CmaCh09G000820.1 (mRNA) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh09G000820.1
Type	mRNA
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Blue (Type 1) copper protein
Location	Cma_Chr09 : 361527 .. 362030 (+)
Sequence length	504

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCACCGTCACCTCCGCCACCGTTGCCATCCCCTCCTTCACCGGCCTCAAGACCTCCGCCACCGCTTCCAAATCCACCGCCGCCGTCCGCGTCTCCTCCCCCTCGGTCCCCAAGCTGACCGTCAGGGCCTCTCTGAAGGACCTTGGTGTGGCCGTGGCCGCCACCGCCGCCAGTGCCCTGCTGGCCTCAAACGCCTTGGCCATTGAGGTCTTGCTAGGCGGCGACGACGGATCTCTAGCCTTCATTCCGAACGATTTCTCGGTGGCGGCCGGTGAGAAAATCGTGTTCAAGAACAACGCGGGTTTCCCACACAACGTGGTGTTCGACGAGGACGAAATCCCAAGCGGAGTGGACGCCGGCAAGATCTCGATGAACGAGGAAGATCTTCTTAACGCCCCCGGCGAGGTCTACGAAGTCAATCTCACCGAGAAAGGAAGCTACTCCTTCTACTGTTCGCCCCATCAAGGAGCTGGAATGGTCGGCAAAGTCACCGTTAACTGA

mRNA sequence

ATGGCCACCGTCACCTCCGCCACCGTTGCCATCCCCTCCTTCACCGGCCTCAAGACCTCCGCCACCGCTTCCAAATCCACCGCCGCCGTCCGCGTCTCCTCCCCCTCGGTCCCCAAGCTGACCGTCAGGGCCTCTCTGAAGGACCTTGGTGTGGCCGTGGCCGCCACCGCCGCCAGTGCCCTGCTGGCCTCAAACGCCTTGGCCATTGAGGTCTTGCTAGGCGGCGACGACGGATCTCTAGCCTTCATTCCGAACGATTTCTCGGTGGCGGCCGGTGAGAAAATCGTGTTCAAGAACAACGCGGGTTTCCCACACAACGTGGTGTTCGACGAGGACGAAATCCCAAGCGGAGTGGACGCCGGCAAGATCTCGATGAACGAGGAAGATCTTCTTAACGCCCCCGGCGAGGTCTACGAAGTCAATCTCACCGAGAAAGGAAGCTACTCCTTCTACTGTTCGCCCCATCAAGGAGCTGGAATGGTCGGCAAAGTCACCGTTAACTGA

Coding sequence (CDS)

ATGGCCACCGTCACCTCCGCCACCGTTGCCATCCCCTCCTTCACCGGCCTCAAGACCTCCGCCACCGCTTCCAAATCCACCGCCGCCGTCCGCGTCTCCTCCCCCTCGGTCCCCAAGCTGACCGTCAGGGCCTCTCTGAAGGACCTTGGTGTGGCCGTGGCCGCCACCGCCGCCAGTGCCCTGCTGGCCTCAAACGCCTTGGCCATTGAGGTCTTGCTAGGCGGCGACGACGGATCTCTAGCCTTCATTCCGAACGATTTCTCGGTGGCGGCCGGTGAGAAAATCGTGTTCAAGAACAACGCGGGTTTCCCACACAACGTGGTGTTCGACGAGGACGAAATCCCAAGCGGAGTGGACGCCGGCAAGATCTCGATGAACGAGGAAGATCTTCTTAACGCCCCCGGCGAGGTCTACGAAGTCAATCTCACCGAGAAAGGAAGCTACTCCTTCTACTGTTCGCCCCATCAAGGAGCTGGAATGGTCGGCAAAGTCACCGTTAACTGA

Protein sequence

MATVTSATVAIPSFTGLKTSATASKSTAAVRVSSPSVPKLTVRASLKDLGVAVAATAASALLASNALAIEVLLGGDDGSLAFIPNDFSVAAGEKIVFKNNAGFPHNVVFDEDEIPSGVDAGKISMNEEDLLNAPGEVYEVNLTEKGSYSFYCSPHQGAGMVGKVTVN

Homology

[Close]

BLAST of CmaCh09G000820.1 vs. Swiss-Prot
Match: PLAS_SOLLC (Plastocyanin, chloroplastic OS=Solanum lycopersicum GN=PETE PE=2 SV=1)

HSP 1 Score: 239.2 bits (609), Expect = 3.3e-62
Identity = 127/170 (74.71%), Postives = 147/170 (86.47%), Query Frame = 1


Query: 1   MATVTSATVAIPSFTGLKTSATASKST---AAVRVSSPSVPKLTVRASLKDLGVAVAATA 60
           MATVTSA VAIPSFTGLK  A++S      A+ +V++  V +LTV+ASLKD+G  VAATA
Sbjct: 1   MATVTSAAVAIPSFTGLKAGASSSSRVSTGASAKVAAAPVARLTVKASLKDVGAVVAATA 60

Query: 61  ASALLASNALAIEVLLGGDDGSLAFIPNDFSVAAGEKIVFKNNAGFPHNVVFDEDEIPSG 120
            SA+LASNA+A+EVLLGGDDGSLAFIP +FSV+AGEKI FKNNAGFPHNVVFDEDEIP+G
Sbjct: 61  VSAMLASNAMALEVLLGGDDGSLAFIPGNFSVSAGEKITFKNNAGFPHNVVFDEDEIPAG 120

Query: 121 VDAGKISMNEEDLLNAPGEVYEVNLTEKGSYSFYCSPHQGAGMVGKVTVN 168
           VDA KISM+EEDLLNA GE Y V L+EKG+Y+FYC+PHQGAGMVGKVTVN
Sbjct: 121 VDASKISMSEEDLLNAAGETYSVTLSEKGTYTFYCAPHQGAGMVGKVTVN 170

[Close]

BLAST of CmaCh09G000820.1 vs. Swiss-Prot
Match: PLAS_SPIOL (Plastocyanin, chloroplastic OS=Spinacia oleracea GN=PETE PE=1 SV=2)

HSP 1 Score: 238.4 bits (607), Expect = 5.6e-62
Identity = 125/168 (74.40%), Postives = 147/168 (87.50%), Query Frame = 1


Query: 1   MATV-TSATVAIPSFTGLKTSATASKSTAAVRVSSPSVPKLTVRASLKDLGVAVAATAAS 60
           MATV +SA VA+PSFTGLK S +   +TA +  ++ +VP+L+V+ASLK++G AV ATAA+
Sbjct: 1   MATVASSAAVAVPSFTGLKASGSIKPTTAKIIPTTTAVPRLSVKASLKNVGAAVVATAAA 60

Query: 61  ALLASNALAIEVLLGGDDGSLAFIPNDFSVAAGEKIVFKNNAGFPHNVVFDEDEIPSGVD 120
            LLA NA+A+EVLLGG DGSLAF+P DFSVA+GE+IVFKNNAGFPHNVVFDEDEIPSGVD
Sbjct: 61  GLLAGNAMAVEVLLGGGDGSLAFLPGDFSVASGEEIVFKNNAGFPHNVVFDEDEIPSGVD 120

Query: 121 AGKISMNEEDLLNAPGEVYEVNLTEKGSYSFYCSPHQGAGMVGKVTVN 168
           A KISM+EEDLLNAPGE Y+V LTEKG+Y FYCSPHQGAGMVGKVTVN
Sbjct: 121 AAKISMSEEDLLNAPGETYKVTLTEKGTYKFYCSPHQGAGMVGKVTVN 168

[Close]

BLAST of CmaCh09G000820.1 vs. Swiss-Prot
Match: PLAS2_ARATH (Plastocyanin major isoform, chloroplastic OS=Arabidopsis thaliana GN=DRT112 PE=1 SV=2)

HSP 1 Score: 236.9 bits (603), Expect = 1.6e-61
Identity = 124/167 (74.25%), Postives = 141/167 (84.43%), Query Frame = 1


Query: 1   MATVTSATVAIPSFTGLKTSATASKSTAAVRVSSPSVPKLTVRASLKDLGVAVAATAASA 60
           MA+VTSATVAIPSFTGLK S   S +T  ++ ++ + PKLTV++SLK+ GVA  A AAS 
Sbjct: 1   MASVTSATVAIPSFTGLKASTIKSSATVRIQTAAVASPKLTVKSSLKNFGVAAVAAAASI 60

Query: 61  LLASNALAIEVLLGGDDGSLAFIPNDFSVAAGEKIVFKNNAGFPHNVVFDEDEIPSGVDA 120
            LA NA+AIEVLLGG DGSLAFIPNDFS+A GEKIVFKNNAG+PHNVVFDEDEIPSGVD 
Sbjct: 61  ALAGNAMAIEVLLGGGDGSLAFIPNDFSIAKGEKIVFKNNAGYPHNVVFDEDEIPSGVDV 120

Query: 121 GKISMNEEDLLNAPGEVYEVNLTEKGSYSFYCSPHQGAGMVGKVTVN 168
            KISM+E+DLLN  GE YEV LTE G+YSFYC+PHQGAGMVGKVTVN
Sbjct: 121 AKISMDEQDLLNGAGETYEVALTEPGTYSFYCAPHQGAGMVGKVTVN 167

[Close]

BLAST of CmaCh09G000820.1 vs. Swiss-Prot
Match: PLAS1_POPNI (Plastocyanin A, chloroplastic OS=Populus nigra GN=PETE PE=1 SV=2)

HSP 1 Score: 236.5 bits (602), Expect = 2.1e-61
Identity = 122/168 (72.62%), Postives = 149/168 (88.69%), Query Frame = 1


Query: 1   MATVTSATVAIPSFTGLKT-SATASKSTAAVRVSSPSVPKLTVRASLKDLGVAVAATAAS 60
           MATVTSA V+IPSFTGLK  SA+ +K +A+ +VS+  +P+L+++AS+KD+G AV ATAAS
Sbjct: 1   MATVTSAAVSIPSFTGLKAGSASNAKVSASAKVSASPLPRLSIKASMKDVGAAVVATAAS 60

Query: 61  ALLASNALAIEVLLGGDDGSLAFIPNDFSVAAGEKIVFKNNAGFPHNVVFDEDEIPSGVD 120
           A++ASNA+AI+VLLG DDGSLAF+P++FS++ GEKIVFKNNAGFPHN+VFDED IPSGVD
Sbjct: 61  AMIASNAMAIDVLLGADDGSLAFVPSEFSISPGEKIVFKNNAGFPHNIVFDEDSIPSGVD 120

Query: 121 AGKISMNEEDLLNAPGEVYEVNLTEKGSYSFYCSPHQGAGMVGKVTVN 168
           A KISM+EEDLLNA GE +EV L+ KG YSFYCSPHQGAGMVGKVTVN
Sbjct: 121 ASKISMSEEDLLNAKGETFEVALSNKGEYSFYCSPHQGAGMVGKVTVN 168

[Close]

BLAST of CmaCh09G000820.1 vs. Swiss-Prot
Match: PLAS2_POPNI (Plastocyanin B, chloroplastic OS=Populus nigra GN=PETE PE=1 SV=2)

HSP 1 Score: 229.2 bits (583), Expect = 3.4e-59
Identity = 118/168 (70.24%), Postives = 147/168 (87.50%), Query Frame = 1


Query: 1   MATVTSATVAIPSFTGLKT-SATASKSTAAVRVSSPSVPKLTVRASLKDLGVAVAATAAS 60
           MA VTSA V+IPSFTGLK  SA+ +K +A+ +VS+  +P+L+++ASLK++G AV ATAAS
Sbjct: 1   MAAVTSAAVSIPSFTGLKAASASNAKVSASAKVSASPLPRLSIKASLKEVGAAVVATAAS 60

Query: 61  ALLASNALAIEVLLGGDDGSLAFIPNDFSVAAGEKIVFKNNAGFPHNVVFDEDEIPSGVD 120
           A++ASNA+A++VLLG DDGSLAF+P++FSV AGEKIVFKNNAGFPHNV+FDED +PSGVD
Sbjct: 61  AMIASNAMAVDVLLGADDGSLAFVPSEFSVPAGEKIVFKNNAGFPHNVLFDEDAVPSGVD 120

Query: 121 AGKISMNEEDLLNAPGEVYEVNLTEKGSYSFYCSPHQGAGMVGKVTVN 168
             KISM+EEDLLNA GE +EV L++KG Y+FYCSPHQGAGMVGKV VN
Sbjct: 121 VSKISMSEEDLLNAKGETFEVALSDKGEYTFYCSPHQGAGMVGKVIVN 168

[Close]

BLAST of CmaCh09G000820.1 vs. TrEMBL
Match: A0A0A0LE99_CUCSA (Plastocyanin OS=Cucumis sativus GN=Csa_3G875430 PE=3 SV=1)

HSP 1 Score: 263.1 bits (671), Expect = 2.3e-67
Identity = 138/167 (82.63%), Postives = 155/167 (92.81%), Query Frame = 1


Query: 1   MATVTSATVAIPSFTGLKTSATASKSTAAVRVSSPSVPKLTVRASLKDLGVAVAATAASA 60
           MA VTSA VAIPSFTGLK S ++SK T+ +R+ SP+ PKL ++ASLKD+GVAVAATAASA
Sbjct: 1   MAAVTSAAVAIPSFTGLK-STSSSKPTSLIRLPSPASPKLCIKASLKDVGVAVAATAASA 60

Query: 61  LLASNALAIEVLLGGDDGSLAFIPNDFSVAAGEKIVFKNNAGFPHNVVFDEDEIPSGVDA 120
           LLASNA+AIE+LLGGDDGSLAF+PN+F+VA+GEKI FKNNAGFPHNVVFDEDEIPSGVD 
Sbjct: 61  LLASNAMAIEILLGGDDGSLAFVPNNFTVASGEKITFKNNAGFPHNVVFDEDEIPSGVDV 120

Query: 121 GKISMNEEDLLNAPGEVYEVNLTEKGSYSFYCSPHQGAGMVGKVTVN 168
           GKISM+EE+LLNAPGEVYEV LTEKGSYSFYCSPHQGAGMVGKVTVN
Sbjct: 121 GKISMDEENLLNAPGEVYEVQLTEKGSYSFYCSPHQGAGMVGKVTVN 166

[Close]

BLAST of CmaCh09G000820.1 vs. TrEMBL
Match: A0A061FDN2_THECC (Plastocyanin OS=Theobroma cacao GN=TCM_034307 PE=3 SV=1)

HSP 1 Score: 255.0 bits (650), Expect = 6.4e-65
Identity = 132/167 (79.04%), Postives = 152/167 (91.02%), Query Frame = 1


Query: 1   MATVTSATVAIPSFTGLKTSATASKSTAAVRVSSPSVPKLTVRASLKDLGVAVAATAASA 60
           MA VTSA VAIPSFTGLK  AT +K++A  +V++ S P L+++ASLKD+GVAVAATAASA
Sbjct: 1   MAAVTSAAVAIPSFTGLKAGATPAKASATTKVATSSGPMLSIKASLKDVGVAVAATAASA 60

Query: 61  LLASNALAIEVLLGGDDGSLAFIPNDFSVAAGEKIVFKNNAGFPHNVVFDEDEIPSGVDA 120
           +LASNALAIEV LGGDDG LAF+P+DFSV+AGEKIVFKNNAGFPHNV+FDEDEIPSGVDA
Sbjct: 61  ILASNALAIEVKLGGDDGELAFVPSDFSVSAGEKIVFKNNAGFPHNVIFDEDEIPSGVDA 120

Query: 121 GKISMNEEDLLNAPGEVYEVNLTEKGSYSFYCSPHQGAGMVGKVTVN 168
            KISM++E+LLNAPGEVY V LTEKG+YSFYC+PHQGAGMVGKVTVN
Sbjct: 121 SKISMSDEELLNAPGEVYAVTLTEKGTYSFYCTPHQGAGMVGKVTVN 167

[Close]

BLAST of CmaCh09G000820.1 vs. TrEMBL
Match: I1JSY7_SOYBN (Plastocyanin OS=Glycine max GN=GLYMA_04G020300 PE=3 SV=1)

HSP 1 Score: 254.6 bits (649), Expect = 8.3e-65
Identity = 135/167 (80.84%), Postives = 152/167 (91.02%), Query Frame = 1


Query: 1   MATVTSATVAIPSFTGLKTSATASKSTAAVRVSSPSVPKLTVRASLKDLGVAVAATAASA 60
           MATVTSA VAIPSFTGLK  A+A K +AAV+VS+P   +L ++ASLKD+GVAV ATAASA
Sbjct: 1   MATVTSAAVAIPSFTGLK--ASAGKVSAAVKVSAPQATRLGIKASLKDVGVAVVATAASA 60

Query: 61  LLASNALAIEVLLGGDDGSLAFIPNDFSVAAGEKIVFKNNAGFPHNVVFDEDEIPSGVDA 120
           +LASNA+AIEVLLGGDDGSLAF+PN+FSVA+GEKIVFKNNAGFPHNVVFDEDEIPSGVDA
Sbjct: 61  VLASNAMAIEVLLGGDDGSLAFVPNNFSVASGEKIVFKNNAGFPHNVVFDEDEIPSGVDA 120

Query: 121 GKISMNEEDLLNAPGEVYEVNLTEKGSYSFYCSPHQGAGMVGKVTVN 168
           GKISM++EDLLNAPGE Y V L  KG+YSF+CSPHQGAGMVGKVTVN
Sbjct: 121 GKISMSDEDLLNAPGETYSVTLDAKGTYSFFCSPHQGAGMVGKVTVN 165

[Close]

BLAST of CmaCh09G000820.1 vs. TrEMBL
Match: A0A0B2RGW1_GLYSO (Plastocyanin OS=Glycine soja GN=glysoja_013832 PE=3 SV=1)

HSP 1 Score: 254.6 bits (649), Expect = 8.3e-65
Identity = 135/167 (80.84%), Postives = 152/167 (91.02%), Query Frame = 1


Query: 1   MATVTSATVAIPSFTGLKTSATASKSTAAVRVSSPSVPKLTVRASLKDLGVAVAATAASA 60
           MATVTSA VAIPSFTGLK  A+A K +AAV+VS+P   +L ++ASLKD+GVAV ATAASA
Sbjct: 1   MATVTSAAVAIPSFTGLK--ASAGKVSAAVKVSAPQATRLGIKASLKDVGVAVVATAASA 60

Query: 61  LLASNALAIEVLLGGDDGSLAFIPNDFSVAAGEKIVFKNNAGFPHNVVFDEDEIPSGVDA 120
           +LASNA+AIEVLLGGDDGSLAF+PN+FSVA+GEKIVFKNNAGFPHNVVFDEDEIPSGVDA
Sbjct: 61  VLASNAMAIEVLLGGDDGSLAFVPNNFSVASGEKIVFKNNAGFPHNVVFDEDEIPSGVDA 120

Query: 121 GKISMNEEDLLNAPGEVYEVNLTEKGSYSFYCSPHQGAGMVGKVTVN 168
           GKISM++EDLLNAPGE Y V L  KG+YSF+CSPHQGAGMVGKVTVN
Sbjct: 121 GKISMSDEDLLNAPGETYSVTLDAKGTYSFFCSPHQGAGMVGKVTVN 165

[Close]

BLAST of CmaCh09G000820.1 vs. TrEMBL
Match: C6SZV4_SOYBN (Plastocyanin OS=Glycine max PE=2 SV=1)

HSP 1 Score: 251.5 bits (641), Expect = 7.1e-64
Identity = 134/167 (80.24%), Postives = 151/167 (90.42%), Query Frame = 1


Query: 1   MATVTSATVAIPSFTGLKTSATASKSTAAVRVSSPSVPKLTVRASLKDLGVAVAATAASA 60
           MATVTSA VAIPSFTGLK  A+A   +AAV+VS+P   +L ++ASLKD+GVAV ATAASA
Sbjct: 1   MATVTSAAVAIPSFTGLK--ASAGIVSAAVKVSAPQATRLGIKASLKDVGVAVVATAASA 60

Query: 61  LLASNALAIEVLLGGDDGSLAFIPNDFSVAAGEKIVFKNNAGFPHNVVFDEDEIPSGVDA 120
           +LASNA+AIEVLLGGDDGSLAF+PN+FSVA+GEKIVFKNNAGFPHNVVFDEDEIPSGVDA
Sbjct: 61  VLASNAMAIEVLLGGDDGSLAFVPNNFSVASGEKIVFKNNAGFPHNVVFDEDEIPSGVDA 120

Query: 121 GKISMNEEDLLNAPGEVYEVNLTEKGSYSFYCSPHQGAGMVGKVTVN 168
           GKISM++EDLLNAPGE Y V L  KG+YSF+CSPHQGAGMVGKVTVN
Sbjct: 121 GKISMSDEDLLNAPGETYSVTLDAKGTYSFFCSPHQGAGMVGKVTVN 165

[Close]

BLAST of CmaCh09G000820.1 vs. TAIR10
Match: AT1G20340.1 (AT1G20340.1 Cupredoxin superfamily protein)

HSP 1 Score: 236.9 bits (603), Expect = 9.1e-63
Identity = 124/167 (74.25%), Postives = 141/167 (84.43%), Query Frame = 1


Query: 1   MATVTSATVAIPSFTGLKTSATASKSTAAVRVSSPSVPKLTVRASLKDLGVAVAATAASA 60
           MA+VTSATVAIPSFTGLK S   S +T  ++ ++ + PKLTV++SLK+ GVA  A AAS 
Sbjct: 1   MASVTSATVAIPSFTGLKASTIKSSATVRIQTAAVASPKLTVKSSLKNFGVAAVAAAASI 60

Query: 61  LLASNALAIEVLLGGDDGSLAFIPNDFSVAAGEKIVFKNNAGFPHNVVFDEDEIPSGVDA 120
            LA NA+AIEVLLGG DGSLAFIPNDFS+A GEKIVFKNNAG+PHNVVFDEDEIPSGVD 
Sbjct: 61  ALAGNAMAIEVLLGGGDGSLAFIPNDFSIAKGEKIVFKNNAGYPHNVVFDEDEIPSGVDV 120

Query: 121 GKISMNEEDLLNAPGEVYEVNLTEKGSYSFYCSPHQGAGMVGKVTVN 168
            KISM+E+DLLN  GE YEV LTE G+YSFYC+PHQGAGMVGKVTVN
Sbjct: 121 AKISMDEQDLLNGAGETYEVALTEPGTYSFYCAPHQGAGMVGKVTVN 167

[Close]

BLAST of CmaCh09G000820.1 vs. TAIR10
Match: AT1G76100.1 (AT1G76100.1 plastocyanin 1)

HSP 1 Score: 218.4 bits (555), Expect = 3.4e-57
Identity = 120/174 (68.97%), Postives = 137/174 (78.74%), Query Frame = 1


Query: 1   MATVTSATVAIPSFTGLK--------TSATASKSTAAVRVSSPSVPKLTVRASLKDLGVA 60
           MA +TSATV IPSFTGLK        T +T S+ST+A R      PKL +++SLKD GV 
Sbjct: 1   MAAITSATVTIPSFTGLKLAVSSKPKTLSTISRSTSATRAP----PKLALKSSLKDFGVI 60

Query: 61  VAATAASALLASNALAIEVLLGGDDGSLAFIPNDFSVAAGEKIVFKNNAGFPHNVVFDED 120
             ATAAS +LA NA+A+EVLLG DDGSLAF+P++F+VA GEKIVFKNNAGFPHNVVFDED
Sbjct: 61  AVATAASIVLAGNAMAMEVLLGSDDGSLAFVPSEFTVAKGEKIVFKNNAGFPHNVVFDED 120

Query: 121 EIPSGVDAGKISMNEEDLLNAPGEVYEVNLTEKGSYSFYCSPHQGAGMVGKVTV 167
           EIPSGVDA KISM+E  LLN  GE YEV LTE GSY FYC+PHQGAGMVGK+TV
Sbjct: 121 EIPSGVDASKISMDETALLNGAGETYEVTLTEPGSYGFYCAPHQGAGMVGKLTV 170

[Close]

BLAST of CmaCh09G000820.1 vs. NCBI nr
Match: gi|659132911|ref|XP_008466451.1| (PREDICTED: plastocyanin [Cucumis melo])

HSP 1 Score: 268.5 bits (685), Expect = 8.0e-69
Identity = 142/167 (85.03%), Postives = 159/167 (95.21%), Query Frame = 1


Query: 1   MATVTSATVAIPSFTGLKTSATASKSTAAVRVSSPSVPKLTVRASLKDLGVAVAATAASA 60
           MA VTSA VAIPSFTGLK+S++ SK T+A+R+ SP+ PKL+VRASLKD+GVAVAATAASA
Sbjct: 1   MAAVTSAAVAIPSFTGLKSSSS-SKPTSAIRLPSPASPKLSVRASLKDVGVAVAATAASA 60

Query: 61  LLASNALAIEVLLGGDDGSLAFIPNDFSVAAGEKIVFKNNAGFPHNVVFDEDEIPSGVDA 120
           LLASNA+AIE+LLGGDDGSLAF+PN+F+VA+GE IVFKNNAGFPHNVVFDEDEIPSGVDA
Sbjct: 61  LLASNAMAIEILLGGDDGSLAFVPNNFTVASGETIVFKNNAGFPHNVVFDEDEIPSGVDA 120

Query: 121 GKISMNEEDLLNAPGEVYEVNLTEKGSYSFYCSPHQGAGMVGKVTVN 168
           GKISM+EE+LLNAPGEVYEV LTEKGSYSFYCSPHQGAGMVGKVTVN
Sbjct: 121 GKISMDEENLLNAPGEVYEVQLTEKGSYSFYCSPHQGAGMVGKVTVN 166

[Close]

BLAST of CmaCh09G000820.1 vs. NCBI nr
Match: gi|449437172|ref|XP_004136366.1| (PREDICTED: plastocyanin [Cucumis sativus])

HSP 1 Score: 263.1 bits (671), Expect = 3.4e-67
Identity = 138/167 (82.63%), Postives = 155/167 (92.81%), Query Frame = 1


Query: 1   MATVTSATVAIPSFTGLKTSATASKSTAAVRVSSPSVPKLTVRASLKDLGVAVAATAASA 60
           MA VTSA VAIPSFTGLK S ++SK T+ +R+ SP+ PKL ++ASLKD+GVAVAATAASA
Sbjct: 1   MAAVTSAAVAIPSFTGLK-STSSSKPTSLIRLPSPASPKLCIKASLKDVGVAVAATAASA 60

Query: 61  LLASNALAIEVLLGGDDGSLAFIPNDFSVAAGEKIVFKNNAGFPHNVVFDEDEIPSGVDA 120
           LLASNA+AIE+LLGGDDGSLAF+PN+F+VA+GEKI FKNNAGFPHNVVFDEDEIPSGVD 
Sbjct: 61  LLASNAMAIEILLGGDDGSLAFVPNNFTVASGEKITFKNNAGFPHNVVFDEDEIPSGVDV 120

Query: 121 GKISMNEEDLLNAPGEVYEVNLTEKGSYSFYCSPHQGAGMVGKVTVN 168
           GKISM+EE+LLNAPGEVYEV LTEKGSYSFYCSPHQGAGMVGKVTVN
Sbjct: 121 GKISMDEENLLNAPGEVYEVQLTEKGSYSFYCSPHQGAGMVGKVTVN 166

[Close]

BLAST of CmaCh09G000820.1 vs. NCBI nr
Match: gi|590594685|ref|XP_007017921.1| (Plastocyanin 1 [Theobroma cacao])

HSP 1 Score: 255.0 bits (650), Expect = 9.2e-65
Identity = 132/167 (79.04%), Postives = 152/167 (91.02%), Query Frame = 1


Query: 1   MATVTSATVAIPSFTGLKTSATASKSTAAVRVSSPSVPKLTVRASLKDLGVAVAATAASA 60
           MA VTSA VAIPSFTGLK  AT +K++A  +V++ S P L+++ASLKD+GVAVAATAASA
Sbjct: 1   MAAVTSAAVAIPSFTGLKAGATPAKASATTKVATSSGPMLSIKASLKDVGVAVAATAASA 60

Query: 61  LLASNALAIEVLLGGDDGSLAFIPNDFSVAAGEKIVFKNNAGFPHNVVFDEDEIPSGVDA 120
           +LASNALAIEV LGGDDG LAF+P+DFSV+AGEKIVFKNNAGFPHNV+FDEDEIPSGVDA
Sbjct: 61  ILASNALAIEVKLGGDDGELAFVPSDFSVSAGEKIVFKNNAGFPHNVIFDEDEIPSGVDA 120

Query: 121 GKISMNEEDLLNAPGEVYEVNLTEKGSYSFYCSPHQGAGMVGKVTVN 168
            KISM++E+LLNAPGEVY V LTEKG+YSFYC+PHQGAGMVGKVTVN
Sbjct: 121 SKISMSDEELLNAPGEVYAVTLTEKGTYSFYCTPHQGAGMVGKVTVN 167

[Close]

BLAST of CmaCh09G000820.1 vs. NCBI nr
Match: gi|734406057|gb|KHN33826.1| (Plastocyanin, chloroplastic [Glycine soja])

HSP 1 Score: 254.6 bits (649), Expect = 1.2e-64
Identity = 135/167 (80.84%), Postives = 152/167 (91.02%), Query Frame = 1


Query: 1   MATVTSATVAIPSFTGLKTSATASKSTAAVRVSSPSVPKLTVRASLKDLGVAVAATAASA 60
           MATVTSA VAIPSFTGLK  A+A K +AAV+VS+P   +L ++ASLKD+GVAV ATAASA
Sbjct: 1   MATVTSAAVAIPSFTGLK--ASAGKVSAAVKVSAPQATRLGIKASLKDVGVAVVATAASA 60

Query: 61  LLASNALAIEVLLGGDDGSLAFIPNDFSVAAGEKIVFKNNAGFPHNVVFDEDEIPSGVDA 120
           +LASNA+AIEVLLGGDDGSLAF+PN+FSVA+GEKIVFKNNAGFPHNVVFDEDEIPSGVDA
Sbjct: 61  VLASNAMAIEVLLGGDDGSLAFVPNNFSVASGEKIVFKNNAGFPHNVVFDEDEIPSGVDA 120

Query: 121 GKISMNEEDLLNAPGEVYEVNLTEKGSYSFYCSPHQGAGMVGKVTVN 168
           GKISM++EDLLNAPGE Y V L  KG+YSF+CSPHQGAGMVGKVTVN
Sbjct: 121 GKISMSDEDLLNAPGETYSVTLDAKGTYSFFCSPHQGAGMVGKVTVN 165

[Close]

BLAST of CmaCh09G000820.1 vs. NCBI nr
Match: gi|1012203378|ref|XP_015973807.1| (PREDICTED: plastocyanin [Arachis duranensis])

HSP 1 Score: 252.3 bits (643), Expect = 5.9e-64
Identity = 137/170 (80.59%), Postives = 152/170 (89.41%), Query Frame = 1


Query: 1   MATVT-SATVAIPSFTGLKTSAT--ASKSTAAVRVSSPSVPKLTVRASLKDLGVAVAATA 60
           MAT+T SA V IPSFTGLK +AT   +K +A V+VS+   P+L V+ASLKD+GVAV ATA
Sbjct: 1   MATITNSAAVTIPSFTGLKATATNATTKVSAGVKVSAAQFPRLGVKASLKDVGVAVVATA 60

Query: 61  ASALLASNALAIEVLLGGDDGSLAFIPNDFSVAAGEKIVFKNNAGFPHNVVFDEDEIPSG 120
           ASA+LASNA+AIEVLLGGDDGSLAFIP DFS+AAGEKIVFKNNAGFPHNVVFDEDEIPSG
Sbjct: 61  ASAVLASNAMAIEVLLGGDDGSLAFIPKDFSIAAGEKIVFKNNAGFPHNVVFDEDEIPSG 120

Query: 121 VDAGKISMNEEDLLNAPGEVYEVNLTEKGSYSFYCSPHQGAGMVGKVTVN 168
           VDA KISM+EEDLLNAPGEVY V L+EKG+YSFYCSPHQGAGMVGKVTVN
Sbjct: 121 VDASKISMSEEDLLNAPGEVYNVTLSEKGTYSFYCSPHQGAGMVGKVTVN 170

The following BLAST results are available for this feature:

BLAST of CmaCh09G000820.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PLAS_SOLLC	3.3e-62	74.71	Plastocyanin, chloroplastic OS=Solanum lycopersicum GN=PETE PE=2 SV=1	[more]
PLAS_SPIOL	5.6e-62	74.40	Plastocyanin, chloroplastic OS=Spinacia oleracea GN=PETE PE=1 SV=2	[more]
PLAS2_ARATH	1.6e-61	74.25	Plastocyanin major isoform, chloroplastic OS=Arabidopsis thaliana GN=DRT112 PE=1...	[more]
PLAS1_POPNI	2.1e-61	72.62	Plastocyanin A, chloroplastic OS=Populus nigra GN=PETE PE=1 SV=2	[more]
PLAS2_POPNI	3.4e-59	70.24	Plastocyanin B, chloroplastic OS=Populus nigra GN=PETE PE=1 SV=2	[more]

BLAST of CmaCh09G000820.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LE99_CUCSA	2.3e-67	82.63	Plastocyanin OS=Cucumis sativus GN=Csa_3G875430 PE=3 SV=1	[more]
A0A061FDN2_THECC	6.4e-65	79.04	Plastocyanin OS=Theobroma cacao GN=TCM_034307 PE=3 SV=1	[more]
I1JSY7_SOYBN	8.3e-65	80.84	Plastocyanin OS=Glycine max GN=GLYMA_04G020300 PE=3 SV=1	[more]
A0A0B2RGW1_GLYSO	8.3e-65	80.84	Plastocyanin OS=Glycine soja GN=glysoja_013832 PE=3 SV=1	[more]
C6SZV4_SOYBN	7.1e-64	80.24	Plastocyanin OS=Glycine max PE=2 SV=1	[more]

BLAST of CmaCh09G000820.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G20340.1	9.1e-63	74.25	Cupredoxin superfamily protein	[more]
AT1G76100.1	3.4e-57	68.97	plastocyanin 1	[more]

BLAST of CmaCh09G000820.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659132911\|ref\|XP_008466451.1\|	8.0e-69	85.03	PREDICTED: plastocyanin [Cucumis melo]	[more]
gi\|449437172\|ref\|XP_004136366.1\|	3.4e-67	82.63	PREDICTED: plastocyanin [Cucumis sativus]	[more]
gi\|590594685\|ref\|XP_007017921.1\|	9.2e-65	79.04	Plastocyanin 1 [Theobroma cacao]	[more]
gi\|734406057\|gb\|KHN33826.1\|	1.2e-64	80.84	Plastocyanin, chloroplastic [Glycine soja]	[more]
gi\|1012203378\|ref\|XP_015973807.1\|	5.9e-64	80.59	PREDICTED: plastocyanin [Arachis duranensis]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR000923	BlueCu_1
IPR001235	Copper_blue_Plastocyanin
IPR002387	Plastocyanin
IPR008972	Cupredoxin

Vocabulary: **Molecular Function**
Term	Definition
GO:0005507	copper ion binding
GO:0009055	electron carrier activity

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
biological_process	GO:0000271	polysaccharide biosynthetic process
biological_process	GO:0009744	response to sucrose
biological_process	GO:0010114	response to red light
biological_process	GO:0009644	response to high light intensity
biological_process	GO:0010218	response to far red light
biological_process	GO:0046686	response to cadmium ion
biological_process	GO:0009637	response to blue light
biological_process	GO:0010155	regulation of proton transport
biological_process	GO:0010817	regulation of hormone levels
biological_process	GO:0009657	plastid organization
biological_process	GO:0006098	pentose-phosphate shunt
biological_process	GO:0017148	negative regulation of translation
biological_process	GO:0009825	multidimensional cell growth
biological_process	GO:0009965	leaf morphogenesis
biological_process	GO:0042744	hydrogen peroxide catabolic process
biological_process	GO:0019344	cysteine biosynthetic process
biological_process	GO:0055070	copper ion homeostasis
biological_process	GO:0071555	cell wall organization
biological_process	GO:0009932	cell tip growth
biological_process	GO:0043481	anthocyanin accumulation in tissues in response to UV light
biological_process	GO:0048767	root hair elongation
cellular_component	GO:0009534	chloroplast thylakoid
cellular_component	GO:0055035	plastid thylakoid membrane
cellular_component	GO:0031977	thylakoid lumen
cellular_component	GO:0009570	chloroplast stroma
molecular_function	GO:0009055	electron carrier activity
molecular_function	GO:0005507	copper ion binding

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmaCh09G000820	CmaCh09G000820	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmaCh09G000820.1	CmaCh09G000820.1-protein	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh09G000820.1.exon.1	CmaCh09G000820.1.exon.1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh09G000820.1.CDS.1	CmaCh09G000820.1.CDS.1	CDS

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000923	Blue (type 1) copper domain	PFAM	PF00127	Copper-bind	coord: 70..167 score: 1.8
IPR001235	Blue (type 1) copper protein, plastocyanin-type	PRINTS	PR00156	COPPERBLUE	coord: 88..101 score: 3.2E-14coord: 144..158 score: 3.2E-14coord: 103..118 score: 3.2
IPR002387	Plastocyanin	PRINTS	PR00157	PLASTOCYANIN	coord: 97..115 score: 2.6E-34coord: 146..165 score: 2.6E-34coord: 74..93 score: 2.6
IPR002387	Plastocyanin	TIGRFAMs	TIGR02656	TIGR02656	coord: 69..167 score: 2.3
IPR008972	Cupredoxin	GENE3D	G3DSA:2.60.40.420		coord: 70..167 score: 3.7
IPR008972	Cupredoxin	unknown	SSF49503	Cupredoxins	coord: 67..167 score: 2.78
None	No IPR available	PANTHER	PTHR34192	FAMILY NOT NAMED	coord: 1..167 score: 3.1
None	No IPR available	PANTHER	PTHR34192:SF2	PLASTOCYANIN MAJOR ISOFORM, CHLOROPLASTIC-RELATED	coord: 1..167 score: 3.1