CmaCh12G010860.1 (mRNA) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CAAAATGGATATCTCTTCAAATTGGCTATAAATGTCACTACACATTTGCATCCCATAACCCATAAGTTTTCGAACAAATTAATGATGTTGTGTAAGTCACTCGTCGCCTTTAGCTACCTATGTCTAGTCATGGCTGCGTCCTCTATCGCTCAAAGTCCTCCCGTGCTCGACATAGAGGGCCGACCTCTAGAGATCAACGTCGAGTACTTCATCAAGCCTGCCATCACTGACGTCGCTGGAAATCTCACCTTATTAACCCGCAAAGGCGATCAGTGCCCGTTTCATGTTGGTCAAGTACCACTTCGTTCACAAGAAATAGGTATTATTACATCACTATCGAACTCAAAAACTCAATTTAATCAGTGATACCATTAGAAAACTCTTGATTATGTTATGAATTCTTAACCATAGGTTTCGGGGTCACCTTTACACCCTACCTACCGAGTGAAGATATGATCAGAGAAGGGAGGGATTTGAAGGTTGTGTTTCAAGCATTTTCGATCTGCATAACGTCGACTGCATGGAGAGTCGGGGAGGCAGATCCTACCACTGGAAGGAGGTTTGTCGAGACTGGGGACGACGACACTGCCACCGGGTACTTTAGGATCGACAGGGACAACTTTGGTGTTTATAATATAGGATGGTGTCCCTCGGATGTCCCTATTAGAGGGAGGCCAAGGTGTGGAAGGGCTGGAATTTTGATTGAGAAAGGCTTGAGGCTGTTGGCTTTGGATGGCTCAGCGTTTCCTTTTGAGTTTGTGAGAGCTTGAGACAAGACCATGCAATTTGTTGCAATTGCATTAAATTAAATAATACTCTTGTTAAGTATTTTAGTTTATTTGATTAAAAAAATAATTAATAAAGGAATTCCGACGTTTTAGATTTAGTTTCTATGTCATTTTTAGGGTAAGAGCTCGAGCCCACGGCCAGGAGATATTGTCCTATTTGGACTTTCGTTCAAGGTTTTAAAACGGGTCTCAAGATTATAAAAATGTTTCGTTCCCC CAAAATGGATATCTCTTCAAATTGGCTATAAATGTCACTACACATTTGCATCCCATAACCCATAAGTTTTCGAACAAATTAATGATGTTGTGTAAGTCACTCGTCGCCTTTAGCTACCTATGTCTAGTCATGGCTGCGTCCTCTATCGCTCAAAGTCCTCCCGTGCTCGACATAGAGGGCCGACCTCTAGAGATCAACGTCGAGTACTTCATCAAGCCTGCCATCACTGACGTCGCTGGAAATCTCACCTTATTAACCCGCAAAGGCGATCAGTGCCCGTTTCATGTTGGTCAAGTACCACTTCGTTCACAAGAAATAGGTTTCGGGGTCACCTTTACACCCTACCTACCGAGTGAAGATATGATCAGAGAAGGGAGGGATTTGAAGGTTGTGTTTCAAGCATTTTCGATCTGCATAACGTCGACTGCATGGAGAGTCGGGGAGGCAGATCCTACCACTGGAAGGAGGTTTGTCGAGACTGGGGACGACGACACTGCCACCGGGTACTTTAGGATCGACAGGGACAACTTTGGTGTTTATAATATAGGATGGTGTCCCTCGGATGTCCCTATTAGAGGGAGGCCAAGGTGTGGAAGGGCTGGAATTTTGATTGAGAAAGGCTTGAGGCTGTTGGCTTTGGATGGCTCAGCGTTTCCTTTTGAGTTTGTGAGAGCTTGAGACAAGACCATGCAATTTGTTGCAATTGCATTAAATTAAATAATACTCTTGTTAAGTATTTTAGTTTATTTGATTAAAAAAATAATTAATAAAGGAATTCCGACGTTTTAGATTTAGTTTCTATGTCATTTTTAGGGTAAGAGCTCGAGCCCACGGCCAGGAGATATTGTCCTATTTGGACTTTCGTTCAAGGTTTTAAAACGGGTCTCAAGATTATAAAAATGTTTCGTTCCCC ATGATGTTGTGTAAGTCACTCGTCGCCTTTAGCTACCTATGTCTAGTCATGGCTGCGTCCTCTATCGCTCAAAGTCCTCCCGTGCTCGACATAGAGGGCCGACCTCTAGAGATCAACGTCGAGTACTTCATCAAGCCTGCCATCACTGACGTCGCTGGAAATCTCACCTTATTAACCCGCAAAGGCGATCAGTGCCCGTTTCATGTTGGTCAAGTACCACTTCGTTCACAAGAAATAGGTTTCGGGGTCACCTTTACACCCTACCTACCGAGTGAAGATATGATCAGAGAAGGGAGGGATTTGAAGGTTGTGTTTCAAGCATTTTCGATCTGCATAACGTCGACTGCATGGAGAGTCGGGGAGGCAGATCCTACCACTGGAAGGAGGTTTGTCGAGACTGGGGACGACGACACTGCCACCGGGTACTTTAGGATCGACAGGGACAACTTTGGTGTTTATAATATAGGATGGTGTCCCTCGGATGTCCCTATTAGAGGGAGGCCAAGGTGTGGAAGGGCTGGAATTTTGATTGAGAAAGGCTTGAGGCTGTTGGCTTTGGATGGCTCAGCGTTTCCTTTTGAGTTTGTGAGAGCTTGA MMLCKSLVAFSYLCLVMAASSIAQSPPVLDIEGRPLEINVEYFIKPAITDVAGNLTLLTRKGDQCPFHVGQVPLRSQEIGFGVTFTPYLPSEDMIREGRDLKVVFQAFSICITSTAWRVGEADPTTGRRFVETGDDDTATGYFRIDRDNFGVYNIGWCPSDVPIRGRPRCGRAGILIEKGLRLLALDGSAFPFEFVRA
BLAST of CmaCh12G010860.1 vs. Swiss-Prot
Match: MIRA_SYNDU (Miraculin OS=Synsepalum dulcificum PE=1 SV=3) HSP 1 Score: 92.4 bits (228), Expect = 5.8e-18 Identity = 71/203 (34.98%), Postives = 101/203 (49.75%), Query Frame = 1
BLAST of CmaCh12G010860.1 vs. Swiss-Prot
Match: IAAS_ORYSJ (Alpha-amylase/subtilisin inhibitor OS=Oryza sativa subsp. japonica GN=RASI PE=1 SV=2) HSP 1 Score: 75.1 bits (183), Expect = 9.6e-13 Identity = 50/137 (36.50%), Postives = 69/137 (50.36%), Query Frame = 1
BLAST of CmaCh12G010860.1 vs. Swiss-Prot
Match: IAAS_WHEAT (Endogenous alpha-amylase/subtilisin inhibitor OS=Triticum aestivum PE=1 SV=1) HSP 1 Score: 73.6 bits (179), Expect = 2.8e-12 Identity = 43/129 (33.33%), Postives = 68/129 (52.71%), Query Frame = 1
BLAST of CmaCh12G010860.1 vs. Swiss-Prot
Match: ASP_THECC (21 kDa seed protein OS=Theobroma cacao GN=ASP PE=2 SV=1) HSP 1 Score: 62.8 bits (151), Expect = 5.0e-09 Identity = 48/164 (29.27%), Postives = 76/164 (46.34%), Query Frame = 1
BLAST of CmaCh12G010860.1 vs. Swiss-Prot
Match: PIP21_PEA (Kunitz-type trypsin inhibitor-like 1 protein OS=Pisum sativum GN=PIP20-1 PE=1 SV=2) HSP 1 Score: 61.2 bits (147), Expect = 1.4e-08 Identity = 60/208 (28.85%), Postives = 88/208 (42.31%), Query Frame = 1
BLAST of CmaCh12G010860.1 vs. TrEMBL
Match: A0A0A0LGB4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G021000 PE=4 SV=1) HSP 1 Score: 316.6 bits (810), Expect = 2.1e-83 Identity = 153/200 (76.50%), Postives = 169/200 (84.50%), Query Frame = 1
BLAST of CmaCh12G010860.1 vs. TrEMBL
Match: D1KFM4_9ROSI (Kunitz-type protease inhibitor KPI-F4 OS=Populus trichocarpa x Populus nigra PE=2 SV=1) HSP 1 Score: 222.2 bits (565), Expect = 5.4e-55 Identity = 119/195 (61.03%), Postives = 134/195 (68.72%), Query Frame = 1
BLAST of CmaCh12G010860.1 vs. TrEMBL
Match: G0Z2L7_POPNI (Kunitz-type trypsin inhibitor C5 OS=Populus nigra PE=2 SV=1) HSP 1 Score: 222.2 bits (565), Expect = 5.4e-55 Identity = 118/195 (60.51%), Postives = 134/195 (68.72%), Query Frame = 1
BLAST of CmaCh12G010860.1 vs. TrEMBL
Match: D1KFM3_9ROSI (Kunitz-type protease inhibitor KPI-F4 OS=Populus trichocarpa x Populus deltoides PE=2 SV=1) HSP 1 Score: 222.2 bits (565), Expect = 5.4e-55 Identity = 119/195 (61.03%), Postives = 134/195 (68.72%), Query Frame = 1
BLAST of CmaCh12G010860.1 vs. TrEMBL
Match: B9N8J2_POPTR (Truncated Kunitz trypsin inhibitor family protein OS=Populus trichocarpa GN=POPTR_0004s00220g PE=4 SV=1) HSP 1 Score: 221.5 bits (563), Expect = 9.3e-55 Identity = 119/195 (61.03%), Postives = 134/195 (68.72%), Query Frame = 1
BLAST of CmaCh12G010860.1 vs. TAIR10
Match: AT1G73260.1 (AT1G73260.1 kunitz trypsin inhibitor 1) HSP 1 Score: 86.3 bits (212), Expect = 2.4e-17 Identity = 61/195 (31.28%), Postives = 90/195 (46.15%), Query Frame = 1
BLAST of CmaCh12G010860.1 vs. NCBI nr
Match: gi|449442849|ref|XP_004139193.1| (PREDICTED: endogenous alpha-amylase/subtilisin inhibitor-like [Cucumis sativus]) HSP 1 Score: 316.6 bits (810), Expect = 3.0e-83 Identity = 153/200 (76.50%), Postives = 169/200 (84.50%), Query Frame = 1
BLAST of CmaCh12G010860.1 vs. NCBI nr
Match: gi|659070428|ref|XP_008455022.1| (PREDICTED: miraculin-like isoform X2 [Cucumis melo]) HSP 1 Score: 308.1 bits (788), Expect = 1.1e-80 Identity = 149/200 (74.50%), Postives = 162/200 (81.00%), Query Frame = 1
BLAST of CmaCh12G010860.1 vs. NCBI nr
Match: gi|659070426|ref|XP_008455014.1| (PREDICTED: miraculin-like isoform X1 [Cucumis melo]) HSP 1 Score: 300.1 bits (767), Expect = 2.9e-78 Identity = 147/201 (73.13%), Postives = 161/201 (80.10%), Query Frame = 1
BLAST of CmaCh12G010860.1 vs. NCBI nr
Match: gi|449442847|ref|XP_004139192.1| (PREDICTED: miraculin-like [Cucumis sativus]) HSP 1 Score: 233.0 bits (593), Expect = 4.4e-58 Identity = 117/198 (59.09%), Postives = 135/198 (68.18%), Query Frame = 1
BLAST of CmaCh12G010860.1 vs. NCBI nr
Match: gi|242346705|gb|ACS92521.1| (Kunitz-type protease inhibitor KPI-F4 [Populus trichocarpa x Populus deltoides]) HSP 1 Score: 222.2 bits (565), Expect = 7.8e-55 Identity = 119/195 (61.03%), Postives = 134/195 (68.72%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
|