CmaCh09G012680.1 (mRNA) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: CDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTCATGGGTAATGGTTTCAAGCTCTTTCACACCATTTTCTTAGTGATTGTTTGGCAATATTGTGCAAAAGTGGGTGCCACTTTTGGGGATGAAACCGGTGTCATAAATCTCGATCATCAATTTTCATTTCGTGCCTTTGGATCACATGACACACAAGCCCCCATTGTTGCACCAATTGGAAGTAGCACAAATGTTTTAGTGGCAGCACCATTTGGAAGCATCGCTCAAACTCCCGAGGCTCTAACCCCAAAGGCTTCGTCAACTGAAAGCATTGCTCTAACCCCGGAGGTTGCATCAGTTGAAAGCATTGCTCTAACCCCAGAGGTTGCATCGGTTGAAAGCATTGCTCTAACCCCAGAGGTTGCATCAGTTGAAAGCATTGCTCTAACTCCGAAGGCTGCACGAGTTGGAAGCACTCAAACCACAACCATTACACCAATTGGAAGTAGCACACAAGCATGA ATGGTCATGGGTAATGGTTTCAAGCTCTTTCACACCATTTTCTTAGTGATTGTTTGGCAATATTGTGCAAAAGTGGGTGCCACTTTTGGGGATGAAACCGGTGTCATAAATCTCGATCATCAATTTTCATTTCGTGCCTTTGGATCACATGACACACAAGCCCCCATTGTTGCACCAATTGGAAGTAGCACAAATGTTTTAGTGGCAGCACCATTTGGAAGCATCGCTCAAACTCCCGAGGCTCTAACCCCAAAGGCTTCGTCAACTGAAAGCATTGCTCTAACCCCGGAGGTTGCATCAGTTGAAAGCATTGCTCTAACCCCAGAGGTTGCATCGGTTGAAAGCATTGCTCTAACCCCAGAGGTTGCATCAGTTGAAAGCATTGCTCTAACTCCGAAGGCTGCACGAGTTGGAAGCACTCAAACCACAACCATTACACCAATTGGAAGTAGCACACAAGCATGA ATGGTCATGGGTAATGGTTTCAAGCTCTTTCACACCATTTTCTTAGTGATTGTTTGGCAATATTGTGCAAAAGTGGGTGCCACTTTTGGGGATGAAACCGGTGTCATAAATCTCGATCATCAATTTTCATTTCGTGCCTTTGGATCACATGACACACAAGCCCCCATTGTTGCACCAATTGGAAGTAGCACAAATGTTTTAGTGGCAGCACCATTTGGAAGCATCGCTCAAACTCCCGAGGCTCTAACCCCAAAGGCTTCGTCAACTGAAAGCATTGCTCTAACCCCGGAGGTTGCATCAGTTGAAAGCATTGCTCTAACCCCAGAGGTTGCATCGGTTGAAAGCATTGCTCTAACCCCAGAGGTTGCATCAGTTGAAAGCATTGCTCTAACTCCGAAGGCTGCACGAGTTGGAAGCACTCAAACCACAACCATTACACCAATTGGAAGTAGCACACAAGCATGA MVMGNGFKLFHTIFLVIVWQYCAKVGATFGDETGVINLDHQFSFRAFGSHDTQAPIVAPIGSSTNVLVAAPFGSIAQTPEALTPKASSTESIALTPEVASVESIALTPEVASVESIALTPEVASVESIALTPKAARVGSTQTTTITPIGSSTQA
BLAST of CmaCh09G012680.1 vs. TrEMBL
Match: A0A0A0K662_CUCSA (Ankyrin repeat protein OS=Cucumis sativus GN=Csa_7G398740 PE=4 SV=1) HSP 1 Score: 70.1 bits (170), Expect = 2.7e-09 Identity = 56/151 (37.09%), Postives = 75/151 (49.67%), Query Frame = 1
BLAST of CmaCh09G012680.1 vs. TrEMBL
Match: A0A0A0K5J0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G398750 PE=4 SV=1) HSP 1 Score: 70.1 bits (170), Expect = 2.7e-09 Identity = 39/89 (43.82%), Postives = 49/89 (55.06%), Query Frame = 1
BLAST of CmaCh09G012680.1 vs. TrEMBL
Match: A0A0A0K7W7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G399280 PE=4 SV=1) HSP 1 Score: 66.6 bits (161), Expect = 3.0e-08 Identity = 45/100 (45.00%), Postives = 54/100 (54.00%), Query Frame = 1
BLAST of CmaCh09G012680.1 vs. NCBI nr
Match: gi|659101536|ref|XP_008451657.1| (PREDICTED: uncharacterized transmembrane protein DDB_G0289901-like [Cucumis melo]) HSP 1 Score: 86.3 bits (212), Expect = 5.2e-14 Identity = 42/75 (56.00%), Postives = 51/75 (68.00%), Query Frame = 1
BLAST of CmaCh09G012680.1 vs. NCBI nr
Match: gi|659101534|ref|XP_008451656.1| (PREDICTED: cell wall protein AWA1-like [Cucumis melo]) HSP 1 Score: 81.6 bits (200), Expect = 1.3e-12 Identity = 40/75 (53.33%), Postives = 48/75 (64.00%), Query Frame = 1
BLAST of CmaCh09G012680.1 vs. NCBI nr
Match: gi|700189732|gb|KGN44965.1| (hypothetical protein Csa_7G398750 [Cucumis sativus]) HSP 1 Score: 70.1 bits (170), Expect = 3.9e-09 Identity = 39/89 (43.82%), Postives = 49/89 (55.06%), Query Frame = 1
BLAST of CmaCh09G012680.1 vs. NCBI nr
Match: gi|700189730|gb|KGN44963.1| (Ankyrin repeat protein [Cucumis sativus]) HSP 1 Score: 70.1 bits (170), Expect = 3.9e-09 Identity = 56/151 (37.09%), Postives = 75/151 (49.67%), Query Frame = 1
BLAST of CmaCh09G012680.1 vs. NCBI nr
Match: gi|700189736|gb|KGN44969.1| (hypothetical protein Csa_7G399280 [Cucumis sativus]) HSP 1 Score: 66.6 bits (161), Expect = 4.3e-08 Identity = 45/100 (45.00%), Postives = 54/100 (54.00%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
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