CmaCh11G017340 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh11G017340
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	ralf-like 19
Location	Cma_Chr11 : 11518067 .. 11518438 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAACAATGAAGATCTGCCTCTTTCTCCTCCTCGTCTTCGCCCTCGTTGCTCCGCTCTCCTTTGCCTTCCATGAAACCTCCCACGGTTCATCCCTCGTTGACGATAATTCTGAATATAGCTTCTTTGGTGGAGGCTCCTCCGAAGCCGAAGCCATGACTGAAGATAGTCGCCGACAACTCTTCGAATATGGATTCGCCTATAATAGGGAAGCTCGCAAGAGGTTTTTGACCTACTATGCACTTAGTAAGAATAATATCCCTTGTGGTCGTCGTGGTCACTCCTACTATGATTGCAAGAAGCGTAGAAGGATCAATCCTTATCGTCGTGGTTGTGCTGCCATCACTGGATGTGCTCGATTCACCGATTAA

mRNA sequence

ATGGAAACAATGAAGATCTGCCTCTTTCTCCTCCTCGTCTTCGCCCTCGTTGCTCCGCTCTCCTTTGCCTTCCATGAAACCTCCCACGGTTCATCCCTCGTTGACGATAATTCTGAATATAGCTTCTTTGGTGGAGGCTCCTCCGAAGCCGAAGCCATGACTGAAGATAGTCGCCGACAACTCTTCGAATATGGATTCGCCTATAATAGGGAAGCTCGCAAGAGGTTTTTGACCTACTATGCACTTAGTAAGAATAATATCCCTTGTGGTCGTCGTGGTCACTCCTACTATGATTGCAAGAAGCGTAGAAGGATCAATCCTTATCGTCGTGGTTGTGCTGCCATCACTGGATGTGCTCGATTCACCGATTAA

Coding sequence (CDS)

ATGGAAACAATGAAGATCTGCCTCTTTCTCCTCCTCGTCTTCGCCCTCGTTGCTCCGCTCTCCTTTGCCTTCCATGAAACCTCCCACGGTTCATCCCTCGTTGACGATAATTCTGAATATAGCTTCTTTGGTGGAGGCTCCTCCGAAGCCGAAGCCATGACTGAAGATAGTCGCCGACAACTCTTCGAATATGGATTCGCCTATAATAGGGAAGCTCGCAAGAGGTTTTTGACCTACTATGCACTTAGTAAGAATAATATCCCTTGTGGTCGTCGTGGTCACTCCTACTATGATTGCAAGAAGCGTAGAAGGATCAATCCTTATCGTCGTGGTTGTGCTGCCATCACTGGATGTGCTCGATTCACCGATTAA

Protein sequence

METMKICLFLLLVFALVAPLSFAFHETSHGSSLVDDNSEYSFFGGGSSEAEAMTEDSRRQLFEYGFAYNREARKRFLTYYALSKNNIPCGRRGHSYYDCKKRRRINPYRRGCAAITGCARFTD

Homology

[Close]

BLAST of CmaCh11G017340 vs. Swiss-Prot
Match: RLF19_ARATH (Protein RALF-like 19 OS=Arabidopsis thaliana GN=RALFL19 PE=3 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 8.4e-15
Identity = 39/69 (56.52%), Postives = 48/69 (69.57%), Query Frame = 1


Query: 54  TEDSRRQLFEYGFAYNREARKRFLTYYALSKNNIPCGRRGHSYYDCKKRRRINPYRRGCA 113
           +E +RRQL          AR+ +++Y AL KNN+PC RRG SYYDCKKR+R NPYRRGC+
Sbjct: 50  SETNRRQL---------AARRSYISYGALRKNNVPCSRRGRSYYDCKKRKRANPYRRGCS 109

Query: 114 AITGCARFT 123
            IT C R T
Sbjct: 110 VITHCYRQT 109

[Close]

BLAST of CmaCh11G017340 vs. Swiss-Prot
Match: RLF4_ARATH (Protein RALF-like 4 OS=Arabidopsis thaliana GN=RALFL4 PE=3 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 7.1e-14
Identity = 50/125 (40.00%), Postives = 69/125 (55.20%), Query Frame = 1


Query: 1   METMKICLFLLLVFALVAPLSFAFHETS----HGSSLVDDNSEYSFFGGGSSEAEAMTED 60
           M    + +F LL+ A+VA    A +  +    +G   + ++ E         E+   +E 
Sbjct: 1   MGVKMLLIFGLLILAMVAKSVNATYPLTKSCINGQGCIGEDDEL--------ESLMDSET 60

Query: 61  SRRQLFEYGFAYNREARKRFLTYYALSKNNIPCGRRGHSYYDCKKRRRINPYRRGCAAIT 120
           +RRQL            +R++ Y AL KNN+PC RRG SYYDCKKRRR NPYRRGC+AIT
Sbjct: 61  NRRQLAR---------GRRYIGYDALKKNNVPCSRRGRSYYDCKKRRRNNPYRRGCSAIT 108

Query: 121 GCARF 122
            C R+
Sbjct: 121 HCYRY 108

[Close]

BLAST of CmaCh11G017340 vs. Swiss-Prot
Match: RLF23_ARATH (Rapid alkalinization factor 23 OS=Arabidopsis thaliana GN=RALF23 PE=1 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 7.3e-11
Identity = 37/81 (45.68%), Postives = 50/81 (61.73%), Query Frame = 1


Query: 42  FFGGGS--SEAEAMTEDSRRQLFEYGFAYNREARKRFLTYYALSKNNIPCGRRGHSYYDC 101
           F+GGG    E E  +E +RR L          A +R+++Y AL +N IPC RRG SYY+C
Sbjct: 67  FYGGGEMGEEFEMDSEINRRIL----------ATRRYISYGALRRNTIPCSRRGASYYNC 126

Query: 102 KKRRRINPYRRGCAAITGCAR 121
           ++  + NPY RGC+AIT C R
Sbjct: 127 RRGAQANPYSRGCSAITRCRR 137

[Close]

BLAST of CmaCh11G017340 vs. Swiss-Prot
Match: RALF_TOBAC (Rapid alkalinization factor OS=Nicotiana tabacum GN=RALF PE=1 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 3.6e-10
Identity = 37/79 (46.84%), Postives = 48/79 (60.76%), Query Frame = 1


Query: 44  GGG--SSEAEAMTEDSRRQLFEYGFAYNRE--ARKRFLTYYALSKNNIPCGRRGHSYYDC 103
           GGG   S  E + E+     FE     NR   A K++++Y AL KN++PC RRG SYY+C
Sbjct: 38  GGGCKGSIGECIAEEEE---FELDSESNRRILATKKYISYGALQKNSVPCSRRGASYYNC 97

Query: 104 KKRRRINPYRRGCAAITGC 119
           K   + NPY RGC+AIT C
Sbjct: 98  KPGAQANPYSRGCSAITRC 113

[Close]

BLAST of CmaCh11G017340 vs. Swiss-Prot
Match: RLF22_ARATH (Protein RALF-like 22 OS=Arabidopsis thaliana GN=RALFL22 PE=3 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 1.1e-09
Identity = 41/111 (36.94%), Postives = 63/111 (56.76%), Query Frame = 1


Query: 13  VFALVAPLSFAFHETSH-GSSL--VDDNSEYSFFGGGSSEAEAMTEDSRRQLFEYGFAYN 72
           V A++A +  A   T   G SL  V   S   F G   S AE + E+   + F+   +  
Sbjct: 10  VIAILAIVISAVESTGDFGDSLDFVRAGSSSLFSGCTGSIAECIAEEEEME-FDSDISRR 69

Query: 73  REARKRFLTYYALSKNNIPCGRRGHSYYDCKKRRRINPYRRGCAAITGCAR 121
             A+K++++Y A+ +N++PC RRG SYY+C++  + NPY RGC+ IT C R
Sbjct: 70  ILAQKKYISYGAMRRNSVPCSRRGASYYNCQRGAQANPYSRGCSTITRCRR 119

[Close]

BLAST of CmaCh11G017340 vs. TrEMBL
Match: A0A0A0KHU4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G484570 PE=4 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 5.8e-23
Identity = 65/123 (52.85%), Postives = 78/123 (63.41%), Query Frame = 1


Query: 1   METMKICLFLLLVFALVAPLSFAFHETSHGSSLVDDNSEYSFFGGGSSEAEAMTEDSRRQ 60
           M + K+CLFLLL+  + APL  A  +    S    D  +Y F            EDSRR 
Sbjct: 1   MRSTKLCLFLLLIAVVAAPLCLALSDDWTRSYA--DVPDYDFTNSN--------EDSRRL 60

Query: 61  LFEYGFAYNREARKRFLTYYALSKNNIPCGRRGHSYYDCKKRRRINPYRRGCAAITGCAR 120
           LF+YGFAY +  + ++L Y AL KNNIPC  RG SYYDCKKR++ NPYRRGC AITGCAR
Sbjct: 61  LFQYGFAY-KYPKNKYLGYDALRKNNIPCRHRGRSYYDCKKRKKANPYRRGCIAITGCAR 112

Query: 121 FTD 124
           FTD
Sbjct: 121 FTD 112

[Close]

BLAST of CmaCh11G017340 vs. TrEMBL
Match: A0A0A0KCD7_CUCSA (F3H9.8 protein OS=Cucumis sativus GN=Csa_6G199790 PE=4 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 4.2e-21
Identity = 62/123 (50.41%), Postives = 79/123 (64.23%), Query Frame = 1


Query: 4   MKICLFLLLVFALVA---PLSFAFHETSHGSSLVDDNSEYSFFGGGSSEAEAMTEDSRRQ 63
           MK+ L LLL+ A +A   P++      ++G      N +Y+F+G          +DSRR 
Sbjct: 1   MKLGLCLLLLVAAIAITLPVALCDWTRAYG------NPDYAFWGTAEPATINDVDDSRRL 60

Query: 64  LFEYGFAYNREARKRFLTYYALSKNNIPCGRRGHSYYDCKKRRRINPYRRGCAAITGCAR 123
           LF+YGFAY +  + ++L Y AL KNN PC  RGHSYYDC KRR+ NPYRRGC AITGCAR
Sbjct: 61  LFQYGFAY-KYPKNKYLGYDALRKNNSPCRHRGHSYYDCTKRRKANPYRRGCIAITGCAR 116

[Close]

BLAST of CmaCh11G017340 vs. TrEMBL
Match: R0HVQ3_9BRAS (Uncharacterized protein OS=Capsella rubella GN=CARUB_v10024364mg PE=4 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 1.4e-13
Identity = 43/80 (53.75%), Postives = 54/80 (67.50%), Query Frame = 1


Query: 45  GGSSEAEAM--TEDSRRQLFEYGFAYNREARKRFLTYYALSKNNIPCGRRGHSYYDCKKR 104
           G   E E++  +E +RRQL          AR+ +++Y AL KNN+PCGRRG SYYDCKKR
Sbjct: 39  GEDDELESLMDSEANRRQL---------AARRSYISYGALKKNNVPCGRRGRSYYDCKKR 98

Query: 105 RRINPYRRGCAAITGCARFT 123
           +R NPYRRGC+ IT C R T
Sbjct: 99  KRANPYRRGCSVITHCYRQT 109

[Close]

BLAST of CmaCh11G017340 vs. TrEMBL
Match: M4EMR1_BRARP (Uncharacterized protein OS=Brassica rapa subsp. pekinensis PE=4 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 3.2e-13
Identity = 43/81 (53.09%), Postives = 53/81 (65.43%), Query Frame = 1


Query: 45  GGSSEAEAM--TEDSRRQLFEYGFAYNREARKRFLTYYALSKNNIPCGRRGHSYYDCKKR 104
           G   E E++  +E +RRQL            +R++ Y AL KNN+PC RRG SYYDCKKR
Sbjct: 24  GDDDELESLMDSETNRRQLAR---------GRRYIGYDALKKNNVPCNRRGRSYYDCKKR 83

Query: 105 RRINPYRRGCAAITGCARFTD 124
           RR NPYRRGC+AIT C RF +
Sbjct: 84  RRNNPYRRGCSAITHCYRFLE 95

[Close]

BLAST of CmaCh11G017340 vs. TrEMBL
Match: A0A061GMB1_THECC (Ralf-like 4, putative OS=Theobroma cacao GN=TCM_029845 PE=4 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 3.2e-13
Identity = 48/115 (41.74%), Postives = 69/115 (60.00%), Query Frame = 1


Query: 8   LFLLLVFALVAPLSFAFHETSHGSSLVDDNSEYSFFGGGSSEAEAMTEDSRRQLFEYGFA 67
           +FLLL  A+VA  S  FHE S G +   ++   S   G     +   ED  + L +    
Sbjct: 8   VFLLLALAMVAE-STTFHEASWGLTHFGNDELSSCIDG-----QCDVEDVSQTLMDSEIN 67

Query: 68  YNREARKRFLTYYALSKNNIPCGRRGHSYYDCKKRRRINPYRRGCAAITGCARFT 123
             + A+KR+++Y AL  N++PC RRG+SYY+C+ R+R NPY RGC+AIT C R+T
Sbjct: 68  RRQLAQKRYISYGALKANSVPCNRRGNSYYNCQNRKRANPYNRGCSAITHCYRYT 116

[Close]

BLAST of CmaCh11G017340 vs. TAIR10
Match: AT2G33775.1 (AT2G33775.1 ralf-like 19)

HSP 1 Score: 81.3 bits (199), Expect = 4.7e-16
Identity = 39/69 (56.52%), Postives = 48/69 (69.57%), Query Frame = 1


Query: 54  TEDSRRQLFEYGFAYNREARKRFLTYYALSKNNIPCGRRGHSYYDCKKRRRINPYRRGCA 113
           +E +RRQL          AR+ +++Y AL KNN+PC RRG SYYDCKKR+R NPYRRGC+
Sbjct: 50  SETNRRQL---------AARRSYISYGALRKNNVPCSRRGRSYYDCKKRKRANPYRRGCS 109

Query: 114 AITGCARFT 123
            IT C R T
Sbjct: 110 VITHCYRQT 109

[Close]

BLAST of CmaCh11G017340 vs. TAIR10
Match: AT1G28270.1 (AT1G28270.1 ralf-like 4)

HSP 1 Score: 78.2 bits (191), Expect = 4.0e-15
Identity = 50/125 (40.00%), Postives = 69/125 (55.20%), Query Frame = 1


Query: 1   METMKICLFLLLVFALVAPLSFAFHETS----HGSSLVDDNSEYSFFGGGSSEAEAMTED 60
           M    + +F LL+ A+VA    A +  +    +G   + ++ E         E+   +E 
Sbjct: 1   MGVKMLLIFGLLILAMVAKSVNATYPLTKSCINGQGCIGEDDEL--------ESLMDSET 60

Query: 61  SRRQLFEYGFAYNREARKRFLTYYALSKNNIPCGRRGHSYYDCKKRRRINPYRRGCAAIT 120
           +RRQL            +R++ Y AL KNN+PC RRG SYYDCKKRRR NPYRRGC+AIT
Sbjct: 61  NRRQLAR---------GRRYIGYDALKKNNVPCSRRGRSYYDCKKRRRNNPYRRGCSAIT 108

Query: 121 GCARF 122
            C R+
Sbjct: 121 HCYRY 108

[Close]

BLAST of CmaCh11G017340 vs. TAIR10
Match: AT3G16570.1 (AT3G16570.1 rapid alkalinization factor 23)

HSP 1 Score: 68.2 bits (165), Expect = 4.1e-12
Identity = 37/81 (45.68%), Postives = 50/81 (61.73%), Query Frame = 1


Query: 42  FFGGGS--SEAEAMTEDSRRQLFEYGFAYNREARKRFLTYYALSKNNIPCGRRGHSYYDC 101
           F+GGG    E E  +E +RR L          A +R+++Y AL +N IPC RRG SYY+C
Sbjct: 67  FYGGGEMGEEFEMDSEINRRIL----------ATRRYISYGALRRNTIPCSRRGASYYNC 126

Query: 102 KKRRRINPYRRGCAAITGCAR 121
           ++  + NPY RGC+AIT C R
Sbjct: 127 RRGAQANPYSRGCSAITRCRR 137

[Close]

BLAST of CmaCh11G017340 vs. TAIR10
Match: AT3G05490.1 (AT3G05490.1 ralf-like 22)

HSP 1 Score: 64.3 bits (155), Expect = 6.0e-11
Identity = 41/111 (36.94%), Postives = 63/111 (56.76%), Query Frame = 1


Query: 13  VFALVAPLSFAFHETSH-GSSL--VDDNSEYSFFGGGSSEAEAMTEDSRRQLFEYGFAYN 72
           V A++A +  A   T   G SL  V   S   F G   S AE + E+   + F+   +  
Sbjct: 10  VIAILAIVISAVESTGDFGDSLDFVRAGSSSLFSGCTGSIAECIAEEEEME-FDSDISRR 69

Query: 73  REARKRFLTYYALSKNNIPCGRRGHSYYDCKKRRRINPYRRGCAAITGCAR 121
             A+K++++Y A+ +N++PC RRG SYY+C++  + NPY RGC+ IT C R
Sbjct: 70  ILAQKKYISYGAMRRNSVPCSRRGASYYNCQRGAQANPYSRGCSTITRCRR 119

[Close]

BLAST of CmaCh11G017340 vs. TAIR10
Match: AT4G15800.1 (AT4G15800.1 ralf-like 33)

HSP 1 Score: 62.8 bits (151), Expect = 1.7e-10
Identity = 29/61 (47.54%), Postives = 40/61 (65.57%), Query Frame = 1


Query: 62  FEYGFAYNRE--ARKRFLTYYALSKNNIPCGRRGHSYYDCKKRRRINPYRRGCAAITGCA 121
           FE     NR   A  ++++Y AL +N +PC RRG SYY+C++  + NPY RGC+AIT C 
Sbjct: 56  FEMDSEINRRILATTKYISYGALRRNTVPCSRRGASYYNCRRGAQANPYSRGCSAITRCR 115

[Close]

BLAST of CmaCh11G017340 vs. NCBI nr
Match: gi|449461879|ref|XP_004148669.1| (PREDICTED: protein RALF-like 19 [Cucumis sativus])

HSP 1 Score: 115.2 bits (287), Expect = 8.3e-23
Identity = 65/123 (52.85%), Postives = 78/123 (63.41%), Query Frame = 1


Query: 1   METMKICLFLLLVFALVAPLSFAFHETSHGSSLVDDNSEYSFFGGGSSEAEAMTEDSRRQ 60
           M + K+CLFLLL+  + APL  A  +    S    D  +Y F            EDSRR 
Sbjct: 1   MRSTKLCLFLLLIAVVAAPLCLALSDDWTRSYA--DVPDYDFTNSN--------EDSRRL 60

Query: 61  LFEYGFAYNREARKRFLTYYALSKNNIPCGRRGHSYYDCKKRRRINPYRRGCAAITGCAR 120
           LF+YGFAY +  + ++L Y AL KNNIPC  RG SYYDCKKR++ NPYRRGC AITGCAR
Sbjct: 61  LFQYGFAY-KYPKNKYLGYDALRKNNIPCRHRGRSYYDCKKRKKANPYRRGCIAITGCAR 112

Query: 121 FTD 124
           FTD
Sbjct: 121 FTD 112

[Close]

BLAST of CmaCh11G017340 vs. NCBI nr
Match: gi|659080853|ref|XP_008441015.1| (PREDICTED: protein RALF-like 19 [Cucumis melo])

HSP 1 Score: 111.3 bits (277), Expect = 1.2e-21
Identity = 62/124 (50.00%), Postives = 78/124 (62.90%), Query Frame = 1


Query: 1   METMKICLFLLLVFALVAPLSFAFHET-SHGSSLVDDNSEYSFFGGGSSEAEAMTEDSRR 60
           M +MK+ LFLL++  + APL  AF +  +H             +   + +     EDSRR
Sbjct: 1   MRSMKLGLFLLVIAVVAAPLCLAFSDDWTHA------------YAAPNYDFTTNNEDSRR 60

Query: 61  QLFEYGFAYNREARKRFLTYYALSKNNIPCGRRGHSYYDCKKRRRINPYRRGCAAITGCA 120
            LF+YGFAY +  + ++L Y AL KNN PC  RG SYYDCKKRR+ NPYRRGC AITGCA
Sbjct: 61  LLFQYGFAY-KYPKNKYLGYDALRKNNSPCRHRGRSYYDCKKRRKANPYRRGCIAITGCA 111

Query: 121 RFTD 124
           RFTD
Sbjct: 121 RFTD 111

[Close]

BLAST of CmaCh11G017340 vs. NCBI nr
Match: gi|449466199|ref|XP_004150814.1| (PREDICTED: protein RALF-like 4 [Cucumis sativus])

HSP 1 Score: 109.0 bits (271), Expect = 6.0e-21
Identity = 62/123 (50.41%), Postives = 79/123 (64.23%), Query Frame = 1


Query: 4   MKICLFLLLVFALVA---PLSFAFHETSHGSSLVDDNSEYSFFGGGSSEAEAMTEDSRRQ 63
           MK+ L LLL+ A +A   P++      ++G      N +Y+F+G          +DSRR 
Sbjct: 1   MKLGLCLLLLVAAIAITLPVALCDWTRAYG------NPDYAFWGTAEPATINDVDDSRRL 60

Query: 64  LFEYGFAYNREARKRFLTYYALSKNNIPCGRRGHSYYDCKKRRRINPYRRGCAAITGCAR 123
           LF+YGFAY +  + ++L Y AL KNN PC  RGHSYYDC KRR+ NPYRRGC AITGCAR
Sbjct: 61  LFQYGFAY-KYPKNKYLGYDALRKNNSPCRHRGHSYYDCTKRRKANPYRRGCIAITGCAR 116

[Close]

BLAST of CmaCh11G017340 vs. NCBI nr
Match: gi|1009109354|ref|XP_015889777.1| (PREDICTED: protein RALF-like 19 [Ziziphus jujuba])

HSP 1 Score: 92.4 bits (228), Expect = 5.8e-16
Identity = 56/121 (46.28%), Postives = 74/121 (61.16%), Query Frame = 1


Query: 4   MKICL-FLLLVFALVAPLSFAFHETSHGSSLVDDNSEYSFFGGGSSEAEAMTEDSRRQLF 63
           +K+CL FLLL  A+VA  S +FH+ S G   +   S   F G   +E    +E SRR L 
Sbjct: 3   VKLCLIFLLLALAVVAEAS-SFHDASWGLDHLSHGSVGDFIGE-DNEMLMDSEASRRAL- 62

Query: 64  EYGFAYNREARKRFLTYYALSKNNIPCGRRGHSYYDCKKRRRINPYRRGCAAITGCARFT 123
                      +++++Y AL KN +PCGRRG SYY+C+KR+R NPY+RGC  IT CARFT
Sbjct: 63  --------AGGRKYISYSALKKNRVPCGRRGQSYYNCQKRQRANPYKRGCTVITHCARFT 112

[Close]

BLAST of CmaCh11G017340 vs. NCBI nr
Match: gi|695043794|ref|XP_009409606.1| (PREDICTED: protein RALF-like 22 [Musa acuminata subsp. malaccensis])

HSP 1 Score: 84.3 bits (207), Expect = 1.6e-13
Identity = 38/75 (50.67%), Postives = 51/75 (68.00%), Query Frame = 1


Query: 49  EAEAMTEDSRRQLFEYGFAYNREARKRFLTYYALSKNNIPCGRRGHSYYDCKKRRRINPY 108
           E +   ED+RR      F Y    R+RF++Y ALS++ +PC RRGHSYY+C++  R NPY
Sbjct: 65  EPDMEPEDARR------FLYRANGRQRFISYGALSRDRVPCNRRGHSYYNCRRSGRANPY 124

Query: 109 RRGCAAITGCARFTD 124
           RRGC+ IT CAR+ D
Sbjct: 125 RRGCSVITRCARYLD 133

The following BLAST results are available for this feature:

BLAST of CmaCh11G017340 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RLF19_ARATH	8.4e-15	56.52	Protein RALF-like 19 OS=Arabidopsis thaliana GN=RALFL19 PE=3 SV=1	[more]
RLF4_ARATH	7.1e-14	40.00	Protein RALF-like 4 OS=Arabidopsis thaliana GN=RALFL4 PE=3 SV=1	[more]
RLF23_ARATH	7.3e-11	45.68	Rapid alkalinization factor 23 OS=Arabidopsis thaliana GN=RALF23 PE=1 SV=1	[more]
RALF_TOBAC	3.6e-10	46.84	Rapid alkalinization factor OS=Nicotiana tabacum GN=RALF PE=1 SV=1	[more]
RLF22_ARATH	1.1e-09	36.94	Protein RALF-like 22 OS=Arabidopsis thaliana GN=RALFL22 PE=3 SV=1	[more]

BLAST of CmaCh11G017340 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KHU4_CUCSA	5.8e-23	52.85	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G484570 PE=4 SV=1	[more]
A0A0A0KCD7_CUCSA	4.2e-21	50.41	F3H9.8 protein OS=Cucumis sativus GN=Csa_6G199790 PE=4 SV=1	[more]
R0HVQ3_9BRAS	1.4e-13	53.75	Uncharacterized protein OS=Capsella rubella GN=CARUB_v10024364mg PE=4 SV=1	[more]
M4EMR1_BRARP	3.2e-13	53.09	Uncharacterized protein OS=Brassica rapa subsp. pekinensis PE=4 SV=1	[more]
A0A061GMB1_THECC	3.2e-13	41.74	Ralf-like 4, putative OS=Theobroma cacao GN=TCM_029845 PE=4 SV=1	[more]

BLAST of CmaCh11G017340 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G33775.1	4.7e-16	56.52	ralf-like 19	[more]
AT1G28270.1	4.0e-15	40.00	ralf-like 4	[more]
AT3G16570.1	4.1e-12	45.68	rapid alkalinization factor 23	[more]
AT3G05490.1	6.0e-11	36.94	ralf-like 22	[more]
AT4G15800.1	1.7e-10	47.54	ralf-like 33	[more]

BLAST of CmaCh11G017340 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449461879\|ref\|XP_004148669.1\|	8.3e-23	52.85	PREDICTED: protein RALF-like 19 [Cucumis sativus]	[more]
gi\|659080853\|ref\|XP_008441015.1\|	1.2e-21	50.00	PREDICTED: protein RALF-like 19 [Cucumis melo]	[more]
gi\|449466199\|ref\|XP_004150814.1\|	6.0e-21	50.41	PREDICTED: protein RALF-like 4 [Cucumis sativus]	[more]
gi\|1009109354\|ref\|XP_015889777.1\|	5.8e-16	46.28	PREDICTED: protein RALF-like 19 [Ziziphus jujuba]	[more]
gi\|695043794\|ref\|XP_009409606.1\|	1.6e-13	50.67	PREDICTED: protein RALF-like 22 [Musa acuminata subsp. malaccensis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR008801	RALF

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh11G017340.1	CmaCh11G017340.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008801	Rapid ALkalinization Factor	PFAM	PF05498	RALF	coord: 58..120 score: 9.2
None	No IPR available	PANTHER	PTHR33136	FAMILY NOT NAMED	coord: 6..122 score: 2.1

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh11G017340	Cucumber (Chinese Long) v3	cmacucB0128
CmaCh11G017340	Cucumber (Chinese Long) v3	cmacucB0145
CmaCh11G017340	Cucumber (Chinese Long) v3	cmacucB0153
CmaCh11G017340	Cucumber (Chinese Long) v3	cmacucB0166
CmaCh11G017340	Cucumber (Chinese Long) v3	cmacucB0171
CmaCh11G017340	Watermelon (97103) v2	cmawmbB091
CmaCh11G017340	Watermelon (97103) v2	cmawmbB104
CmaCh11G017340	Watermelon (97103) v2	cmawmbB129
CmaCh11G017340	Watermelon (97103) v2	cmawmbB148
CmaCh11G017340	Wax gourd	cmawgoB0112
CmaCh11G017340	Wax gourd	cmawgoB0116
CmaCh11G017340	Wax gourd	cmawgoB0122
CmaCh11G017340	Wax gourd	cmawgoB0129
CmaCh11G017340	Cucurbita maxima (Rimu)	cmacmaB135
CmaCh11G017340	Cucurbita maxima (Rimu)	cmacmaB149
CmaCh11G017340	Cucurbita maxima (Rimu)	cmacmaB163
CmaCh11G017340	Cucurbita maxima (Rimu)	cmacmaB167
CmaCh11G017340	Cucurbita maxima (Rimu)	cmacmaB171
CmaCh11G017340	Cucumber (Gy14) v1	cgycmaB0221
CmaCh11G017340	Cucumber (Gy14) v1	cgycmaB0620
CmaCh11G017340	Cucumber (Gy14) v1	cgycmaB0684
CmaCh11G017340	Cucurbita moschata (Rifu)	cmacmoB117
CmaCh11G017340	Cucurbita moschata (Rifu)	cmacmoB133
CmaCh11G017340	Cucurbita moschata (Rifu)	cmacmoB143
CmaCh11G017340	Cucurbita moschata (Rifu)	cmacmoB161
CmaCh11G017340	Cucurbita moschata (Rifu)	cmacmoB156
CmaCh11G017340	Wild cucumber (PI 183967)	cmacpiB125
CmaCh11G017340	Wild cucumber (PI 183967)	cmacpiB141
CmaCh11G017340	Wild cucumber (PI 183967)	cmacpiB143
CmaCh11G017340	Cucumber (Chinese Long) v2	cmacuB128
CmaCh11G017340	Cucumber (Chinese Long) v2	cmacuB144
CmaCh11G017340	Cucumber (Chinese Long) v2	cmacuB146
CmaCh11G017340	Melon (DHL92) v3.5.1	cmameB098
CmaCh11G017340	Melon (DHL92) v3.5.1	cmameB140
CmaCh11G017340	Melon (DHL92) v3.5.1	cmameB144
CmaCh11G017340	Watermelon (Charleston Gray)	cmawcgB096
CmaCh11G017340	Watermelon (Charleston Gray)	cmawcgB101
CmaCh11G017340	Watermelon (Charleston Gray)	cmawcgB125
CmaCh11G017340	Watermelon (Charleston Gray)	cmawcgB126
CmaCh11G017340	Watermelon (Charleston Gray)	cmawcgB140
CmaCh11G017340	Watermelon (97103) v1	cmawmB114
CmaCh11G017340	Watermelon (97103) v1	cmawmB117
CmaCh11G017340	Watermelon (97103) v1	cmawmB127
CmaCh11G017340	Cucurbita pepo (Zucchini)	cmacpeB108
CmaCh11G017340	Cucurbita pepo (Zucchini)	cmacpeB114
CmaCh11G017340	Cucurbita pepo (Zucchini)	cmacpeB116
CmaCh11G017340	Cucurbita pepo (Zucchini)	cmacpeB136
CmaCh11G017340	Cucurbita pepo (Zucchini)	cmacpeB138
CmaCh11G017340	Cucurbita pepo (Zucchini)	cmacpeB154
CmaCh11G017340	Bottle gourd (USVL1VR-Ls)	cmalsiB105
CmaCh11G017340	Bottle gourd (USVL1VR-Ls)	cmalsiB116
CmaCh11G017340	Bottle gourd (USVL1VR-Ls)	cmalsiB127
CmaCh11G017340	Bottle gourd (USVL1VR-Ls)	cmalsiB153
CmaCh11G017340	Cucumber (Gy14) v2	cgybcmaB158
CmaCh11G017340	Cucumber (Gy14) v2	cgybcmaB295
CmaCh11G017340	Cucumber (Gy14) v2	cgybcmaB895
CmaCh11G017340	Melon (DHL92) v3.6.1	cmamedB106
CmaCh11G017340	Melon (DHL92) v3.6.1	cmamedB135
CmaCh11G017340	Melon (DHL92) v3.6.1	cmamedB151
CmaCh11G017340	Melon (DHL92) v3.6.1	cmamedB152
CmaCh11G017340	Melon (DHL92) v3.6.1	cmamedB157
CmaCh11G017340	Silver-seed gourd	carcmaB0248
CmaCh11G017340	Silver-seed gourd	carcmaB0405
CmaCh11G017340	Silver-seed gourd	carcmaB0525
CmaCh11G017340	Silver-seed gourd	carcmaB1113
CmaCh11G017340	Silver-seed gourd	carcmaB1115