTGGGACGAGGTTCGCTTGGTTTCTCCTTTAGGAAAAAATACAAAGTTTAGTTTCTTTACCATTTGTGCTTCCCTAAGTGTATTTTTAGTGGGTCACTGCACTTTCAAGCCTCTGATACTAATGTTAGGAACTACGGATATCTATGATATTGTTCACTTTAAGCATAAACTCTCGTAGTTTTACTCCTCGTACCCACAGAGATATATTTCTTATGATCATTCTCTATGTCTCTGATGCTATGCTAGTTTCGTATGCTGATTTAAGATGTGATTTGTTTAGGATTCAGTCTTGCTCTCGCGAACATGTGGCTGAGAGACCTTCTGGAAAGATTCATTGTTTAAAAAAAGAGATGAGTAAAGGGTTGAGGTTTATAAAAAAGTGCATTGGAGAGCTTCATGTGTGGAATGTAGTAGTTGTGATATTGTAGCTGCGATCCAACTGGACCCTTTGTTCTGTTACATCTTAGTAGTTGATGAAAAGAAAAATTGTATTGAGTTTGACCAGAAGTTGCGGATCACGGCTATAGTTTTGCGTTCGCTCATTGATTTTGGCTACATTTTTCTAATAGCCTTTCATTTTCGCATCGGTTATACTGGGCCCTACGATGCAAAAAAGGAAACGCTTTACAAAATAGGCAGCTACTTTACTGTTGACATTCTTGCCGCCTTCCTCTCCCACAGGTTTGGACTATTAATCTCTGCCTAAGTGATGAATTTGGAACATTGATGTTCTATAACATGTGAGGAATCGCTTGTGCAGGTGGTGAATCTATTAGTCATTCCAGCAGCAACAAAAGGCTCTCATTTTAGCATGGCTCTGAGGCCATTGCAGTTTGTTCTTATAATTCAACATTTGCCAAGGGCGTTACGGATATACAAATTCTTAAAGAAAGTTAGATTGAGTTCTAGCCTTTTTCCCAATTCTACTCGGGGCAATGCTATATTCAATCTCTTCCTGTATATGCTTTCAAGTCATGTAAGTTCATCAAGTCGTTAAGGATTCATCTCATCATCTGTTGTATTCAGTTCAAAATGAGAGGGTTATTGACATTATACAAAATATGCTCTCAGTCTTCAGAACTTGTGTACTCTTTCATTGCCTTTGCCTTTATCTTAGCATTAACTCAGTATGTATCTGATCCTTCCAGGCCTTTGGAGCCTTTTGGTACCTGTTTGCTATTGAGCGTAAAGCAAATTTCCTGCAGAAAAGGTGTGGCACTGATCCATATTGCCCTCGGATACATAACCTCAAATGACAAAACAGCTTTCAATTTTGGAATATTTGATGATGCCTTAACTTCTGGCGTTGTCTATTCAACTGATTTGATATGTAAGCTCTGTTATTGTTGCTGGTGGGGTCTGCAGAATCTAAGGTCTGTATTCCAAAAACCCCACGTATTCTGCATTACTGTGTTACGTCTCTACCCATAATCTACGTTTACATCTAACTTTTTTCAGTTCTTTGGGACAAGGCCTCAAAACTAGTCAGCATATATGGGAAATTTCCTTTGGGAGCAATGATAGGCCTGGACAATGATAGGCAATGATAGGCCTGGACAATAATAAGTGGGAGCAATGATAGGCCTGGACATAGCATCAACACCAATGGGTTGCCATAAGGTACCAACTCCTAATGGAAACTCTTTCTATTGAGTCCTGCCATCTCTTTCTATTTAGTATATCAGCACATTCGAAACATGGACTAATTTTGTCGTGTGTTAGTAGTACTATTTAAACACTTTTAAAATCATTGCATCAGTGTATCAATAGTTTATCATAATTTAGTATATATAAGCACTTTTTAAGTATTCTTAATAACCTTTCCTCTG

mRNA sequence

ATGGGCTGCATTCATGATGTACAACCAACCAAGGGGGATTGCTTTAATGGCGGACGAAGGCATGGCTTGGGTACTGGAGGATGGTGTTATAAGGATATTCATCCTGTTTTCAGCAAGAAAGAGCTCGTATCGCTTGGATGGAGAAAATGGTGCCATACGGTGGTGAATCTATTAGTCATTCCAGCAGCAACAAAAGGCTCTCATTTTAGCATGGCTCTGAGGCCATTGCAGTTTGTTCTTATAATTCAACATTTGCCAAGGGCGTTACGGATATACAAATTCTTAAAGAAAGTTAGATTGAGTTCTAGCCTTTTTCCCAATTCTACTCGGGGCAATGCTATATTCAATCTCTTCCTGTATATGCTTTCAAGTCATTCTTCAGAACTTGTGTACTCTTTCATTGCCTTTGCCTTTATCTTAGCATTAACTCAGTATGTATCTGATCCTTCCAGGCCTTTGGAGCCTTTTGGTACCTGTTTGCTATTGAGCGTAAAGCAAATTTCCTGCAGAAAAGGTGTGGCACTGATCCATATTGCCCTCGGATACATAACCTCAAATGACAAAACAGCTTTCAATTTTGGAATATTTGATGATGCCTTAACTTCTGGCGTTGTCTATTCAACTGATTTGATATGTAAGCTCTGTTATTGTTGCTGGTGGGGTCTGCAGAATCTAAGTTCTTTGGGACAAGGCCTCAAAACTAGTCAGCATATATGGGAAATTTCCTTTGGGAGCAATGATAGGCCTGGACAATGATAGGCAATGATAGGCCTGGACAATAATAAGTGGGAGCAATGATAGGCCTGGACATAGCATCAACACCAATGGGTTGCCATAAGGTACCAACTCCTAATGGAAACTCTTTCTATTGAGTCCTGCCATCTCTTTCTATTTAGTATATCAGCACATTCGAAACATGGACTAATTTTGTCGTGTGTTAGTAGTACTATTTAAACACTTTTAAAATCATTGCATCAGTGTATCAATAGTTTATCATAATTTAGTATATATAAGCACTTTTTAAGTATTCTTAATAACCTTTCCTCTG

Coding sequence (CDS)

ATGGGCTGCATTCATGATGTACAACCAACCAAGGGGGATTGCTTTAATGGCGGACGAAGGCATGGCTTGGGTACTGGAGGATGGTGTTATAAGGATATTCATCCTGTTTTCAGCAAGAAAGAGCTCGTATCGCTTGGATGGAGAAAATGGTGCCATACGGTGGTGAATCTATTAGTCATTCCAGCAGCAACAAAAGGCTCTCATTTTAGCATGGCTCTGAGGCCATTGCAGTTTGTTCTTATAATTCAACATTTGCCAAGGGCGTTACGGATATACAAATTCTTAAAGAAAGTTAGATTGAGTTCTAGCCTTTTTCCCAATTCTACTCGGGGCAATGCTATATTCAATCTCTTCCTGTATATGCTTTCAAGTCATTCTTCAGAACTTGTGTACTCTTTCATTGCCTTTGCCTTTATCTTAGCATTAACTCAGTATGTATCTGATCCTTCCAGGCCTTTGGAGCCTTTTGGTACCTGTTTGCTATTGAGCGTAAAGCAAATTTCCTGCAGAAAAGGTGTGGCACTGATCCATATTGCCCTCGGATACATAACCTCAAATGACAAAACAGCTTTCAATTTTGGAATATTTGATGATGCCTTAACTTCTGGCGTTGTCTATTCAACTGATTTGATATGTAAGCTCTGTTATTGTTGCTGGTGGGGTCTGCAGAATCTAAGTTCTTTGGGACAAGGCCTCAAAACTAGTCAGCATATATGGGAAATTTCCTTTGGGAGCAATGATAGGCCTGGACAATGA

Protein sequence

MGCIHDVQPTKGDCFNGGRRHGLGTGGWCYKDIHPVFSKKELVSLGWRKWCHTVVNLLVIPAATKGSHFSMALRPLQFVLIIQHLPRALRIYKFLKKVRLSSSLFPNSTRGNAIFNLFLYMLSSHSSELVYSFIAFAFILALTQYVSDPSRPLEPFGTCLLLSVKQISCRKGVALIHIALGYITSNDKTAFNFGIFDDALTSGVVYSTDLICKLCYCCWWGLQNLSSLGQGLKTSQHIWEISFGSNDRPGQ

Homology

[Close]

BLAST of CmaCh16G000640 vs. Swiss-Prot
Match: CNGC1_ARATH (Cyclic nucleotide-gated ion channel 1 OS=Arabidopsis thaliana GN=CNGC1 PE=1 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 9.0e-24
Identity = 78/194 (40.21%), Postives = 107/194 (55.15%), Query Frame = 1


Query: 54  VVNLLVIPAATKGSHFSMALRPLQFVLIIQHLPRALRIYKFLKKVRLSSSLFPNSTRGNA 113
           +V L++IP   +GS        L+F++  Q++PR +RIY   K+V  +S +   +    A
Sbjct: 201 MVILIIIPHM-RGSSSLNTKNMLKFIVFFQYIPRFIRIYPLYKEVTRTSGILTETAWAGA 260

Query: 114 IFNLFLYMLSSHSSELVYSFIAFAFILALTQ----YVSDPSRPLEPFGTCLLLSVKQISC 173
            FNLFLYML+SH       F AF ++ ++ +    +     R   P  + LL    + + 
Sbjct: 261 AFNLFLYMLASH------VFGAFWYLFSIERETVCWKQACERNNPPCISKLLYCDPETA- 320

Query: 174 RKGVALIHIALGYITSNDKTAFNFGIFDDALTSGVVYSTDLICKLCYCCWWGLQNLSSLG 233
             G A ++ +    T N  T F+FGIF DAL SGVV S D   K  YC WWGLQNLSSLG
Sbjct: 321 -GGNAFLNESCPIQTPN-TTLFDFGIFLDALQSGVVESQDFPQKFFYCFWWGLQNLSSLG 380

Query: 234 QGLKTSQHIWEISF 244
           Q LKTS +IWEI F
Sbjct: 381 QNLKTSTYIWEICF 384

[Close]

BLAST of CmaCh16G000640 vs. Swiss-Prot
Match: CNGC5_ARATH (Probable cyclic nucleotide-gated ion channel 5 OS=Arabidopsis thaliana GN=CNGC5 PE=2 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 5.1e-19
Identity = 64/193 (33.16%), Postives = 100/193 (51.81%), Query Frame = 1


Query: 63  ATKGSHFSMALRPLQFVLIIQHLPRALRIYKFLKKVRLSSSLFPNSTRGNAIFNLFLYML 122
           ++ GS      + L F++++Q++PR LR+     +++ ++ +F  +    A + L LYML
Sbjct: 213 SSNGSDVLATKQALLFIVLVQYIPRFLRVLPLTSELKRTAGVFAETAWAGAAYYLLLYML 272

Query: 123 SSHSSELVYSFIAFAFILALTQYVSDPSRPLEPFGTCLLLSVKQISCRK----GVALIHI 182
           +SH         AF ++LAL +  +         G C   S   + C      G A+ + 
Sbjct: 273 ASHIVG------AFWYLLALERNDACWQEACIDAGNC---STDFLYCGNQNMDGYAVWNR 332

Query: 183 ALGYITSNDKTA--------FNFGIFDDALTSGVVYSTDLICKLCYCCWWGLQNLSSLGQ 242
           A   +  +   A        F+FGI+  AL+SG+V S + I K CYC WWGLQNLS+LGQ
Sbjct: 333 AKESVLKSKCRADLDDNNPPFDFGIYTQALSSGIVSSQNFIVKYCYCLWWGLQNLSTLGQ 392

Query: 243 GLKTSQHIWEISF 244
           GL+TS +  EI F
Sbjct: 393 GLETSTYPMEIIF 396

[Close]

BLAST of CmaCh16G000640 vs. Swiss-Prot
Match: CNGC3_ARATH (Probable cyclic nucleotide-gated ion channel 3 OS=Arabidopsis thaliana GN=CNGC3 PE=2 SV=2)

HSP 1 Score: 95.5 bits (236), Expect = 8.7e-19
Identity = 75/206 (36.41%), Postives = 98/206 (47.57%), Query Frame = 1


Query: 54  VVNLLVIPAATKGSHFSMALRPLQFVLIIQHLPRALRIYKFLKKVRLSSSLFPNSTRGNA 113
           VV L ++P   + +   +A   L++V+  Q++PR  RIY   K+V  +S L   +    A
Sbjct: 189 VVVLAIVPRMRRPASL-VAKELLKWVIFCQYVPRIARIYPLFKEVTRTSGLVTETAWAGA 248

Query: 114 IFNLFLYMLSSHSSELVYSFI-----------AFAFILALTQ---YVSDPSRPLEPF--G 173
             NLFLYML+SH     +  I           A A I   T    Y S        F  G
Sbjct: 249 ALNLFLYMLASHVFGSFWYLISIERKDRCWREACAKIQNCTHAYLYCSPTGEDNRLFLNG 308

Query: 174 TCLLLSVKQISCRKGVALIHIALGYITSNDKTAFNFGIFDDALTSGVVYSTDLICKLCYC 233
           +C L+  ++I+                  + T FNFGIF DAL SGVV S D   K  YC
Sbjct: 309 SCPLIDPEEIT------------------NSTVFNFGIFADALQSGVVESRDFPKKFFYC 368

Query: 234 CWWGLQNLSSLGQGLKTSQHIWEISF 244
            WWGL+NLS+LGQ LKTS    EI F
Sbjct: 369 FWWGLRNLSALGQNLKTSAFEGEIIF 375

[Close]

BLAST of CmaCh16G000640 vs. Swiss-Prot
Match: CNG10_ARATH (Probable cyclic nucleotide-gated ion channel 10 OS=Arabidopsis thaliana GN=CNGC10 PE=2 SV=2)

HSP 1 Score: 93.2 bits (230), Expect = 4.3e-18
Identity = 67/200 (33.50%), Postives = 104/200 (52.00%), Query Frame = 1


Query: 54  VVNLLVIPAATKGSHFSMALRPLQFVLIIQHLPRALRIYKFLKKVRLSSSLFPNSTRGNA 113
           +V L VIP+  +     +    L+F +I Q++PR LR+Y    +V  +S +   +    A
Sbjct: 185 IVVLAVIPSVNQPVSL-LTKDYLKFSIIAQYVPRILRMYPLYTEVTRTSGIVTETAWAGA 244

Query: 114 IFNLFLYMLSSHSSELVYSFIAFAFILALTQYVSDPSRPLEPFGTCLLLSVKQISCRKGV 173
            +NL LYML+SH       F A  +++++ +         E    C   ++K + C    
Sbjct: 245 AWNLSLYMLASHV------FGALWYLISVEREDRCWQEACEKTKGC---NMKFLYCENDR 304

Query: 174 ALIHIALGYITSN----------DKTAFNFGIFDDALTSGVVYSTDLICKLCYCCWWGLQ 233
              +++  ++T++          + T FNFGIF DAL SGVV S D   K  YC WWGL+
Sbjct: 305 ---NVSNNFLTTSCPFLDPGDITNSTIFNFGIFTDALKSGVVESHDFWKKFFYCFWWGLR 364

Query: 234 NLSSLGQGLKTSQHIWEISF 244
           NLS+LGQ L+TS+ + EI F
Sbjct: 365 NLSALGQNLQTSKFVGEIIF 371

[Close]

BLAST of CmaCh16G000640 vs. Swiss-Prot
Match: CNGC9_ARATH (Putative cyclic nucleotide-gated ion channel 9 OS=Arabidopsis thaliana GN=CNGC9 PE=2 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 2.8e-17
Identity = 57/195 (29.23%), Postives = 101/195 (51.79%), Query Frame = 1


Query: 64  TKGSHFSMALRPLQFVLIIQHLPRALRIYKFLKKVRLSSSLFPNSTRGNAIFNLFLYMLS 123
           +KG+      R L+ ++++Q++PR +R+Y    +++ ++ +F  +    A + L LYML+
Sbjct: 229 SKGASVLATKRALRSIILVQYIPRFIRLYPLSSELKRTAGVFAETAWAGAAYYLLLYMLA 288

Query: 124 SHSSELVYSFIAFA-FILALTQYVSDPS------------RPLEPFG--TCLLLSVKQIS 183
           SH    ++  +A   +    T+  S+ S              ++ +   T +  SV Q++
Sbjct: 289 SHIVGAIWYLLALERYNGCWTKVCSNSSLDCHRNFLFCGNEKMDGYAAWTTIKDSVLQLN 348

Query: 184 CRKGVALIHIALGYITSNDKTAFNFGIFDDALTSGVVYSTDLICKLCYCCWWGLQNLSSL 243
           C             + + D   F+FGI+  AL+SG+V S   + K  +C WWGLQNLS+L
Sbjct: 349 CP------------VNTTDNPPFDFGIYLRALSSGIVSSKSFVSKYFFCLWWGLQNLSTL 408

[Close]

BLAST of CmaCh16G000640 vs. TrEMBL
Match: A0A0A0L8K4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G607120 PE=4 SV=1)

HSP 1 Score: 156.0 bits (393), Expect = 6.1e-35
Identity = 91/189 (48.15%), Postives = 116/189 (61.38%), Query Frame = 1


Query: 55  VNLLVIPAATKGSHFSMALRPLQFVLIIQHLPRALRIYKFLKKVRLSSSLFPNSTRGNAI 114
           V +L++   TK SH + ALR L+F+LI Q+ PR  R+Y FLKKVR SS + P+S    A+
Sbjct: 182 VVILIVTQGTKASHLT-ALRSLKFILIFQYFPRVSRVYLFLKKVRWSSGILPDSAGVKAL 241

Query: 115 FNLFLYMLSSHSSELVYSFIAFAFILALTQYVSDPSRPLEPFGTCLLLSVKQISCRKGVA 174
           FNLFLYML+SH+      F AF ++ ++ +  S           C  ++      R   +
Sbjct: 242 FNLFLYMLASHA------FGAFWYLFSVERKASCVQIRCNSHPYCSRMNNNSSFER---S 301

Query: 175 LIHIALGYITSNDKTAFNFGIFDDALTSGVVYSTDLICKLCYCCWWGLQNLSSLGQGLKT 234
            I+       SN  TA ++GIFDDAL SGVV STD I K  YCCWWGLQNLSSLGQGLKT
Sbjct: 302 CINDVCSGTASNVTTALDYGIFDDALNSGVVSSTDFIWKFSYCCWWGLQNLSSLGQGLKT 360

Query: 235 SQHIWEISF 244
           S+ IWEI F
Sbjct: 362 SKDIWEIYF 360

[Close]

BLAST of CmaCh16G000640 vs. TrEMBL
Match: A0A0A0LDV9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G607130 PE=4 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 9.4e-28
Identity = 84/191 (43.98%), Postives = 108/191 (56.54%), Query Frame = 1


Query: 54  VVNLLVIPAATKGSHFSMALRPLQFVLIIQHLPRALRIYKFLKKVRLSSSLFPNSTRGNA 113
           VV L++IP+  +G+ F  A+R L+++LI+Q+LPR  RIY FLKKVR +SS+ P S    A
Sbjct: 186 VVVLILIPSL-RGNGFIYAVRSLKYILIVQYLPRVFRIYSFLKKVRWTSSILPESAGAKA 245

Query: 114 IFNLFLYMLSSH-SSELVYSFIAFAFILALTQYVSDPSRPLEPFGTCLLLSVKQISCRKG 173
           +FNLFLYML+SH      Y F          +  ++ S      G    LSV  I   K 
Sbjct: 246 VFNLFLYMLASHVIGAFWYLFTIERKTTCWEENYTNWSLNCNYVGN---LSVDTICSPK- 305

Query: 174 VALIHIALGYITSNDKTAFNFGIFDDALTSGVVYSTDLICKLCYCCWWGLQNLSSLGQGL 233
                        ND  +FNFGIF DAL   +V S +++ K   C WWGLQ LSSLGQ L
Sbjct: 306 -----------AENDSNSFNFGIFKDALP--IVGSREIVKKFSLCFWWGLQKLSSLGQDL 358

Query: 234 KTSQHIWEISF 244
           KTS H+WEI F
Sbjct: 366 KTSNHLWEIYF 358

[Close]

BLAST of CmaCh16G000640 vs. TrEMBL
Match: E0CUJ3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_16s0050g02560 PE=4 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 2.0e-22
Identity = 77/192 (40.10%), Postives = 106/192 (55.21%), Query Frame = 1


Query: 54  VVNLLVIPAATKGSHFSMALRPLQFVLIIQHLPRALRIYKFLKKVRLSSSLFPNSTRGNA 113
           VV  ++IP    GS +    R L+FV+  Q++PR LR+    K+V  +S +   +    A
Sbjct: 198 VVIWIIIPKLG-GSKYMNTKRLLKFVVFFQYIPRVLRVRPLYKEVTRTSGILTETAWAGA 257

Query: 114 IFNLFLYMLSSHSSELVYSFIAFAFILALTQYVSDPSRPLEPFGTCLLLSVKQISCRKGV 173
            FNLFLYML+SH         AF ++ A+ +  +  ++      +C+  S   + C+  V
Sbjct: 258 AFNLFLYMLASHVLG------AFWYLFAIDRETTCWTKACGNDTSCIDSS---LYCKGTV 317

Query: 174 --ALIHIALGYITSNDKTAFNFGIFDDALTSGVVYSTDLICKLCYCCWWGLQNLSSLGQG 233
              L + +   I  N  T F+FGI  DAL SGVV STD   K  YC WWGLQNLSSLGQ 
Sbjct: 318 NTTLFNASCPVIEPNT-TVFDFGILLDALQSGVVESTDFPQKFFYCFWWGLQNLSSLGQN 377

Query: 234 LKTSQHIWEISF 244
           LKTS ++WEI F
Sbjct: 378 LKTSTYVWEICF 378

[Close]

BLAST of CmaCh16G000640 vs. TrEMBL
Match: D7MSU7_ARALL (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_918383 PE=4 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 2.6e-22
Identity = 77/194 (39.69%), Postives = 108/194 (55.67%), Query Frame = 1


Query: 54  VVNLLVIPAATKGSHFSMALRPLQFVLIIQHLPRALRIYKFLKKVRLSSSLFPNSTRGNA 113
           +V L+VIP   +GS        L+F++  Q++PR +RIY   K+V  +S +   +    A
Sbjct: 201 MVILIVIPHM-RGSPSLNTKNMLKFIVFFQYIPRFIRIYPLYKEVTRTSGILTETAWAGA 260

Query: 114 IFNLFLYMLSSHSSELVYSFIAFAFILALTQYVSDPSRPLEPFGTCLLLSVKQISCRK-- 173
            FNLFLYML+SH       F AF ++ ++ +      +  E   +  + S+  + C +  
Sbjct: 261 AFNLFLYMLASH------VFGAFWYLFSIERETVCWKQACEKTNSSCIPSL--LYCDREI 320

Query: 174 --GVALIHIALGYITSNDKTAFNFGIFDDALTSGVVYSTDLICKLCYCCWWGLQNLSSLG 233
             G A ++ +    T N  T F+FGIF DAL SGVV S D   K  YC WWGLQNLSSLG
Sbjct: 321 PGGNAFLNESCPIQTPN-TTLFDFGIFLDALQSGVVESQDFPQKFFYCFWWGLQNLSSLG 380

Query: 234 QGLKTSQHIWEISF 244
           Q LKTS ++WEI F
Sbjct: 381 QNLKTSTYVWEICF 384

[Close]

BLAST of CmaCh16G000640 vs. TrEMBL
Match: A0A151TS64_CAJCA (Cyclic nucleotide-gated ion channel 1 OS=Cajanus cajan GN=KK1_009077 PE=4 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 4.5e-22
Identity = 74/194 (38.14%), Postives = 101/194 (52.06%), Query Frame = 1


Query: 55  VNLLVIPAATKGSHFSMALRPLQFVLIIQHLPRALRIYKFLKKVRLSSSLFPNSTRGNAI 114
           V +L+I    +GS        L+F++  Q++PR LRI    K+V  +S +   +    A 
Sbjct: 200 VAILIIIPKLRGSESLNTKTLLKFIVFFQYIPRFLRIIPLYKEVTRTSGILTETAWAGAA 259

Query: 115 FNLFLYMLSSHSSELVYSFIAFAFILALTQYVSDPSRPLEPFGTCLLLSVKQISC--RKG 174
           FNLFLYML+SH         AF ++ ++ +  +          TC   +  ++ C   +G
Sbjct: 260 FNLFLYMLASHVIG------AFWYLFSIERETTCWQHACRRNSTC---NTAEMYCDNHRG 319

Query: 175 VALIHIALGY---ITSNDKTAFNFGIFDDALTSGVVYSTDLICKLCYCCWWGLQNLSSLG 234
           V  I   L     I   + T FNFGIF DAL SGVV S D   K  YC WWGL+NLSSLG
Sbjct: 320 VGTISGFLNASCPIQDQNTTLFNFGIFLDALQSGVVESRDFPQKFFYCFWWGLRNLSSLG 379

Query: 235 QGLKTSQHIWEISF 244
           Q L TS ++WEI F
Sbjct: 380 QNLATSTYVWEICF 384

[Close]

BLAST of CmaCh16G000640 vs. TAIR10
Match: AT5G53130.1 (AT5G53130.1 cyclic nucleotide gated channel 1)

HSP 1 Score: 112.1 bits (279), Expect = 5.1e-25
Identity = 78/194 (40.21%), Postives = 107/194 (55.15%), Query Frame = 1


Query: 54  VVNLLVIPAATKGSHFSMALRPLQFVLIIQHLPRALRIYKFLKKVRLSSSLFPNSTRGNA 113
           +V L++IP   +GS        L+F++  Q++PR +RIY   K+V  +S +   +    A
Sbjct: 201 MVILIIIPHM-RGSSSLNTKNMLKFIVFFQYIPRFIRIYPLYKEVTRTSGILTETAWAGA 260

Query: 114 IFNLFLYMLSSHSSELVYSFIAFAFILALTQ----YVSDPSRPLEPFGTCLLLSVKQISC 173
            FNLFLYML+SH       F AF ++ ++ +    +     R   P  + LL    + + 
Sbjct: 261 AFNLFLYMLASH------VFGAFWYLFSIERETVCWKQACERNNPPCISKLLYCDPETA- 320

Query: 174 RKGVALIHIALGYITSNDKTAFNFGIFDDALTSGVVYSTDLICKLCYCCWWGLQNLSSLG 233
             G A ++ +    T N  T F+FGIF DAL SGVV S D   K  YC WWGLQNLSSLG
Sbjct: 321 -GGNAFLNESCPIQTPN-TTLFDFGIFLDALQSGVVESQDFPQKFFYCFWWGLQNLSSLG 380

Query: 234 QGLKTSQHIWEISF 244
           Q LKTS +IWEI F
Sbjct: 381 QNLKTSTYIWEICF 384

[Close]

BLAST of CmaCh16G000640 vs. TAIR10
Match: AT5G57940.1 (AT5G57940.1 cyclic nucleotide gated channel 5)

HSP 1 Score: 96.3 bits (238), Expect = 2.9e-20
Identity = 64/193 (33.16%), Postives = 100/193 (51.81%), Query Frame = 1


Query: 63  ATKGSHFSMALRPLQFVLIIQHLPRALRIYKFLKKVRLSSSLFPNSTRGNAIFNLFLYML 122
           ++ GS      + L F++++Q++PR LR+     +++ ++ +F  +    A + L LYML
Sbjct: 213 SSNGSDVLATKQALLFIVLVQYIPRFLRVLPLTSELKRTAGVFAETAWAGAAYYLLLYML 272

Query: 123 SSHSSELVYSFIAFAFILALTQYVSDPSRPLEPFGTCLLLSVKQISCRK----GVALIHI 182
           +SH         AF ++LAL +  +         G C   S   + C      G A+ + 
Sbjct: 273 ASHIVG------AFWYLLALERNDACWQEACIDAGNC---STDFLYCGNQNMDGYAVWNR 332

Query: 183 ALGYITSNDKTA--------FNFGIFDDALTSGVVYSTDLICKLCYCCWWGLQNLSSLGQ 242
           A   +  +   A        F+FGI+  AL+SG+V S + I K CYC WWGLQNLS+LGQ
Sbjct: 333 AKESVLKSKCRADLDDNNPPFDFGIYTQALSSGIVSSQNFIVKYCYCLWWGLQNLSTLGQ 392

Query: 243 GLKTSQHIWEISF 244
           GL+TS +  EI F
Sbjct: 393 GLETSTYPMEIIF 396

[Close]

BLAST of CmaCh16G000640 vs. TAIR10
Match: AT2G46430.1 (AT2G46430.1 cyclic nucleotide gated channel 3)

HSP 1 Score: 95.5 bits (236), Expect = 4.9e-20
Identity = 75/206 (36.41%), Postives = 98/206 (47.57%), Query Frame = 1


Query: 54  VVNLLVIPAATKGSHFSMALRPLQFVLIIQHLPRALRIYKFLKKVRLSSSLFPNSTRGNA 113
           VV L ++P   + +   +A   L++V+  Q++PR  RIY   K+V  +S L   +    A
Sbjct: 189 VVVLAIVPRMRRPASL-VAKELLKWVIFCQYVPRIARIYPLFKEVTRTSGLVTETAWAGA 248

Query: 114 IFNLFLYMLSSHSSELVYSFI-----------AFAFILALTQ---YVSDPSRPLEPF--G 173
             NLFLYML+SH     +  I           A A I   T    Y S        F  G
Sbjct: 249 ALNLFLYMLASHVFGSFWYLISIERKDRCWREACAKIQNCTHAYLYCSPTGEDNRLFLNG 308

Query: 174 TCLLLSVKQISCRKGVALIHIALGYITSNDKTAFNFGIFDDALTSGVVYSTDLICKLCYC 233
           +C L+  ++I+                  + T FNFGIF DAL SGVV S D   K  YC
Sbjct: 309 SCPLIDPEEIT------------------NSTVFNFGIFADALQSGVVESRDFPKKFFYC 368

Query: 234 CWWGLQNLSSLGQGLKTSQHIWEISF 244
            WWGL+NLS+LGQ LKTS    EI F
Sbjct: 369 FWWGLRNLSALGQNLKTSAFEGEIIF 375

[Close]

BLAST of CmaCh16G000640 vs. TAIR10
Match: AT1G01340.2 (AT1G01340.2 cyclic nucleotide gated channel 10)

HSP 1 Score: 93.2 bits (230), Expect = 2.4e-19
Identity = 67/200 (33.50%), Postives = 104/200 (52.00%), Query Frame = 1


Query: 54  VVNLLVIPAATKGSHFSMALRPLQFVLIIQHLPRALRIYKFLKKVRLSSSLFPNSTRGNA 113
           +V L VIP+  +     +    L+F +I Q++PR LR+Y    +V  +S +   +    A
Sbjct: 185 IVVLAVIPSVNQPVSL-LTKDYLKFSIIAQYVPRILRMYPLYTEVTRTSGIVTETAWAGA 244

Query: 114 IFNLFLYMLSSHSSELVYSFIAFAFILALTQYVSDPSRPLEPFGTCLLLSVKQISCRKGV 173
            +NL LYML+SH       F A  +++++ +         E    C   ++K + C    
Sbjct: 245 AWNLSLYMLASHV------FGALWYLISVEREDRCWQEACEKTKGC---NMKFLYCENDR 304

Query: 174 ALIHIALGYITSN----------DKTAFNFGIFDDALTSGVVYSTDLICKLCYCCWWGLQ 233
              +++  ++T++          + T FNFGIF DAL SGVV S D   K  YC WWGL+
Sbjct: 305 ---NVSNNFLTTSCPFLDPGDITNSTIFNFGIFTDALKSGVVESHDFWKKFFYCFWWGLR 364

Query: 234 NLSSLGQGLKTSQHIWEISF 244
           NLS+LGQ L+TS+ + EI F
Sbjct: 365 NLSALGQNLQTSKFVGEIIF 371

[Close]

BLAST of CmaCh16G000640 vs. TAIR10
Match: AT4G30560.1 (AT4G30560.1 cyclic nucleotide gated channel 9)

HSP 1 Score: 90.5 bits (223), Expect = 1.6e-18
Identity = 57/195 (29.23%), Postives = 101/195 (51.79%), Query Frame = 1


Query: 64  TKGSHFSMALRPLQFVLIIQHLPRALRIYKFLKKVRLSSSLFPNSTRGNAIFNLFLYMLS 123
           +KG+      R L+ ++++Q++PR +R+Y    +++ ++ +F  +    A + L LYML+
Sbjct: 229 SKGASVLATKRALRSIILVQYIPRFIRLYPLSSELKRTAGVFAETAWAGAAYYLLLYMLA 288

Query: 124 SHSSELVYSFIAFA-FILALTQYVSDPS------------RPLEPFG--TCLLLSVKQIS 183
           SH    ++  +A   +    T+  S+ S              ++ +   T +  SV Q++
Sbjct: 289 SHIVGAIWYLLALERYNGCWTKVCSNSSLDCHRNFLFCGNEKMDGYAAWTTIKDSVLQLN 348

Query: 184 CRKGVALIHIALGYITSNDKTAFNFGIFDDALTSGVVYSTDLICKLCYCCWWGLQNLSSL 243
           C             + + D   F+FGI+  AL+SG+V S   + K  +C WWGLQNLS+L
Sbjct: 349 CP------------VNTTDNPPFDFGIYLRALSSGIVSSKSFVSKYFFCLWWGLQNLSTL 408

[Close]

BLAST of CmaCh16G000640 vs. NCBI nr
Match: gi|449465204|ref|XP_004150318.1| (PREDICTED: cyclic nucleotide-gated ion channel 1-like isoform X1 [Cucumis sativus])

HSP 1 Score: 156.0 bits (393), Expect = 8.7e-35
Identity = 91/189 (48.15%), Postives = 116/189 (61.38%), Query Frame = 1


Query: 55  VNLLVIPAATKGSHFSMALRPLQFVLIIQHLPRALRIYKFLKKVRLSSSLFPNSTRGNAI 114
           V +L++   TK SH + ALR L+F+LI Q+ PR  R+Y FLKKVR SS + P+S    A+
Sbjct: 182 VVILIVTQGTKASHLT-ALRSLKFILIFQYFPRVSRVYLFLKKVRWSSGILPDSAGVKAL 241

Query: 115 FNLFLYMLSSHSSELVYSFIAFAFILALTQYVSDPSRPLEPFGTCLLLSVKQISCRKGVA 174
           FNLFLYML+SH+      F AF ++ ++ +  S           C  ++      R   +
Sbjct: 242 FNLFLYMLASHA------FGAFWYLFSVERKASCVQIRCNSHPYCSRMNNNSSFER---S 301

Query: 175 LIHIALGYITSNDKTAFNFGIFDDALTSGVVYSTDLICKLCYCCWWGLQNLSSLGQGLKT 234
            I+       SN  TA ++GIFDDAL SGVV STD I K  YCCWWGLQNLSSLGQGLKT
Sbjct: 302 CINDVCSGTASNVTTALDYGIFDDALNSGVVSSTDFIWKFSYCCWWGLQNLSSLGQGLKT 360

Query: 235 SQHIWEISF 244
           S+ IWEI F
Sbjct: 362 SKDIWEIYF 360

[Close]

BLAST of CmaCh16G000640 vs. NCBI nr
Match: gi|778681901|ref|XP_011651606.1| (PREDICTED: cyclic nucleotide-gated ion channel 1-like isoform X2 [Cucumis sativus])

HSP 1 Score: 156.0 bits (393), Expect = 8.7e-35
Identity = 91/189 (48.15%), Postives = 116/189 (61.38%), Query Frame = 1


Query: 55  VNLLVIPAATKGSHFSMALRPLQFVLIIQHLPRALRIYKFLKKVRLSSSLFPNSTRGNAI 114
           V +L++   TK SH + ALR L+F+LI Q+ PR  R+Y FLKKVR SS + P+S    A+
Sbjct: 160 VVILIVTQGTKASHLT-ALRSLKFILIFQYFPRVSRVYLFLKKVRWSSGILPDSAGVKAL 219

Query: 115 FNLFLYMLSSHSSELVYSFIAFAFILALTQYVSDPSRPLEPFGTCLLLSVKQISCRKGVA 174
           FNLFLYML+SH+      F AF ++ ++ +  S           C  ++      R   +
Sbjct: 220 FNLFLYMLASHA------FGAFWYLFSVERKASCVQIRCNSHPYCSRMNNNSSFER---S 279

Query: 175 LIHIALGYITSNDKTAFNFGIFDDALTSGVVYSTDLICKLCYCCWWGLQNLSSLGQGLKT 234
            I+       SN  TA ++GIFDDAL SGVV STD I K  YCCWWGLQNLSSLGQGLKT
Sbjct: 280 CINDVCSGTASNVTTALDYGIFDDALNSGVVSSTDFIWKFSYCCWWGLQNLSSLGQGLKT 338

Query: 235 SQHIWEISF 244
           S+ IWEI F
Sbjct: 340 SKDIWEIYF 338

[Close]

BLAST of CmaCh16G000640 vs. NCBI nr
Match: gi|449465194|ref|XP_004150313.1| (PREDICTED: cyclic nucleotide-gated ion channel 1 isoform X1 [Cucumis sativus])

HSP 1 Score: 132.1 bits (331), Expect = 1.3e-27
Identity = 84/191 (43.98%), Postives = 108/191 (56.54%), Query Frame = 1


Query: 54  VVNLLVIPAATKGSHFSMALRPLQFVLIIQHLPRALRIYKFLKKVRLSSSLFPNSTRGNA 113
           VV L++IP+  +G+ F  A+R L+++LI+Q+LPR  RIY FLKKVR +SS+ P S    A
Sbjct: 186 VVVLILIPSL-RGNGFIYAVRSLKYILIVQYLPRVFRIYSFLKKVRWTSSILPESAGAKA 245

Query: 114 IFNLFLYMLSSH-SSELVYSFIAFAFILALTQYVSDPSRPLEPFGTCLLLSVKQISCRKG 173
           +FNLFLYML+SH      Y F          +  ++ S      G    LSV  I   K 
Sbjct: 246 VFNLFLYMLASHVIGAFWYLFTIERKTTCWEENYTNWSLNCNYVGN---LSVDTICSPK- 305

Query: 174 VALIHIALGYITSNDKTAFNFGIFDDALTSGVVYSTDLICKLCYCCWWGLQNLSSLGQGL 233
                        ND  +FNFGIF DAL   +V S +++ K   C WWGLQ LSSLGQ L
Sbjct: 306 -----------AENDSNSFNFGIFKDALP--IVGSREIVKKFSLCFWWGLQKLSSLGQDL 358

Query: 234 KTSQHIWEISF 244
           KTS H+WEI F
Sbjct: 366 KTSNHLWEIYF 358

[Close]

BLAST of CmaCh16G000640 vs. NCBI nr
Match: gi|778681910|ref|XP_011651608.1| (PREDICTED: cyclic nucleotide-gated ion channel 1 isoform X2 [Cucumis sativus])

HSP 1 Score: 132.1 bits (331), Expect = 1.3e-27
Identity = 84/191 (43.98%), Postives = 108/191 (56.54%), Query Frame = 1


Query: 54  VVNLLVIPAATKGSHFSMALRPLQFVLIIQHLPRALRIYKFLKKVRLSSSLFPNSTRGNA 113
           VV L++IP+  +G+ F  A+R L+++LI+Q+LPR  RIY FLKKVR +SS+ P S    A
Sbjct: 46  VVVLILIPSL-RGNGFIYAVRSLKYILIVQYLPRVFRIYSFLKKVRWTSSILPESAGAKA 105

Query: 114 IFNLFLYMLSSH-SSELVYSFIAFAFILALTQYVSDPSRPLEPFGTCLLLSVKQISCRKG 173
           +FNLFLYML+SH      Y F          +  ++ S      G    LSV  I   K 
Sbjct: 106 VFNLFLYMLASHVIGAFWYLFTIERKTTCWEENYTNWSLNCNYVGN---LSVDTICSPK- 165

Query: 174 VALIHIALGYITSNDKTAFNFGIFDDALTSGVVYSTDLICKLCYCCWWGLQNLSSLGQGL 233
                        ND  +FNFGIF DAL   +V S +++ K   C WWGLQ LSSLGQ L
Sbjct: 166 -----------AENDSNSFNFGIFKDALP--IVGSREIVKKFSLCFWWGLQKLSSLGQDL 218

Query: 234 KTSQHIWEISF 244
           KTS H+WEI F
Sbjct: 226 KTSNHLWEIYF 218

[Close]

BLAST of CmaCh16G000640 vs. NCBI nr
Match: gi|659077706|ref|XP_008439340.1| (PREDICTED: cyclic nucleotide-gated ion channel 1-like isoform X1 [Cucumis melo])

HSP 1 Score: 124.4 bits (311), Expect = 2.8e-25
Identity = 80/190 (42.11%), Postives = 105/190 (55.26%), Query Frame = 1


Query: 54  VVNLLVIPAATKGSHFSMALRPLQFVLIIQHLPRALRIYKFLKKVRLSSSLFPNSTRGNA 113
           VV L++IP+  +G+ F  A+R L+++LI+Q+LPR  RIY FLKKVR +SS+ P S    A
Sbjct: 252 VVVLILIPSL-RGNGFIYAVRSLKYILIVQYLPRVFRIYSFLKKVRWTSSILPESAGAKA 311

Query: 114 IFNLFLYMLSSHSSELVYSFIAFAFILALTQYVSDPSRPLEPFGTCLLLSVKQISCRKGV 173
            FNLFLYML+SH        +  AF    T  V   +   E   T   L+   +      
Sbjct: 312 AFNLFLYMLASH--------VIGAFWYLFT--VERKTTCWEESYTNWPLNCNYVGNLSAN 371

Query: 174 ALIHIALGYITSNDKTAFNFGIFDDALTSGVVYSTDLICKLCYCCWWGLQNLSSLGQGLK 233
                       N   +F+FGIF DAL   +V S  ++ KL  C WWGLQ LSSLGQ LK
Sbjct: 372 LSADTICSPKAENASNSFDFGIFKDALR--IVGSRKIVKKLSLCFWWGLQKLSSLGQDLK 428

Query: 234 TSQHIWEISF 244
           TS H+WE+ F
Sbjct: 432 TSNHLWEVYF 428

The following BLAST results are available for this feature:

BLAST of CmaCh16G000640 vs. Swiss-Prot


Match Name	E-value	Identity	Description
CNGC1_ARATH	9.0e-24	40.21	Cyclic nucleotide-gated ion channel 1 OS=Arabidopsis thaliana GN=CNGC1 PE=1 SV=1	[more]
CNGC5_ARATH	5.1e-19	33.16	Probable cyclic nucleotide-gated ion channel 5 OS=Arabidopsis thaliana GN=CNGC5 ...	[more]
CNGC3_ARATH	8.7e-19	36.41	Probable cyclic nucleotide-gated ion channel 3 OS=Arabidopsis thaliana GN=CNGC3 ...	[more]
CNG10_ARATH	4.3e-18	33.50	Probable cyclic nucleotide-gated ion channel 10 OS=Arabidopsis thaliana GN=CNGC1...	[more]
CNGC9_ARATH	2.8e-17	29.23	Putative cyclic nucleotide-gated ion channel 9 OS=Arabidopsis thaliana GN=CNGC9 ...	[more]

BLAST of CmaCh16G000640 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L8K4_CUCSA	6.1e-35	48.15	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G607120 PE=4 SV=1	[more]
A0A0A0LDV9_CUCSA	9.4e-28	43.98	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G607130 PE=4 SV=1	[more]
E0CUJ3_VITVI	2.0e-22	40.10	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_16s0050g02560 PE=4 SV=...	[more]
D7MSU7_ARALL	2.6e-22	39.69	Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRA...	[more]
A0A151TS64_CAJCA	4.5e-22	38.14	Cyclic nucleotide-gated ion channel 1 OS=Cajanus cajan GN=KK1_009077 PE=4 SV=1	[more]

BLAST of CmaCh16G000640 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G53130.1	5.1e-25	40.21	cyclic nucleotide gated channel 1	[more]
AT5G57940.1	2.9e-20	33.16	cyclic nucleotide gated channel 5	[more]
AT2G46430.1	4.9e-20	36.41	cyclic nucleotide gated channel 3	[more]
AT1G01340.2	2.4e-19	33.50	cyclic nucleotide gated channel 10	[more]
AT4G30560.1	1.6e-18	29.23	cyclic nucleotide gated channel 9	[more]

BLAST of CmaCh16G000640 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449465204\|ref\|XP_004150318.1\|	8.7e-35	48.15	PREDICTED: cyclic nucleotide-gated ion channel 1-like isoform X1 [Cucumis sativu...	[more]
gi\|778681901\|ref\|XP_011651606.1\|	8.7e-35	48.15	PREDICTED: cyclic nucleotide-gated ion channel 1-like isoform X2 [Cucumis sativu...	[more]
gi\|449465194\|ref\|XP_004150313.1\|	1.3e-27	43.98	PREDICTED: cyclic nucleotide-gated ion channel 1 isoform X1 [Cucumis sativus]	[more]
gi\|778681910\|ref\|XP_011651608.1\|	1.3e-27	43.98	PREDICTED: cyclic nucleotide-gated ion channel 1 isoform X2 [Cucumis sativus]	[more]
gi\|659077706\|ref\|XP_008439340.1\|	2.8e-25	42.11	PREDICTED: cyclic nucleotide-gated ion channel 1-like isoform X1 [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006811	ion transport
biological_process	GO:0034220	ion transmembrane transport
biological_process	GO:0071805	potassium ion transmembrane transport
biological_process	GO:0042391	regulation of membrane potential
biological_process	GO:0055085	transmembrane transport
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005887	integral component of plasma membrane
cellular_component	GO:0016020	membrane
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0005216	ion channel activity
molecular_function	GO:0005249	voltage-gated potassium channel activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh16G000640.1	CmaCh16G000640.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR10217	VOLTAGE AND LIGAND GATED POTASSIUM CHANNEL	coord: 187..243 score: 3.7E-31coord: 54..139 score: 3.7
None	No IPR available	PANTHER	PTHR10217:SF465	CYCLIC NUCLEOTIDE-GATED ION CHANNEL 11-RELATED	coord: 187..243 score: 3.7E-31coord: 54..139 score: 3.7

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh16G000640	CmoCh16G000690	Cucurbita moschata (Rifu)	cmacmoB322
CmaCh16G000640	CmoCh18G013360	Cucurbita moschata (Rifu)	cmacmoB327
CmaCh16G000640	CmoCh02G011370	Cucurbita moschata (Rifu)	cmacmoB333
CmaCh16G000640	Lsi05G000840	Bottle gourd (USVL1VR-Ls)	cmalsiB318
CmaCh16G000640	Cp4.1LG05g06080	Cucurbita pepo (Zucchini)	cmacpeB358
CmaCh16G000640	Cp4.1LG09g00460	Cucurbita pepo (Zucchini)	cmacpeB339
CmaCh16G000640	Cp4.1LG14g06530	Cucurbita pepo (Zucchini)	cmacpeB344
CmaCh16G000640	MELO3C005876.2	Melon (DHL92) v3.6.1	cmamedB326
CmaCh16G000640	MELO3C031845.2	Melon (DHL92) v3.6.1	cmamedB339
CmaCh16G000640	CsaV3_3G028070	Cucumber (Chinese Long) v3	cmacucB0378
CmaCh16G000640	CsaV3_5G000590	Cucumber (Chinese Long) v3	cmacucB0402
CmaCh16G000640	Cla97C01G000550	Watermelon (97103) v2	cmawmbB324
CmaCh16G000640	Cla97C05G091040	Watermelon (97103) v2	cmawmbB346
CmaCh16G000640	Bhi01G001090	Wax gourd	cmawgoB0439
CmaCh16G000640	Bhi12G000550	Wax gourd	cmawgoB0428
CmaCh16G000640	CsGy5G000520	Cucumber (Gy14) v2	cgybcmaB618
CmaCh16G000640	CsGy3G024820	Cucumber (Gy14) v2	cgybcmaB337
CmaCh16G000640	Carg20349	Silver-seed gourd	carcmaB0752
CmaCh16G000640	Carg15076	Silver-seed gourd	carcmaB1366

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmaCh16G000640	CmaCh18G013070	Cucurbita maxima (Rimu)	cmacmaB338
CmaCh16G000640	CmaCh02G011090	Cucurbita maxima (Rimu)	cmacmaB346

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh16G000640	Cucurbita maxima (Rimu)	cmacmaB243
CmaCh16G000640	Cucurbita maxima (Rimu)	cmacmaB300
CmaCh16G000640	Cucumber (Gy14) v1	cgycmaB0600
CmaCh16G000640	Cucurbita moschata (Rifu)	cmacmoB319
CmaCh16G000640	Wild cucumber (PI 183967)	cmacpiB346
CmaCh16G000640	Cucumber (Chinese Long) v2	cmacuB342
CmaCh16G000640	Melon (DHL92) v3.5.1	cmameB283
CmaCh16G000640	Melon (DHL92) v3.5.1	cmameB296
CmaCh16G000640	Watermelon (Charleston Gray)	cmawcgB289
CmaCh16G000640	Watermelon (Charleston Gray)	cmawcgB295
CmaCh16G000640	Watermelon (Charleston Gray)	cmawcgB296
CmaCh16G000640	Watermelon (97103) v1	cmawmB316
CmaCh16G000640	Watermelon (97103) v1	cmawmB318
CmaCh16G000640	Cucurbita pepo (Zucchini)	cmacpeB343
CmaCh16G000640	Bottle gourd (USVL1VR-Ls)	cmalsiB298
CmaCh16G000640	Bottle gourd (USVL1VR-Ls)	cmalsiB320
CmaCh16G000640	Cucumber (Gy14) v2	cgybcmaB336
CmaCh16G000640	Melon (DHL92) v3.6.1	cmamedB332
CmaCh16G000640	Melon (DHL92) v3.6.1	cmamedB338
CmaCh16G000640	Melon (DHL92) v3.6.1	cmamedB347
CmaCh16G000640	Silver-seed gourd	carcmaB0713
CmaCh16G000640	Cucumber (Chinese Long) v3	cmacucB0398
CmaCh16G000640	Cucumber (Chinese Long) v3	cmacucB0376
CmaCh16G000640	Watermelon (97103) v2	cmawmbB344