CmaCh09G006390 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh09G006390
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	U-box domain-containing protein
Location	Cma_Chr09 : 3014929 .. 3015912 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAAACTCATCAACCAAAGCTCAAAACTCAGCTTTTCTCTTGCGGATTCTTCGGCCACTGTACTCGCTCCGTCCTCAGCCCCACCGCCTCTCATTCCCCTTCGCTCCCTTCCCTTCCCTCCGCCTCCGACCAACCCCCACCCCACTCCCGCCGTCCACAGCTTCTCGATTCCGAATCCTCCTCCTCCTCCGCCTCCCAAAGCTTCACCCAATGGAGATTCCCACTTCCACATTCACCAATTTTTACCCAACACCCTTCAATTCCAGACCCACCTTCTACTTTCTCCATTCCTCCGCCACCATCCATCTCCGCAGCAACCCTTAAAGAAATCCTCCACCTCGCAGAGCTCCAACTCTGCTCCGCCTCAGACTCCGACCGCCTCGCCGCTCTCCAACTCCTCGAACGCTCCTTGGTTCCCGACCCATCTCTAGACCCTGACTGCACTCCCGAACTCATGCGCGGCATAATCGCAAATTTGAACACCAAAACAGGTTCGAAACCATCCACCAAAATTTTGCTAGCCCTATGCTTGGCAGAGAGTAATCGTCACATTGCGGTGGAGGCAGGGGCGGTCGGCGCAGTGATAGAATCGCTGCCGGAGATGGAAGACCCCGCGGCAGAACGAGCACTCGCGTCGCTCGAACTTATGTGTACGGTGCCTGAGGGAGCGGCAGAGGTGAGGGCCCACGCGCTCTCTGTGCCAGCGATGGTGATGATGATGGGAAGAATGGCAGCCAGAGGGAAGGAGTCAGCCATAAGTGTGCTTGGAGTTATTTTCGACAATGGGGTCTCGCCGGAAGCCGAGTCCGCGGTAACAGCGCCGCCGGAGGAGGTGGCGCGTGCTGTCGTGTTGGCGCTGCAGGGAGATAGTAGTGCAAGGGGGAGGAGAAAAGGGGCGAGGCTTCTGAAGGCACTGGAAGAGCAGCAAGAGGGCTCCTCCACCGCAGGTGTAGATCCGGCGACGGTGGTCGGCCGGAGTTGA

mRNA sequence

ATGAAAACTCATCAACCAAAGCTCAAAACTCAGCTTTTCTCTTGCGGATTCTTCGGCCACTGTACTCGCTCCGTCCTCAGCCCCACCGCCTCTCATTCCCCTTCGCTCCCTTCCCTTCCCTCCGCCTCCGACCAACCCCCACCCCACTCCCGCCGTCCACAGCTTCTCGATTCCGAATCCTCCTCCTCCTCCGCCTCCCAAAGCTTCACCCAATGGAGATTCCCACTTCCACATTCACCAATTTTTACCCAACACCCTTCAATTCCAGACCCACCTTCTACTTTCTCCATTCCTCCGCCACCATCCATCTCCGCAGCAACCCTTAAAGAAATCCTCCACCTCGCAGAGCTCCAACTCTGCTCCGCCTCAGACTCCGACCGCCTCGCCGCTCTCCAACTCCTCGAACGCTCCTTGGTTCCCGACCCATCTCTAGACCCTGACTGCACTCCCGAACTCATGCGCGGCATAATCGCAAATTTGAACACCAAAACAGGTTCGAAACCATCCACCAAAATTTTGCTAGCCCTATGCTTGGCAGAGAGTAATCGTCACATTGCGGTGGAGGCAGGGGCGGTCGGCGCAGTGATAGAATCGCTGCCGGAGATGGAAGACCCCGCGGCAGAACGAGCACTCGCGTCGCTCGAACTTATGTGTACGGTGCCTGAGGGAGCGGCAGAGGTGAGGGCCCACGCGCTCTCTGTGCCAGCGATGGTGATGATGATGGGAAGAATGGCAGCCAGAGGGAAGGAGTCAGCCATAAGTGTGCTTGGAGTTATTTTCGACAATGGGGTCTCGCCGGAAGCCGAGTCCGCGGTAACAGCGCCGCCGGAGGAGGTGGCGCGTGCTGTCGTGTTGGCGCTGCAGGGAGATAGTAGTGCAAGGGGGAGGAGAAAAGGGGCGAGGCTTCTGAAGGCACTGGAAGAGCAGCAAGAGGGCTCCTCCACCGCAGGTGTAGATCCGGCGACGGTGGTCGGCCGGAGTTGA

Coding sequence (CDS)

ATGAAAACTCATCAACCAAAGCTCAAAACTCAGCTTTTCTCTTGCGGATTCTTCGGCCACTGTACTCGCTCCGTCCTCAGCCCCACCGCCTCTCATTCCCCTTCGCTCCCTTCCCTTCCCTCCGCCTCCGACCAACCCCCACCCCACTCCCGCCGTCCACAGCTTCTCGATTCCGAATCCTCCTCCTCCTCCGCCTCCCAAAGCTTCACCCAATGGAGATTCCCACTTCCACATTCACCAATTTTTACCCAACACCCTTCAATTCCAGACCCACCTTCTACTTTCTCCATTCCTCCGCCACCATCCATCTCCGCAGCAACCCTTAAAGAAATCCTCCACCTCGCAGAGCTCCAACTCTGCTCCGCCTCAGACTCCGACCGCCTCGCCGCTCTCCAACTCCTCGAACGCTCCTTGGTTCCCGACCCATCTCTAGACCCTGACTGCACTCCCGAACTCATGCGCGGCATAATCGCAAATTTGAACACCAAAACAGGTTCGAAACCATCCACCAAAATTTTGCTAGCCCTATGCTTGGCAGAGAGTAATCGTCACATTGCGGTGGAGGCAGGGGCGGTCGGCGCAGTGATAGAATCGCTGCCGGAGATGGAAGACCCCGCGGCAGAACGAGCACTCGCGTCGCTCGAACTTATGTGTACGGTGCCTGAGGGAGCGGCAGAGGTGAGGGCCCACGCGCTCTCTGTGCCAGCGATGGTGATGATGATGGGAAGAATGGCAGCCAGAGGGAAGGAGTCAGCCATAAGTGTGCTTGGAGTTATTTTCGACAATGGGGTCTCGCCGGAAGCCGAGTCCGCGGTAACAGCGCCGCCGGAGGAGGTGGCGCGTGCTGTCGTGTTGGCGCTGCAGGGAGATAGTAGTGCAAGGGGGAGGAGAAAAGGGGCGAGGCTTCTGAAGGCACTGGAAGAGCAGCAAGAGGGCTCCTCCACCGCAGGTGTAGATCCGGCGACGGTGGTCGGCCGGAGTTGA

Protein sequence

MKTHQPKLKTQLFSCGFFGHCTRSVLSPTASHSPSLPSLPSASDQPPPHSRRPQLLDSESSSSSASQSFTQWRFPLPHSPIFTQHPSIPDPPSTFSIPPPPSISAATLKEILHLAELQLCSASDSDRLAALQLLERSLVPDPSLDPDCTPELMRGIIANLNTKTGSKPSTKILLALCLAESNRHIAVEAGAVGAVIESLPEMEDPAAERALASLELMCTVPEGAAEVRAHALSVPAMVMMMGRMAARGKESAISVLGVIFDNGVSPEAESAVTAPPEEVARAVVLALQGDSSARGRRKGARLLKALEEQQEGSSTAGVDPATVVGRS

Homology

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BLAST of CmaCh09G006390 vs. Swiss-Prot
Match: PUB26_ARATH (U-box domain-containing protein 26 OS=Arabidopsis thaliana GN=PUB26 PE=2 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 3.5e-12
Identity = 66/210 (31.43%), Postives = 99/210 (47.14%), Query Frame = 1


Query: 119 LCSASDSDRLAALQLLERSLVPDPSLDPDC----TPELMRGIIANLNTKTGSKPSTKI-- 178
           L  +S   R+ A  L+E  L    S+D       +  +  G++  L     S+ + KI  
Sbjct: 206 LFDSSIEIRVNAAALIEMVLTGAKSMDLKLIISGSDSIFEGVLDLLKNPISSRRALKIGI 265

Query: 179 --LLALCLAESNRHIAVEAGAVGAVIESLPEMEDPA-AERALASLELMCTVPEGAAEVRA 238
             + ALCL +  RH+A+ AGA G +I+ L    D    ER LA++EL+C +PEG A    
Sbjct: 266 KAIFALCLVKQTRHLAISAGAPGILIDRLAADFDRCDTERGLATVELLCRLPEGCAAFGE 325

Query: 239 HALSVPAMVMMMGRMAARGKESAISVLGVIFDNGVSPEAESAVTAPPEEVARAVVLALQG 298
           HAL+VP MV  + R++ R  E A   L  +     + E      A    +   ++L +Q 
Sbjct: 326 HALTVPLMVKTILRVSDRATEYAAGALLAL----CTAEERCRDEAAAAGLVTQLLLLVQS 385

Query: 299 DSSARGRRKGARLLKALEEQQEGSSTAGVD 320
           D + R +RK   LLK L +     ST   D
Sbjct: 386 DCTERAKRKAQMLLKLLRDSWPDDSTVHSD 411

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BLAST of CmaCh09G006390 vs. Swiss-Prot
Match: PUB25_ARATH (U-box domain-containing protein 25 OS=Arabidopsis thaliana GN=PUB25 PE=2 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 7.4e-10
Identity = 51/150 (34.00%), Postives = 78/150 (52.00%), Query Frame = 1


Query: 160 LNTKTGSKPSTKILLALCLAESNRHIAVEAGAVGAVIESLPEMEDPA-AERALASLELMC 219
           ++++   K   K L ALC  +S RHIA+ AGA   +I+ L    D    ERALA++EL+C
Sbjct: 253 ISSRRALKIGIKTLFALCSVKSTRHIAITAGAPEILIDRLAADFDRCDTERALATVELLC 312

Query: 220 TVPEGAAEVRAHALSVPAMVMMMGRMAARGKESAISVLGVIFDNGVSPEAESAVTAPPEE 279
             PEG A    HAL+VP +V  + R++ R  E A   L  +     + E      A    
Sbjct: 313 RTPEGCAAFGEHALTVPLLVKTILRVSDRATEYAAGALLAL----CTAEERWREEAAGAG 372

Query: 280 VARAVVLALQGDSSARGRRKGARLLKALEE 309
           V   ++L +Q + + R ++K  +LLK L +
Sbjct: 373 VVVQLLLMVQSECTERAKKKAQKLLKLLRD 398

[Close]

BLAST of CmaCh09G006390 vs. TrEMBL
Match: A0A0A0LEW4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G895740 PE=4 SV=1)

HSP 1 Score: 501.5 bits (1290), Expect = 7.7e-139
Identity = 275/315 (87.30%), Postives = 288/315 (91.43%), Query Frame = 1


Query: 1   MKTHQPKLKTQLFSCGFFGHCTRSVLSPTASHSPSLPSLPSASDQPPPH-SRRPQLLDSE 60
           M+THQPKLKTQLFSCGFF HCTRSVLSPTASHSP+LPSLPSASDQPPP  SRRP L DSE
Sbjct: 1   MRTHQPKLKTQLFSCGFFRHCTRSVLSPTASHSPALPSLPSASDQPPPPPSRRPPLPDSE 60

Query: 61  SSSSSASQSFTQWRFPLPHSPIFTQHPSIPDPPSTFSIPPP----PSISAATLKEILHLA 120
           SSSSSASQSFTQWRFPLPHSPIFTQ PSI DPPSTFSIPPP    P ISA+ LKEIL +A
Sbjct: 61  SSSSSASQSFTQWRFPLPHSPIFTQQPSISDPPSTFSIPPPDPLPPPISASALKEILQVA 120

Query: 121 ELQLCSASDSDRLAALQLLERSLVPDPSLDPDCTPELMRGIIANLNTKTGSKPSTKILLA 180
           ELQL SASDSDRLAALQLLERSLVP+PSLD DCTPELMRG+I + N KTGSKP+TKILLA
Sbjct: 121 ELQLSSASDSDRLAALQLLERSLVPNPSLDSDCTPELMRGLIESFNIKTGSKPATKILLA 180

Query: 181 LCLAESNRHIAVEAGAVGAVIESLPEMEDPAAERALASLELMCTVPEGAAEVRAHALSVP 240
           LCLAE NRH+AVEAGAVGAVIESLPEMED AAERALASLELMCTV EGAAEVR+HALSVP
Sbjct: 181 LCLAEGNRHVAVEAGAVGAVIESLPEMEDAAAERALASLELMCTVAEGAAEVRSHALSVP 240

Query: 241 AMVMMMGRMAARGKESAISVLGVIFDNGVSPEAESAVTAPPEEVARAVVLALQGDSSARG 300
           AMV MMGRMAARGKESAISVLGVIFD+GVS EA+S VTAPPEEVARAVVLALQGDSS RG
Sbjct: 241 AMVTMMGRMAARGKESAISVLGVIFDSGVSSEAKSGVTAPPEEVARAVVLALQGDSSVRG 300

Query: 301 RRKGARLLKALEEQQ 311
           RRKGARLLK L+EQQ
Sbjct: 301 RRKGARLLKTLQEQQ 315

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BLAST of CmaCh09G006390 vs. TrEMBL
Match: A0A061GIN4_THECC (ARM repeat superfamily protein, putative OS=Theobroma cacao GN=TCM_037166 PE=4 SV=1)

HSP 1 Score: 345.9 bits (886), Expect = 5.4e-92
Identity = 207/344 (60.17%), Postives = 246/344 (71.51%), Query Frame = 1


Query: 1   MKTHQ--PKLKTQ---LFSCGFFGHCTRSVLSPTASHSPSLP---------------SLP 60
           MKTHQ  PKLKT    LFSCGFF +CT+S LSPT  HSPSLP               + P
Sbjct: 1   MKTHQHHPKLKTHPRPLFSCGFFRNCTQSTLSPTTPHSPSLPLSSSQPPPSSPPPSSTPP 60

Query: 61  SASDQPPPHSRRPQLL-------DSESSSSSASQSFTQWRFPLPHSPIFTQHPSIPDP-- 120
             S  PPP +R P+          S SSSSSAS SFTQW+FP+P SP+  QHPS P P  
Sbjct: 61  HPSPPPPPPARPPKNSFQQRPESSSSSSSSSASHSFTQWKFPIPTSPLH-QHPSQPTPHF 120

Query: 121 -PSTFSIPPPPSISAATLKEILHLAELQLCSASDSDRLAALQLLERSLVPDPSLDPDCTP 180
            P   S PPPP +S+A L+E+ H+AELQL + S S++LAALQLL+RSLVP+P  DP C P
Sbjct: 121 QPPPPSPPPPPPLSSANLQELFHIAELQLSTGSQSEQLAALQLLDRSLVPNPPSDPICPP 180

Query: 181 ELMRGIIANLNTKTGSKPSTKILLALCLAESNRHIAVEAGAVGAVIESLPEMEDPAAERA 240
           ELMRGI++NL    G KP+TKILLALCLAE NRH+AVEAGAVGAV+E + E+E  AAERA
Sbjct: 181 ELMRGIVSNLKNDAGVKPATKILLALCLAEGNRHVAVEAGAVGAVVEVVAELEGAAAERA 240

Query: 241 LASLELMCTVPEGAAEVRAHALSVPAMVMMMGRMAARGKESAISVLGVIFDNGV------ 300
           LA+LELMCTV EGAAEVRAHAL++PAMV +MGR+A RG+E AISV+ VI+  G       
Sbjct: 241 LAALELMCTVAEGAAEVRAHALAMPAMVSVMGRLAGRGREYAISVISVIYGGGCVGGGGG 300

Query: 301 SPEAESAVTAPPEEVARAVVLALQGDSSARGRRKGARLLKALEE 309
             + E  V APPEEVARAVVLALQG+ +ARGRRKGA+LL+ L+E
Sbjct: 301 EEQEEEMVPAPPEEVARAVVLALQGECTARGRRKGAQLLRTLQE 343

[Close]

BLAST of CmaCh09G006390 vs. TrEMBL
Match: V4UCX0_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10008902mg PE=4 SV=1)

HSP 1 Score: 338.2 bits (866), Expect = 1.1e-89
Identity = 200/323 (61.92%), Postives = 232/323 (71.83%), Query Frame = 1


Query: 1   MKTHQPKLKTQ---LFSCGFFGHCTRSVLSPTASHSPSLPSLPSASDQPPPHSRRP---- 60
           MK+H PKLKTQ   LFSCGFF HCT+SVLSPT SHSP LP  P     PPP    P    
Sbjct: 1   MKSHHPKLKTQPRPLFSCGFFCHCTQSVLSPTNSHSPPLPLTPEEPPPPPPPPPPPPPPP 60

Query: 61  QLLDSESSSSSASQSFTQWRFPLPHSPIFTQHPSIPDP-PSTFSIPPPPSISAATLKEIL 120
              +S SSSSS SQSFTQW+FPLP SP+  +  + P P P     P PP I   +L+E+ 
Sbjct: 61  HQPESSSSSSSTSQSFTQWKFPLPTSPLHPRFRTDPKPEPDLPPKPLPPPIPFTSLQELF 120

Query: 121 HLAELQLCSASDSDRLAALQLLERSLVPDPSLDPDCTPELMRGIIANLNTKTGSKPSTKI 180
            LAELQL S SDSDRLAAL LLERSL+P+P  D  C PELMRG++ NL  K G+KP+TKI
Sbjct: 121 LLAELQLSSGSDSDRLAALYLLERSLLPNPPSDQACQPELMRGVVGNLKNKAGAKPATKI 180

Query: 181 LLALCLAESNRHIAVEAGAVGAVIESLPEMEDPAAERALASLELMCTVPEGAAEVRAHAL 240
           LLALCLAESNR +AVEAGAVGAVIE + E++  A ERALA+LELMCTV EGA E RAHAL
Sbjct: 181 LLALCLAESNRRVAVEAGAVGAVIEVVAELDAAAGERALAALELMCTVAEGAEETRAHAL 240

Query: 241 SVPAMVMMMGRMAARGKESAISVLGVIFDNGVSPEAESAVTAPPEEVARAVVLALQGDSS 300
           +VP MV MMG+MA RGKE AISVL VI+  G  P     + APPEEVARAV LALQG+ +
Sbjct: 241 AVPVMVTMMGQMAGRGKEYAISVLAVIYGGGDQP----VLAAPPEEVARAVELALQGNCT 300

Query: 301 ARGRRKGARLLKALEEQQEGSST 316
            RGRRKG +LLK+L+E  +  +T
Sbjct: 301 PRGRRKGTQLLKSLKEYGQPDTT 319

[Close]

BLAST of CmaCh09G006390 vs. TrEMBL
Match: B9RS36_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0802650 PE=4 SV=1)

HSP 1 Score: 323.2 bits (827), Expect = 3.7e-85
Identity = 194/340 (57.06%), Postives = 236/340 (69.41%), Query Frame = 1


Query: 1   MKTHQPKLKTQ---LFSCGFFGHCTRSVLSPTASHSPSLP-------SLPSASDQPPP-- 60
           MKTH PKLKTQ    FSCGFF HCT++ LSPT  H PSLP        LP +   PPP  
Sbjct: 1   MKTHHPKLKTQPRPFFSCGFFRHCTQTTLSPTTPHPPSLPLCSTAPPPLPPSPPPPPPPP 60

Query: 61  ----HSRRPQLLDSE-------SSSSSASQSFTQWRFPLPHSPIFTQHPSIPDPPSTFSI 120
                S++P LL S+       SSSS+ SQSFTQW+FPL  SP+  +      P ST  +
Sbjct: 61  PPPLQSQQPLLLKSQQPESSSSSSSSTTSQSFTQWKFPLVTSPLHPESDPQTKPDSTIPL 120

Query: 121 PPPPSISAATLKEILHLAELQLCSASDSDRLAALQLLERSLVPDPSLDPDCTPELMRGII 180
           PPP  I++  L+E+ H AELQL   S+ ++LA+L LLERSLVP+P     C P+LMR ++
Sbjct: 121 PPP--INSTKLQEVFHAAELQLSGGSEHEKLASLHLLERSLVPNPPSHSVCPPQLMRALV 180

Query: 181 ANLNTKTGSKPSTKILLALCLAESNRHIAVEAGAVGAVIESLPEMEDPAAERALASLELM 240
           ANL  K G+KP+TKILLALCLAE+NRH+AVEAGAVG +IE + E+E PAAERALA+LEL 
Sbjct: 181 ANLKNKAGAKPATKILLALCLAEANRHVAVEAGAVGTIIEVVMELEAPAAERALAALELT 240

Query: 241 CTVPEGAAEVRAHALSVPAMVMMMGRMAARGKESAISVLGVIFDNG--------VSPEAE 300
           CTV EGAAE+R HAL+VP MV MMG+++ RGKE AIS L V++  G        V+ + E
Sbjct: 241 CTVEEGAAELRTHALAVPVMVAMMGKVSGRGKEYAISALAVVYGGGGGEGGGGLVAVDEE 300

Query: 301 SAVT-APPEEVARAVVLALQGDSSARGRRKGARLLKALEE 309
             V  APPEEVARAVVLALQGD +ARGRRKG +LLKALEE
Sbjct: 301 VQVQHAPPEEVARAVVLALQGDCTARGRRKGHQLLKALEE 338

[Close]

BLAST of CmaCh09G006390 vs. TrEMBL
Match: A0A067KDL2_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07768 PE=4 SV=1)

HSP 1 Score: 321.6 bits (823), Expect = 1.1e-84
Identity = 196/344 (56.98%), Postives = 232/344 (67.44%), Query Frame = 1


Query: 1   MKTHQPKLKTQ---LFSCGFFGHCTRSVLSPTASHSPSLPS---LPSASDQPP------- 60
           M+TH+PKLKTQ    FSCGFF HCT++ LSPT  HSPSLP+   LPS+   PP       
Sbjct: 1   MRTHRPKLKTQSRPFFSCGFFRHCTQTALSPTTPHSPSLPTSQPLPSSLPPPPLPSPPPP 60

Query: 61  -----------PHSRRPQLLDSESSSSSASQSFTQWRFPLPHSPIFTQHPSIP-DPPSTF 120
                      P SR P    S SSSSS SQSFTQWRFPL +SP+    P+     P T 
Sbjct: 61  PVLPPQPQPQTPLSRAPPAESSSSSSSSTSQSFTQWRFPLVNSPLHQHSPAETITQPKTD 120

Query: 121 S----IPPPPSISAATLKEILHLAELQLCSASDSDRLAALQLLERSLVPDPSLDPDCTPE 180
           S    +P PP I +  L+E+   AELQL + S+S++LAAL LLERSLVP+P  DP C  E
Sbjct: 121 SPRALVPLPPPIHSDELQELFREAELQLSTGSESEKLAALHLLERSLVPNPPSDPVCPLE 180

Query: 181 LMRGIIANLNTKTGSKPSTKILLALCLAESNRHIAVEAGAVGAVIESLPEMEDPAAERAL 240
           LMRG++ NL  K G+K +TKILLALCLAE NRH+AV+AG VG V+E   E+E P AERAL
Sbjct: 181 LMRGVVVNLKNKAGAKAATKILLALCLAEGNRHVAVKAGTVGTVVEVTMELEGPVAERAL 240

Query: 241 ASLELMCTVPEGAAEVRAHALSVPAMVMMMGRMAARGKESAISVLGVIFDNGVSPEAESA 300
           A+LELMCTV EGAAE+RAHAL++P MV  MG M  RGKE AIS L V++  GV    E  
Sbjct: 241 AALELMCTVEEGAAELRAHALAMPVMVAKMGEMEGRGKEYAISALSVVYGGGVLD--EQV 300

Query: 301 VTAPPEEVARAVVLALQGDSSARGRRKGARLLKALEEQQEGSST 316
             APPEEVARAV+LALQGD +AR RRKGA+LLKAL+E     ST
Sbjct: 301 HQAPPEEVARAVILALQGDCTARARRKGAQLLKALQEFGRADST 342

[Close]

BLAST of CmaCh09G006390 vs. TAIR10
Match: AT5G11550.1 (AT5G11550.1 ARM repeat superfamily protein)

HSP 1 Score: 269.6 bits (688), Expect = 2.5e-72
Identity = 170/312 (54.49%), Postives = 200/312 (64.10%), Query Frame = 1


Query: 2   KTHQPKLKTQLFSCGFFGHCTRSVLSPTASHSPSLPSLPSASDQPPPHSRRPQLLDSESS 61
           K H P     LFSCGFF  CT+SVLSPT+ H            Q P          S SS
Sbjct: 9   KPHAPP--RPLFSCGFFRRCTQSVLSPTSPHQ-----------QQPRRKATTTSSSSSSS 68

Query: 62  SSSASQSFTQWRFPLPHSPIFTQHPSIPDPPSTFSIPPPPSISAATLKEILHLAELQLCS 121
           S+S SQSFTQWRFP  H     Q PS   PP     PPPP     TL+E   +AEL L S
Sbjct: 69  STSTSQSFTQWRFP--HH--LDQTPSTAPPPPHPPPPPPPLPVTTTLQETFQIAELHLTS 128

Query: 122 ASDSDRLAALQLLERSLVPDPSLDPDCTPELMRGIIANL---NTKTGSKPSTKILLALCL 181
            S+SD+L ALQLLER +VPDP  DP C P LMRG+++ L   N    +K  TKILLALCL
Sbjct: 129 VSESDKLLALQLLERVVVPDPPSDPTCPPGLMRGLVSCLRSNNKIVTAKYVTKILLALCL 188

Query: 182 AESNRHIAVEAGAVGAVIESLPEMEDPAAERALASLELMCTVPEGAAEVRAHALSVPAMV 241
           AE NRH+AVEAGA  AV+E+   +E  A ERALA+LELMCT  EGAAEVRAHA++VPAMV
Sbjct: 189 AEGNRHVAVEAGAARAVVETAAGLEISAVERALAALELMCTTAEGAAEVRAHAMTVPAMV 248

Query: 242 MMMGRMAARGKESAISVLGVIFDNG--VSPEAESAVTAPPEEVARAVVLALQGDSSARGR 301
            +M R+A RG+E AIS+L V++  G       E    AP EEVARAV LAL+G+ +ARG+
Sbjct: 249 AVMARLAGRGREYAISILSVVYGKGGEGGDSGEEIAVAPAEEVARAVALALEGECTARGK 303

Query: 302 RKGARLLKALEE 309
           RKGA+LLK LEE
Sbjct: 309 RKGAQLLKTLEE 303

[Close]

BLAST of CmaCh09G006390 vs. TAIR10
Match: AT1G49780.1 (AT1G49780.1 plant U-box 26)

HSP 1 Score: 73.9 bits (180), Expect = 2.0e-13
Identity = 66/210 (31.43%), Postives = 99/210 (47.14%), Query Frame = 1


Query: 119 LCSASDSDRLAALQLLERSLVPDPSLDPDC----TPELMRGIIANLNTKTGSKPSTKI-- 178
           L  +S   R+ A  L+E  L    S+D       +  +  G++  L     S+ + KI  
Sbjct: 206 LFDSSIEIRVNAAALIEMVLTGAKSMDLKLIISGSDSIFEGVLDLLKNPISSRRALKIGI 265

Query: 179 --LLALCLAESNRHIAVEAGAVGAVIESLPEMEDPA-AERALASLELMCTVPEGAAEVRA 238
             + ALCL +  RH+A+ AGA G +I+ L    D    ER LA++EL+C +PEG A    
Sbjct: 266 KAIFALCLVKQTRHLAISAGAPGILIDRLAADFDRCDTERGLATVELLCRLPEGCAAFGE 325

Query: 239 HALSVPAMVMMMGRMAARGKESAISVLGVIFDNGVSPEAESAVTAPPEEVARAVVLALQG 298
           HAL+VP MV  + R++ R  E A   L  +     + E      A    +   ++L +Q 
Sbjct: 326 HALTVPLMVKTILRVSDRATEYAAGALLAL----CTAEERCRDEAAAAGLVTQLLLLVQS 385

Query: 299 DSSARGRRKGARLLKALEEQQEGSSTAGVD 320
           D + R +RK   LLK L +     ST   D
Sbjct: 386 DCTERAKRKAQMLLKLLRDSWPDDSTVHSD 411

[Close]

BLAST of CmaCh09G006390 vs. TAIR10
Match: AT3G19380.1 (AT3G19380.1 plant U-box 25)

HSP 1 Score: 66.2 bits (160), Expect = 4.2e-11
Identity = 51/150 (34.00%), Postives = 78/150 (52.00%), Query Frame = 1


Query: 160 LNTKTGSKPSTKILLALCLAESNRHIAVEAGAVGAVIESLPEMEDPA-AERALASLELMC 219
           ++++   K   K L ALC  +S RHIA+ AGA   +I+ L    D    ERALA++EL+C
Sbjct: 253 ISSRRALKIGIKTLFALCSVKSTRHIAITAGAPEILIDRLAADFDRCDTERALATVELLC 312

Query: 220 TVPEGAAEVRAHALSVPAMVMMMGRMAARGKESAISVLGVIFDNGVSPEAESAVTAPPEE 279
             PEG A    HAL+VP +V  + R++ R  E A   L  +     + E      A    
Sbjct: 313 RTPEGCAAFGEHALTVPLLVKTILRVSDRATEYAAGALLAL----CTAEERWREEAAGAG 372

Query: 280 VARAVVLALQGDSSARGRRKGARLLKALEE 309
           V   ++L +Q + + R ++K  +LLK L +
Sbjct: 373 VVVQLLLMVQSECTERAKKKAQKLLKLLRD 398

[Close]

BLAST of CmaCh09G006390 vs. TAIR10
Match: AT2G35930.1 (AT2G35930.1 plant U-box 23)

HSP 1 Score: 49.3 bits (116), Expect = 5.3e-06
Identity = 41/138 (29.71%), Postives = 67/138 (48.55%), Query Frame = 1


Query: 127 RLAALQLLERSL-VPDPSLDPDCTPELMRGIIANLN---TKTGSKPSTKILLALCLAESN 186
           R+ A  LL+  L V DP       PE+   ++  L+   ++  +K +  IL+ +C    N
Sbjct: 206 RVYATLLLKNILEVADPMQSMTLKPEVFTEVVQILDDRISQKATKAAMHILVNICPWGRN 265

Query: 187 RHIAVEAGAVGAVIESLPE----MEDPAAERALASLELMCTVPEGAAEVRAHALSVPAMV 246
           RH AVEAG +  +IE L +     E    E A+  L+L+C   EG AE   H  ++  + 
Sbjct: 266 RHKAVEAGVISVIIELLMDESFTSERRGPEMAMVVLDLLCQCAEGRAEFLNHGAAIAVVC 325

Query: 247 MMMGRMAARGKESAISVL 257
             + R++    + A+ VL
Sbjct: 326 KKILRVSQTASDRAVRVL 343

[Close]

BLAST of CmaCh09G006390 vs. NCBI nr
Match: gi|659132162|ref|XP_008466051.1| (PREDICTED: U-box domain-containing protein 26 [Cucumis melo])

HSP 1 Score: 506.5 bits (1303), Expect = 3.4e-140
Identity = 278/326 (85.28%), Postives = 294/326 (90.18%), Query Frame = 1


Query: 1   MKTHQPKLKTQLFSCGFFGHCTRSVLSPTASHSPSLPSLPSASDQPPPH----SRRPQLL 60
           M+THQPKLKTQLFSCGFF HCTRSVLSPTASHSP+LPSLPSASDQPPP     SRRP L 
Sbjct: 1   MRTHQPKLKTQLFSCGFFRHCTRSVLSPTASHSPALPSLPSASDQPPPPPPPPSRRPPLP 60

Query: 61  DSESSSSSASQSFTQWRFPLPHSPIFTQHPSIPDPPSTFSIPP----PPSISAATLKEIL 120
           DSESSSSSASQSFTQWRFPLPHSPIFTQ PSI DPPSTFSIPP    PP ISA+ L+EIL
Sbjct: 61  DSESSSSSASQSFTQWRFPLPHSPIFTQQPSISDPPSTFSIPPSDPLPPPISASALQEIL 120

Query: 121 HLAELQLCSASDSDRLAALQLLERSLVPDPSLDPDCTPELMRGIIANLNTKTGSKPSTKI 180
            +A+LQLCSASDSDRLAALQLLERSLVP+PSLD DCTPELMRG+I + N KTGSKP+TKI
Sbjct: 121 QVAQLQLCSASDSDRLAALQLLERSLVPNPSLDSDCTPELMRGLIESFNIKTGSKPATKI 180

Query: 181 LLALCLAESNRHIAVEAGAVGAVIESLPEMEDPAAERALASLELMCTVPEGAAEVRAHAL 240
           LLALCLAE NRH+AVEAGAVGAVIESLPEMED AAERALASLELMCTV EGAAEVRAHAL
Sbjct: 181 LLALCLAEGNRHVAVEAGAVGAVIESLPEMEDAAAERALASLELMCTVAEGAAEVRAHAL 240

Query: 241 SVPAMVMMMGRMAARGKESAISVLGVIFDNGVSPEAESAVTAPPEEVARAVVLALQGDSS 300
           SVPAMV MMGRMAARGKESAISVLGVI+DNGVS EA+SAVTAPPEEVARAVVLALQGDSS
Sbjct: 241 SVPAMVTMMGRMAARGKESAISVLGVIYDNGVSSEAKSAVTAPPEEVARAVVLALQGDSS 300

Query: 301 ARGRRKGARLLKALEEQQEGSSTAGV 319
            RGRRKGARLLK L+EQQ+   TA +
Sbjct: 301 VRGRRKGARLLKTLQEQQDEFFTAAL 326

[Close]

BLAST of CmaCh09G006390 vs. NCBI nr
Match: gi|449436874|ref|XP_004136217.1| (PREDICTED: U-box domain-containing protein 26 [Cucumis sativus])

HSP 1 Score: 501.5 bits (1290), Expect = 1.1e-138
Identity = 275/315 (87.30%), Postives = 288/315 (91.43%), Query Frame = 1


Query: 1   MKTHQPKLKTQLFSCGFFGHCTRSVLSPTASHSPSLPSLPSASDQPPPH-SRRPQLLDSE 60
           M+THQPKLKTQLFSCGFF HCTRSVLSPTASHSP+LPSLPSASDQPPP  SRRP L DSE
Sbjct: 1   MRTHQPKLKTQLFSCGFFRHCTRSVLSPTASHSPALPSLPSASDQPPPPPSRRPPLPDSE 60

Query: 61  SSSSSASQSFTQWRFPLPHSPIFTQHPSIPDPPSTFSIPPP----PSISAATLKEILHLA 120
           SSSSSASQSFTQWRFPLPHSPIFTQ PSI DPPSTFSIPPP    P ISA+ LKEIL +A
Sbjct: 61  SSSSSASQSFTQWRFPLPHSPIFTQQPSISDPPSTFSIPPPDPLPPPISASALKEILQVA 120

Query: 121 ELQLCSASDSDRLAALQLLERSLVPDPSLDPDCTPELMRGIIANLNTKTGSKPSTKILLA 180
           ELQL SASDSDRLAALQLLERSLVP+PSLD DCTPELMRG+I + N KTGSKP+TKILLA
Sbjct: 121 ELQLSSASDSDRLAALQLLERSLVPNPSLDSDCTPELMRGLIESFNIKTGSKPATKILLA 180

Query: 181 LCLAESNRHIAVEAGAVGAVIESLPEMEDPAAERALASLELMCTVPEGAAEVRAHALSVP 240
           LCLAE NRH+AVEAGAVGAVIESLPEMED AAERALASLELMCTV EGAAEVR+HALSVP
Sbjct: 181 LCLAEGNRHVAVEAGAVGAVIESLPEMEDAAAERALASLELMCTVAEGAAEVRSHALSVP 240

Query: 241 AMVMMMGRMAARGKESAISVLGVIFDNGVSPEAESAVTAPPEEVARAVVLALQGDSSARG 300
           AMV MMGRMAARGKESAISVLGVIFD+GVS EA+S VTAPPEEVARAVVLALQGDSS RG
Sbjct: 241 AMVTMMGRMAARGKESAISVLGVIFDSGVSSEAKSGVTAPPEEVARAVVLALQGDSSVRG 300

Query: 301 RRKGARLLKALEEQQ 311
           RRKGARLLK L+EQQ
Sbjct: 301 RRKGARLLKTLQEQQ 315

[Close]

BLAST of CmaCh09G006390 vs. NCBI nr
Match: gi|590573332|ref|XP_007012091.1| (ARM repeat superfamily protein, putative [Theobroma cacao])

HSP 1 Score: 345.9 bits (886), Expect = 7.7e-92
Identity = 207/344 (60.17%), Postives = 246/344 (71.51%), Query Frame = 1


Query: 1   MKTHQ--PKLKTQ---LFSCGFFGHCTRSVLSPTASHSPSLP---------------SLP 60
           MKTHQ  PKLKT    LFSCGFF +CT+S LSPT  HSPSLP               + P
Sbjct: 1   MKTHQHHPKLKTHPRPLFSCGFFRNCTQSTLSPTTPHSPSLPLSSSQPPPSSPPPSSTPP 60

Query: 61  SASDQPPPHSRRPQLL-------DSESSSSSASQSFTQWRFPLPHSPIFTQHPSIPDP-- 120
             S  PPP +R P+          S SSSSSAS SFTQW+FP+P SP+  QHPS P P  
Sbjct: 61  HPSPPPPPPARPPKNSFQQRPESSSSSSSSSASHSFTQWKFPIPTSPLH-QHPSQPTPHF 120

Query: 121 -PSTFSIPPPPSISAATLKEILHLAELQLCSASDSDRLAALQLLERSLVPDPSLDPDCTP 180
            P   S PPPP +S+A L+E+ H+AELQL + S S++LAALQLL+RSLVP+P  DP C P
Sbjct: 121 QPPPPSPPPPPPLSSANLQELFHIAELQLSTGSQSEQLAALQLLDRSLVPNPPSDPICPP 180

Query: 181 ELMRGIIANLNTKTGSKPSTKILLALCLAESNRHIAVEAGAVGAVIESLPEMEDPAAERA 240
           ELMRGI++NL    G KP+TKILLALCLAE NRH+AVEAGAVGAV+E + E+E  AAERA
Sbjct: 181 ELMRGIVSNLKNDAGVKPATKILLALCLAEGNRHVAVEAGAVGAVVEVVAELEGAAAERA 240

Query: 241 LASLELMCTVPEGAAEVRAHALSVPAMVMMMGRMAARGKESAISVLGVIFDNGV------ 300
           LA+LELMCTV EGAAEVRAHAL++PAMV +MGR+A RG+E AISV+ VI+  G       
Sbjct: 241 LAALELMCTVAEGAAEVRAHALAMPAMVSVMGRLAGRGREYAISVISVIYGGGCVGGGGG 300

Query: 301 SPEAESAVTAPPEEVARAVVLALQGDSSARGRRKGARLLKALEE 309
             + E  V APPEEVARAVVLALQG+ +ARGRRKGA+LL+ L+E
Sbjct: 301 EEQEEEMVPAPPEEVARAVVLALQGECTARGRRKGAQLLRTLQE 343

[Close]

BLAST of CmaCh09G006390 vs. NCBI nr
Match: gi|568844384|ref|XP_006476069.1| (PREDICTED: U-box domain-containing protein 26 [Citrus sinensis])

HSP 1 Score: 341.7 bits (875), Expect = 1.5e-90
Identity = 201/323 (62.23%), Postives = 233/323 (72.14%), Query Frame = 1


Query: 1   MKTHQPKLKTQ---LFSCGFFGHCTRSVLSPTASHSPSLPSLPSASDQPPPHSRRP---- 60
           MK+H PKLKTQ   LFSCGFF HCT+SVLSPT SHSP LP  P     PPP    P    
Sbjct: 1   MKSHHPKLKTQPRPLFSCGFFCHCTQSVLSPTNSHSPPLPLTPEEPPPPPPPPPPPPPPP 60

Query: 61  QLLDSESSSSSASQSFTQWRFPLPHSPIFTQHPSIPDP-PSTFSIPPPPSISAATLKEIL 120
              +S SSSSS SQSFTQW+FPLP SP+  +  + P P P     P PP I   +L+E+ 
Sbjct: 61  HQPESSSSSSSTSQSFTQWKFPLPTSPLHPRFRTDPKPEPDLPPKPLPPPIPFTSLQELF 120

Query: 121 HLAELQLCSASDSDRLAALQLLERSLVPDPSLDPDCTPELMRGIIANLNTKTGSKPSTKI 180
           HLAELQL S SDSDRLAAL LLERSL+P+P  D  C PELMRG++ NL  K G+KP+TKI
Sbjct: 121 HLAELQLSSGSDSDRLAALYLLERSLLPNPPSDQACQPELMRGVVGNLKNKAGAKPATKI 180

Query: 181 LLALCLAESNRHIAVEAGAVGAVIESLPEMEDPAAERALASLELMCTVPEGAAEVRAHAL 240
           LLALCLAESNR +AVEAGAVGAVIE + E++  A ERALA+LELMCTV EGA E RAHAL
Sbjct: 181 LLALCLAESNRRVAVEAGAVGAVIEVVAELDGAAGERALAALELMCTVAEGAEETRAHAL 240

Query: 241 SVPAMVMMMGRMAARGKESAISVLGVIFDNGVSPEAESAVTAPPEEVARAVVLALQGDSS 300
           +VP MV MMG+MA RGKE AISVL VI+  G     +  V APPEEVARAV LALQG+ +
Sbjct: 241 AVPVMVTMMGQMAGRGKEYAISVLAVIYGGG----DQLVVAAPPEEVARAVELALQGNCT 300

Query: 301 ARGRRKGARLLKALEEQQEGSST 316
            RGRRKG +LLK+L+E  +  +T
Sbjct: 301 PRGRRKGTQLLKSLKEYGQPDTT 319

[Close]

BLAST of CmaCh09G006390 vs. NCBI nr
Match: gi|470113282|ref|XP_004292853.1| (PREDICTED: E3 ubiquitin-protein ligase PUB23 [Fragaria vesca subsp. vesca])

HSP 1 Score: 340.9 bits (873), Expect = 2.5e-90
Identity = 202/333 (60.66%), Postives = 237/333 (71.17%), Query Frame = 1


Query: 1   MKTHQPKLKTQLFSCGFFGHCTRSVLSPTASHSPSLP-----------SLPSASDQPPPH 60
           MKT QPKLKTQLFSCGFFGHCT +VLSPT  H P LP           S P+A  QP P 
Sbjct: 1   MKTQQPKLKTQLFSCGFFGHCTGTVLSPTTPHPPPLPFSSTDPSPPSFSAPTAPTQPDPL 60

Query: 61  SRRPQLLDSESSSSSASQSFTQWRFPLP-HSPIFTQHPSIPDPP-----STF----SIPP 120
           +      DS SSSSS SQSFTQW+F LP  SPI + +P     P     +TF    + PP
Sbjct: 61  THHQSHPDSGSSSSSTSQSFTQWKFTLPSESPILSSYPQPGSDPDFDHVATFRSSPAPPP 120

Query: 121 PPSISAATLKEILHLAELQLCSASDSDRLAALQLLERSLVPDPSLDPDCTPELMRGIIAN 180
           PP +S+  L+E+ H AELQL + S  ++LAAL LLERSLVP P  DP+C PELMRG++  
Sbjct: 121 PPPMSSTGLQELFHAAELQLSTGSFPEQLAALHLLERSLVPYPPSDPECPPELMRGLVRI 180

Query: 181 LNTKTGSKPSTKILLALCLAESNRHIAVEAGAVGAVIESLPEMEDPAAERALASLELMCT 240
           L  K G+KP+TK+LLALCLAE NRH+AVEAGA  AV+E+  E+ED AAERALA+LELMCT
Sbjct: 181 LKNKAGAKPATKVLLALCLAEPNRHVAVEAGAASAVVETALELEDAAAERALAALELMCT 240

Query: 241 VPEGAAEVRAHALSVPAMVMMMGRMAARGKESAISVLGVIFDNGVSPEAESAVT-APPEE 300
           V EGAAEVR+HAL+VP MVMMMGR +ARGKE AI VL VI+      EA  AV+ AP EE
Sbjct: 241 VAEGAAEVRSHALAVPVMVMMMGRTSARGKEYAIGVLAVIYGGASEDEAAEAVSAAPAEE 300

Query: 301 VARAVVLALQGDSSARGRRKGARLLKALEEQQE 312
           VARAV LAL+GD S RGRRKGA+LLKAL  ++E
Sbjct: 301 VARAVELALKGDCSGRGRRKGAQLLKALRPEEE 333

The following BLAST results are available for this feature:

BLAST of CmaCh09G006390 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PUB26_ARATH	3.5e-12	31.43	U-box domain-containing protein 26 OS=Arabidopsis thaliana GN=PUB26 PE=2 SV=1	[more]
PUB25_ARATH	7.4e-10	34.00	U-box domain-containing protein 25 OS=Arabidopsis thaliana GN=PUB25 PE=2 SV=1	[more]

BLAST of CmaCh09G006390 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LEW4_CUCSA	7.7e-139	87.30	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G895740 PE=4 SV=1	[more]
A0A061GIN4_THECC	5.4e-92	60.17	ARM repeat superfamily protein, putative OS=Theobroma cacao GN=TCM_037166 PE=4 S...	[more]
V4UCX0_9ROSI	1.1e-89	61.92	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10008902mg PE=4 SV=1	[more]
B9RS36_RICCO	3.7e-85	57.06	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0802650 PE=4 SV=1	[more]
A0A067KDL2_JATCU	1.1e-84	56.98	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07768 PE=4 SV=1	[more]

BLAST of CmaCh09G006390 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G11550.1	2.5e-72	54.49	ARM repeat superfamily protein	[more]
AT1G49780.1	2.0e-13	31.43	plant U-box 26	[more]
AT3G19380.1	4.2e-11	34.00	plant U-box 25	[more]
AT2G35930.1	5.3e-06	29.71	plant U-box 23	[more]

BLAST of CmaCh09G006390 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659132162\|ref\|XP_008466051.1\|	3.4e-140	85.28	PREDICTED: U-box domain-containing protein 26 [Cucumis melo]	[more]
gi\|449436874\|ref\|XP_004136217.1\|	1.1e-138	87.30	PREDICTED: U-box domain-containing protein 26 [Cucumis sativus]	[more]
gi\|590573332\|ref\|XP_007012091.1\|	7.7e-92	60.17	ARM repeat superfamily protein, putative [Theobroma cacao]	[more]
gi\|568844384\|ref\|XP_006476069.1\|	1.5e-90	62.23	PREDICTED: U-box domain-containing protein 26 [Citrus sinensis]	[more]
gi\|470113282\|ref\|XP_004292853.1\|	2.5e-90	60.66	PREDICTED: E3 ubiquitin-protein ligase PUB23 [Fragaria vesca subsp. vesca]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR011989	ARM-like
IPR016024	ARM-type_fold

Vocabulary: **Molecular Function**
Term	Definition
GO:0005488	binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005488	binding
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh09G006390.1	CmaCh09G006390.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011989	Armadillo-like helical	GENE3D	G3DSA:1.25.10.10		coord: 155..306 score: 2.
IPR016024	Armadillo-type fold	unknown	SSF48371	ARM repeat	coord: 117..265 score: 3.
None	No IPR available	PANTHER	PTHR22849	WDSAM1 PROTEIN	coord: 34..308 score: 1.0E
None	No IPR available	PANTHER	PTHR22849:SF35	SUBFAMILY NOT NAMED	coord: 34..308 score: 1.0E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh09G006390	Cucsa.312620	Cucumber (Gy14) v1	cgycmaB0854
CmaCh09G006390	Cla023118	Watermelon (97103) v1	cmawmB036
CmaCh09G006390	Csa3G895740	Cucumber (Chinese Long) v2	cmacuB014
CmaCh09G006390	MELO3C003458	Melon (DHL92) v3.5.1	cmameB034
CmaCh09G006390	ClCG11G015200	Watermelon (Charleston Gray)	cmawcgB014
CmaCh09G006390	CSPI03G46170	Wild cucumber (PI 183967)	cmacpiB014
CmaCh09G006390	CmoCh09G006210	Cucurbita moschata (Rifu)	cmacmoB027
CmaCh09G006390	Lsi04G023340	Bottle gourd (USVL1VR-Ls)	cmalsiB022
CmaCh09G006390	Cp4.1LG06g04910	Cucurbita pepo (Zucchini)	cmacpeB060
CmaCh09G006390	MELO3C003458.2	Melon (DHL92) v3.6.1	cmamedB033
CmaCh09G006390	CsaV3_3G048620	Cucumber (Chinese Long) v3	cmacucB0021
CmaCh09G006390	Cla97C11G221230	Watermelon (97103) v2	cmawmbB019
CmaCh09G006390	Bhi09G002186	Wax gourd	cmawgoB0026
CmaCh09G006390	CsGy3G043640	Cucumber (Gy14) v2	cgybcmaB285
CmaCh09G006390	Carg03048	Silver-seed gourd	carcmaB0889

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh09G006390	Cucurbita pepo (Zucchini)	cmacpeB047
CmaCh09G006390	Cucumber (Gy14) v2	cgybcmaB146
CmaCh09G006390	Silver-seed gourd	carcmaB0934
CmaCh09G006390	Cucumber (Chinese Long) v3	cmacucB0014
CmaCh09G006390	Watermelon (97103) v2	cmawmbB041
CmaCh09G006390	Wax gourd	cmawgoB0021
CmaCh09G006390	Cucurbita maxima (Rimu)	cmacmaB035
CmaCh09G006390	Cucurbita maxima (Rimu)	cmacmaB053
CmaCh09G006390	Cucurbita moschata (Rifu)	cmacmoB049