CmaCh02G011160.1 (mRNA) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh02G011160.1
Type	mRNA
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Nuclear migration nudC
Location	Cma_Chr02 : 6626738 .. 6631126 (-)
Sequence length	1045

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TCGGAAATTTCACCCATAAACCCTCAACCTGTTGGACCGATTATCACCCGCGATCTAGCGATTCTGCCAGCTTCTGCCCGCCATGGCGATTATCTCTGAATACGAAGAAAAGGAAGAAATCCCAAAGCCGAAGAAGCCTTCCTCCTCCTCCTCATCTCCACCGTCGTCTTCATCATCTAAGCCCTCTCAGTTCAGTGCAAACTTTGACCCTTCAAACCCTCTAGGGTTTTTAAACGAGGTTTTCGATTTTCTTGCCAAGGAGAGCGATTTTCTCTCCAGGGATAGAGTCGAGAAGGAAATCGAGACGGTAGTGCGTAGAGCTGTGGAGAAGAGAAAGAAGCACGTGGAATCACTTGAGCTTAAAGGAAAGGCCGAGAAGAGGATCAAGGAAGAGGTGGGGAGTGTGAAGCAGGAAGCTGCGCCGGTGACTGTAAAGCAGGATCCGAGGAATGTGGCATCACCGCCAGAAGAGAAGGTGGATGTGAAGTTGGAGGAGAGCACCGAGGAGAAGAAAGAGGAGAATGGTCCAAGAGGTGAGCTTTCTTTTATCCCCATCCCTTTCCTCTACTTGTTCGTTCTTCATTTTGTCAATTTTTTTTTTAACTAACTGTCAATGATGTAGCCAACTGGCAAGGTTTTTAGCAATTAGACTGATAAAGTTGGCATTTTGATGTAGAATTATTGGTAGTAGTTTATGGTTCTTTGTTTGAATAATTAATGGCTTTAGTTTGTAGTTAGCTAGTTTTTACTTGGATATCAGGTTGTAGATTAATCCATTGATCCTCCATAAATTGAAAGTAGAGCTCTCCTGAGTTAGTTTTAGCTTCAGTCCCTTTAGGTACGTGTATTTCTTTGAGCGTGGTGATTGACTTTTAAGTTTCGAATTAAAGTATTTGGAGTTCACAAGTCGTGATTAACTTTTGTTGAAAATTTTGTATGGAAAATATGACTGCTCTCTGGGATGTGGAGCATAAATTTTATCCTCTTGAGTCGAGCATTATATTCTCTTCATGCAGTTTGATAGTTTTTGTCTTCTCTTTTGATAATGAATTTGCAGAAGATATCTAGAATTCCACTGGAATTTGGAACTCAGTATGAGGCTTACCCTATCAAATTTATGAAATATATCGTTGTTTCCTTGTGAGTTCAACTGCCTGACTGACCCTTTAATGATTATGGTTGTTCAAGTAACTTTGCCAAAGTAGTGTTCCCACCCCCCACCCGACGCCTTTATGCACATGGGAATATAGTATGTTTCTATACTAAATGTTGCCTTGAACTTTGTTTCTTACTTGTGGCATTGCAGTTCCCAACAATGGTAATGGCCTTGATATGGAAAACTACTGTTGGACACAGAGTCTCCAAGAGGTCAACATTAATGTACCAGTACCCAAAGGAACTAAGTCCAGGTTTGTGGTGTGTGAGATCAAGAAGAATCATCTCAAAGTTGGACTAAAGGGTCAACCACCAGTGATAGATGTATGTTTGTTTGAAGCTGCTTGTTTCTGTTTCAGATATATTTGCAGTGTGTTAATTTTTTTTTTTTTTCAAGTTCTGAATTATTGTCACATGCTTGCAGGGAGAGCTTTATCAGATTGTTAAGCCAGATGATTGTTATTGGAGCATAGGTATTTCTGGGGTTTTGTTCACATAATAACAGTTCAAATAATCTTAAATTTTGTTATAAATATGGATTATCTTGATGTTGCTCAAGTCCTTGGAAATAGATGATAACATAAATAGGAAGGGATGCATTGAGGTAGTTGAAACCAGTTCCTTGTGTTCACCTGGGTATCAAAGTTACTGTTCTAACTATTTTTTGATGTTCCTTGTTTTATTTTGATACTTGTTGCAGAGGATCAGAGCGTCATCTCTATTCTATTGACCAAGCACAACCAAATGGAGTGGTGGAAGTATTTAATTAAGGGGGAACCTGAGATTGATACTCAGAAGGTTGAACCTGAGAACAGCAAACTGTCTGATTTGGATCCAGAGACACGGCAAACAGTTGAAAAGATGATGGTTTGTATTTTGATCATCTATATTTTATCTATTACACTTATGATTTATTTGTATCAAGGTTTTCCTCGACATATACTCACGTGTTGTTTTTCTATTTCTTCTGCATAAAAATTGCATTTAAATGTGCACAAATATGTAAAAAGAAAAAGCACGTTCTCAAATTTGATGTGGGAGGATAATTCATGAAGCACTTTTTCATACACTTCCATAGGTTATTATAAAAAGCTTATAAAAAGCATAAAAATCTATTCGCTCCCATTAGTAGTTTACAGAAAAATAGAAATCAAACTAAATGTGAACTGCATTGGGAGTATAGTCAGAATTTGTGACTATTTCATAATGACTGTTTCAATGAGACCAAATGAAAGAATGCTTAGGCTTAAAAAAACCAAGCCACCCACAAAAGGGAACCCACTGAAGGAAGGAGCTTCAACTTCAAGGATAAGGAGTCCGACATTAGTATTGTTTATTTTTATTTATTTTTTATTTTTTTATTTTTTGAAACAAGTACTTTTTATTGCATTAGTGAAAAGTCATTAGTATTGTTTATAGACTCCAGCTAGGAGTTCACTAGAACCACCCCAATAAATGTGAATTCCTTCAGAAGTATGGTCACACGATCACAGGAAGAACTTGAAATCCACACCAAAAGGATAAATTGCATTTTGATTAGTCTATCATCTCCTCTACATATCAACACTTCCCTTCAATTTCTCAGATTTCTGACCCCTGGAAAGAAGGAATATCCTTCTTCTAGGATCTAGGTAGATGACTTGACTACTGGTGGAAGTATATTTGTAGAAACTCTACCAAGAGAGCACCACTTTGATACCAATTTGCCCTTAAAACCTGAAAATTTGTTGGCCATATCATTAAACTTCTATCAGTTCTTTCAGTCCATATTGCCTGAACAATTCAAGGATTTACTTGACTGGGAAAACGACTACATGAATATCTTAATCTTTTTAGGAGCCTTGTATTCTTATAGTTTTTTGGTCACAACTCATAACTCTAGGAATAACCTCCGATCGAAGGAAGATGTTGAACTTACAACTAGGTGACAATAGCCAAAAGATTTGTACTTTTAAACCCTCTCCGTTCCTCTTATAGTGGATTATTAACTTCAAAGTTATTTTACTGCTGGTGAGGGAATGAAGTTCAGGAAACTTGGCAAGATGTGTTGTTCAACCTAGTCCGCTGAAATCTAATTCTCCTCCCCATTCTGAAGGAAGGTGAAGTCTCAAGTACGTTCTTACTATGAGTTATGGAACTCAAGCTACTTTGTAATAGAAACCAAATATATTGAAATATATAAGGTAACAATATTACAATAAAACCACCAAGTAAGTTGAGACACTTGAATCTCCTCTCTCTTCAGATACCTCTTAAGCTCAGACTCACTAAACAATTTCTTACCTGCCTCCTTTTCCACCCCCTACTTTTATATCAAATCACCCTAACCATGCCCCTAACTAATTAGTAATATATCCGTAAACTCTAAGAATAGCGCCACTTTCATCCTAATATCATTCCTATGACTTGGCAAACTACTACTTGCATGCCTAGTTTGGCAGTATTTCCAACCATAGTCATCATCTTACCCCCAAAGCTCAACTGTGTGTAGCAATGGCACTAAGAATTAGTTTCTCCTCCAAACCACCACACCTTGTAAGCTGTAGTTGTAGCTTTGATGTTGTTTCTATACCAAGAGACCCCCTTTAAAGTTGAAATGGAGTCAAGGACAAATTTTCAGTTTTCCTGACTCACTCAATTATTGAAACTTCAAATCAGGCCCCTTCCTCGTGGAATTCCTCAAAAATTTCTCAATGGGTACGCCCTCGTTTTTAGATATAATAGGACATTTGTAAAGGGATGCTGATGATGCTAATAAATTCATGTTCATGAGGAAAATTTTATTTTATGATTGATCTATTAATTTCTTCAAATTATATACGTTTCCTGCAGACACCTTTGAATAAATCTAGACCTATGCCTGATTATGCTTTCTGGACTCCTGGCATTCAATGATTTTTTAAGTACATTCTTTGGTGGCATATTCTTATGCATTGTTGGGTACGGTCACATAGTTTATATATATATATAAGAAACCAAATATCAATTCATTTTTCCTGATCGATTTGGAAAAATTTTACAGTTTGATCAAAGGCAGAAGTCTATGGGACTCCCAACCAGTGATGAGATGCAAAAGCAAGATATTCTGAAGAAGTTCATGGCTGAGGTGATTATTTGAGCTGTGTCCCTGTATATGTTTGTGGTTTATAATATCTATTGCTTCTCTCTACTGACTCTGAAATTGATCCTATGCAGCATCCGGAGATGGATTTTTCGAGGGCAAAGATATCATAA

mRNA sequence

TCGGAAATTTCACCCATAAACCCTCAACCTGTTGGACCGATTATCACCCGCGATCTAGCGATTCTGCCAGCTTCTGCCCGCCATGGCGATTATCTCTGAATACGAAGAAAAGGAAGAAATCCCAAAGCCGAAGAAGCCTTCCTCCTCCTCCTCATCTCCACCGTCGTCTTCATCATCTAAGCCCTCTCAGTTCAGTGCAAACTTTGACCCTTCAAACCCTCTAGGGTTTTTAAACGAGGTTTTCGATTTTCTTGCCAAGGAGAGCGATTTTCTCTCCAGGGATAGAGTCGAGAAGGAAATCGAGACGGTAGTGCGTAGAGCTGTGGAGAAGAGAAAGAAGCACGTGGAATCACTTGAGCTTAAAGGAAAGGCCGAGAAGAGGATCAAGGAAGAGGTGGGGAGTGTGAAGCAGGAAGCTGCGCCGGTGACTGTAAAGCAGGATCCGAGGAATGTGGCATCACCGCCAGAAGAGAAGGTGGATGTGAAGTTGGAGGAGAGCACCGAGGAGAAGAAAGAGGAGAATGGTCCAAGAGTTCCCAACAATGGTAATGGCCTTGATATGGAAAACTACTGTTGGACACAGAGTCTCCAAGAGGTCAACATTAATGTACCAGTACCCAAAGGAACTAAGTCCAGGTTTGTGGTGTGTGAGATCAAGAAGAATCATCTCAAAGTTGGACTAAAGGGTCAACCACCAGTGATAGATGGAGAGCTTTATCAGATTGTTAAGCCAGATGATTGTTATTGGAGCATAGAGGATCAGAGCGTCATCTCTATTCTATTGACCAAGCACAACCAAATGGAGTGGTGGAAGTATTTAATTAAGGGGGAACCTGAGATTGATACTCAGAAGGTTGAACCTGAGAACAGCAAACTGTCTGATTTGGATCCAGAGACACGGCAAACAGTTGAAAAGATGATGTTTGATCAAAGGCAGAAGTCTATGGGACTCCCAACCAGTGATGAGATGCAAAAGCAAGATATTCTGAAGAAGTTCATGGCTGAGCATCCGGAGATGGATTTTTCGAGGGCAAAGATATCATAA

Coding sequence (CDS)

ATGGCGATTATCTCTGAATACGAAGAAAAGGAAGAAATCCCAAAGCCGAAGAAGCCTTCCTCCTCCTCCTCATCTCCACCGTCGTCTTCATCATCTAAGCCCTCTCAGTTCAGTGCAAACTTTGACCCTTCAAACCCTCTAGGGTTTTTAAACGAGGTTTTCGATTTTCTTGCCAAGGAGAGCGATTTTCTCTCCAGGGATAGAGTCGAGAAGGAAATCGAGACGGTAGTGCGTAGAGCTGTGGAGAAGAGAAAGAAGCACGTGGAATCACTTGAGCTTAAAGGAAAGGCCGAGAAGAGGATCAAGGAAGAGGTGGGGAGTGTGAAGCAGGAAGCTGCGCCGGTGACTGTAAAGCAGGATCCGAGGAATGTGGCATCACCGCCAGAAGAGAAGGTGGATGTGAAGTTGGAGGAGAGCACCGAGGAGAAGAAAGAGGAGAATGGTCCAAGAGTTCCCAACAATGGTAATGGCCTTGATATGGAAAACTACTGTTGGACACAGAGTCTCCAAGAGGTCAACATTAATGTACCAGTACCCAAAGGAACTAAGTCCAGGTTTGTGGTGTGTGAGATCAAGAAGAATCATCTCAAAGTTGGACTAAAGGGTCAACCACCAGTGATAGATGGAGAGCTTTATCAGATTGTTAAGCCAGATGATTGTTATTGGAGCATAGAGGATCAGAGCGTCATCTCTATTCTATTGACCAAGCACAACCAAATGGAGTGGTGGAAGTATTTAATTAAGGGGGAACCTGAGATTGATACTCAGAAGGTTGAACCTGAGAACAGCAAACTGTCTGATTTGGATCCAGAGACACGGCAAACAGTTGAAAAGATGATGTTTGATCAAAGGCAGAAGTCTATGGGACTCCCAACCAGTGATGAGATGCAAAAGCAAGATATTCTGAAGAAGTTCATGGCTGAGCATCCGGAGATGGATTTTTCGAGGGCAAAGATATCATAA

Protein sequence

MAIISEYEEKEEIPKPKKPSSSSSSPPSSSSSKPSQFSANFDPSNPLGFLNEVFDFLAKESDFLSRDRVEKEIETVVRRAVEKRKKHVESLELKGKAEKRIKEEVGSVKQEAAPVTVKQDPRNVASPPEEKVDVKLEESTEEKKEENGPRVPNNGNGLDMENYCWTQSLQEVNINVPVPKGTKSRFVVCEIKKNHLKVGLKGQPPVIDGELYQIVKPDDCYWSIEDQSVISILLTKHNQMEWWKYLIKGEPEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLPTSDEMQKQDILKKFMAEHPEMDFSRAKIS

Homology

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BLAST of CmaCh02G011160.1 vs. Swiss-Prot
Match: BOB1_ARATH (Protein BOBBER 1 OS=Arabidopsis thaliana GN=BOB1 PE=1 SV=1)

HSP 1 Score: 339.7 bits (870), Expect = 3.4e-92
Identity = 193/326 (59.20%), Postives = 229/326 (70.25%), Query Frame = 1


Query: 1   MAIISEYEEKEEIPKPKKPSSSSSSPPSSSSSKPS--QFSANFDPSNPLGFLNEVFDFLA 60
           MAIISE EE+                  SSSS+P    F A    +NPLGFL +VFDFL 
Sbjct: 1   MAIISEVEEE------------------SSSSRPMIFPFRATLSSANPLGFLEKVFDFLG 60

Query: 61  KESDFLSRDRVEKEIETVVRRAVEK----RKKHVESLELKGKAEKRIKEEVGSVKQEAAP 120
           ++SDFL +   E EI   VR A EK     KK  E   +K   +K  KE V  V+++   
Sbjct: 61  EQSDFLKKPSAEDEIVVAVRAAKEKLKKAEKKKAEKESVKPVEKKAEKEIVKLVEKKVEK 120

Query: 121 VTVKQDPRNVASPPEEKVDVKLEESTEEKKEENGPRVPNNGNGLDMENYCWTQSLQEVNI 180
            +VK     +A+   E ++V+  +  EEKKE +GP VPN GNG D+ENY W Q+LQEV +
Sbjct: 121 ESVKP---TIAASSAEPIEVEKPKEEEEKKE-SGPIVPNKGNGTDLENYSWIQNLQEVTV 180

Query: 181 NVPVPKGTKSRFVVCEIKKNHLKVGLKGQPPVIDGELYQIVKPDDCYWSIEDQSVISILL 240
           N+PVP GTK+R VVCEIKKN LKVGLKGQ P++DGELY+ VKPDDCYW+IEDQ VISILL
Sbjct: 181 NIPVPTGTKARTVVCEIKKNRLKVGLKGQDPIVDGELYRSVKPDDCYWNIEDQKVISILL 240

Query: 241 TKHNQMEWWKYLIKGEPEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLPTSD 300
           TK +QMEWWK  +KGEPEIDTQKVEPE SKL DLDPETR TVEKMMFDQRQK MGLPTS+
Sbjct: 241 TKSDQMEWWKCCVKGEPEIDTQKVEPETSKLGDLDPETRSTVEKMMFDQRQKQMGLPTSE 300

Query: 301 EMQKQDILKKFMAEHPEMDFSRAKIS 321
           E+QKQ+ILKKFM+EHPEMDFS AK +
Sbjct: 301 ELQKQEILKKFMSEHPEMDFSNAKFN 304

[Close]

BLAST of CmaCh02G011160.1 vs. Swiss-Prot
Match: BOB2_ARATH (Protein BOBBER 2 OS=Arabidopsis thaliana GN=BOB2 PE=2 SV=1)

HSP 1 Score: 312.4 bits (799), Expect = 5.8e-84
Identity = 177/324 (54.63%), Postives = 219/324 (67.59%), Query Frame = 1


Query: 1   MAIISEYEEKEEIPKPKKPSSSSSSPPSSSSSKPSQFSANFDPSNPLGFLNEVFDFLAKE 60
           MAIISE EE      P                    F+A+FDPSNP+ FL +V D + KE
Sbjct: 1   MAIISEMEEARPSMVP--------------------FTASFDPSNPIAFLEKVLDVIGKE 60

Query: 61  SDFLSRDRVEKEIETVVRRAVEKRKKHVESLELKGKAEKRIKEEVGSVKQEAAPVTVKQD 120
           S+FL +D  EKEI   V  A ++R +  E  +L+       KE V S++ E  P      
Sbjct: 61  SNFLKKDTAEKEIVAAVM-AAKQRLREAEKKKLE-------KESVKSMEVEK-PKKDSLK 120

Query: 121 PRNVASPPEEKV----DVKLEESTEEKKEENGPRVPNNGNGLDMENYCWTQSLQEVNINV 180
           P  +  P EE +     +++E+  EEK  E+GP VPN GNGLD E Y W Q+LQEV IN+
Sbjct: 121 PTELEKPKEESLMATDPMEIEKPKEEK--ESGPIVPNKGNGLDFEKYSWGQNLQEVTINI 180

Query: 181 PVPKGTKSRFVVCEIKKNHLKVGLKGQPPVIDGELYQIVKPDDCYWSIEDQSVISILLTK 240
           P+P+GTKSR V CEIKKN LKVGLKGQ  ++DGE +  VKPDDC+W+IEDQ +IS+LLTK
Sbjct: 181 PMPEGTKSRSVTCEIKKNRLKVGLKGQDLIVDGEFFNSVKPDDCFWNIEDQKMISVLLTK 240

Query: 241 HNQMEWWKYLIKGEPEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLPTSDEM 300
            +QMEWWKY +KGEPEIDTQKVEPE SKL DLDPETR +VEKMMFDQRQK MGLP SDE+
Sbjct: 241 QDQMEWWKYCVKGEPEIDTQKVEPETSKLGDLDPETRASVEKMMFDQRQKQMGLPRSDEI 293

Query: 301 QKQDILKKFMAEHPEMDFSRAKIS 321
           +K+D+LKKFMA++P MDFS AK +
Sbjct: 301 EKKDMLKKFMAQNPGMDFSNAKFN 293

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BLAST of CmaCh02G011160.1 vs. Swiss-Prot
Match: NUDC_MOUSE (Nuclear migration protein nudC OS=Mus musculus GN=Nudc PE=1 SV=1)

HSP 1 Score: 215.3 bits (547), Expect = 9.6e-55
Identity = 121/253 (47.83%), Postives = 164/253 (64.82%), Query Frame = 1


Query: 70  EKEIETVVRRAVEKRKKHVESLELKGKAEKRIKEEVGSVKQEAAPVTVKQDPRNVASPPE 129
           E + ET   +  E   +  E L+L+   +K  +++   +K  +     KQD         
Sbjct: 94  EAKAETPGPQIKELTDEEAERLQLEIDQKKDAEDQEAQLKNGSLDSPGKQDAE------- 153

Query: 130 EKVDVKLEESTEEKKEENGPRVPNNGNGLDMENYCWTQSLQEVNINVP--VPKGTKSRFV 189
                  +E  EE +++ G   PN GNG D+ NY WTQ+L E+++ VP  V    K + V
Sbjct: 154 -------DEEDEEDEKDKGKLKPNLGNGADLPNYRWTQTLAELDLAVPFRVSFRLKGKDV 213

Query: 190 VCEIKKNHLKVGLKGQPPVIDGELYQIVKPDDCYWSIEDQSVISILLTKHNQMEWWKYLI 249
           V +I++ HL+VGLKGQPPV+DGELY  VK ++  W IED  V+++ L K N+MEWW  L+
Sbjct: 214 VVDIQRRHLRVGLKGQPPVVDGELYNEVKVEESSWLIEDGKVVTVHLEKINKMEWWNRLV 273

Query: 250 KGEPEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLPTSDEMQKQDILKKFMA 309
             +PEI+T+K+ PENSKLSDLD ETR  VEKMM+DQRQKSMGLPTSDE +KQ+ILKKFM 
Sbjct: 274 TSDPEINTKKINPENSKLSDLDSETRSMVEKMMYDQRQKSMGLPTSDEQKKQEILKKFMD 332

Query: 310 EHPEMDFSRAKIS 321
           +HPEMDFS+AK +
Sbjct: 334 QHPEMDFSKAKFN 332

[Close]

BLAST of CmaCh02G011160.1 vs. Swiss-Prot
Match: NUDC_CHICK (Nuclear migration protein nudC OS=Gallus gallus GN=NUDC PE=2 SV=1)

HSP 1 Score: 213.8 bits (543), Expect = 2.8e-54
Identity = 135/311 (43.41%), Postives = 187/311 (60.13%), Query Frame = 1


Query: 50  LNEVFDFLAKESDFLS--RDRVEKEI-----------------ETVVRRAVEKRKKHVES 109
           +N  F FL +++DF +   D V +++                 E   R+  E+R+K   +
Sbjct: 34  VNTFFSFLRRKTDFFTGGEDGVAEKLITDSFNHHNKLAQKERKEKKARQEAERREKAERA 93

Query: 110 LELKGKA-----EKRIKEEVGSVKQEAAPVTVKQDPRNVASPPEEKVDVKL--------- 169
            +L  +A     E RIKE      +EA  + ++ D +  A      V VK          
Sbjct: 94  AKLAKEAKQEANEPRIKE---LTDEEAERLQLEIDQKKEAQKEVNNVPVKSSEDDGDSSD 153

Query: 170 ---EESTEEKKEEN--GPRVPNNGNGLDMENYCWTQSLQEVNINVP--VPKGTKSRFVVC 229
              +E+ +E+K+EN  G   PN GNG D+ NY WTQ+L E+++ +P  V    K + VV 
Sbjct: 154 SNKQETDDEEKDENDKGKLKPNAGNGADLPNYRWTQTLSELDLAIPFKVTFRLKGKDVVV 213

Query: 230 EIKKNHLKVGLKGQPPVIDGELYQIVKPDDCYWSIEDQSVISILLTKHNQMEWWKYLIKG 289
           +I++  L+VGLKG PPVIDGEL+  VK ++  W IED   +++ L K N+MEWW  L+  
Sbjct: 214 DIQRRRLRVGLKGHPPVIDGELFNEVKVEESSWLIEDGKTVTVHLEKINKMEWWNKLVST 273

Query: 290 EPEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLPTSDEMQKQDILKKFMAEH 321
           +PEI+T+K+ PENSKLSDLD ETR  VEKMM+DQRQKSMGLPTSDE +KQDILKKFM +H
Sbjct: 274 DPEINTKKINPENSKLSDLDSETRSMVEKMMYDQRQKSMGLPTSDEQKKQDILKKFMEQH 333

[Close]

BLAST of CmaCh02G011160.1 vs. Swiss-Prot
Match: NUDC_RAT (Nuclear migration protein nudC OS=Rattus norvegicus GN=Nudc PE=1 SV=1)

HSP 1 Score: 212.2 bits (539), Expect = 8.2e-54
Identity = 128/272 (47.06%), Postives = 175/272 (64.34%), Query Frame = 1


Query: 57  LAKESDFLSRDRVEKEIETVVRRAVEKRKKHVESL------ELKGKAEKRIKEEVGSVKQ 116
           LA+++    R R E E      RA    K+           EL  +  +R++ E+   K+
Sbjct: 65  LAQKARREKRARQETERREKAERAARLAKEAKAETPGPQIKELTDEEAERLQLEIDQ-KK 124

Query: 117 EAAPVTVKQDPRNVASPPEEKVDVKLEESTEEKKEENGPRVPNNGNGLDMENYCWTQSLQ 176
           +A    V+    ++ SP ++  +   EE  EE +++ G   PN GNG D+ NY WTQ+L 
Sbjct: 125 DAENHEVQLKNGSLDSPGKQDAE---EEEDEEDEKDKGKLKPNLGNGADLPNYRWTQTLS 184

Query: 177 EVNINVP--VPKGTKSRFVVCEIKKNHLKVGLKGQPPVIDGELYQIVKPDDCYWSIEDQS 236
           E+++ VP  V    K + VV +I++ HL+VGLKGQ PVIDGELY  VK ++  W IED  
Sbjct: 185 ELDLAVPFRVSFRLKGKDVVVDIQRRHLRVGLKGQAPVIDGELYNEVKVEESSWLIEDGK 244

Query: 237 VISILLTKHNQMEWWKYLIKGEPEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSM 296
           V+++ L K N+MEWW  L+  +PEI+T+K+ PENSKLSDLD ETR  VEKMM+DQRQKSM
Sbjct: 245 VVTVHLEKINKMEWWNRLVTSDPEINTKKINPENSKLSDLDSETRSMVEKMMYDQRQKSM 304

Query: 297 GLPTSDEMQKQDILKKFMAEHPEMDFSRAKIS 321
           GLPTSDE +KQ+ILKKFM +HPEMDFS+AK +
Sbjct: 305 GLPTSDEQKKQEILKKFMDQHPEMDFSKAKFN 332

[Close]

BLAST of CmaCh02G011160.1 vs. TrEMBL
Match: A0A0A0KQ62_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G139440 PE=4 SV=1)

HSP 1 Score: 525.8 bits (1353), Expect = 3.7e-146
Identity = 278/321 (86.60%), Postives = 297/321 (92.52%), Query Frame = 1


Query: 1   MAIISEYEEKEEIPKPKKPSSSSSSPPSSSSS-KPSQFSANFDPSNPLGFLNEVFDFLAK 60
           MAIIS+YEEKEEIPKPKKPSSSSSS PSSSSS KPSQF+A+FDPSNPLGFL +VFDFLA 
Sbjct: 1   MAIISDYEEKEEIPKPKKPSSSSSSSPSSSSSPKPSQFNASFDPSNPLGFLEKVFDFLAN 60

Query: 61  ESDFLSRDRVEKEIETVVRRAVEKRKKHVESLELKGKAEKRIKEEVGSVKQEAAPVTVKQ 120
           E+DFLS+DRVEK+IETVVRRAVEKRKKH ESLELKGKAEKRIKEEV SVK+EAAPV    
Sbjct: 61  ETDFLSKDRVEKDIETVVRRAVEKRKKHDESLELKGKAEKRIKEEVKSVKEEAAPV---- 120

Query: 121 DPRNVASPPEEKVDVKLEESTEEKKEENGPRVPNNGNGLDMENYCWTQSLQEVNINVPVP 180
             +  ASPPEEKV  KLEE+TEEKKEENG RVPN GNGLDM+NY WTQSLQEVN+NVPVP
Sbjct: 121 --KAAASPPEEKVGEKLEENTEEKKEENGARVPNKGNGLDMDNYSWTQSLQEVNVNVPVP 180

Query: 181 KGTKSRFVVCEIKKNHLKVGLKGQPPVIDGELYQIVKPDDCYWSIEDQSVISILLTKHNQ 240
           KGTKSRFVVCEIKKN LKVGLKGQPPVID EL   VKPDDCYWSIED+S++SILLTKHNQ
Sbjct: 181 KGTKSRFVVCEIKKNRLKVGLKGQPPVIDAELCHTVKPDDCYWSIEDESIVSILLTKHNQ 240

Query: 241 MEWWKYLIKGEPEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLPTSDEMQKQ 300
           MEWWKYL+KG+PEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLPTSDEMQKQ
Sbjct: 241 MEWWKYLVKGDPEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLPTSDEMQKQ 300

Query: 301 DILKKFMAEHPEMDFSRAKIS 321
           +ILKKFM+EHPEMDFSRAKIS
Sbjct: 301 EILKKFMSEHPEMDFSRAKIS 315

[Close]

BLAST of CmaCh02G011160.1 vs. TrEMBL
Match: A0A151TS61_CAJCA (Nuclear migration protein nudC OS=Cajanus cajan GN=KK1_009103 PE=4 SV=1)

HSP 1 Score: 383.6 bits (984), Expect = 2.3e-103
Identity = 202/320 (63.12%), Postives = 249/320 (77.81%), Query Frame = 1


Query: 1   MAIISEYEEKEEIPKPKKPSSSSSSPPSSSSSKPSQFSANFDPSNPLGFLNEVFDFLAKE 60
           MAIISE+ E++  P P +P  S S         PS F+A FD SNPL FLN VF+F+A+E
Sbjct: 1   MAIISEFNEEDPKPSPSQPQPSPS---------PSSFTAPFDRSNPLAFLNRVFEFVAQE 60

Query: 61  SDFLSRDRVEKEIETVVRRAVEKRKKHVESLELKGKAEKRIKEEVGSVKQEAAPVTVKQD 120
           +DFL  D  E++I ++VR A +K++  + + E + KAEK+ +EE+ +           Q+
Sbjct: 61  TDFLVSDAAERQIVSLVRAAGKKKRDELRATEEREKAEKKKREELKAT----------QE 120

Query: 121 PRNVASPPEEKVDVKLEESTEEKKEENGPRVPNNGNGLDMENYCWTQSLQEVNINVPVPK 180
              V    +E+ ++K E +    K+E   +VPN GNG+D+E Y WTQ+LQEVN+NVPVPK
Sbjct: 121 RERVEKRLKEEKNLKAENTD---KDETASKVPNKGNGMDLEGYSWTQTLQEVNVNVPVPK 180

Query: 181 GTKSRFVVCEIKKNHLKVGLKGQPPVIDGELYQIVKPDDCYWSIEDQSVISILLTKHNQM 240
           GTKSRFV+CEIKKNHLKVGLKGQPP+I+GELY+ VKPDDCYWSIEDQS +SILLTKH+QM
Sbjct: 181 GTKSRFVICEIKKNHLKVGLKGQPPIIEGELYRSVKPDDCYWSIEDQSALSILLTKHDQM 240

Query: 241 EWWKYLIKGEPEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLPTSDEMQKQD 300
           EWWK L+KG+PEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLPTSDE+QKQ+
Sbjct: 241 EWWKCLVKGDPEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLPTSDELQKQE 298

Query: 301 ILKKFMAEHPEMDFSRAKIS 321
           ILKKFM+EHPEMDFSRAK+S
Sbjct: 301 ILKKFMSEHPEMDFSRAKLS 298

[Close]

BLAST of CmaCh02G011160.1 vs. TrEMBL
Match: A0A061G2U6_THECC (HSP20-like chaperones superfamily protein isoform 1 OS=Theobroma cacao GN=TCM_015401 PE=4 SV=1)

HSP 1 Score: 380.6 bits (976), Expect = 1.9e-102
Identity = 204/319 (63.95%), Postives = 246/319 (77.12%), Query Frame = 1


Query: 1   MAIISEYEEKEEIPKPKKPSSSSSSPPSSSSSKPSQFSANFDPSNPLGFLNEVFDFLAKE 60
           MAIIS+Y+E+E      KPS+SSS P      KP  F+A+ DPSNP+GFL +VFDFL KE
Sbjct: 1   MAIISDYQEEEA-----KPSTSSSQP-----RKPVSFNASLDPSNPVGFLEKVFDFLGKE 60

Query: 61  SDFLSRDRVEKEIETVVRRAVEKRKKHVESLELKGKAEKRIKEEVGSVKQEAAPVTVKQD 120
           +D L ++ V+KEI  +VR A EK +K VE +  K + +K+  +E   +K+E         
Sbjct: 61  TDLLRKENVDKEIAAMVRVAKEKSEKKVEEVAPKVELKKKEVKEENEIKKEVN------- 120

Query: 121 PRNVASPPEEKVDVKLEESTEEKKEENGPRVPNNGNGLDMENYCWTQSLQEVNINVPVPK 180
                   +E +D+  ++  +E++  +G RVPN GNGLD+E Y WTQ+LQEV +NVPVP 
Sbjct: 121 --------KEAMDLDKKDDKKEEETSSGLRVPNKGNGLDLEKYSWTQTLQEVTVNVPVPS 180

Query: 181 GTKSRFVVCEIKKNHLKVGLKGQPPVIDGELYQIVKPDDCYWSIEDQSVISILLTKHNQM 240
           GT+SRFVVCEIKKNHLKVGLKGQPPVIDGEL Q VKPDDCYWSIED   +SILLTKHNQM
Sbjct: 181 GTRSRFVVCEIKKNHLKVGLKGQPPVIDGELLQSVKPDDCYWSIEDNCSLSILLTKHNQM 240

Query: 241 EWWKYLIKGEPEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLPTSDEMQKQD 300
           EWWK L+KG+PEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQK+MGLPTSDE+QKQ+
Sbjct: 241 EWWKSLVKGDPEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKAMGLPTSDELQKQE 294

Query: 301 ILKKFMAEHPEMDFSRAKI 320
           ILKKFM+EHPEMDFSRAK+
Sbjct: 301 ILKKFMSEHPEMDFSRAKL 294

[Close]

BLAST of CmaCh02G011160.1 vs. TrEMBL
Match: A0A059DEY7_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_A01460 PE=4 SV=1)

HSP 1 Score: 378.3 bits (970), Expect = 9.6e-102
Identity = 208/326 (63.80%), Postives = 261/326 (80.06%), Query Frame = 1


Query: 1   MAIISEYEEKEEIPKP--KKPSSSS--SSPPSSSSSKPSQFSANFDPSNPLGFLNEVFDF 60
           MAIIS+Y+E+EE  +P  KKP+++S  SS  S+S+S  ++FSA FDPS+PLGFL +VF+F
Sbjct: 89  MAIISDYQEEEEQRQPGAKKPAAASAASSSSSASASAAAEFSARFDPSSPLGFLEKVFEF 148

Query: 61  LAKESDFLSRDRVEKEIETVVRRAVEKRKKHVESLELKGKAEK-RIKEEVGSVKQEAAPV 120
           +A+ SDFL+ +  E ++  VVR + EK+K+  +   ++ + E+ R + EV +    AA  
Sbjct: 149 VAERSDFLAHEAAEGDVAAVVRASREKQKQKQKQKAMQVEKERERARAEVEAAAAAAAAA 208

Query: 121 TVKQDPRNVASPPEEKVD-VKLEESTEEKKEENGPRVPNNGNGLDMENYCWTQSLQEVNI 180
             K+         E KV+ V+++++ EEKK  +G  VPN GNGLD+E Y WTQ+LQEV +
Sbjct: 209 AKKKKVDE-----ERKVEEVEMKDAEEEKK--SGAIVPNKGNGLDLEKYSWTQTLQEVTV 268

Query: 181 NVPVPKGTKSRFVVCEIKKNHLKVGLKGQPPVIDGELYQIVKPDDCYWSIEDQSVISILL 240
            VPVPKGTK RFVVC+IKKNH+KVGLKGQPPVI+GEL+Q VKPDDCYWS+EDQS +SILL
Sbjct: 269 RVPVPKGTKGRFVVCDIKKNHMKVGLKGQPPVIEGELFQTVKPDDCYWSLEDQSEVSILL 328

Query: 241 TKHNQMEWWKYLIKGEPEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLPTSD 300
           TKHNQMEWWK L+KG+PEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQK+MGLPTSD
Sbjct: 329 TKHNQMEWWKSLVKGDPEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKAMGLPTSD 388

Query: 301 EMQKQDILKKFMAEHPEMDFSRAKIS 321
           EMQKQ++LKKFMAEHPEMDFSRAKI+
Sbjct: 389 EMQKQEVLKKFMAEHPEMDFSRAKIA 407

[Close]

BLAST of CmaCh02G011160.1 vs. TrEMBL
Match: V4TLN9_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10021271mg PE=4 SV=1)

HSP 1 Score: 377.1 bits (967), Expect = 2.1e-101
Identity = 212/330 (64.24%), Postives = 242/330 (73.33%), Query Frame = 1


Query: 1   MAIISEYEEKEEIPKPKKPSSSSSSPPSSSSSKPSQFSANFDPSNPLGFLNEVFDFLAKE 60
           MAIIS+++E E  P PKK  S+S+S  S SS+K S FSA  DPSNPLGFL + F+F+AKE
Sbjct: 1   MAIISDFQEDENKPDPKKNPSASASSSSPSSAKTSSFSATLDPSNPLGFLEKAFEFVAKE 60

Query: 61  SDFLSRDRVEKEIETVVRRAVEK----------RKKHVESLELKGKAEKRIKEEVGSVKQ 120
           SDFL++D  EK+I   +R A EK          +  H E ++ K   E++ +EE    K 
Sbjct: 61  SDFLTKDAAEKQIVAAMRAAKEKSSNTKKQPQPQSPHQEEVKAKKMKEEKKEEE----KF 120

Query: 121 EAAPVTVKQDPRNVASPPEEKVDVKLEESTEEKKEENGPRVPNNGNGLDMENYCWTQSLQ 180
           E  P    Q     A PPE ++D             N  R PN GNGLD+ENY WTQ LQ
Sbjct: 121 EDLPTMKVQK----APPPEPQLDAN----------GNPARAPNKGNGLDLENYSWTQILQ 180

Query: 181 EVNINVPVPKGTKSRFVVCEIKKNHLKVGLKGQPPVIDGELYQIVKPDDCYWSIEDQSVI 240
           EV ++VPVP GTKSRFV+CEIKKNHLKVGLKGQPP+IDGEL+  VKPDDCYWSIEDQ  +
Sbjct: 181 EVTVSVPVPAGTKSRFVLCEIKKNHLKVGLKGQPPIIDGELHMAVKPDDCYWSIEDQKTV 240

Query: 241 SILLTKHNQMEWWKYLIKGEPEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGL 300
           SILLTK NQMEWWK LIKG PEIDTQKVEPENSKLSDLDPETR TVEKMMFDQRQKSMGL
Sbjct: 241 SILLTKQNQMEWWKCLIKGGPEIDTQKVEPENSKLSDLDPETRSTVEKMMFDQRQKSMGL 300

Query: 301 PTSDEMQKQDILKKFMAEHPEMDFSRAKIS 321
           P+SDEMQKQ+ILKKFMAEHPEMDFSRAKIS
Sbjct: 301 PSSDEMQKQEILKKFMAEHPEMDFSRAKIS 312

[Close]

BLAST of CmaCh02G011160.1 vs. TAIR10
Match: AT5G53400.1 (AT5G53400.1 HSP20-like chaperones superfamily protein)

HSP 1 Score: 339.7 bits (870), Expect = 1.9e-93
Identity = 193/326 (59.20%), Postives = 229/326 (70.25%), Query Frame = 1


Query: 1   MAIISEYEEKEEIPKPKKPSSSSSSPPSSSSSKPS--QFSANFDPSNPLGFLNEVFDFLA 60
           MAIISE EE+                  SSSS+P    F A    +NPLGFL +VFDFL 
Sbjct: 1   MAIISEVEEE------------------SSSSRPMIFPFRATLSSANPLGFLEKVFDFLG 60

Query: 61  KESDFLSRDRVEKEIETVVRRAVEK----RKKHVESLELKGKAEKRIKEEVGSVKQEAAP 120
           ++SDFL +   E EI   VR A EK     KK  E   +K   +K  KE V  V+++   
Sbjct: 61  EQSDFLKKPSAEDEIVVAVRAAKEKLKKAEKKKAEKESVKPVEKKAEKEIVKLVEKKVEK 120

Query: 121 VTVKQDPRNVASPPEEKVDVKLEESTEEKKEENGPRVPNNGNGLDMENYCWTQSLQEVNI 180
            +VK     +A+   E ++V+  +  EEKKE +GP VPN GNG D+ENY W Q+LQEV +
Sbjct: 121 ESVKP---TIAASSAEPIEVEKPKEEEEKKE-SGPIVPNKGNGTDLENYSWIQNLQEVTV 180

Query: 181 NVPVPKGTKSRFVVCEIKKNHLKVGLKGQPPVIDGELYQIVKPDDCYWSIEDQSVISILL 240
           N+PVP GTK+R VVCEIKKN LKVGLKGQ P++DGELY+ VKPDDCYW+IEDQ VISILL
Sbjct: 181 NIPVPTGTKARTVVCEIKKNRLKVGLKGQDPIVDGELYRSVKPDDCYWNIEDQKVISILL 240

Query: 241 TKHNQMEWWKYLIKGEPEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLPTSD 300
           TK +QMEWWK  +KGEPEIDTQKVEPE SKL DLDPETR TVEKMMFDQRQK MGLPTS+
Sbjct: 241 TKSDQMEWWKCCVKGEPEIDTQKVEPETSKLGDLDPETRSTVEKMMFDQRQKQMGLPTSE 300

Query: 301 EMQKQDILKKFMAEHPEMDFSRAKIS 321
           E+QKQ+ILKKFM+EHPEMDFS AK +
Sbjct: 301 ELQKQEILKKFMSEHPEMDFSNAKFN 304

[Close]

BLAST of CmaCh02G011160.1 vs. TAIR10
Match: AT4G27890.1 (AT4G27890.1 HSP20-like chaperones superfamily protein)

HSP 1 Score: 312.4 bits (799), Expect = 3.3e-85
Identity = 177/324 (54.63%), Postives = 219/324 (67.59%), Query Frame = 1


Query: 1   MAIISEYEEKEEIPKPKKPSSSSSSPPSSSSSKPSQFSANFDPSNPLGFLNEVFDFLAKE 60
           MAIISE EE      P                    F+A+FDPSNP+ FL +V D + KE
Sbjct: 1   MAIISEMEEARPSMVP--------------------FTASFDPSNPIAFLEKVLDVIGKE 60

Query: 61  SDFLSRDRVEKEIETVVRRAVEKRKKHVESLELKGKAEKRIKEEVGSVKQEAAPVTVKQD 120
           S+FL +D  EKEI   V  A ++R +  E  +L+       KE V S++ E  P      
Sbjct: 61  SNFLKKDTAEKEIVAAVM-AAKQRLREAEKKKLE-------KESVKSMEVEK-PKKDSLK 120

Query: 121 PRNVASPPEEKV----DVKLEESTEEKKEENGPRVPNNGNGLDMENYCWTQSLQEVNINV 180
           P  +  P EE +     +++E+  EEK  E+GP VPN GNGLD E Y W Q+LQEV IN+
Sbjct: 121 PTELEKPKEESLMATDPMEIEKPKEEK--ESGPIVPNKGNGLDFEKYSWGQNLQEVTINI 180

Query: 181 PVPKGTKSRFVVCEIKKNHLKVGLKGQPPVIDGELYQIVKPDDCYWSIEDQSVISILLTK 240
           P+P+GTKSR V CEIKKN LKVGLKGQ  ++DGE +  VKPDDC+W+IEDQ +IS+LLTK
Sbjct: 181 PMPEGTKSRSVTCEIKKNRLKVGLKGQDLIVDGEFFNSVKPDDCFWNIEDQKMISVLLTK 240

Query: 241 HNQMEWWKYLIKGEPEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLPTSDEM 300
            +QMEWWKY +KGEPEIDTQKVEPE SKL DLDPETR +VEKMMFDQRQK MGLP SDE+
Sbjct: 241 QDQMEWWKYCVKGEPEIDTQKVEPETSKLGDLDPETRASVEKMMFDQRQKQMGLPRSDEI 293

Query: 301 QKQDILKKFMAEHPEMDFSRAKIS 321
           +K+D+LKKFMA++P MDFS AK +
Sbjct: 301 EKKDMLKKFMAQNPGMDFSNAKFN 293

[Close]

BLAST of CmaCh02G011160.1 vs. TAIR10
Match: AT5G58740.1 (AT5G58740.1 HSP20-like chaperones superfamily protein)

HSP 1 Score: 71.6 bits (174), Expect = 9.7e-13
Identity = 32/101 (31.68%), Postives = 58/101 (57.43%), Query Frame = 1


Query: 165 WTQSLQEVNINVPVPKGTKSRFVVCEIKKNHLKVGLKGQPPVIDGELYQIVKPDDCYWSI 224
           W Q+L+EVN+ + +P     +   C+I+  H++VG+KG PP ++ +L   VK D  +W++
Sbjct: 23  WDQTLEEVNMYITLPPNVHPKSFHCKIQSKHIEVGIKGNPPYLNHDLSAPVKTDCSFWTL 82

Query: 225 EDQSVISILLTKHNQMEWWKYLIKGEPEIDTQKVEPENSKL 266
           ED  ++ I L K  + + W   I G+ ++D    + E  +L
Sbjct: 83  ED-DIMHITLQKREKGQTWASPILGQGQLDPYATDLEQKRL 122

[Close]

BLAST of CmaCh02G011160.1 vs. TAIR10
Match: AT2G27280.1 (AT2G27280.1 Coiled-coil domain-containing protein 55 (DUF2040))

HSP 1 Score: 53.1 bits (126), Expect = 3.6e-07
Identity = 35/85 (41.18%), Postives = 45/85 (52.94%), Query Frame = 1


Query: 37  FSANFDPSNPLGFLNEVFDFLAKESDFLSRDRVEKEIETVVRRAVEKRKKHVESLELKGK 96
           FSA+F+PSNPLGFL  V DF+ KES+FL +D  EKEI   V  A E+         L+  
Sbjct: 11  FSASFNPSNPLGFLENVLDFIGKESNFLRKDTAEKEITDAVTTAKER---------LRET 70

Query: 97  AEKRIKEEVGSVKQEAAPVTVKQDP 122
            +K    +V  V+    P     DP
Sbjct: 71  EKKTESMDVEKVRPSTLPFNASFDP 86

[Close]

BLAST of CmaCh02G011160.1 vs. NCBI nr
Match: gi|659074420|ref|XP_008437594.1| (PREDICTED: protein BOBBER 1 [Cucumis melo])

HSP 1 Score: 528.5 bits (1360), Expect = 8.2e-147
Identity = 279/320 (87.19%), Postives = 296/320 (92.50%), Query Frame = 1


Query: 1   MAIISEYEEKEEIPKPKKPSSSSSSPPSSSSSKPSQFSANFDPSNPLGFLNEVFDFLAKE 60
           MAIIS+YEEKEEIPKPK+PSSSSS P SSSS+KPSQF+ANFDPSNPLGFL +VFDFLA E
Sbjct: 1   MAIISDYEEKEEIPKPKRPSSSSS-PSSSSSAKPSQFNANFDPSNPLGFLEKVFDFLANE 60

Query: 61  SDFLSRDRVEKEIETVVRRAVEKRKKHVESLELKGKAEKRIKEEVGSVKQEAAPVTVKQD 120
           +DFLS DRVEK+IETVVRRAVEKRKKH ESLELKGKAEKRIKEEV SVKQEAAP      
Sbjct: 61  TDFLSNDRVEKDIETVVRRAVEKRKKHEESLELKGKAEKRIKEEVKSVKQEAAPA----- 120

Query: 121 PRNVASPPEEKVDVKLEESTEEKKEENGPRVPNNGNGLDMENYCWTQSLQEVNINVPVPK 180
            + VASPPEEKV  KLEE TEEKKE+NGPRVPN GNGLDM+NY WTQSLQEVN+NVPVPK
Sbjct: 121 -KAVASPPEEKVGEKLEEVTEEKKEDNGPRVPNKGNGLDMDNYSWTQSLQEVNVNVPVPK 180

Query: 181 GTKSRFVVCEIKKNHLKVGLKGQPPVIDGELYQIVKPDDCYWSIEDQSVISILLTKHNQM 240
           GTKSRFVVCEIKKN LKVGLKGQPPVIDGEL   VKPDDCYWSIED+S+ISILLTKHNQM
Sbjct: 181 GTKSRFVVCEIKKNRLKVGLKGQPPVIDGELCHTVKPDDCYWSIEDESIISILLTKHNQM 240

Query: 241 EWWKYLIKGEPEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLPTSDEMQKQD 300
           EWWKYL+KG+PEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLPTSDEMQKQ+
Sbjct: 241 EWWKYLVKGDPEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLPTSDEMQKQE 300

Query: 301 ILKKFMAEHPEMDFSRAKIS 321
           ILKKFM+EHPEMDFSRAKIS
Sbjct: 301 ILKKFMSEHPEMDFSRAKIS 313

[Close]

BLAST of CmaCh02G011160.1 vs. NCBI nr
Match: gi|778698896|ref|XP_011654620.1| (PREDICTED: protein BOBBER 1 [Cucumis sativus])

HSP 1 Score: 525.8 bits (1353), Expect = 5.3e-146
Identity = 278/321 (86.60%), Postives = 297/321 (92.52%), Query Frame = 1


Query: 1   MAIISEYEEKEEIPKPKKPSSSSSSPPSSSSS-KPSQFSANFDPSNPLGFLNEVFDFLAK 60
           MAIIS+YEEKEEIPKPKKPSSSSSS PSSSSS KPSQF+A+FDPSNPLGFL +VFDFLA 
Sbjct: 1   MAIISDYEEKEEIPKPKKPSSSSSSSPSSSSSPKPSQFNASFDPSNPLGFLEKVFDFLAN 60

Query: 61  ESDFLSRDRVEKEIETVVRRAVEKRKKHVESLELKGKAEKRIKEEVGSVKQEAAPVTVKQ 120
           E+DFLS+DRVEK+IETVVRRAVEKRKKH ESLELKGKAEKRIKEEV SVK+EAAPV    
Sbjct: 61  ETDFLSKDRVEKDIETVVRRAVEKRKKHDESLELKGKAEKRIKEEVKSVKEEAAPV---- 120

Query: 121 DPRNVASPPEEKVDVKLEESTEEKKEENGPRVPNNGNGLDMENYCWTQSLQEVNINVPVP 180
             +  ASPPEEKV  KLEE+TEEKKEENG RVPN GNGLDM+NY WTQSLQEVN+NVPVP
Sbjct: 121 --KAAASPPEEKVGEKLEENTEEKKEENGARVPNKGNGLDMDNYSWTQSLQEVNVNVPVP 180

Query: 181 KGTKSRFVVCEIKKNHLKVGLKGQPPVIDGELYQIVKPDDCYWSIEDQSVISILLTKHNQ 240
           KGTKSRFVVCEIKKN LKVGLKGQPPVID EL   VKPDDCYWSIED+S++SILLTKHNQ
Sbjct: 181 KGTKSRFVVCEIKKNRLKVGLKGQPPVIDAELCHTVKPDDCYWSIEDESIVSILLTKHNQ 240

Query: 241 MEWWKYLIKGEPEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLPTSDEMQKQ 300
           MEWWKYL+KG+PEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLPTSDEMQKQ
Sbjct: 241 MEWWKYLVKGDPEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLPTSDEMQKQ 300

Query: 301 DILKKFMAEHPEMDFSRAKIS 321
           +ILKKFM+EHPEMDFSRAKIS
Sbjct: 301 EILKKFMSEHPEMDFSRAKIS 315

[Close]

BLAST of CmaCh02G011160.1 vs. NCBI nr
Match: gi|1000979057|ref|XP_015571366.1| (PREDICTED: protein BOBBER 1 isoform X2 [Ricinus communis])

HSP 1 Score: 392.5 bits (1007), Expect = 7.0e-106
Identity = 214/321 (66.67%), Postives = 250/321 (77.88%), Query Frame = 1


Query: 1   MAIISEYEEKEEIPKPKKPSSSSSSPPSSSSSKPSQFSANFDPSNPLGFLNEVFDFLAKE 60
           MAIIS+Y+E+E   KP       ++ PSSSSSK   F+A FDP NP+G + +VF+FL  E
Sbjct: 1   MAIISDYQEEEREMKP-------AASPSSSSSKTLPFNATFDPKNPIGIVEKVFEFLLTE 60

Query: 61  SDFLSRDRVEKEIETVVRRAVEKRKKHVESLEL-KGKAEKRIKEEVGSVKQEAAPVTVKQ 120
           SDF++RD  EKEI  VV+ A EK K+     E  K  A K++KEEV +         VKQ
Sbjct: 61  SDFMARDSAEKEIVAVVKAAKEKSKRKTAEAERDKAAALKKVKEEVKA--------EVKQ 120

Query: 121 DPRNVASPPEEKVDVKLEESTEEKKEENGPRVPNNGNGLDMENYCWTQSLQEVNINVPVP 180
           + + V    E K     +E TE +KEE GPRVPN GNGLD+E Y WTQ+LQEVNI VPVP
Sbjct: 121 EKKEVKQEREVK-----QEPTEIEKEETGPRVPNKGNGLDLEKYSWTQTLQEVNIQVPVP 180

Query: 181 KGTKSRFVVCEIKKNHLKVGLKGQPPVIDGELYQIVKPDDCYWSIEDQSVISILLTKHNQ 240
            GTKSRFVVC+IKKNHLKVGLKGQPP+I+GELY+ +K DDCYWSIEDQ+ IS+LLTKH+Q
Sbjct: 181 PGTKSRFVVCDIKKNHLKVGLKGQPPIIEGELYKPIKVDDCYWSIEDQNTISVLLTKHDQ 240

Query: 241 MEWWKYLIKGEPEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLPTSDEMQKQ 300
           +EWWK L+KG+PEIDTQKVEPENSKL+DLDPETRQTVEKMMFDQRQKSMGLPTSDEMQKQ
Sbjct: 241 LEWWKCLVKGDPEIDTQKVEPENSKLADLDPETRQTVEKMMFDQRQKSMGLPTSDEMQKQ 300

Query: 301 DILKKFMAEHPEMDFSRAKIS 321
           +ILKKFMAEHPEMDFSRAKIS
Sbjct: 301 EILKKFMAEHPEMDFSRAKIS 301

[Close]

BLAST of CmaCh02G011160.1 vs. NCBI nr
Match: gi|1000979055|ref|XP_002513546.2| (PREDICTED: protein BOBBER 1 isoform X1 [Ricinus communis])

HSP 1 Score: 391.7 bits (1005), Expect = 1.2e-105
Identity = 215/326 (65.95%), Postives = 252/326 (77.30%), Query Frame = 1


Query: 1   MAIISEYEEKEEIPKPKKPSSSSSSPPSSSSSKPSQFSANFDPSNPLGFLNEVFDFLAKE 60
           MAIIS+Y+E+E   KP       ++ PSSSSSK   F+A FDP NP+G + +VF+FL  E
Sbjct: 1   MAIISDYQEEEREMKP-------AASPSSSSSKTLPFNATFDPKNPIGIVEKVFEFLLTE 60

Query: 61  SDFLSRDRVEKEIETVVRRAVEK-RKKHVESLELKGKAEKRIKEEV-GSVKQEAAPV--- 120
           SDF++RD  EKEI  VV+ A EK ++K  E+   K  A K++KEEV   VKQE   V   
Sbjct: 61  SDFMARDSAEKEIVAVVKAAKEKSKRKTAEAERDKAAALKKVKEEVKAEVKQEKKEVKQE 120

Query: 121 -TVKQDPRNVASPPEEKVDVKLEESTEEKKEENGPRVPNNGNGLDMENYCWTQSLQEVNI 180
             VKQ+P  +         + +E      KEE GPRVPN GNGLD+E Y WTQ+LQEVNI
Sbjct: 121 REVKQEPTEIEKEETGPRGINIE------KEETGPRVPNKGNGLDLEKYSWTQTLQEVNI 180

Query: 181 NVPVPKGTKSRFVVCEIKKNHLKVGLKGQPPVIDGELYQIVKPDDCYWSIEDQSVISILL 240
            VPVP GTKSRFVVC+IKKNHLKVGLKGQPP+I+GELY+ +K DDCYWSIEDQ+ IS+LL
Sbjct: 181 QVPVPPGTKSRFVVCDIKKNHLKVGLKGQPPIIEGELYKPIKVDDCYWSIEDQNTISVLL 240

Query: 241 TKHNQMEWWKYLIKGEPEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLPTSD 300
           TKH+Q+EWWK L+KG+PEIDTQKVEPENSKL+DLDPETRQTVEKMMFDQRQKSMGLPTSD
Sbjct: 241 TKHDQLEWWKCLVKGDPEIDTQKVEPENSKLADLDPETRQTVEKMMFDQRQKSMGLPTSD 300

Query: 301 EMQKQDILKKFMAEHPEMDFSRAKIS 321
           EMQKQ+ILKKFMAEHPEMDFSRAKIS
Sbjct: 301 EMQKQEILKKFMAEHPEMDFSRAKIS 313

[Close]

BLAST of CmaCh02G011160.1 vs. NCBI nr
Match: gi|1012215612|ref|XP_015934358.1| (PREDICTED: protein BOBBER 1 [Arachis duranensis])

HSP 1 Score: 388.3 bits (996), Expect = 1.3e-104
Identity = 211/329 (64.13%), Postives = 245/329 (74.47%), Query Frame = 1


Query: 1   MAIISEYEEKEEIPKPKKPSSSSSSPPSSSSSKPSQFSANFDPSNPLGFLNEVFDFLAKE 60
           MAIIS++ E +      KPSSSSS PPSSSSS  S FSA+FDPSNP+ FL +VFDF+ +E
Sbjct: 1   MAIISDFNEDDHKETRTKPSSSSSQPPSSSSSSSSSFSASFDPSNPVAFLQKVFDFVNQE 60

Query: 61  SDFLSRDRVEKEIETVVRRAVEKRKKHVESL--------ELKGKAEKRIKEEVGSVKQEA 120
           SDF   D  EKEI ++     +KRKK  E L        E K KAEKR+KEE        
Sbjct: 61  SDFFGTDAAEKEIASLAHATRDKRKKKAEELKAAAAAEAEAKKKAEKRLKEE-------- 120

Query: 121 APVTVKQDPRNVASPPEEKVDVKLEESTEEKKEENGPR-VPNNGNGLDMENYCWTQSLQE 180
                                 + E + + KK+E+  + VPN GNG+D+E Y WTQ+LQE
Sbjct: 121 ---------------------KEHESAQDTKKQESAAKIVPNKGNGMDLEKYSWTQTLQE 180

Query: 181 VNINVPVPKGTKSRFVVCEIKKNHLKVGLKGQPPVIDGELYQIVKPDDCYWSIEDQSVIS 240
           V +NVPVP GTKSRFV+CEIKKNH+KVGLKGQPP+I+GELY+ VKPDDCYWSIEDQS IS
Sbjct: 181 VTVNVPVPSGTKSRFVICEIKKNHIKVGLKGQPPIIEGELYKPVKPDDCYWSIEDQSAIS 240

Query: 241 ILLTKHNQMEWWKYLIKGEPEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLP 300
           ILLTKH+QMEWWK L+KG+PEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLP
Sbjct: 241 ILLTKHDQMEWWKCLVKGDPEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLP 300

Query: 301 TSDEMQKQDILKKFMAEHPEMDFSRAKIS 321
           TSDE+QKQ++LKKFMAEHPEMDFSRAKI+
Sbjct: 301 TSDELQKQELLKKFMAEHPEMDFSRAKIA 300

The following BLAST results are available for this feature:

BLAST of CmaCh02G011160.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
BOB1_ARATH	3.4e-92	59.20	Protein BOBBER 1 OS=Arabidopsis thaliana GN=BOB1 PE=1 SV=1	[more]
BOB2_ARATH	5.8e-84	54.63	Protein BOBBER 2 OS=Arabidopsis thaliana GN=BOB2 PE=2 SV=1	[more]
NUDC_MOUSE	9.6e-55	47.83	Nuclear migration protein nudC OS=Mus musculus GN=Nudc PE=1 SV=1	[more]
NUDC_CHICK	2.8e-54	43.41	Nuclear migration protein nudC OS=Gallus gallus GN=NUDC PE=2 SV=1	[more]
NUDC_RAT	8.2e-54	47.06	Nuclear migration protein nudC OS=Rattus norvegicus GN=Nudc PE=1 SV=1	[more]

BLAST of CmaCh02G011160.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KQ62_CUCSA	3.7e-146	86.60	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G139440 PE=4 SV=1	[more]
A0A151TS61_CAJCA	2.3e-103	63.13	Nuclear migration protein nudC OS=Cajanus cajan GN=KK1_009103 PE=4 SV=1	[more]
A0A061G2U6_THECC	1.9e-102	63.95	HSP20-like chaperones superfamily protein isoform 1 OS=Theobroma cacao GN=TCM_01...	[more]
A0A059DEY7_EUCGR	9.6e-102	63.80	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_A01460 PE=4 SV=1	[more]
V4TLN9_9ROSI	2.1e-101	64.24	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10021271mg PE=4 SV=1	[more]

BLAST of CmaCh02G011160.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G53400.1	1.9e-93	59.20	HSP20-like chaperones superfamily protein	[more]
AT4G27890.1	3.3e-85	54.63	HSP20-like chaperones superfamily protein	[more]
AT5G58740.1	9.7e-13	31.68	HSP20-like chaperones superfamily protein	[more]
AT2G27280.1	3.6e-07	41.18	Coiled-coil domain-containing protein 55 (DUF2040)	[more]

BLAST of CmaCh02G011160.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659074420\|ref\|XP_008437594.1\|	8.2e-147	87.19	PREDICTED: protein BOBBER 1 [Cucumis melo]	[more]
gi\|778698896\|ref\|XP_011654620.1\|	5.3e-146	86.60	PREDICTED: protein BOBBER 1 [Cucumis sativus]	[more]
gi\|1000979057\|ref\|XP_015571366.1\|	7.0e-106	66.67	PREDICTED: protein BOBBER 1 isoform X2 [Ricinus communis]	[more]
gi\|1000979055\|ref\|XP_002513546.2\|	1.2e-105	65.95	PREDICTED: protein BOBBER 1 isoform X1 [Ricinus communis]	[more]
gi\|1012215612\|ref\|XP_015934358.1\|	1.3e-104	64.13	PREDICTED: protein BOBBER 1 [Arachis duranensis]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR007052	CS_dom
IPR008978	HSP20-like_chaperone

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmaCh02G011160	CmaCh02G011160	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmaCh02G011160.1	CmaCh02G011160.1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh02G011160.1.CDS.6	CmaCh02G011160.1.CDS.6	CDS
CmaCh02G011160.1.CDS.5	CmaCh02G011160.1.CDS.5	CDS
CmaCh02G011160.1.CDS.4	CmaCh02G011160.1.CDS.4	CDS
CmaCh02G011160.1.CDS.3	CmaCh02G011160.1.CDS.3	CDS
CmaCh02G011160.1.CDS.2	CmaCh02G011160.1.CDS.2	CDS
CmaCh02G011160.1.CDS.1	CmaCh02G011160.1.CDS.1	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh02G011160.1.five_prime_UTR.1	CmaCh02G011160.1.five_prime_UTR.1	five_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh02G011160.1.exon.6	CmaCh02G011160.1.exon.6	exon
CmaCh02G011160.1.exon.5	CmaCh02G011160.1.exon.5	exon
CmaCh02G011160.1.exon.4	CmaCh02G011160.1.exon.4	exon
CmaCh02G011160.1.exon.3	CmaCh02G011160.1.exon.3	exon
CmaCh02G011160.1.exon.2	CmaCh02G011160.1.exon.2	exon
CmaCh02G011160.1.exon.1	CmaCh02G011160.1.exon.1	exon

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007052	CS domain	PFAM	PF04969	CS	coord: 162..236 score: 4.6
IPR007052	CS domain	PROFILE	PS51203	CS	coord: 158..247 score: 17
IPR008978	HSP20-like chaperone	GENE3D	G3DSA:2.60.40.790		coord: 155..282 score: 2.4
IPR008978	HSP20-like chaperone	unknown	SSF49764	HSP20-like chaperones	coord: 149..262 score: 3.66
None	No IPR available	unknown	Coil	Coil	coord: 66..86 scor
None	No IPR available	PANTHER	PTHR12356	NUCLEAR MOVEMENT PROTEIN NUDC	coord: 42..320 score: 3.3E
None	No IPR available	PANTHER	PTHR12356:SF3	NUCLEAR MIGRATION PROTEIN NUDC	coord: 42..320 score: 3.3E