CmaCh11G017340.1 (mRNA) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh11G017340.1
Type	mRNA
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	ralf-like 19
Location	Cma_Chr11 : 11518067 .. 11518438 (-)
Sequence length	372

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAACAATGAAGATCTGCCTCTTTCTCCTCCTCGTCTTCGCCCTCGTTGCTCCGCTCTCCTTTGCCTTCCATGAAACCTCCCACGGTTCATCCCTCGTTGACGATAATTCTGAATATAGCTTCTTTGGTGGAGGCTCCTCCGAAGCCGAAGCCATGACTGAAGATAGTCGCCGACAACTCTTCGAATATGGATTCGCCTATAATAGGGAAGCTCGCAAGAGGTTTTTGACCTACTATGCACTTAGTAAGAATAATATCCCTTGTGGTCGTCGTGGTCACTCCTACTATGATTGCAAGAAGCGTAGAAGGATCAATCCTTATCGTCGTGGTTGTGCTGCCATCACTGGATGTGCTCGATTCACCGATTAA

mRNA sequence

ATGGAAACAATGAAGATCTGCCTCTTTCTCCTCCTCGTCTTCGCCCTCGTTGCTCCGCTCTCCTTTGCCTTCCATGAAACCTCCCACGGTTCATCCCTCGTTGACGATAATTCTGAATATAGCTTCTTTGGTGGAGGCTCCTCCGAAGCCGAAGCCATGACTGAAGATAGTCGCCGACAACTCTTCGAATATGGATTCGCCTATAATAGGGAAGCTCGCAAGAGGTTTTTGACCTACTATGCACTTAGTAAGAATAATATCCCTTGTGGTCGTCGTGGTCACTCCTACTATGATTGCAAGAAGCGTAGAAGGATCAATCCTTATCGTCGTGGTTGTGCTGCCATCACTGGATGTGCTCGATTCACCGATTAA

Coding sequence (CDS)

ATGGAAACAATGAAGATCTGCCTCTTTCTCCTCCTCGTCTTCGCCCTCGTTGCTCCGCTCTCCTTTGCCTTCCATGAAACCTCCCACGGTTCATCCCTCGTTGACGATAATTCTGAATATAGCTTCTTTGGTGGAGGCTCCTCCGAAGCCGAAGCCATGACTGAAGATAGTCGCCGACAACTCTTCGAATATGGATTCGCCTATAATAGGGAAGCTCGCAAGAGGTTTTTGACCTACTATGCACTTAGTAAGAATAATATCCCTTGTGGTCGTCGTGGTCACTCCTACTATGATTGCAAGAAGCGTAGAAGGATCAATCCTTATCGTCGTGGTTGTGCTGCCATCACTGGATGTGCTCGATTCACCGATTAA

Protein sequence

METMKICLFLLLVFALVAPLSFAFHETSHGSSLVDDNSEYSFFGGGSSEAEAMTEDSRRQLFEYGFAYNREARKRFLTYYALSKNNIPCGRRGHSYYDCKKRRRINPYRRGCAAITGCARFTD

Homology

[Close]

BLAST of CmaCh11G017340.1 vs. Swiss-Prot
Match: RLF19_ARATH (Protein RALF-like 19 OS=Arabidopsis thaliana GN=RALFL19 PE=3 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 8.4e-15
Identity = 39/69 (56.52%), Postives = 48/69 (69.57%), Query Frame = 1


Query: 54  TEDSRRQLFEYGFAYNREARKRFLTYYALSKNNIPCGRRGHSYYDCKKRRRINPYRRGCA 113
           +E +RRQL          AR+ +++Y AL KNN+PC RRG SYYDCKKR+R NPYRRGC+
Sbjct: 50  SETNRRQL---------AARRSYISYGALRKNNVPCSRRGRSYYDCKKRKRANPYRRGCS 109

Query: 114 AITGCARFT 123
            IT C R T
Sbjct: 110 VITHCYRQT 109

[Close]

BLAST of CmaCh11G017340.1 vs. Swiss-Prot
Match: RLF4_ARATH (Protein RALF-like 4 OS=Arabidopsis thaliana GN=RALFL4 PE=3 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 7.1e-14
Identity = 50/125 (40.00%), Postives = 69/125 (55.20%), Query Frame = 1


Query: 1   METMKICLFLLLVFALVAPLSFAFHETS----HGSSLVDDNSEYSFFGGGSSEAEAMTED 60
           M    + +F LL+ A+VA    A +  +    +G   + ++ E         E+   +E 
Sbjct: 1   MGVKMLLIFGLLILAMVAKSVNATYPLTKSCINGQGCIGEDDEL--------ESLMDSET 60

Query: 61  SRRQLFEYGFAYNREARKRFLTYYALSKNNIPCGRRGHSYYDCKKRRRINPYRRGCAAIT 120
           +RRQL            +R++ Y AL KNN+PC RRG SYYDCKKRRR NPYRRGC+AIT
Sbjct: 61  NRRQLAR---------GRRYIGYDALKKNNVPCSRRGRSYYDCKKRRRNNPYRRGCSAIT 108

Query: 121 GCARF 122
            C R+
Sbjct: 121 HCYRY 108

[Close]

BLAST of CmaCh11G017340.1 vs. Swiss-Prot
Match: RLF23_ARATH (Rapid alkalinization factor 23 OS=Arabidopsis thaliana GN=RALF23 PE=1 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 7.3e-11
Identity = 37/81 (45.68%), Postives = 50/81 (61.73%), Query Frame = 1


Query: 42  FFGGGS--SEAEAMTEDSRRQLFEYGFAYNREARKRFLTYYALSKNNIPCGRRGHSYYDC 101
           F+GGG    E E  +E +RR L          A +R+++Y AL +N IPC RRG SYY+C
Sbjct: 67  FYGGGEMGEEFEMDSEINRRIL----------ATRRYISYGALRRNTIPCSRRGASYYNC 126

Query: 102 KKRRRINPYRRGCAAITGCAR 121
           ++  + NPY RGC+AIT C R
Sbjct: 127 RRGAQANPYSRGCSAITRCRR 137

[Close]

BLAST of CmaCh11G017340.1 vs. Swiss-Prot
Match: RALF_TOBAC (Rapid alkalinization factor OS=Nicotiana tabacum GN=RALF PE=1 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 3.6e-10
Identity = 37/79 (46.84%), Postives = 48/79 (60.76%), Query Frame = 1


Query: 44  GGG--SSEAEAMTEDSRRQLFEYGFAYNRE--ARKRFLTYYALSKNNIPCGRRGHSYYDC 103
           GGG   S  E + E+     FE     NR   A K++++Y AL KN++PC RRG SYY+C
Sbjct: 38  GGGCKGSIGECIAEEEE---FELDSESNRRILATKKYISYGALQKNSVPCSRRGASYYNC 97

Query: 104 KKRRRINPYRRGCAAITGC 119
           K   + NPY RGC+AIT C
Sbjct: 98  KPGAQANPYSRGCSAITRC 113

[Close]

BLAST of CmaCh11G017340.1 vs. Swiss-Prot
Match: RLF22_ARATH (Protein RALF-like 22 OS=Arabidopsis thaliana GN=RALFL22 PE=3 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 1.1e-09
Identity = 41/111 (36.94%), Postives = 63/111 (56.76%), Query Frame = 1


Query: 13  VFALVAPLSFAFHETSH-GSSL--VDDNSEYSFFGGGSSEAEAMTEDSRRQLFEYGFAYN 72
           V A++A +  A   T   G SL  V   S   F G   S AE + E+   + F+   +  
Sbjct: 10  VIAILAIVISAVESTGDFGDSLDFVRAGSSSLFSGCTGSIAECIAEEEEME-FDSDISRR 69

Query: 73  REARKRFLTYYALSKNNIPCGRRGHSYYDCKKRRRINPYRRGCAAITGCAR 121
             A+K++++Y A+ +N++PC RRG SYY+C++  + NPY RGC+ IT C R
Sbjct: 70  ILAQKKYISYGAMRRNSVPCSRRGASYYNCQRGAQANPYSRGCSTITRCRR 119

[Close]

BLAST of CmaCh11G017340.1 vs. TrEMBL
Match: A0A0A0KHU4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G484570 PE=4 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 5.8e-23
Identity = 65/123 (52.85%), Postives = 78/123 (63.41%), Query Frame = 1


Query: 1   METMKICLFLLLVFALVAPLSFAFHETSHGSSLVDDNSEYSFFGGGSSEAEAMTEDSRRQ 60
           M + K+CLFLLL+  + APL  A  +    S    D  +Y F            EDSRR 
Sbjct: 1   MRSTKLCLFLLLIAVVAAPLCLALSDDWTRSYA--DVPDYDFTNSN--------EDSRRL 60

Query: 61  LFEYGFAYNREARKRFLTYYALSKNNIPCGRRGHSYYDCKKRRRINPYRRGCAAITGCAR 120
           LF+YGFAY +  + ++L Y AL KNNIPC  RG SYYDCKKR++ NPYRRGC AITGCAR
Sbjct: 61  LFQYGFAY-KYPKNKYLGYDALRKNNIPCRHRGRSYYDCKKRKKANPYRRGCIAITGCAR 112

Query: 121 FTD 124
           FTD
Sbjct: 121 FTD 112

[Close]

BLAST of CmaCh11G017340.1 vs. TrEMBL
Match: A0A0A0KCD7_CUCSA (F3H9.8 protein OS=Cucumis sativus GN=Csa_6G199790 PE=4 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 4.2e-21
Identity = 62/123 (50.41%), Postives = 79/123 (64.23%), Query Frame = 1


Query: 4   MKICLFLLLVFALVA---PLSFAFHETSHGSSLVDDNSEYSFFGGGSSEAEAMTEDSRRQ 63
           MK+ L LLL+ A +A   P++      ++G      N +Y+F+G          +DSRR 
Sbjct: 1   MKLGLCLLLLVAAIAITLPVALCDWTRAYG------NPDYAFWGTAEPATINDVDDSRRL 60

Query: 64  LFEYGFAYNREARKRFLTYYALSKNNIPCGRRGHSYYDCKKRRRINPYRRGCAAITGCAR 123
           LF+YGFAY +  + ++L Y AL KNN PC  RGHSYYDC KRR+ NPYRRGC AITGCAR
Sbjct: 61  LFQYGFAY-KYPKNKYLGYDALRKNNSPCRHRGHSYYDCTKRRKANPYRRGCIAITGCAR 116

[Close]

BLAST of CmaCh11G017340.1 vs. TrEMBL
Match: R0HVQ3_9BRAS (Uncharacterized protein OS=Capsella rubella GN=CARUB_v10024364mg PE=4 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 1.4e-13
Identity = 43/80 (53.75%), Postives = 54/80 (67.50%), Query Frame = 1


Query: 45  GGSSEAEAM--TEDSRRQLFEYGFAYNREARKRFLTYYALSKNNIPCGRRGHSYYDCKKR 104
           G   E E++  +E +RRQL          AR+ +++Y AL KNN+PCGRRG SYYDCKKR
Sbjct: 39  GEDDELESLMDSEANRRQL---------AARRSYISYGALKKNNVPCGRRGRSYYDCKKR 98

Query: 105 RRINPYRRGCAAITGCARFT 123
           +R NPYRRGC+ IT C R T
Sbjct: 99  KRANPYRRGCSVITHCYRQT 109

[Close]

BLAST of CmaCh11G017340.1 vs. TrEMBL
Match: M4EMR1_BRARP (Uncharacterized protein OS=Brassica rapa subsp. pekinensis PE=4 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 3.2e-13
Identity = 43/81 (53.09%), Postives = 53/81 (65.43%), Query Frame = 1


Query: 45  GGSSEAEAM--TEDSRRQLFEYGFAYNREARKRFLTYYALSKNNIPCGRRGHSYYDCKKR 104
           G   E E++  +E +RRQL            +R++ Y AL KNN+PC RRG SYYDCKKR
Sbjct: 24  GDDDELESLMDSETNRRQLAR---------GRRYIGYDALKKNNVPCNRRGRSYYDCKKR 83

Query: 105 RRINPYRRGCAAITGCARFTD 124
           RR NPYRRGC+AIT C RF +
Sbjct: 84  RRNNPYRRGCSAITHCYRFLE 95

[Close]

BLAST of CmaCh11G017340.1 vs. TrEMBL
Match: A0A061GMB1_THECC (Ralf-like 4, putative OS=Theobroma cacao GN=TCM_029845 PE=4 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 3.2e-13
Identity = 48/115 (41.74%), Postives = 69/115 (60.00%), Query Frame = 1


Query: 8   LFLLLVFALVAPLSFAFHETSHGSSLVDDNSEYSFFGGGSSEAEAMTEDSRRQLFEYGFA 67
           +FLLL  A+VA  S  FHE S G +   ++   S   G     +   ED  + L +    
Sbjct: 8   VFLLLALAMVAE-STTFHEASWGLTHFGNDELSSCIDG-----QCDVEDVSQTLMDSEIN 67

Query: 68  YNREARKRFLTYYALSKNNIPCGRRGHSYYDCKKRRRINPYRRGCAAITGCARFT 123
             + A+KR+++Y AL  N++PC RRG+SYY+C+ R+R NPY RGC+AIT C R+T
Sbjct: 68  RRQLAQKRYISYGALKANSVPCNRRGNSYYNCQNRKRANPYNRGCSAITHCYRYT 116

[Close]

BLAST of CmaCh11G017340.1 vs. TAIR10
Match: AT2G33775.1 (AT2G33775.1 ralf-like 19)

HSP 1 Score: 81.3 bits (199), Expect = 4.7e-16
Identity = 39/69 (56.52%), Postives = 48/69 (69.57%), Query Frame = 1


Query: 54  TEDSRRQLFEYGFAYNREARKRFLTYYALSKNNIPCGRRGHSYYDCKKRRRINPYRRGCA 113
           +E +RRQL          AR+ +++Y AL KNN+PC RRG SYYDCKKR+R NPYRRGC+
Sbjct: 50  SETNRRQL---------AARRSYISYGALRKNNVPCSRRGRSYYDCKKRKRANPYRRGCS 109

Query: 114 AITGCARFT 123
            IT C R T
Sbjct: 110 VITHCYRQT 109

[Close]

BLAST of CmaCh11G017340.1 vs. TAIR10
Match: AT1G28270.1 (AT1G28270.1 ralf-like 4)

HSP 1 Score: 78.2 bits (191), Expect = 4.0e-15
Identity = 50/125 (40.00%), Postives = 69/125 (55.20%), Query Frame = 1


Query: 1   METMKICLFLLLVFALVAPLSFAFHETS----HGSSLVDDNSEYSFFGGGSSEAEAMTED 60
           M    + +F LL+ A+VA    A +  +    +G   + ++ E         E+   +E 
Sbjct: 1   MGVKMLLIFGLLILAMVAKSVNATYPLTKSCINGQGCIGEDDEL--------ESLMDSET 60

Query: 61  SRRQLFEYGFAYNREARKRFLTYYALSKNNIPCGRRGHSYYDCKKRRRINPYRRGCAAIT 120
           +RRQL            +R++ Y AL KNN+PC RRG SYYDCKKRRR NPYRRGC+AIT
Sbjct: 61  NRRQLAR---------GRRYIGYDALKKNNVPCSRRGRSYYDCKKRRRNNPYRRGCSAIT 108

Query: 121 GCARF 122
            C R+
Sbjct: 121 HCYRY 108

[Close]

BLAST of CmaCh11G017340.1 vs. TAIR10
Match: AT3G16570.1 (AT3G16570.1 rapid alkalinization factor 23)

HSP 1 Score: 68.2 bits (165), Expect = 4.1e-12
Identity = 37/81 (45.68%), Postives = 50/81 (61.73%), Query Frame = 1


Query: 42  FFGGGS--SEAEAMTEDSRRQLFEYGFAYNREARKRFLTYYALSKNNIPCGRRGHSYYDC 101
           F+GGG    E E  +E +RR L          A +R+++Y AL +N IPC RRG SYY+C
Sbjct: 67  FYGGGEMGEEFEMDSEINRRIL----------ATRRYISYGALRRNTIPCSRRGASYYNC 126

Query: 102 KKRRRINPYRRGCAAITGCAR 121
           ++  + NPY RGC+AIT C R
Sbjct: 127 RRGAQANPYSRGCSAITRCRR 137

[Close]

BLAST of CmaCh11G017340.1 vs. TAIR10
Match: AT3G05490.1 (AT3G05490.1 ralf-like 22)

HSP 1 Score: 64.3 bits (155), Expect = 6.0e-11
Identity = 41/111 (36.94%), Postives = 63/111 (56.76%), Query Frame = 1


Query: 13  VFALVAPLSFAFHETSH-GSSL--VDDNSEYSFFGGGSSEAEAMTEDSRRQLFEYGFAYN 72
           V A++A +  A   T   G SL  V   S   F G   S AE + E+   + F+   +  
Sbjct: 10  VIAILAIVISAVESTGDFGDSLDFVRAGSSSLFSGCTGSIAECIAEEEEME-FDSDISRR 69

Query: 73  REARKRFLTYYALSKNNIPCGRRGHSYYDCKKRRRINPYRRGCAAITGCAR 121
             A+K++++Y A+ +N++PC RRG SYY+C++  + NPY RGC+ IT C R
Sbjct: 70  ILAQKKYISYGAMRRNSVPCSRRGASYYNCQRGAQANPYSRGCSTITRCRR 119

[Close]

BLAST of CmaCh11G017340.1 vs. TAIR10
Match: AT4G15800.1 (AT4G15800.1 ralf-like 33)

HSP 1 Score: 62.8 bits (151), Expect = 1.7e-10
Identity = 29/61 (47.54%), Postives = 40/61 (65.57%), Query Frame = 1


Query: 62  FEYGFAYNRE--ARKRFLTYYALSKNNIPCGRRGHSYYDCKKRRRINPYRRGCAAITGCA 121
           FE     NR   A  ++++Y AL +N +PC RRG SYY+C++  + NPY RGC+AIT C 
Sbjct: 56  FEMDSEINRRILATTKYISYGALRRNTVPCSRRGASYYNCRRGAQANPYSRGCSAITRCR 115

[Close]

BLAST of CmaCh11G017340.1 vs. NCBI nr
Match: gi|449461879|ref|XP_004148669.1| (PREDICTED: protein RALF-like 19 [Cucumis sativus])

HSP 1 Score: 115.2 bits (287), Expect = 8.3e-23
Identity = 65/123 (52.85%), Postives = 78/123 (63.41%), Query Frame = 1


Query: 1   METMKICLFLLLVFALVAPLSFAFHETSHGSSLVDDNSEYSFFGGGSSEAEAMTEDSRRQ 60
           M + K+CLFLLL+  + APL  A  +    S    D  +Y F            EDSRR 
Sbjct: 1   MRSTKLCLFLLLIAVVAAPLCLALSDDWTRSYA--DVPDYDFTNSN--------EDSRRL 60

Query: 61  LFEYGFAYNREARKRFLTYYALSKNNIPCGRRGHSYYDCKKRRRINPYRRGCAAITGCAR 120
           LF+YGFAY +  + ++L Y AL KNNIPC  RG SYYDCKKR++ NPYRRGC AITGCAR
Sbjct: 61  LFQYGFAY-KYPKNKYLGYDALRKNNIPCRHRGRSYYDCKKRKKANPYRRGCIAITGCAR 112

Query: 121 FTD 124
           FTD
Sbjct: 121 FTD 112

[Close]

BLAST of CmaCh11G017340.1 vs. NCBI nr
Match: gi|659080853|ref|XP_008441015.1| (PREDICTED: protein RALF-like 19 [Cucumis melo])

HSP 1 Score: 111.3 bits (277), Expect = 1.2e-21
Identity = 62/124 (50.00%), Postives = 78/124 (62.90%), Query Frame = 1


Query: 1   METMKICLFLLLVFALVAPLSFAFHET-SHGSSLVDDNSEYSFFGGGSSEAEAMTEDSRR 60
           M +MK+ LFLL++  + APL  AF +  +H             +   + +     EDSRR
Sbjct: 1   MRSMKLGLFLLVIAVVAAPLCLAFSDDWTHA------------YAAPNYDFTTNNEDSRR 60

Query: 61  QLFEYGFAYNREARKRFLTYYALSKNNIPCGRRGHSYYDCKKRRRINPYRRGCAAITGCA 120
            LF+YGFAY +  + ++L Y AL KNN PC  RG SYYDCKKRR+ NPYRRGC AITGCA
Sbjct: 61  LLFQYGFAY-KYPKNKYLGYDALRKNNSPCRHRGRSYYDCKKRRKANPYRRGCIAITGCA 111

Query: 121 RFTD 124
           RFTD
Sbjct: 121 RFTD 111

[Close]

BLAST of CmaCh11G017340.1 vs. NCBI nr
Match: gi|449466199|ref|XP_004150814.1| (PREDICTED: protein RALF-like 4 [Cucumis sativus])

HSP 1 Score: 109.0 bits (271), Expect = 6.0e-21
Identity = 62/123 (50.41%), Postives = 79/123 (64.23%), Query Frame = 1


Query: 4   MKICLFLLLVFALVA---PLSFAFHETSHGSSLVDDNSEYSFFGGGSSEAEAMTEDSRRQ 63
           MK+ L LLL+ A +A   P++      ++G      N +Y+F+G          +DSRR 
Sbjct: 1   MKLGLCLLLLVAAIAITLPVALCDWTRAYG------NPDYAFWGTAEPATINDVDDSRRL 60

Query: 64  LFEYGFAYNREARKRFLTYYALSKNNIPCGRRGHSYYDCKKRRRINPYRRGCAAITGCAR 123
           LF+YGFAY +  + ++L Y AL KNN PC  RGHSYYDC KRR+ NPYRRGC AITGCAR
Sbjct: 61  LFQYGFAY-KYPKNKYLGYDALRKNNSPCRHRGHSYYDCTKRRKANPYRRGCIAITGCAR 116

[Close]

BLAST of CmaCh11G017340.1 vs. NCBI nr
Match: gi|1009109354|ref|XP_015889777.1| (PREDICTED: protein RALF-like 19 [Ziziphus jujuba])

HSP 1 Score: 92.4 bits (228), Expect = 5.8e-16
Identity = 56/121 (46.28%), Postives = 74/121 (61.16%), Query Frame = 1


Query: 4   MKICL-FLLLVFALVAPLSFAFHETSHGSSLVDDNSEYSFFGGGSSEAEAMTEDSRRQLF 63
           +K+CL FLLL  A+VA  S +FH+ S G   +   S   F G   +E    +E SRR L 
Sbjct: 3   VKLCLIFLLLALAVVAEAS-SFHDASWGLDHLSHGSVGDFIGE-DNEMLMDSEASRRAL- 62

Query: 64  EYGFAYNREARKRFLTYYALSKNNIPCGRRGHSYYDCKKRRRINPYRRGCAAITGCARFT 123
                      +++++Y AL KN +PCGRRG SYY+C+KR+R NPY+RGC  IT CARFT
Sbjct: 63  --------AGGRKYISYSALKKNRVPCGRRGQSYYNCQKRQRANPYKRGCTVITHCARFT 112

[Close]

BLAST of CmaCh11G017340.1 vs. NCBI nr
Match: gi|695043794|ref|XP_009409606.1| (PREDICTED: protein RALF-like 22 [Musa acuminata subsp. malaccensis])

HSP 1 Score: 84.3 bits (207), Expect = 1.6e-13
Identity = 38/75 (50.67%), Postives = 51/75 (68.00%), Query Frame = 1


Query: 49  EAEAMTEDSRRQLFEYGFAYNREARKRFLTYYALSKNNIPCGRRGHSYYDCKKRRRINPY 108
           E +   ED+RR      F Y    R+RF++Y ALS++ +PC RRGHSYY+C++  R NPY
Sbjct: 65  EPDMEPEDARR------FLYRANGRQRFISYGALSRDRVPCNRRGHSYYNCRRSGRANPY 124

Query: 109 RRGCAAITGCARFTD 124
           RRGC+ IT CAR+ D
Sbjct: 125 RRGCSVITRCARYLD 133

The following BLAST results are available for this feature:

BLAST of CmaCh11G017340.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RLF19_ARATH	8.4e-15	56.52	Protein RALF-like 19 OS=Arabidopsis thaliana GN=RALFL19 PE=3 SV=1	[more]
RLF4_ARATH	7.1e-14	40.00	Protein RALF-like 4 OS=Arabidopsis thaliana GN=RALFL4 PE=3 SV=1	[more]
RLF23_ARATH	7.3e-11	45.68	Rapid alkalinization factor 23 OS=Arabidopsis thaliana GN=RALF23 PE=1 SV=1	[more]
RALF_TOBAC	3.6e-10	46.84	Rapid alkalinization factor OS=Nicotiana tabacum GN=RALF PE=1 SV=1	[more]
RLF22_ARATH	1.1e-09	36.94	Protein RALF-like 22 OS=Arabidopsis thaliana GN=RALFL22 PE=3 SV=1	[more]

BLAST of CmaCh11G017340.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KHU4_CUCSA	5.8e-23	52.85	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G484570 PE=4 SV=1	[more]
A0A0A0KCD7_CUCSA	4.2e-21	50.41	F3H9.8 protein OS=Cucumis sativus GN=Csa_6G199790 PE=4 SV=1	[more]
R0HVQ3_9BRAS	1.4e-13	53.75	Uncharacterized protein OS=Capsella rubella GN=CARUB_v10024364mg PE=4 SV=1	[more]
M4EMR1_BRARP	3.2e-13	53.09	Uncharacterized protein OS=Brassica rapa subsp. pekinensis PE=4 SV=1	[more]
A0A061GMB1_THECC	3.2e-13	41.74	Ralf-like 4, putative OS=Theobroma cacao GN=TCM_029845 PE=4 SV=1	[more]

BLAST of CmaCh11G017340.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G33775.1	4.7e-16	56.52	ralf-like 19	[more]
AT1G28270.1	4.0e-15	40.00	ralf-like 4	[more]
AT3G16570.1	4.1e-12	45.68	rapid alkalinization factor 23	[more]
AT3G05490.1	6.0e-11	36.94	ralf-like 22	[more]
AT4G15800.1	1.7e-10	47.54	ralf-like 33	[more]

BLAST of CmaCh11G017340.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449461879\|ref\|XP_004148669.1\|	8.3e-23	52.85	PREDICTED: protein RALF-like 19 [Cucumis sativus]	[more]
gi\|659080853\|ref\|XP_008441015.1\|	1.2e-21	50.00	PREDICTED: protein RALF-like 19 [Cucumis melo]	[more]
gi\|449466199\|ref\|XP_004150814.1\|	6.0e-21	50.41	PREDICTED: protein RALF-like 4 [Cucumis sativus]	[more]
gi\|1009109354\|ref\|XP_015889777.1\|	5.8e-16	46.28	PREDICTED: protein RALF-like 19 [Ziziphus jujuba]	[more]
gi\|695043794\|ref\|XP_009409606.1\|	1.6e-13	50.67	PREDICTED: protein RALF-like 22 [Musa acuminata subsp. malaccensis]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR008801	RALF

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmaCh11G017340	CmaCh11G017340	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmaCh11G017340.1	CmaCh11G017340.1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh11G017340.1.CDS.1	CmaCh11G017340.1.CDS.1	CDS

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh11G017340.1.exon.1	CmaCh11G017340.1.exon.1	exon

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008801	Rapid ALkalinization Factor	PFAM	PF05498	RALF	coord: 58..120 score: 9.2
None	No IPR available	PANTHER	PTHR33136	FAMILY NOT NAMED	coord: 6..122 score: 2.1