CmaCh09G006390.1 (mRNA) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh09G006390.1
Type	mRNA
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	U-box domain-containing protein
Location	Cma_Chr09 : 3014929 .. 3015912 (+)
Sequence length	984

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAAACTCATCAACCAAAGCTCAAAACTCAGCTTTTCTCTTGCGGATTCTTCGGCCACTGTACTCGCTCCGTCCTCAGCCCCACCGCCTCTCATTCCCCTTCGCTCCCTTCCCTTCCCTCCGCCTCCGACCAACCCCCACCCCACTCCCGCCGTCCACAGCTTCTCGATTCCGAATCCTCCTCCTCCTCCGCCTCCCAAAGCTTCACCCAATGGAGATTCCCACTTCCACATTCACCAATTTTTACCCAACACCCTTCAATTCCAGACCCACCTTCTACTTTCTCCATTCCTCCGCCACCATCCATCTCCGCAGCAACCCTTAAAGAAATCCTCCACCTCGCAGAGCTCCAACTCTGCTCCGCCTCAGACTCCGACCGCCTCGCCGCTCTCCAACTCCTCGAACGCTCCTTGGTTCCCGACCCATCTCTAGACCCTGACTGCACTCCCGAACTCATGCGCGGCATAATCGCAAATTTGAACACCAAAACAGGTTCGAAACCATCCACCAAAATTTTGCTAGCCCTATGCTTGGCAGAGAGTAATCGTCACATTGCGGTGGAGGCAGGGGCGGTCGGCGCAGTGATAGAATCGCTGCCGGAGATGGAAGACCCCGCGGCAGAACGAGCACTCGCGTCGCTCGAACTTATGTGTACGGTGCCTGAGGGAGCGGCAGAGGTGAGGGCCCACGCGCTCTCTGTGCCAGCGATGGTGATGATGATGGGAAGAATGGCAGCCAGAGGGAAGGAGTCAGCCATAAGTGTGCTTGGAGTTATTTTCGACAATGGGGTCTCGCCGGAAGCCGAGTCCGCGGTAACAGCGCCGCCGGAGGAGGTGGCGCGTGCTGTCGTGTTGGCGCTGCAGGGAGATAGTAGTGCAAGGGGGAGGAGAAAAGGGGCGAGGCTTCTGAAGGCACTGGAAGAGCAGCAAGAGGGCTCCTCCACCGCAGGTGTAGATCCGGCGACGGTGGTCGGCCGGAGTTGA

mRNA sequence

ATGAAAACTCATCAACCAAAGCTCAAAACTCAGCTTTTCTCTTGCGGATTCTTCGGCCACTGTACTCGCTCCGTCCTCAGCCCCACCGCCTCTCATTCCCCTTCGCTCCCTTCCCTTCCCTCCGCCTCCGACCAACCCCCACCCCACTCCCGCCGTCCACAGCTTCTCGATTCCGAATCCTCCTCCTCCTCCGCCTCCCAAAGCTTCACCCAATGGAGATTCCCACTTCCACATTCACCAATTTTTACCCAACACCCTTCAATTCCAGACCCACCTTCTACTTTCTCCATTCCTCCGCCACCATCCATCTCCGCAGCAACCCTTAAAGAAATCCTCCACCTCGCAGAGCTCCAACTCTGCTCCGCCTCAGACTCCGACCGCCTCGCCGCTCTCCAACTCCTCGAACGCTCCTTGGTTCCCGACCCATCTCTAGACCCTGACTGCACTCCCGAACTCATGCGCGGCATAATCGCAAATTTGAACACCAAAACAGGTTCGAAACCATCCACCAAAATTTTGCTAGCCCTATGCTTGGCAGAGAGTAATCGTCACATTGCGGTGGAGGCAGGGGCGGTCGGCGCAGTGATAGAATCGCTGCCGGAGATGGAAGACCCCGCGGCAGAACGAGCACTCGCGTCGCTCGAACTTATGTGTACGGTGCCTGAGGGAGCGGCAGAGGTGAGGGCCCACGCGCTCTCTGTGCCAGCGATGGTGATGATGATGGGAAGAATGGCAGCCAGAGGGAAGGAGTCAGCCATAAGTGTGCTTGGAGTTATTTTCGACAATGGGGTCTCGCCGGAAGCCGAGTCCGCGGTAACAGCGCCGCCGGAGGAGGTGGCGCGTGCTGTCGTGTTGGCGCTGCAGGGAGATAGTAGTGCAAGGGGGAGGAGAAAAGGGGCGAGGCTTCTGAAGGCACTGGAAGAGCAGCAAGAGGGCTCCTCCACCGCAGGTGTAGATCCGGCGACGGTGGTCGGCCGGAGTTGA

Coding sequence (CDS)

ATGAAAACTCATCAACCAAAGCTCAAAACTCAGCTTTTCTCTTGCGGATTCTTCGGCCACTGTACTCGCTCCGTCCTCAGCCCCACCGCCTCTCATTCCCCTTCGCTCCCTTCCCTTCCCTCCGCCTCCGACCAACCCCCACCCCACTCCCGCCGTCCACAGCTTCTCGATTCCGAATCCTCCTCCTCCTCCGCCTCCCAAAGCTTCACCCAATGGAGATTCCCACTTCCACATTCACCAATTTTTACCCAACACCCTTCAATTCCAGACCCACCTTCTACTTTCTCCATTCCTCCGCCACCATCCATCTCCGCAGCAACCCTTAAAGAAATCCTCCACCTCGCAGAGCTCCAACTCTGCTCCGCCTCAGACTCCGACCGCCTCGCCGCTCTCCAACTCCTCGAACGCTCCTTGGTTCCCGACCCATCTCTAGACCCTGACTGCACTCCCGAACTCATGCGCGGCATAATCGCAAATTTGAACACCAAAACAGGTTCGAAACCATCCACCAAAATTTTGCTAGCCCTATGCTTGGCAGAGAGTAATCGTCACATTGCGGTGGAGGCAGGGGCGGTCGGCGCAGTGATAGAATCGCTGCCGGAGATGGAAGACCCCGCGGCAGAACGAGCACTCGCGTCGCTCGAACTTATGTGTACGGTGCCTGAGGGAGCGGCAGAGGTGAGGGCCCACGCGCTCTCTGTGCCAGCGATGGTGATGATGATGGGAAGAATGGCAGCCAGAGGGAAGGAGTCAGCCATAAGTGTGCTTGGAGTTATTTTCGACAATGGGGTCTCGCCGGAAGCCGAGTCCGCGGTAACAGCGCCGCCGGAGGAGGTGGCGCGTGCTGTCGTGTTGGCGCTGCAGGGAGATAGTAGTGCAAGGGGGAGGAGAAAAGGGGCGAGGCTTCTGAAGGCACTGGAAGAGCAGCAAGAGGGCTCCTCCACCGCAGGTGTAGATCCGGCGACGGTGGTCGGCCGGAGTTGA

Protein sequence

MKTHQPKLKTQLFSCGFFGHCTRSVLSPTASHSPSLPSLPSASDQPPPHSRRPQLLDSESSSSSASQSFTQWRFPLPHSPIFTQHPSIPDPPSTFSIPPPPSISAATLKEILHLAELQLCSASDSDRLAALQLLERSLVPDPSLDPDCTPELMRGIIANLNTKTGSKPSTKILLALCLAESNRHIAVEAGAVGAVIESLPEMEDPAAERALASLELMCTVPEGAAEVRAHALSVPAMVMMMGRMAARGKESAISVLGVIFDNGVSPEAESAVTAPPEEVARAVVLALQGDSSARGRRKGARLLKALEEQQEGSSTAGVDPATVVGRS

Homology

[Close]

BLAST of CmaCh09G006390.1 vs. Swiss-Prot
Match: PUB26_ARATH (U-box domain-containing protein 26 OS=Arabidopsis thaliana GN=PUB26 PE=2 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 3.5e-12
Identity = 66/210 (31.43%), Postives = 99/210 (47.14%), Query Frame = 1


Query: 119 LCSASDSDRLAALQLLERSLVPDPSLDPDC----TPELMRGIIANLNTKTGSKPSTKI-- 178
           L  +S   R+ A  L+E  L    S+D       +  +  G++  L     S+ + KI  
Sbjct: 206 LFDSSIEIRVNAAALIEMVLTGAKSMDLKLIISGSDSIFEGVLDLLKNPISSRRALKIGI 265

Query: 179 --LLALCLAESNRHIAVEAGAVGAVIESLPEMEDPA-AERALASLELMCTVPEGAAEVRA 238
             + ALCL +  RH+A+ AGA G +I+ L    D    ER LA++EL+C +PEG A    
Sbjct: 266 KAIFALCLVKQTRHLAISAGAPGILIDRLAADFDRCDTERGLATVELLCRLPEGCAAFGE 325

Query: 239 HALSVPAMVMMMGRMAARGKESAISVLGVIFDNGVSPEAESAVTAPPEEVARAVVLALQG 298
           HAL+VP MV  + R++ R  E A   L  +     + E      A    +   ++L +Q 
Sbjct: 326 HALTVPLMVKTILRVSDRATEYAAGALLAL----CTAEERCRDEAAAAGLVTQLLLLVQS 385

Query: 299 DSSARGRRKGARLLKALEEQQEGSSTAGVD 320
           D + R +RK   LLK L +     ST   D
Sbjct: 386 DCTERAKRKAQMLLKLLRDSWPDDSTVHSD 411

[Close]

BLAST of CmaCh09G006390.1 vs. Swiss-Prot
Match: PUB25_ARATH (U-box domain-containing protein 25 OS=Arabidopsis thaliana GN=PUB25 PE=2 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 7.4e-10
Identity = 51/150 (34.00%), Postives = 78/150 (52.00%), Query Frame = 1


Query: 160 LNTKTGSKPSTKILLALCLAESNRHIAVEAGAVGAVIESLPEMEDPA-AERALASLELMC 219
           ++++   K   K L ALC  +S RHIA+ AGA   +I+ L    D    ERALA++EL+C
Sbjct: 253 ISSRRALKIGIKTLFALCSVKSTRHIAITAGAPEILIDRLAADFDRCDTERALATVELLC 312

Query: 220 TVPEGAAEVRAHALSVPAMVMMMGRMAARGKESAISVLGVIFDNGVSPEAESAVTAPPEE 279
             PEG A    HAL+VP +V  + R++ R  E A   L  +     + E      A    
Sbjct: 313 RTPEGCAAFGEHALTVPLLVKTILRVSDRATEYAAGALLAL----CTAEERWREEAAGAG 372

Query: 280 VARAVVLALQGDSSARGRRKGARLLKALEE 309
           V   ++L +Q + + R ++K  +LLK L +
Sbjct: 373 VVVQLLLMVQSECTERAKKKAQKLLKLLRD 398

[Close]

BLAST of CmaCh09G006390.1 vs. TrEMBL
Match: A0A0A0LEW4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G895740 PE=4 SV=1)

HSP 1 Score: 501.5 bits (1290), Expect = 7.7e-139
Identity = 275/315 (87.30%), Postives = 288/315 (91.43%), Query Frame = 1


Query: 1   MKTHQPKLKTQLFSCGFFGHCTRSVLSPTASHSPSLPSLPSASDQPPPH-SRRPQLLDSE 60
           M+THQPKLKTQLFSCGFF HCTRSVLSPTASHSP+LPSLPSASDQPPP  SRRP L DSE
Sbjct: 1   MRTHQPKLKTQLFSCGFFRHCTRSVLSPTASHSPALPSLPSASDQPPPPPSRRPPLPDSE 60

Query: 61  SSSSSASQSFTQWRFPLPHSPIFTQHPSIPDPPSTFSIPPP----PSISAATLKEILHLA 120
           SSSSSASQSFTQWRFPLPHSPIFTQ PSI DPPSTFSIPPP    P ISA+ LKEIL +A
Sbjct: 61  SSSSSASQSFTQWRFPLPHSPIFTQQPSISDPPSTFSIPPPDPLPPPISASALKEILQVA 120

Query: 121 ELQLCSASDSDRLAALQLLERSLVPDPSLDPDCTPELMRGIIANLNTKTGSKPSTKILLA 180
           ELQL SASDSDRLAALQLLERSLVP+PSLD DCTPELMRG+I + N KTGSKP+TKILLA
Sbjct: 121 ELQLSSASDSDRLAALQLLERSLVPNPSLDSDCTPELMRGLIESFNIKTGSKPATKILLA 180

Query: 181 LCLAESNRHIAVEAGAVGAVIESLPEMEDPAAERALASLELMCTVPEGAAEVRAHALSVP 240
           LCLAE NRH+AVEAGAVGAVIESLPEMED AAERALASLELMCTV EGAAEVR+HALSVP
Sbjct: 181 LCLAEGNRHVAVEAGAVGAVIESLPEMEDAAAERALASLELMCTVAEGAAEVRSHALSVP 240

Query: 241 AMVMMMGRMAARGKESAISVLGVIFDNGVSPEAESAVTAPPEEVARAVVLALQGDSSARG 300
           AMV MMGRMAARGKESAISVLGVIFD+GVS EA+S VTAPPEEVARAVVLALQGDSS RG
Sbjct: 241 AMVTMMGRMAARGKESAISVLGVIFDSGVSSEAKSGVTAPPEEVARAVVLALQGDSSVRG 300

Query: 301 RRKGARLLKALEEQQ 311
           RRKGARLLK L+EQQ
Sbjct: 301 RRKGARLLKTLQEQQ 315

[Close]

BLAST of CmaCh09G006390.1 vs. TrEMBL
Match: A0A061GIN4_THECC (ARM repeat superfamily protein, putative OS=Theobroma cacao GN=TCM_037166 PE=4 SV=1)

HSP 1 Score: 345.9 bits (886), Expect = 5.4e-92
Identity = 207/344 (60.17%), Postives = 246/344 (71.51%), Query Frame = 1


Query: 1   MKTHQ--PKLKTQ---LFSCGFFGHCTRSVLSPTASHSPSLP---------------SLP 60
           MKTHQ  PKLKT    LFSCGFF +CT+S LSPT  HSPSLP               + P
Sbjct: 1   MKTHQHHPKLKTHPRPLFSCGFFRNCTQSTLSPTTPHSPSLPLSSSQPPPSSPPPSSTPP 60

Query: 61  SASDQPPPHSRRPQLL-------DSESSSSSASQSFTQWRFPLPHSPIFTQHPSIPDP-- 120
             S  PPP +R P+          S SSSSSAS SFTQW+FP+P SP+  QHPS P P  
Sbjct: 61  HPSPPPPPPARPPKNSFQQRPESSSSSSSSSASHSFTQWKFPIPTSPLH-QHPSQPTPHF 120

Query: 121 -PSTFSIPPPPSISAATLKEILHLAELQLCSASDSDRLAALQLLERSLVPDPSLDPDCTP 180
            P   S PPPP +S+A L+E+ H+AELQL + S S++LAALQLL+RSLVP+P  DP C P
Sbjct: 121 QPPPPSPPPPPPLSSANLQELFHIAELQLSTGSQSEQLAALQLLDRSLVPNPPSDPICPP 180

Query: 181 ELMRGIIANLNTKTGSKPSTKILLALCLAESNRHIAVEAGAVGAVIESLPEMEDPAAERA 240
           ELMRGI++NL    G KP+TKILLALCLAE NRH+AVEAGAVGAV+E + E+E  AAERA
Sbjct: 181 ELMRGIVSNLKNDAGVKPATKILLALCLAEGNRHVAVEAGAVGAVVEVVAELEGAAAERA 240

Query: 241 LASLELMCTVPEGAAEVRAHALSVPAMVMMMGRMAARGKESAISVLGVIFDNGV------ 300
           LA+LELMCTV EGAAEVRAHAL++PAMV +MGR+A RG+E AISV+ VI+  G       
Sbjct: 241 LAALELMCTVAEGAAEVRAHALAMPAMVSVMGRLAGRGREYAISVISVIYGGGCVGGGGG 300

Query: 301 SPEAESAVTAPPEEVARAVVLALQGDSSARGRRKGARLLKALEE 309
             + E  V APPEEVARAVVLALQG+ +ARGRRKGA+LL+ L+E
Sbjct: 301 EEQEEEMVPAPPEEVARAVVLALQGECTARGRRKGAQLLRTLQE 343

[Close]

BLAST of CmaCh09G006390.1 vs. TrEMBL
Match: V4UCX0_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10008902mg PE=4 SV=1)

HSP 1 Score: 338.2 bits (866), Expect = 1.1e-89
Identity = 200/323 (61.92%), Postives = 232/323 (71.83%), Query Frame = 1


Query: 1   MKTHQPKLKTQ---LFSCGFFGHCTRSVLSPTASHSPSLPSLPSASDQPPPHSRRP---- 60
           MK+H PKLKTQ   LFSCGFF HCT+SVLSPT SHSP LP  P     PPP    P    
Sbjct: 1   MKSHHPKLKTQPRPLFSCGFFCHCTQSVLSPTNSHSPPLPLTPEEPPPPPPPPPPPPPPP 60

Query: 61  QLLDSESSSSSASQSFTQWRFPLPHSPIFTQHPSIPDP-PSTFSIPPPPSISAATLKEIL 120
              +S SSSSS SQSFTQW+FPLP SP+  +  + P P P     P PP I   +L+E+ 
Sbjct: 61  HQPESSSSSSSTSQSFTQWKFPLPTSPLHPRFRTDPKPEPDLPPKPLPPPIPFTSLQELF 120

Query: 121 HLAELQLCSASDSDRLAALQLLERSLVPDPSLDPDCTPELMRGIIANLNTKTGSKPSTKI 180
            LAELQL S SDSDRLAAL LLERSL+P+P  D  C PELMRG++ NL  K G+KP+TKI
Sbjct: 121 LLAELQLSSGSDSDRLAALYLLERSLLPNPPSDQACQPELMRGVVGNLKNKAGAKPATKI 180

Query: 181 LLALCLAESNRHIAVEAGAVGAVIESLPEMEDPAAERALASLELMCTVPEGAAEVRAHAL 240
           LLALCLAESNR +AVEAGAVGAVIE + E++  A ERALA+LELMCTV EGA E RAHAL
Sbjct: 181 LLALCLAESNRRVAVEAGAVGAVIEVVAELDAAAGERALAALELMCTVAEGAEETRAHAL 240

Query: 241 SVPAMVMMMGRMAARGKESAISVLGVIFDNGVSPEAESAVTAPPEEVARAVVLALQGDSS 300
           +VP MV MMG+MA RGKE AISVL VI+  G  P     + APPEEVARAV LALQG+ +
Sbjct: 241 AVPVMVTMMGQMAGRGKEYAISVLAVIYGGGDQP----VLAAPPEEVARAVELALQGNCT 300

Query: 301 ARGRRKGARLLKALEEQQEGSST 316
            RGRRKG +LLK+L+E  +  +T
Sbjct: 301 PRGRRKGTQLLKSLKEYGQPDTT 319

[Close]

BLAST of CmaCh09G006390.1 vs. TrEMBL
Match: B9RS36_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0802650 PE=4 SV=1)

HSP 1 Score: 323.2 bits (827), Expect = 3.7e-85
Identity = 194/340 (57.06%), Postives = 236/340 (69.41%), Query Frame = 1


Query: 1   MKTHQPKLKTQ---LFSCGFFGHCTRSVLSPTASHSPSLP-------SLPSASDQPPP-- 60
           MKTH PKLKTQ    FSCGFF HCT++ LSPT  H PSLP        LP +   PPP  
Sbjct: 1   MKTHHPKLKTQPRPFFSCGFFRHCTQTTLSPTTPHPPSLPLCSTAPPPLPPSPPPPPPPP 60

Query: 61  ----HSRRPQLLDSE-------SSSSSASQSFTQWRFPLPHSPIFTQHPSIPDPPSTFSI 120
                S++P LL S+       SSSS+ SQSFTQW+FPL  SP+  +      P ST  +
Sbjct: 61  PPPLQSQQPLLLKSQQPESSSSSSSSTTSQSFTQWKFPLVTSPLHPESDPQTKPDSTIPL 120

Query: 121 PPPPSISAATLKEILHLAELQLCSASDSDRLAALQLLERSLVPDPSLDPDCTPELMRGII 180
           PPP  I++  L+E+ H AELQL   S+ ++LA+L LLERSLVP+P     C P+LMR ++
Sbjct: 121 PPP--INSTKLQEVFHAAELQLSGGSEHEKLASLHLLERSLVPNPPSHSVCPPQLMRALV 180

Query: 181 ANLNTKTGSKPSTKILLALCLAESNRHIAVEAGAVGAVIESLPEMEDPAAERALASLELM 240
           ANL  K G+KP+TKILLALCLAE+NRH+AVEAGAVG +IE + E+E PAAERALA+LEL 
Sbjct: 181 ANLKNKAGAKPATKILLALCLAEANRHVAVEAGAVGTIIEVVMELEAPAAERALAALELT 240

Query: 241 CTVPEGAAEVRAHALSVPAMVMMMGRMAARGKESAISVLGVIFDNG--------VSPEAE 300
           CTV EGAAE+R HAL+VP MV MMG+++ RGKE AIS L V++  G        V+ + E
Sbjct: 241 CTVEEGAAELRTHALAVPVMVAMMGKVSGRGKEYAISALAVVYGGGGGEGGGGLVAVDEE 300

Query: 301 SAVT-APPEEVARAVVLALQGDSSARGRRKGARLLKALEE 309
             V  APPEEVARAVVLALQGD +ARGRRKG +LLKALEE
Sbjct: 301 VQVQHAPPEEVARAVVLALQGDCTARGRRKGHQLLKALEE 338

[Close]

BLAST of CmaCh09G006390.1 vs. TrEMBL
Match: A0A067KDL2_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07768 PE=4 SV=1)

HSP 1 Score: 321.6 bits (823), Expect = 1.1e-84
Identity = 196/344 (56.98%), Postives = 232/344 (67.44%), Query Frame = 1


Query: 1   MKTHQPKLKTQ---LFSCGFFGHCTRSVLSPTASHSPSLPS---LPSASDQPP------- 60
           M+TH+PKLKTQ    FSCGFF HCT++ LSPT  HSPSLP+   LPS+   PP       
Sbjct: 1   MRTHRPKLKTQSRPFFSCGFFRHCTQTALSPTTPHSPSLPTSQPLPSSLPPPPLPSPPPP 60

Query: 61  -----------PHSRRPQLLDSESSSSSASQSFTQWRFPLPHSPIFTQHPSIP-DPPSTF 120
                      P SR P    S SSSSS SQSFTQWRFPL +SP+    P+     P T 
Sbjct: 61  PVLPPQPQPQTPLSRAPPAESSSSSSSSTSQSFTQWRFPLVNSPLHQHSPAETITQPKTD 120

Query: 121 S----IPPPPSISAATLKEILHLAELQLCSASDSDRLAALQLLERSLVPDPSLDPDCTPE 180
           S    +P PP I +  L+E+   AELQL + S+S++LAAL LLERSLVP+P  DP C  E
Sbjct: 121 SPRALVPLPPPIHSDELQELFREAELQLSTGSESEKLAALHLLERSLVPNPPSDPVCPLE 180

Query: 181 LMRGIIANLNTKTGSKPSTKILLALCLAESNRHIAVEAGAVGAVIESLPEMEDPAAERAL 240
           LMRG++ NL  K G+K +TKILLALCLAE NRH+AV+AG VG V+E   E+E P AERAL
Sbjct: 181 LMRGVVVNLKNKAGAKAATKILLALCLAEGNRHVAVKAGTVGTVVEVTMELEGPVAERAL 240

Query: 241 ASLELMCTVPEGAAEVRAHALSVPAMVMMMGRMAARGKESAISVLGVIFDNGVSPEAESA 300
           A+LELMCTV EGAAE+RAHAL++P MV  MG M  RGKE AIS L V++  GV    E  
Sbjct: 241 AALELMCTVEEGAAELRAHALAMPVMVAKMGEMEGRGKEYAISALSVVYGGGVLD--EQV 300

Query: 301 VTAPPEEVARAVVLALQGDSSARGRRKGARLLKALEEQQEGSST 316
             APPEEVARAV+LALQGD +AR RRKGA+LLKAL+E     ST
Sbjct: 301 HQAPPEEVARAVILALQGDCTARARRKGAQLLKALQEFGRADST 342

[Close]

BLAST of CmaCh09G006390.1 vs. TAIR10
Match: AT5G11550.1 (AT5G11550.1 ARM repeat superfamily protein)

HSP 1 Score: 269.6 bits (688), Expect = 2.5e-72
Identity = 170/312 (54.49%), Postives = 200/312 (64.10%), Query Frame = 1


Query: 2   KTHQPKLKTQLFSCGFFGHCTRSVLSPTASHSPSLPSLPSASDQPPPHSRRPQLLDSESS 61
           K H P     LFSCGFF  CT+SVLSPT+ H            Q P          S SS
Sbjct: 9   KPHAPP--RPLFSCGFFRRCTQSVLSPTSPHQ-----------QQPRRKATTTSSSSSSS 68

Query: 62  SSSASQSFTQWRFPLPHSPIFTQHPSIPDPPSTFSIPPPPSISAATLKEILHLAELQLCS 121
           S+S SQSFTQWRFP  H     Q PS   PP     PPPP     TL+E   +AEL L S
Sbjct: 69  STSTSQSFTQWRFP--HH--LDQTPSTAPPPPHPPPPPPPLPVTTTLQETFQIAELHLTS 128

Query: 122 ASDSDRLAALQLLERSLVPDPSLDPDCTPELMRGIIANL---NTKTGSKPSTKILLALCL 181
            S+SD+L ALQLLER +VPDP  DP C P LMRG+++ L   N    +K  TKILLALCL
Sbjct: 129 VSESDKLLALQLLERVVVPDPPSDPTCPPGLMRGLVSCLRSNNKIVTAKYVTKILLALCL 188

Query: 182 AESNRHIAVEAGAVGAVIESLPEMEDPAAERALASLELMCTVPEGAAEVRAHALSVPAMV 241
           AE NRH+AVEAGA  AV+E+   +E  A ERALA+LELMCT  EGAAEVRAHA++VPAMV
Sbjct: 189 AEGNRHVAVEAGAARAVVETAAGLEISAVERALAALELMCTTAEGAAEVRAHAMTVPAMV 248

Query: 242 MMMGRMAARGKESAISVLGVIFDNG--VSPEAESAVTAPPEEVARAVVLALQGDSSARGR 301
            +M R+A RG+E AIS+L V++  G       E    AP EEVARAV LAL+G+ +ARG+
Sbjct: 249 AVMARLAGRGREYAISILSVVYGKGGEGGDSGEEIAVAPAEEVARAVALALEGECTARGK 303

Query: 302 RKGARLLKALEE 309
           RKGA+LLK LEE
Sbjct: 309 RKGAQLLKTLEE 303

[Close]

BLAST of CmaCh09G006390.1 vs. TAIR10
Match: AT1G49780.1 (AT1G49780.1 plant U-box 26)

HSP 1 Score: 73.9 bits (180), Expect = 2.0e-13
Identity = 66/210 (31.43%), Postives = 99/210 (47.14%), Query Frame = 1


Query: 119 LCSASDSDRLAALQLLERSLVPDPSLDPDC----TPELMRGIIANLNTKTGSKPSTKI-- 178
           L  +S   R+ A  L+E  L    S+D       +  +  G++  L     S+ + KI  
Sbjct: 206 LFDSSIEIRVNAAALIEMVLTGAKSMDLKLIISGSDSIFEGVLDLLKNPISSRRALKIGI 265

Query: 179 --LLALCLAESNRHIAVEAGAVGAVIESLPEMEDPA-AERALASLELMCTVPEGAAEVRA 238
             + ALCL +  RH+A+ AGA G +I+ L    D    ER LA++EL+C +PEG A    
Sbjct: 266 KAIFALCLVKQTRHLAISAGAPGILIDRLAADFDRCDTERGLATVELLCRLPEGCAAFGE 325

Query: 239 HALSVPAMVMMMGRMAARGKESAISVLGVIFDNGVSPEAESAVTAPPEEVARAVVLALQG 298
           HAL+VP MV  + R++ R  E A   L  +     + E      A    +   ++L +Q 
Sbjct: 326 HALTVPLMVKTILRVSDRATEYAAGALLAL----CTAEERCRDEAAAAGLVTQLLLLVQS 385

Query: 299 DSSARGRRKGARLLKALEEQQEGSSTAGVD 320
           D + R +RK   LLK L +     ST   D
Sbjct: 386 DCTERAKRKAQMLLKLLRDSWPDDSTVHSD 411

[Close]

BLAST of CmaCh09G006390.1 vs. TAIR10
Match: AT3G19380.1 (AT3G19380.1 plant U-box 25)

HSP 1 Score: 66.2 bits (160), Expect = 4.2e-11
Identity = 51/150 (34.00%), Postives = 78/150 (52.00%), Query Frame = 1


Query: 160 LNTKTGSKPSTKILLALCLAESNRHIAVEAGAVGAVIESLPEMEDPA-AERALASLELMC 219
           ++++   K   K L ALC  +S RHIA+ AGA   +I+ L    D    ERALA++EL+C
Sbjct: 253 ISSRRALKIGIKTLFALCSVKSTRHIAITAGAPEILIDRLAADFDRCDTERALATVELLC 312

Query: 220 TVPEGAAEVRAHALSVPAMVMMMGRMAARGKESAISVLGVIFDNGVSPEAESAVTAPPEE 279
             PEG A    HAL+VP +V  + R++ R  E A   L  +     + E      A    
Sbjct: 313 RTPEGCAAFGEHALTVPLLVKTILRVSDRATEYAAGALLAL----CTAEERWREEAAGAG 372

Query: 280 VARAVVLALQGDSSARGRRKGARLLKALEE 309
           V   ++L +Q + + R ++K  +LLK L +
Sbjct: 373 VVVQLLLMVQSECTERAKKKAQKLLKLLRD 398

[Close]

BLAST of CmaCh09G006390.1 vs. TAIR10
Match: AT2G35930.1 (AT2G35930.1 plant U-box 23)

HSP 1 Score: 49.3 bits (116), Expect = 5.3e-06
Identity = 41/138 (29.71%), Postives = 67/138 (48.55%), Query Frame = 1


Query: 127 RLAALQLLERSL-VPDPSLDPDCTPELMRGIIANLN---TKTGSKPSTKILLALCLAESN 186
           R+ A  LL+  L V DP       PE+   ++  L+   ++  +K +  IL+ +C    N
Sbjct: 206 RVYATLLLKNILEVADPMQSMTLKPEVFTEVVQILDDRISQKATKAAMHILVNICPWGRN 265

Query: 187 RHIAVEAGAVGAVIESLPE----MEDPAAERALASLELMCTVPEGAAEVRAHALSVPAMV 246
           RH AVEAG +  +IE L +     E    E A+  L+L+C   EG AE   H  ++  + 
Sbjct: 266 RHKAVEAGVISVIIELLMDESFTSERRGPEMAMVVLDLLCQCAEGRAEFLNHGAAIAVVC 325

Query: 247 MMMGRMAARGKESAISVL 257
             + R++    + A+ VL
Sbjct: 326 KKILRVSQTASDRAVRVL 343

[Close]

BLAST of CmaCh09G006390.1 vs. NCBI nr
Match: gi|659132162|ref|XP_008466051.1| (PREDICTED: U-box domain-containing protein 26 [Cucumis melo])

HSP 1 Score: 506.5 bits (1303), Expect = 3.4e-140
Identity = 278/326 (85.28%), Postives = 294/326 (90.18%), Query Frame = 1


Query: 1   MKTHQPKLKTQLFSCGFFGHCTRSVLSPTASHSPSLPSLPSASDQPPPH----SRRPQLL 60
           M+THQPKLKTQLFSCGFF HCTRSVLSPTASHSP+LPSLPSASDQPPP     SRRP L 
Sbjct: 1   MRTHQPKLKTQLFSCGFFRHCTRSVLSPTASHSPALPSLPSASDQPPPPPPPPSRRPPLP 60

Query: 61  DSESSSSSASQSFTQWRFPLPHSPIFTQHPSIPDPPSTFSIPP----PPSISAATLKEIL 120
           DSESSSSSASQSFTQWRFPLPHSPIFTQ PSI DPPSTFSIPP    PP ISA+ L+EIL
Sbjct: 61  DSESSSSSASQSFTQWRFPLPHSPIFTQQPSISDPPSTFSIPPSDPLPPPISASALQEIL 120

Query: 121 HLAELQLCSASDSDRLAALQLLERSLVPDPSLDPDCTPELMRGIIANLNTKTGSKPSTKI 180
            +A+LQLCSASDSDRLAALQLLERSLVP+PSLD DCTPELMRG+I + N KTGSKP+TKI
Sbjct: 121 QVAQLQLCSASDSDRLAALQLLERSLVPNPSLDSDCTPELMRGLIESFNIKTGSKPATKI 180

Query: 181 LLALCLAESNRHIAVEAGAVGAVIESLPEMEDPAAERALASLELMCTVPEGAAEVRAHAL 240
           LLALCLAE NRH+AVEAGAVGAVIESLPEMED AAERALASLELMCTV EGAAEVRAHAL
Sbjct: 181 LLALCLAEGNRHVAVEAGAVGAVIESLPEMEDAAAERALASLELMCTVAEGAAEVRAHAL 240

Query: 241 SVPAMVMMMGRMAARGKESAISVLGVIFDNGVSPEAESAVTAPPEEVARAVVLALQGDSS 300
           SVPAMV MMGRMAARGKESAISVLGVI+DNGVS EA+SAVTAPPEEVARAVVLALQGDSS
Sbjct: 241 SVPAMVTMMGRMAARGKESAISVLGVIYDNGVSSEAKSAVTAPPEEVARAVVLALQGDSS 300

Query: 301 ARGRRKGARLLKALEEQQEGSSTAGV 319
            RGRRKGARLLK L+EQQ+   TA +
Sbjct: 301 VRGRRKGARLLKTLQEQQDEFFTAAL 326

[Close]

BLAST of CmaCh09G006390.1 vs. NCBI nr
Match: gi|449436874|ref|XP_004136217.1| (PREDICTED: U-box domain-containing protein 26 [Cucumis sativus])

HSP 1 Score: 501.5 bits (1290), Expect = 1.1e-138
Identity = 275/315 (87.30%), Postives = 288/315 (91.43%), Query Frame = 1


Query: 1   MKTHQPKLKTQLFSCGFFGHCTRSVLSPTASHSPSLPSLPSASDQPPPH-SRRPQLLDSE 60
           M+THQPKLKTQLFSCGFF HCTRSVLSPTASHSP+LPSLPSASDQPPP  SRRP L DSE
Sbjct: 1   MRTHQPKLKTQLFSCGFFRHCTRSVLSPTASHSPALPSLPSASDQPPPPPSRRPPLPDSE 60

Query: 61  SSSSSASQSFTQWRFPLPHSPIFTQHPSIPDPPSTFSIPPP----PSISAATLKEILHLA 120
           SSSSSASQSFTQWRFPLPHSPIFTQ PSI DPPSTFSIPPP    P ISA+ LKEIL +A
Sbjct: 61  SSSSSASQSFTQWRFPLPHSPIFTQQPSISDPPSTFSIPPPDPLPPPISASALKEILQVA 120

Query: 121 ELQLCSASDSDRLAALQLLERSLVPDPSLDPDCTPELMRGIIANLNTKTGSKPSTKILLA 180
           ELQL SASDSDRLAALQLLERSLVP+PSLD DCTPELMRG+I + N KTGSKP+TKILLA
Sbjct: 121 ELQLSSASDSDRLAALQLLERSLVPNPSLDSDCTPELMRGLIESFNIKTGSKPATKILLA 180

Query: 181 LCLAESNRHIAVEAGAVGAVIESLPEMEDPAAERALASLELMCTVPEGAAEVRAHALSVP 240
           LCLAE NRH+AVEAGAVGAVIESLPEMED AAERALASLELMCTV EGAAEVR+HALSVP
Sbjct: 181 LCLAEGNRHVAVEAGAVGAVIESLPEMEDAAAERALASLELMCTVAEGAAEVRSHALSVP 240

Query: 241 AMVMMMGRMAARGKESAISVLGVIFDNGVSPEAESAVTAPPEEVARAVVLALQGDSSARG 300
           AMV MMGRMAARGKESAISVLGVIFD+GVS EA+S VTAPPEEVARAVVLALQGDSS RG
Sbjct: 241 AMVTMMGRMAARGKESAISVLGVIFDSGVSSEAKSGVTAPPEEVARAVVLALQGDSSVRG 300

Query: 301 RRKGARLLKALEEQQ 311
           RRKGARLLK L+EQQ
Sbjct: 301 RRKGARLLKTLQEQQ 315

[Close]

BLAST of CmaCh09G006390.1 vs. NCBI nr
Match: gi|590573332|ref|XP_007012091.1| (ARM repeat superfamily protein, putative [Theobroma cacao])

HSP 1 Score: 345.9 bits (886), Expect = 7.7e-92
Identity = 207/344 (60.17%), Postives = 246/344 (71.51%), Query Frame = 1


Query: 1   MKTHQ--PKLKTQ---LFSCGFFGHCTRSVLSPTASHSPSLP---------------SLP 60
           MKTHQ  PKLKT    LFSCGFF +CT+S LSPT  HSPSLP               + P
Sbjct: 1   MKTHQHHPKLKTHPRPLFSCGFFRNCTQSTLSPTTPHSPSLPLSSSQPPPSSPPPSSTPP 60

Query: 61  SASDQPPPHSRRPQLL-------DSESSSSSASQSFTQWRFPLPHSPIFTQHPSIPDP-- 120
             S  PPP +R P+          S SSSSSAS SFTQW+FP+P SP+  QHPS P P  
Sbjct: 61  HPSPPPPPPARPPKNSFQQRPESSSSSSSSSASHSFTQWKFPIPTSPLH-QHPSQPTPHF 120

Query: 121 -PSTFSIPPPPSISAATLKEILHLAELQLCSASDSDRLAALQLLERSLVPDPSLDPDCTP 180
            P   S PPPP +S+A L+E+ H+AELQL + S S++LAALQLL+RSLVP+P  DP C P
Sbjct: 121 QPPPPSPPPPPPLSSANLQELFHIAELQLSTGSQSEQLAALQLLDRSLVPNPPSDPICPP 180

Query: 181 ELMRGIIANLNTKTGSKPSTKILLALCLAESNRHIAVEAGAVGAVIESLPEMEDPAAERA 240
           ELMRGI++NL    G KP+TKILLALCLAE NRH+AVEAGAVGAV+E + E+E  AAERA
Sbjct: 181 ELMRGIVSNLKNDAGVKPATKILLALCLAEGNRHVAVEAGAVGAVVEVVAELEGAAAERA 240

Query: 241 LASLELMCTVPEGAAEVRAHALSVPAMVMMMGRMAARGKESAISVLGVIFDNGV------ 300
           LA+LELMCTV EGAAEVRAHAL++PAMV +MGR+A RG+E AISV+ VI+  G       
Sbjct: 241 LAALELMCTVAEGAAEVRAHALAMPAMVSVMGRLAGRGREYAISVISVIYGGGCVGGGGG 300

Query: 301 SPEAESAVTAPPEEVARAVVLALQGDSSARGRRKGARLLKALEE 309
             + E  V APPEEVARAVVLALQG+ +ARGRRKGA+LL+ L+E
Sbjct: 301 EEQEEEMVPAPPEEVARAVVLALQGECTARGRRKGAQLLRTLQE 343

[Close]

BLAST of CmaCh09G006390.1 vs. NCBI nr
Match: gi|568844384|ref|XP_006476069.1| (PREDICTED: U-box domain-containing protein 26 [Citrus sinensis])

HSP 1 Score: 341.7 bits (875), Expect = 1.5e-90
Identity = 201/323 (62.23%), Postives = 233/323 (72.14%), Query Frame = 1


Query: 1   MKTHQPKLKTQ---LFSCGFFGHCTRSVLSPTASHSPSLPSLPSASDQPPPHSRRP---- 60
           MK+H PKLKTQ   LFSCGFF HCT+SVLSPT SHSP LP  P     PPP    P    
Sbjct: 1   MKSHHPKLKTQPRPLFSCGFFCHCTQSVLSPTNSHSPPLPLTPEEPPPPPPPPPPPPPPP 60

Query: 61  QLLDSESSSSSASQSFTQWRFPLPHSPIFTQHPSIPDP-PSTFSIPPPPSISAATLKEIL 120
              +S SSSSS SQSFTQW+FPLP SP+  +  + P P P     P PP I   +L+E+ 
Sbjct: 61  HQPESSSSSSSTSQSFTQWKFPLPTSPLHPRFRTDPKPEPDLPPKPLPPPIPFTSLQELF 120

Query: 121 HLAELQLCSASDSDRLAALQLLERSLVPDPSLDPDCTPELMRGIIANLNTKTGSKPSTKI 180
           HLAELQL S SDSDRLAAL LLERSL+P+P  D  C PELMRG++ NL  K G+KP+TKI
Sbjct: 121 HLAELQLSSGSDSDRLAALYLLERSLLPNPPSDQACQPELMRGVVGNLKNKAGAKPATKI 180

Query: 181 LLALCLAESNRHIAVEAGAVGAVIESLPEMEDPAAERALASLELMCTVPEGAAEVRAHAL 240
           LLALCLAESNR +AVEAGAVGAVIE + E++  A ERALA+LELMCTV EGA E RAHAL
Sbjct: 181 LLALCLAESNRRVAVEAGAVGAVIEVVAELDGAAGERALAALELMCTVAEGAEETRAHAL 240

Query: 241 SVPAMVMMMGRMAARGKESAISVLGVIFDNGVSPEAESAVTAPPEEVARAVVLALQGDSS 300
           +VP MV MMG+MA RGKE AISVL VI+  G     +  V APPEEVARAV LALQG+ +
Sbjct: 241 AVPVMVTMMGQMAGRGKEYAISVLAVIYGGG----DQLVVAAPPEEVARAVELALQGNCT 300

Query: 301 ARGRRKGARLLKALEEQQEGSST 316
            RGRRKG +LLK+L+E  +  +T
Sbjct: 301 PRGRRKGTQLLKSLKEYGQPDTT 319

[Close]

BLAST of CmaCh09G006390.1 vs. NCBI nr
Match: gi|470113282|ref|XP_004292853.1| (PREDICTED: E3 ubiquitin-protein ligase PUB23 [Fragaria vesca subsp. vesca])

HSP 1 Score: 340.9 bits (873), Expect = 2.5e-90
Identity = 202/333 (60.66%), Postives = 237/333 (71.17%), Query Frame = 1


Query: 1   MKTHQPKLKTQLFSCGFFGHCTRSVLSPTASHSPSLP-----------SLPSASDQPPPH 60
           MKT QPKLKTQLFSCGFFGHCT +VLSPT  H P LP           S P+A  QP P 
Sbjct: 1   MKTQQPKLKTQLFSCGFFGHCTGTVLSPTTPHPPPLPFSSTDPSPPSFSAPTAPTQPDPL 60

Query: 61  SRRPQLLDSESSSSSASQSFTQWRFPLP-HSPIFTQHPSIPDPP-----STF----SIPP 120
           +      DS SSSSS SQSFTQW+F LP  SPI + +P     P     +TF    + PP
Sbjct: 61  THHQSHPDSGSSSSSTSQSFTQWKFTLPSESPILSSYPQPGSDPDFDHVATFRSSPAPPP 120

Query: 121 PPSISAATLKEILHLAELQLCSASDSDRLAALQLLERSLVPDPSLDPDCTPELMRGIIAN 180
           PP +S+  L+E+ H AELQL + S  ++LAAL LLERSLVP P  DP+C PELMRG++  
Sbjct: 121 PPPMSSTGLQELFHAAELQLSTGSFPEQLAALHLLERSLVPYPPSDPECPPELMRGLVRI 180

Query: 181 LNTKTGSKPSTKILLALCLAESNRHIAVEAGAVGAVIESLPEMEDPAAERALASLELMCT 240
           L  K G+KP+TK+LLALCLAE NRH+AVEAGA  AV+E+  E+ED AAERALA+LELMCT
Sbjct: 181 LKNKAGAKPATKVLLALCLAEPNRHVAVEAGAASAVVETALELEDAAAERALAALELMCT 240

Query: 241 VPEGAAEVRAHALSVPAMVMMMGRMAARGKESAISVLGVIFDNGVSPEAESAVT-APPEE 300
           V EGAAEVR+HAL+VP MVMMMGR +ARGKE AI VL VI+      EA  AV+ AP EE
Sbjct: 241 VAEGAAEVRSHALAVPVMVMMMGRTSARGKEYAIGVLAVIYGGASEDEAAEAVSAAPAEE 300

Query: 301 VARAVVLALQGDSSARGRRKGARLLKALEEQQE 312
           VARAV LAL+GD S RGRRKGA+LLKAL  ++E
Sbjct: 301 VARAVELALKGDCSGRGRRKGAQLLKALRPEEE 333

The following BLAST results are available for this feature:

BLAST of CmaCh09G006390.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PUB26_ARATH	3.5e-12	31.43	U-box domain-containing protein 26 OS=Arabidopsis thaliana GN=PUB26 PE=2 SV=1	[more]
PUB25_ARATH	7.4e-10	34.00	U-box domain-containing protein 25 OS=Arabidopsis thaliana GN=PUB25 PE=2 SV=1	[more]

BLAST of CmaCh09G006390.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LEW4_CUCSA	7.7e-139	87.30	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G895740 PE=4 SV=1	[more]
A0A061GIN4_THECC	5.4e-92	60.17	ARM repeat superfamily protein, putative OS=Theobroma cacao GN=TCM_037166 PE=4 S...	[more]
V4UCX0_9ROSI	1.1e-89	61.92	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10008902mg PE=4 SV=1	[more]
B9RS36_RICCO	3.7e-85	57.06	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0802650 PE=4 SV=1	[more]
A0A067KDL2_JATCU	1.1e-84	56.98	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07768 PE=4 SV=1	[more]

BLAST of CmaCh09G006390.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G11550.1	2.5e-72	54.49	ARM repeat superfamily protein	[more]
AT1G49780.1	2.0e-13	31.43	plant U-box 26	[more]
AT3G19380.1	4.2e-11	34.00	plant U-box 25	[more]
AT2G35930.1	5.3e-06	29.71	plant U-box 23	[more]

BLAST of CmaCh09G006390.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659132162\|ref\|XP_008466051.1\|	3.4e-140	85.28	PREDICTED: U-box domain-containing protein 26 [Cucumis melo]	[more]
gi\|449436874\|ref\|XP_004136217.1\|	1.1e-138	87.30	PREDICTED: U-box domain-containing protein 26 [Cucumis sativus]	[more]
gi\|590573332\|ref\|XP_007012091.1\|	7.7e-92	60.17	ARM repeat superfamily protein, putative [Theobroma cacao]	[more]
gi\|568844384\|ref\|XP_006476069.1\|	1.5e-90	62.23	PREDICTED: U-box domain-containing protein 26 [Citrus sinensis]	[more]
gi\|470113282\|ref\|XP_004292853.1\|	2.5e-90	60.66	PREDICTED: E3 ubiquitin-protein ligase PUB23 [Fragaria vesca subsp. vesca]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR011989	ARM-like
IPR016024	ARM-type_fold

Vocabulary: **Molecular Function**
Term	Definition
GO:0005488	binding

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005488	binding

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmaCh09G006390	CmaCh09G006390	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmaCh09G006390.1	CmaCh09G006390.1-protein	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh09G006390.1.exon.1	CmaCh09G006390.1.exon.1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh09G006390.1.CDS.1	CmaCh09G006390.1.CDS.1	CDS

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011989	Armadillo-like helical	GENE3D	G3DSA:1.25.10.10		coord: 155..306 score: 2.
IPR016024	Armadillo-type fold	unknown	SSF48371	ARM repeat	coord: 117..265 score: 3.
None	No IPR available	PANTHER	PTHR22849	WDSAM1 PROTEIN	coord: 34..308 score: 1.0E
None	No IPR available	PANTHER	PTHR22849:SF35	SUBFAMILY NOT NAMED	coord: 34..308 score: 1.0E