CmaCh11G012110.1 (mRNA) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: exonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGACTTCCCTCCCTTCCGGTTCAGTAGCACAGCGAACATCCTTTCATTTATTGGAGAGGTTCCAGAGTAAACTCTAATTCATCTTTCCTTCCTGTTCTTTCATGTCTTTCCTTCTAGAGTTCAGTCTCTTTCCTGTCCCTGAATTTATTCAACCACTGTAAAGGAGAGAGGAGAGAATCTTTCGTTTAGTCTTCAGTCTCATTCTTCTTTCATTTTCTTCTTCTTTTCTTTACTATCCCTTGTTGTTGTGAGAATTCTTAATTCATGAAAAACAGAGACTAAAGCAAGTGTTGGATTCAAAGCTGGTGTTAAAGATTCTAAATTGACTTATTATACTCCTTCATATGAAACCAAAGATACTGATATCTTGGCAGCATTACGAGTAACTCCTCAATCGGGAGTTCCACCCGAGGAAGTAGGGGCTGCTGTAGCTGCTGCTGAATCTTCTACTAGTACATGGACAACTGTGTGGACCGATGAGCTTACCAGTCTTGATCGTTACGTTACAAAGGACGATGTTATGGATGTTCCCGCTGGAGAAGAAAATCAATATATTGCTTATCTAGCTGCTTATCCCCTAGACCCTTTTGAAGAAGGTTCTGTTACTAACTGA ATGACTTCCCTCCCTTCCGGTTCAGTAGCACAGCGAACATCCTTTCATTTATTGGAGAGGTTCCAGAAGACTAAAGCAAGTGTTGGATTCAAAGCTGGTGTTAAAGATTCTAAATTGACTTATTATACTCCTTCATATGAAACCAAAGATACTGATATCTTGGCAGCATTACGAGTAACTCCTCAATCGGGAGTTCCACCCGAGGAAGTAGGGGCTGCTGTAGCTGCTGCTGAATCTTCTACTAGTACATGGACAACTGTGTGGACCGATGAGCTTACCAGTCTTGATCGTTACGTTACAAAGGACGATGTTATGGATGTTCCCGCTGGAGAAGAAAATCAATATATTGCTTATCTAGCTGCTTATCCCCTAGACCCTTTTGAAGAAGGTTCTGTTACTAACTGA ATGACTTCCCTCCCTTCCGGTTCAGTAGCACAGCGAACATCCTTTCATTTATTGGAGAGGTTCCAGAAGACTAAAGCAAGTGTTGGATTCAAAGCTGGTGTTAAAGATTCTAAATTGACTTATTATACTCCTTCATATGAAACCAAAGATACTGATATCTTGGCAGCATTACGAGTAACTCCTCAATCGGGAGTTCCACCCGAGGAAGTAGGGGCTGCTGTAGCTGCTGCTGAATCTTCTACTAGTACATGGACAACTGTGTGGACCGATGAGCTTACCAGTCTTGATCGTTACGTTACAAAGGACGATGTTATGGATGTTCCCGCTGGAGAAGAAAATCAATATATTGCTTATCTAGCTGCTTATCCCCTAGACCCTTTTGAAGAAGGTTCTGTTACTAACTGA MTSLPSGSVAQRTSFHLLERFQKTKASVGFKAGVKDSKLTYYTPSYETKDTDILAALRVTPQSGVPPEEVGAAVAAAESSTSTWTTVWTDELTSLDRYVTKDDVMDVPAGEENQYIAYLAAYPLDPFEEGSVTN
BLAST of CmaCh11G012110.1 vs. Swiss-Prot
Match: RBL_PHAAO (Ribulose bisphosphate carboxylase large chain OS=Phalaenopsis aphrodite subsp. formosana GN=rbcL PE=3 SV=2) HSP 1 Score: 167.2 bits (422), Expect = 1.3e-40 Identity = 90/112 (80.36%), Postives = 95/112 (84.82%), Query Frame = 1
BLAST of CmaCh11G012110.1 vs. Swiss-Prot
Match: RBL_SALPL (Ribulose bisphosphate carboxylase large chain (Fragment) OS=Salacia pallescens GN=rbcL PE=3 SV=2) HSP 1 Score: 166.8 bits (421), Expect = 1.6e-40 Identity = 90/112 (80.36%), Postives = 95/112 (84.82%), Query Frame = 1
BLAST of CmaCh11G012110.1 vs. Swiss-Prot
Match: RBL_SOYBN (Ribulose bisphosphate carboxylase large chain OS=Glycine max GN=rbcL PE=1 SV=3) HSP 1 Score: 166.8 bits (421), Expect = 1.6e-40 Identity = 90/112 (80.36%), Postives = 95/112 (84.82%), Query Frame = 1
BLAST of CmaCh11G012110.1 vs. Swiss-Prot
Match: RBL_PLAOC (Ribulose bisphosphate carboxylase large chain OS=Platanus occidentalis GN=rbcL PE=3 SV=2) HSP 1 Score: 166.4 bits (420), Expect = 2.2e-40 Identity = 90/112 (80.36%), Postives = 95/112 (84.82%), Query Frame = 1
BLAST of CmaCh11G012110.1 vs. Swiss-Prot
Match: RBL_CUCSA (Ribulose bisphosphate carboxylase large chain OS=Cucumis sativus GN=rbcL PE=1 SV=5) HSP 1 Score: 166.4 bits (420), Expect = 2.2e-40 Identity = 90/112 (80.36%), Postives = 95/112 (84.82%), Query Frame = 1
BLAST of CmaCh11G012110.1 vs. TrEMBL
Match: U5YGB2_9ROSA (Ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (Fragment) OS=Pouzolzia mixta GN=rbcL PE=4 SV=1) HSP 1 Score: 167.9 bits (424), Expect = 8.2e-39 Identity = 92/112 (82.14%), Postives = 95/112 (84.82%), Query Frame = 1
BLAST of CmaCh11G012110.1 vs. TrEMBL
Match: A0A0U1X6R2_9ROSI (Ribulose bisphosphate carboxylase large chain (Fragment) OS=Erythroxylum deciduum GN=rbcL PE=3 SV=1) HSP 1 Score: 167.9 bits (424), Expect = 8.2e-39 Identity = 91/112 (81.25%), Postives = 95/112 (84.82%), Query Frame = 1
BLAST of CmaCh11G012110.1 vs. TrEMBL
Match: G8FKU4_9ASPA (Ribulose bisphosphate carboxylase large chain (Fragment) OS=Porpax reticulata GN=rbcL PE=3 SV=1) HSP 1 Score: 167.9 bits (424), Expect = 8.2e-39 Identity = 90/112 (80.36%), Postives = 97/112 (86.61%), Query Frame = 1
BLAST of CmaCh11G012110.1 vs. TrEMBL
Match: G8FKU2_9ASPA (Ribulose bisphosphate carboxylase large chain (Fragment) OS=Porpax reticulata GN=rbcL PE=3 SV=1) HSP 1 Score: 167.9 bits (424), Expect = 8.2e-39 Identity = 90/112 (80.36%), Postives = 97/112 (86.61%), Query Frame = 1
BLAST of CmaCh11G012110.1 vs. TrEMBL
Match: E0D929_9ASTE (Ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (Fragment) OS=Alangium sp. SH-2010 PE=3 SV=1) HSP 1 Score: 167.9 bits (424), Expect = 8.2e-39 Identity = 91/112 (81.25%), Postives = 96/112 (85.71%), Query Frame = 1
BLAST of CmaCh11G012110.1 vs. TAIR10
Match: ATCG00490.1 (ATCG00490.1 ribulose-bisphosphate carboxylases) HSP 1 Score: 159.1 bits (401), Expect = 1.9e-39 Identity = 86/112 (76.79%), Postives = 93/112 (83.04%), Query Frame = 1
BLAST of CmaCh11G012110.1 vs. NCBI nr
Match: gi|676232431|gb|AIM18275.1| (ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit, partial (chloroplast) [Erythroxylum deciduum]) HSP 1 Score: 167.9 bits (424), Expect = 1.2e-38 Identity = 91/112 (81.25%), Postives = 95/112 (84.82%), Query Frame = 1
BLAST of CmaCh11G012110.1 vs. NCBI nr
Match: gi|306481307|dbj|BAJ16758.1| (ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit [Alangium sp. SH-2010]) HSP 1 Score: 167.9 bits (424), Expect = 1.2e-38 Identity = 91/112 (81.25%), Postives = 96/112 (85.71%), Query Frame = 1
BLAST of CmaCh11G012110.1 vs. NCBI nr
Match: gi|557163219|gb|AGZ90842.1| (ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit, partial (chloroplast) [Pouzolzia mixta]) HSP 1 Score: 167.9 bits (424), Expect = 1.2e-38 Identity = 92/112 (82.14%), Postives = 95/112 (84.82%), Query Frame = 1
BLAST of CmaCh11G012110.1 vs. NCBI nr
Match: gi|353444763|gb|AER00145.1| (ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit, partial (chloroplast) [Porpax reticulata]) HSP 1 Score: 167.9 bits (424), Expect = 1.2e-38 Identity = 90/112 (80.36%), Postives = 97/112 (86.61%), Query Frame = 1
BLAST of CmaCh11G012110.1 vs. NCBI nr
Match: gi|353444751|gb|AER00139.1| (ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit, partial (chloroplast) [Porpax reticulata]) HSP 1 Score: 167.9 bits (424), Expect = 1.2e-38 Identity = 90/112 (80.36%), Postives = 97/112 (86.61%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
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