CmaCh11G012110 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh11G012110
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionRibulose bisphosphate carboxylase large chain
LocationCma_Chr11 : 7391876 .. 7392489 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACTTCCCTCCCTTCCGGTTCAGTAGCACAGCGAACATCCTTTCATTTATTGGAGAGGTTCCAGAGTAAACTCTAATTCATCTTTCCTTCCTGTTCTTTCATGTCTTTCCTTCTAGAGTTCAGTCTCTTTCCTGTCCCTGAATTTATTCAACCACTGTAAAGGAGAGAGGAGAGAATCTTTCGTTTAGTCTTCAGTCTCATTCTTCTTTCATTTTCTTCTTCTTTTCTTTACTATCCCTTGTTGTTGTGAGAATTCTTAATTCATGAAAAACAGAGACTAAAGCAAGTGTTGGATTCAAAGCTGGTGTTAAAGATTCTAAATTGACTTATTATACTCCTTCATATGAAACCAAAGATACTGATATCTTGGCAGCATTACGAGTAACTCCTCAATCGGGAGTTCCACCCGAGGAAGTAGGGGCTGCTGTAGCTGCTGCTGAATCTTCTACTAGTACATGGACAACTGTGTGGACCGATGAGCTTACCAGTCTTGATCGTTACGTTACAAAGGACGATGTTATGGATGTTCCCGCTGGAGAAGAAAATCAATATATTGCTTATCTAGCTGCTTATCCCCTAGACCCTTTTGAAGAAGGTTCTGTTACTAACTGA

mRNA sequence

ATGACTTCCCTCCCTTCCGGTTCAGTAGCACAGCGAACATCCTTTCATTTATTGGAGAGGTTCCAGAAGACTAAAGCAAGTGTTGGATTCAAAGCTGGTGTTAAAGATTCTAAATTGACTTATTATACTCCTTCATATGAAACCAAAGATACTGATATCTTGGCAGCATTACGAGTAACTCCTCAATCGGGAGTTCCACCCGAGGAAGTAGGGGCTGCTGTAGCTGCTGCTGAATCTTCTACTAGTACATGGACAACTGTGTGGACCGATGAGCTTACCAGTCTTGATCGTTACGTTACAAAGGACGATGTTATGGATGTTCCCGCTGGAGAAGAAAATCAATATATTGCTTATCTAGCTGCTTATCCCCTAGACCCTTTTGAAGAAGGTTCTGTTACTAACTGA

Coding sequence (CDS)

ATGACTTCCCTCCCTTCCGGTTCAGTAGCACAGCGAACATCCTTTCATTTATTGGAGAGGTTCCAGAAGACTAAAGCAAGTGTTGGATTCAAAGCTGGTGTTAAAGATTCTAAATTGACTTATTATACTCCTTCATATGAAACCAAAGATACTGATATCTTGGCAGCATTACGAGTAACTCCTCAATCGGGAGTTCCACCCGAGGAAGTAGGGGCTGCTGTAGCTGCTGCTGAATCTTCTACTAGTACATGGACAACTGTGTGGACCGATGAGCTTACCAGTCTTGATCGTTACGTTACAAAGGACGATGTTATGGATGTTCCCGCTGGAGAAGAAAATCAATATATTGCTTATCTAGCTGCTTATCCCCTAGACCCTTTTGAAGAAGGTTCTGTTACTAACTGA

Protein sequence

MTSLPSGSVAQRTSFHLLERFQKTKASVGFKAGVKDSKLTYYTPSYETKDTDILAALRVTPQSGVPPEEVGAAVAAAESSTSTWTTVWTDELTSLDRYVTKDDVMDVPAGEENQYIAYLAAYPLDPFEEGSVTN
Homology
[Close]
BLAST of CmaCh11G012110 vs. Swiss-Prot
Match: RBL_PHAAO (Ribulose bisphosphate carboxylase large chain OS=Phalaenopsis aphrodite subsp. formosana GN=rbcL PE=3 SV=2)

HSP 1 Score: 167.2 bits (422), Expect = 1.3e-40
Identity = 90/112 (80.36%), Postives = 95/112 (84.82%), Query Frame = 1 

Query: 23  KTKASVGFKAGVKDSKLTYYTPSYETKDTDILAALRVTPQSGVPPEEVGAAVAAAESSTS 82
           +TKASVGFKAGVKD KLTYYTP YETKDTDILAA RVTPQ GVPPEE GAAV AAESST 
Sbjct: 6   ETKASVGFKAGVKDYKLTYYTPDYETKDTDILAAFRVTPQPGVPPEEAGAAV-AAESSTG 65

Query: 83  TWTTVWTDELTSLDRYVTKDDVMDVPAGEENQYIAYLAAYPLDPFEEGSVTN 135
           TWTTVWTD LTSLDRY  +   ++V  GEENQYIAY+ AYPLD FEEGSVTN
Sbjct: 66  TWTTVWTDGLTSLDRYKGRCYHIEVVVGEENQYIAYV-AYPLDLFEEGSVTN 115

[Close]
BLAST of CmaCh11G012110 vs. Swiss-Prot
Match: RBL_SALPL (Ribulose bisphosphate carboxylase large chain (Fragment) OS=Salacia pallescens GN=rbcL PE=3 SV=2)

HSP 1 Score: 166.8 bits (421), Expect = 1.6e-40
Identity = 90/112 (80.36%), Postives = 95/112 (84.82%), Query Frame = 1 

Query: 23  KTKASVGFKAGVKDSKLTYYTPSYETKDTDILAALRVTPQSGVPPEEVGAAVAAAESSTS 82
           +TKASVGFKAGVKD KLTYYTP YETKDTDILAA RVTPQ GVPPEE GAAV AAESST 
Sbjct: 6   ETKASVGFKAGVKDYKLTYYTPDYETKDTDILAAFRVTPQPGVPPEEAGAAV-AAESSTG 65

Query: 83  TWTTVWTDELTSLDRYVTKDDVMDVPAGEENQYIAYLAAYPLDPFEEGSVTN 135
           TWTTVWTD LTSLDRY  +   ++  AGEENQYIAY+ AYPLD FEEGSVTN
Sbjct: 66  TWTTVWTDGLTSLDRYKGRCYGLEPVAGEENQYIAYV-AYPLDLFEEGSVTN 115

[Close]
BLAST of CmaCh11G012110 vs. Swiss-Prot
Match: RBL_SOYBN (Ribulose bisphosphate carboxylase large chain OS=Glycine max GN=rbcL PE=1 SV=3)

HSP 1 Score: 166.8 bits (421), Expect = 1.6e-40
Identity = 90/112 (80.36%), Postives = 95/112 (84.82%), Query Frame = 1 

Query: 23  KTKASVGFKAGVKDSKLTYYTPSYETKDTDILAALRVTPQSGVPPEEVGAAVAAAESSTS 82
           +TKASVGFKAGVKD KLTYYTP YETKDTDILAA RVTPQ GVPPEE GAAV AAESST 
Sbjct: 6   ETKASVGFKAGVKDYKLTYYTPDYETKDTDILAAFRVTPQPGVPPEEAGAAV-AAESSTG 65

Query: 83  TWTTVWTDELTSLDRYVTKDDVMDVPAGEENQYIAYLAAYPLDPFEEGSVTN 135
           TWTTVWTD LTSLDRY  +   ++  AGEENQYIAY+ AYPLD FEEGSVTN
Sbjct: 66  TWTTVWTDGLTSLDRYKGRCYGLEPVAGEENQYIAYV-AYPLDLFEEGSVTN 115

[Close]
BLAST of CmaCh11G012110 vs. Swiss-Prot
Match: RBL_PLAOC (Ribulose bisphosphate carboxylase large chain OS=Platanus occidentalis GN=rbcL PE=3 SV=2)

HSP 1 Score: 166.4 bits (420), Expect = 2.2e-40
Identity = 90/112 (80.36%), Postives = 95/112 (84.82%), Query Frame = 1 

Query: 23  KTKASVGFKAGVKDSKLTYYTPSYETKDTDILAALRVTPQSGVPPEEVGAAVAAAESSTS 82
           +TKASVGFKAGVKD KLTYYTP YETKDTDILAA RVTPQ GVPPEE GAAV AAESST 
Sbjct: 6   ETKASVGFKAGVKDYKLTYYTPDYETKDTDILAAFRVTPQPGVPPEEAGAAV-AAESSTG 65

Query: 83  TWTTVWTDELTSLDRYVTKDDVMDVPAGEENQYIAYLAAYPLDPFEEGSVTN 135
           TWTTVWTD LTSLDRY  +   ++  AGEENQYIAY+ AYPLD FEEGSVTN
Sbjct: 66  TWTTVWTDGLTSLDRYKGRCYHIEPVAGEENQYIAYV-AYPLDLFEEGSVTN 115

[Close]
BLAST of CmaCh11G012110 vs. Swiss-Prot
Match: RBL_CUCSA (Ribulose bisphosphate carboxylase large chain OS=Cucumis sativus GN=rbcL PE=1 SV=5)

HSP 1 Score: 166.4 bits (420), Expect = 2.2e-40
Identity = 90/112 (80.36%), Postives = 95/112 (84.82%), Query Frame = 1 

Query: 23  KTKASVGFKAGVKDSKLTYYTPSYETKDTDILAALRVTPQSGVPPEEVGAAVAAAESSTS 82
           +TKASVGFKAGVKD KLTYYTP YETKDTDILAA RVTPQ GVPPEE GAAV AAESST 
Sbjct: 6   ETKASVGFKAGVKDYKLTYYTPEYETKDTDILAAFRVTPQPGVPPEEAGAAV-AAESSTG 65

Query: 83  TWTTVWTDELTSLDRYVTKDDVMDVPAGEENQYIAYLAAYPLDPFEEGSVTN 135
           TWTTVWTD LTSLDRY  +   ++  AGEENQYIAY+ AYPLD FEEGSVTN
Sbjct: 66  TWTTVWTDGLTSLDRYKGRCYGIEPVAGEENQYIAYV-AYPLDLFEEGSVTN 115

[Close]
BLAST of CmaCh11G012110 vs. TrEMBL
Match: U5YGB2_9ROSA (Ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (Fragment) OS=Pouzolzia mixta GN=rbcL PE=4 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 8.2e-39
Identity = 92/112 (82.14%), Postives = 95/112 (84.82%), Query Frame = 1 

Query: 23  KTKASVGFKAGVKDSKLTYYTPSYETKDTDILAALRVTPQSGVPPEEVGAAVAAAESSTS 82
           +TKASVGFKAGVKD KLTYYTP YETKDTDILAA RVTPQ GVPPEE GAAV AAESST 
Sbjct: 6   ETKASVGFKAGVKDYKLTYYTPEYETKDTDILAAFRVTPQPGVPPEEAGAAV-AAESSTG 65

Query: 83  TWTTVWTDELTSLDRYVTKDDVMDVPAGEENQYIAYLAAYPLDPFEEGSVTN 135
           TWTTVWTD LTSLDRY    D+  V AGEENQYIAY+ AYPLD FEEGSVTN
Sbjct: 66  TWTTVWTDGLTSLDRYAGTCDIEPV-AGEENQYIAYV-AYPLDLFEEGSVTN 114

[Close]
BLAST of CmaCh11G012110 vs. TrEMBL
Match: A0A0U1X6R2_9ROSI (Ribulose bisphosphate carboxylase large chain (Fragment) OS=Erythroxylum deciduum GN=rbcL PE=3 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 8.2e-39
Identity = 91/112 (81.25%), Postives = 95/112 (84.82%), Query Frame = 1 

Query: 23  KTKASVGFKAGVKDSKLTYYTPSYETKDTDILAALRVTPQSGVPPEEVGAAVAAAESSTS 82
           KTKASVGFKAGVKD KLTYYTP YETKDTDILAA RVTPQ GVPPEE GAAV AAESST 
Sbjct: 1   KTKASVGFKAGVKDYKLTYYTPDYETKDTDILAAFRVTPQPGVPPEEAGAAV-AAESSTG 60

Query: 83  TWTTVWTDELTSLDRYVTKDDVMDVPAGEENQYIAYLAAYPLDPFEEGSVTN 135
           TWTTVWTD LTSLDRY  +   ++  AGEENQYIAY+ AYPLD FEEGSVTN
Sbjct: 61  TWTTVWTDGLTSLDRYKGRCYHIEPVAGEENQYIAYV-AYPLDLFEEGSVTN 110

[Close]
BLAST of CmaCh11G012110 vs. TrEMBL
Match: G8FKU4_9ASPA (Ribulose bisphosphate carboxylase large chain (Fragment) OS=Porpax reticulata GN=rbcL PE=3 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 8.2e-39
Identity = 90/112 (80.36%), Postives = 97/112 (86.61%), Query Frame = 1 

Query: 23  KTKASVGFKAGVKDSKLTYYTPSYETKDTDILAALRVTPQSGVPPEEVGAAVAAAESSTS 82
           +TKASVGFKAGVKD KLTYYTP+YETKDTDILAA RVTPQ GVPPEE GAAV AAESST 
Sbjct: 2   ETKASVGFKAGVKDYKLTYYTPNYETKDTDILAAFRVTPQPGVPPEEAGAAV-AAESSTG 61

Query: 83  TWTTVWTDELTSLDRYVTKDDVMDVPAGEENQYIAYLAAYPLDPFEEGSVTN 135
           TWTTVWTD LTSLDRY  +   ++V +GEENQYIAY+ AYPLD FEEGSVTN
Sbjct: 62  TWTTVWTDGLTSLDRYKGRCYHIEVVSGEENQYIAYV-AYPLDLFEEGSVTN 111

[Close]
BLAST of CmaCh11G012110 vs. TrEMBL
Match: G8FKU2_9ASPA (Ribulose bisphosphate carboxylase large chain (Fragment) OS=Porpax reticulata GN=rbcL PE=3 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 8.2e-39
Identity = 90/112 (80.36%), Postives = 97/112 (86.61%), Query Frame = 1 

Query: 23  KTKASVGFKAGVKDSKLTYYTPSYETKDTDILAALRVTPQSGVPPEEVGAAVAAAESSTS 82
           +TKASVGFKAGVKD KLTYYTP+YETKDTDILAA RVTPQ GVPPEE GAAV AAESST 
Sbjct: 2   ETKASVGFKAGVKDYKLTYYTPNYETKDTDILAAFRVTPQPGVPPEEAGAAV-AAESSTG 61

Query: 83  TWTTVWTDELTSLDRYVTKDDVMDVPAGEENQYIAYLAAYPLDPFEEGSVTN 135
           TWTTVWTD LTSLDRY  +   ++V +GEENQYIAY+ AYPLD FEEGSVTN
Sbjct: 62  TWTTVWTDGLTSLDRYKGRCYHIEVVSGEENQYIAYV-AYPLDLFEEGSVTN 111

[Close]
BLAST of CmaCh11G012110 vs. TrEMBL
Match: E0D929_9ASTE (Ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (Fragment) OS=Alangium sp. SH-2010 PE=3 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 8.2e-39
Identity = 91/112 (81.25%), Postives = 96/112 (85.71%), Query Frame = 1 

Query: 23  KTKASVGFKAGVKDSKLTYYTPSYETKDTDILAALRVTPQSGVPPEEVGAAVAAAESSTS 82
           +TKASVGFKAGVKD KLTYYTPSYETKDTDILAA RVTPQ GVPPEE GAAV AAESST 
Sbjct: 5   ETKASVGFKAGVKDYKLTYYTPSYETKDTDILAAFRVTPQPGVPPEEAGAAV-AAESSTG 64

Query: 83  TWTTVWTDELTSLDRYVTKDDVMDVPAGEENQYIAYLAAYPLDPFEEGSVTN 135
           TWTTVWTD LTSLDRY  +   ++  AGEENQYIAY+ AYPLD FEEGSVTN
Sbjct: 65  TWTTVWTDGLTSLDRYKGRCYHIEPVAGEENQYIAYV-AYPLDLFEEGSVTN 114

[Close]
BLAST of CmaCh11G012110 vs. TAIR10
Match: ATCG00490.1 (ATCG00490.1 ribulose-bisphosphate carboxylases)

HSP 1 Score: 159.1 bits (401), Expect = 1.9e-39
Identity = 86/112 (76.79%), Postives = 93/112 (83.04%), Query Frame = 1 

Query: 23  KTKASVGFKAGVKDSKLTYYTPSYETKDTDILAALRVTPQSGVPPEEVGAAVAAAESSTS 82
           +TKASVGFKAGVK+ KLTYYTP YETKDTDILAA RVTPQ GVPPEE GAAV AAESST 
Sbjct: 6   ETKASVGFKAGVKEYKLTYYTPEYETKDTDILAAFRVTPQPGVPPEEAGAAV-AAESSTG 65

Query: 83  TWTTVWTDELTSLDRYVTKDDVMDVPAGEENQYIAYLAAYPLDPFEEGSVTN 135
           TWTTVWTD LTSLDRY  +   ++   GEE Q+IAY+ AYPLD FEEGSVTN
Sbjct: 66  TWTTVWTDGLTSLDRYKGRCYHIEPVPGEETQFIAYV-AYPLDLFEEGSVTN 115

[Close]
BLAST of CmaCh11G012110 vs. NCBI nr
Match: gi|676232431|gb|AIM18275.1| (ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit, partial (chloroplast) [Erythroxylum deciduum])

HSP 1 Score: 167.9 bits (424), Expect = 1.2e-38
Identity = 91/112 (81.25%), Postives = 95/112 (84.82%), Query Frame = 1 

Query: 23  KTKASVGFKAGVKDSKLTYYTPSYETKDTDILAALRVTPQSGVPPEEVGAAVAAAESSTS 82
           KTKASVGFKAGVKD KLTYYTP YETKDTDILAA RVTPQ GVPPEE GAAV AAESST 
Sbjct: 1   KTKASVGFKAGVKDYKLTYYTPDYETKDTDILAAFRVTPQPGVPPEEAGAAV-AAESSTG 60

Query: 83  TWTTVWTDELTSLDRYVTKDDVMDVPAGEENQYIAYLAAYPLDPFEEGSVTN 135
           TWTTVWTD LTSLDRY  +   ++  AGEENQYIAY+ AYPLD FEEGSVTN
Sbjct: 61  TWTTVWTDGLTSLDRYKGRCYHIEPVAGEENQYIAYV-AYPLDLFEEGSVTN 110

[Close]
BLAST of CmaCh11G012110 vs. NCBI nr
Match: gi|306481307|dbj|BAJ16758.1| (ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit [Alangium sp. SH-2010])

HSP 1 Score: 167.9 bits (424), Expect = 1.2e-38
Identity = 91/112 (81.25%), Postives = 96/112 (85.71%), Query Frame = 1 

Query: 23  KTKASVGFKAGVKDSKLTYYTPSYETKDTDILAALRVTPQSGVPPEEVGAAVAAAESSTS 82
           +TKASVGFKAGVKD KLTYYTPSYETKDTDILAA RVTPQ GVPPEE GAAV AAESST 
Sbjct: 5   ETKASVGFKAGVKDYKLTYYTPSYETKDTDILAAFRVTPQPGVPPEEAGAAV-AAESSTG 64

Query: 83  TWTTVWTDELTSLDRYVTKDDVMDVPAGEENQYIAYLAAYPLDPFEEGSVTN 135
           TWTTVWTD LTSLDRY  +   ++  AGEENQYIAY+ AYPLD FEEGSVTN
Sbjct: 65  TWTTVWTDGLTSLDRYKGRCYHIEPVAGEENQYIAYV-AYPLDLFEEGSVTN 114

[Close]
BLAST of CmaCh11G012110 vs. NCBI nr
Match: gi|557163219|gb|AGZ90842.1| (ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit, partial (chloroplast) [Pouzolzia mixta])

HSP 1 Score: 167.9 bits (424), Expect = 1.2e-38
Identity = 92/112 (82.14%), Postives = 95/112 (84.82%), Query Frame = 1 

Query: 23  KTKASVGFKAGVKDSKLTYYTPSYETKDTDILAALRVTPQSGVPPEEVGAAVAAAESSTS 82
           +TKASVGFKAGVKD KLTYYTP YETKDTDILAA RVTPQ GVPPEE GAAV AAESST 
Sbjct: 6   ETKASVGFKAGVKDYKLTYYTPEYETKDTDILAAFRVTPQPGVPPEEAGAAV-AAESSTG 65

Query: 83  TWTTVWTDELTSLDRYVTKDDVMDVPAGEENQYIAYLAAYPLDPFEEGSVTN 135
           TWTTVWTD LTSLDRY    D+  V AGEENQYIAY+ AYPLD FEEGSVTN
Sbjct: 66  TWTTVWTDGLTSLDRYAGTCDIEPV-AGEENQYIAYV-AYPLDLFEEGSVTN 114

[Close]
BLAST of CmaCh11G012110 vs. NCBI nr
Match: gi|353444763|gb|AER00145.1| (ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit, partial (chloroplast) [Porpax reticulata])

HSP 1 Score: 167.9 bits (424), Expect = 1.2e-38
Identity = 90/112 (80.36%), Postives = 97/112 (86.61%), Query Frame = 1 

Query: 23  KTKASVGFKAGVKDSKLTYYTPSYETKDTDILAALRVTPQSGVPPEEVGAAVAAAESSTS 82
           +TKASVGFKAGVKD KLTYYTP+YETKDTDILAA RVTPQ GVPPEE GAAV AAESST 
Sbjct: 2   ETKASVGFKAGVKDYKLTYYTPNYETKDTDILAAFRVTPQPGVPPEEAGAAV-AAESSTG 61

Query: 83  TWTTVWTDELTSLDRYVTKDDVMDVPAGEENQYIAYLAAYPLDPFEEGSVTN 135
           TWTTVWTD LTSLDRY  +   ++V +GEENQYIAY+ AYPLD FEEGSVTN
Sbjct: 62  TWTTVWTDGLTSLDRYKGRCYHIEVVSGEENQYIAYV-AYPLDLFEEGSVTN 111

[Close]
BLAST of CmaCh11G012110 vs. NCBI nr
Match: gi|353444751|gb|AER00139.1| (ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit, partial (chloroplast) [Porpax reticulata])

HSP 1 Score: 167.9 bits (424), Expect = 1.2e-38
Identity = 90/112 (80.36%), Postives = 97/112 (86.61%), Query Frame = 1 

Query: 23  KTKASVGFKAGVKDSKLTYYTPSYETKDTDILAALRVTPQSGVPPEEVGAAVAAAESSTS 82
           +TKASVGFKAGVKD KLTYYTP+YETKDTDILAA RVTPQ GVPPEE GAAV AAESST 
Sbjct: 2   ETKASVGFKAGVKDYKLTYYTPNYETKDTDILAAFRVTPQPGVPPEEAGAAV-AAESSTG 61

Query: 83  TWTTVWTDELTSLDRYVTKDDVMDVPAGEENQYIAYLAAYPLDPFEEGSVTN 135
           TWTTVWTD LTSLDRY  +   ++V +GEENQYIAY+ AYPLD FEEGSVTN
Sbjct: 62  TWTTVWTDGLTSLDRYKGRCYHIEVVSGEENQYIAYV-AYPLDLFEEGSVTN 111

The following BLAST results are available for this feature:
BLAST of CmaCh11G012110 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RBL_PHAAO1.3e-4080.36Ribulose bisphosphate carboxylase large chain OS=Phalaenopsis aphrodite subsp. f... [more]
RBL_SALPL1.6e-4080.36Ribulose bisphosphate carboxylase large chain (Fragment) OS=Salacia pallescens G... [more]
RBL_SOYBN1.6e-4080.36Ribulose bisphosphate carboxylase large chain OS=Glycine max GN=rbcL PE=1 SV=3[more]
RBL_PLAOC2.2e-4080.36Ribulose bisphosphate carboxylase large chain OS=Platanus occidentalis GN=rbcL P... [more]
RBL_CUCSA2.2e-4080.36Ribulose bisphosphate carboxylase large chain OS=Cucumis sativus GN=rbcL PE=1 SV... [more]
BLAST of CmaCh11G012110 vs. TrEMBL
Match NameE-valueIdentityDescription
U5YGB2_9ROSA8.2e-3982.14Ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (Fragment) OS=Pouz... [more]
A0A0U1X6R2_9ROSI8.2e-3981.25Ribulose bisphosphate carboxylase large chain (Fragment) OS=Erythroxylum deciduu... [more]
G8FKU4_9ASPA8.2e-3980.36Ribulose bisphosphate carboxylase large chain (Fragment) OS=Porpax reticulata GN... [more]
G8FKU2_9ASPA8.2e-3980.36Ribulose bisphosphate carboxylase large chain (Fragment) OS=Porpax reticulata GN... [more]
E0D929_9ASTE8.2e-3981.25Ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (Fragment) OS=Alan... [more]
BLAST of CmaCh11G012110 vs. TAIR10
Match NameE-valueIdentityDescription
ATCG00490.11.9e-3976.79ATCG00490.1 ribulose-bisphosphate carboxylases[more]
BLAST of CmaCh11G012110 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|676232431|gb|AIM18275.1|1.2e-3881.25ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit, partial (chloropl... [more]
gi|306481307|dbj|BAJ16758.1|1.2e-3881.25ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit [Alangium sp. SH-2... [more]
gi|557163219|gb|AGZ90842.1|1.2e-3882.14ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit, partial (chloropl... [more]
gi|353444763|gb|AER00145.1|1.2e-3880.36ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit, partial (chloropl... [more]
gi|353444751|gb|AER00139.1|1.2e-3880.36ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit, partial (chloropl... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR017443RuBisCO_lsu_fd_N
Vocabulary: Biological Process
TermDefinition
GO:0015977carbon fixation
Vocabulary: Molecular Function
TermDefinition
GO:0016984ribulose-bisphosphate carboxylase activity
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0046487 glyoxylate metabolic process
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0019253 reductive pentose-phosphate cycle
biological_process GO:0015977 carbon fixation
cellular_component GO:0009573 chloroplast ribulose bisphosphate carboxylase complex
molecular_function GO:0000287 magnesium ion binding
molecular_function GO:0004497 monooxygenase activity
molecular_function GO:0016984 ribulose-bisphosphate carboxylase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh11G012110.1CmaCh11G012110.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR017443Ribulose bisphosphate carboxylase, large subunit, ferrodoxin-like N-terminalGENE3DG3DSA:3.30.70.150coord: 39..134
score: 5.6
IPR017443Ribulose bisphosphate carboxylase, large subunit, ferrodoxin-like N-terminalPFAMPF02788RuBisCO_large_Ncoord: 41..133
score: 7.8
IPR017443Ribulose bisphosphate carboxylase, large subunit, ferrodoxin-like N-terminalunknownSSF54966RuBisCO, large subunit, small (N-terminal) domaincoord: 26..134
score: 7.2
NoneNo IPR availablePANTHERPTHR23321RIBOSOMAL PROTEIN S15, BACTERIAL AND ORGANELLARcoord: 42..134
score: 2.7
NoneNo IPR availablePANTHERPTHR23321:SF31RIBULOSE BISPHOSPHATE CARBOXYLASE LARGE CHAIN-RELATEDcoord: 42..134
score: 2.7

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh11G012110Cucumber (Gy14) v1cgycmaB0055
CmaCh11G012110Wild cucumber (PI 183967)cmacpiB105
CmaCh11G012110Cucumber (Chinese Long) v2cmacuB106
CmaCh11G012110Melon (DHL92) v3.5.1cmameB108
CmaCh11G012110Watermelon (Charleston Gray)cmawcgB114
CmaCh11G012110Watermelon (97103) v1cmawmB101
CmaCh11G012110Bottle gourd (USVL1VR-Ls)cmalsiB133
CmaCh11G012110Bottle gourd (USVL1VR-Ls)cmalsiB142
CmaCh11G012110Melon (DHL92) v3.6.1cmamedB116
CmaCh11G012110Cucumber (Chinese Long) v3cmacucB0120
CmaCh11G012110Watermelon (97103) v2cmawmbB117
CmaCh11G012110Wax gourdcmawgoB0171