CmaCh02G011160 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh02G011160
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Nuclear migration nudC
Location	Cma_Chr02 : 6626738 .. 6631126 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TCGGAAATTTCACCCATAAACCCTCAACCTGTTGGACCGATTATCACCCGCGATCTAGCGATTCTGCCAGCTTCTGCCCGCCATGGCGATTATCTCTGAATACGAAGAAAAGGAAGAAATCCCAAAGCCGAAGAAGCCTTCCTCCTCCTCCTCATCTCCACCGTCGTCTTCATCATCTAAGCCCTCTCAGTTCAGTGCAAACTTTGACCCTTCAAACCCTCTAGGGTTTTTAAACGAGGTTTTCGATTTTCTTGCCAAGGAGAGCGATTTTCTCTCCAGGGATAGAGTCGAGAAGGAAATCGAGACGGTAGTGCGTAGAGCTGTGGAGAAGAGAAAGAAGCACGTGGAATCACTTGAGCTTAAAGGAAAGGCCGAGAAGAGGATCAAGGAAGAGGTGGGGAGTGTGAAGCAGGAAGCTGCGCCGGTGACTGTAAAGCAGGATCCGAGGAATGTGGCATCACCGCCAGAAGAGAAGGTGGATGTGAAGTTGGAGGAGAGCACCGAGGAGAAGAAAGAGGAGAATGGTCCAAGAGGTGAGCTTTCTTTTATCCCCATCCCTTTCCTCTACTTGTTCGTTCTTCATTTTGTCAATTTTTTTTTTAACTAACTGTCAATGATGTAGCCAACTGGCAAGGTTTTTAGCAATTAGACTGATAAAGTTGGCATTTTGATGTAGAATTATTGGTAGTAGTTTATGGTTCTTTGTTTGAATAATTAATGGCTTTAGTTTGTAGTTAGCTAGTTTTTACTTGGATATCAGGTTGTAGATTAATCCATTGATCCTCCATAAATTGAAAGTAGAGCTCTCCTGAGTTAGTTTTAGCTTCAGTCCCTTTAGGTACGTGTATTTCTTTGAGCGTGGTGATTGACTTTTAAGTTTCGAATTAAAGTATTTGGAGTTCACAAGTCGTGATTAACTTTTGTTGAAAATTTTGTATGGAAAATATGACTGCTCTCTGGGATGTGGAGCATAAATTTTATCCTCTTGAGTCGAGCATTATATTCTCTTCATGCAGTTTGATAGTTTTTGTCTTCTCTTTTGATAATGAATTTGCAGAAGATATCTAGAATTCCACTGGAATTTGGAACTCAGTATGAGGCTTACCCTATCAAATTTATGAAATATATCGTTGTTTCCTTGTGAGTTCAACTGCCTGACTGACCCTTTAATGATTATGGTTGTTCAAGTAACTTTGCCAAAGTAGTGTTCCCACCCCCCACCCGACGCCTTTATGCACATGGGAATATAGTATGTTTCTATACTAAATGTTGCCTTGAACTTTGTTTCTTACTTGTGGCATTGCAGTTCCCAACAATGGTAATGGCCTTGATATGGAAAACTACTGTTGGACACAGAGTCTCCAAGAGGTCAACATTAATGTACCAGTACCCAAAGGAACTAAGTCCAGGTTTGTGGTGTGTGAGATCAAGAAGAATCATCTCAAAGTTGGACTAAAGGGTCAACCACCAGTGATAGATGTATGTTTGTTTGAAGCTGCTTGTTTCTGTTTCAGATATATTTGCAGTGTGTTAATTTTTTTTTTTTTTCAAGTTCTGAATTATTGTCACATGCTTGCAGGGAGAGCTTTATCAGATTGTTAAGCCAGATGATTGTTATTGGAGCATAGGTATTTCTGGGGTTTTGTTCACATAATAACAGTTCAAATAATCTTAAATTTTGTTATAAATATGGATTATCTTGATGTTGCTCAAGTCCTTGGAAATAGATGATAACATAAATAGGAAGGGATGCATTGAGGTAGTTGAAACCAGTTCCTTGTGTTCACCTGGGTATCAAAGTTACTGTTCTAACTATTTTTTGATGTTCCTTGTTTTATTTTGATACTTGTTGCAGAGGATCAGAGCGTCATCTCTATTCTATTGACCAAGCACAACCAAATGGAGTGGTGGAAGTATTTAATTAAGGGGGAACCTGAGATTGATACTCAGAAGGTTGAACCTGAGAACAGCAAACTGTCTGATTTGGATCCAGAGACACGGCAAACAGTTGAAAAGATGATGGTTTGTATTTTGATCATCTATATTTTATCTATTACACTTATGATTTATTTGTATCAAGGTTTTCCTCGACATATACTCACGTGTTGTTTTTCTATTTCTTCTGCATAAAAATTGCATTTAAATGTGCACAAATATGTAAAAAGAAAAAGCACGTTCTCAAATTTGATGTGGGAGGATAATTCATGAAGCACTTTTTCATACACTTCCATAGGTTATTATAAAAAGCTTATAAAAAGCATAAAAATCTATTCGCTCCCATTAGTAGTTTACAGAAAAATAGAAATCAAACTAAATGTGAACTGCATTGGGAGTATAGTCAGAATTTGTGACTATTTCATAATGACTGTTTCAATGAGACCAAATGAAAGAATGCTTAGGCTTAAAAAAACCAAGCCACCCACAAAAGGGAACCCACTGAAGGAAGGAGCTTCAACTTCAAGGATAAGGAGTCCGACATTAGTATTGTTTATTTTTATTTATTTTTTATTTTTTTATTTTTTGAAACAAGTACTTTTTATTGCATTAGTGAAAAGTCATTAGTATTGTTTATAGACTCCAGCTAGGAGTTCACTAGAACCACCCCAATAAATGTGAATTCCTTCAGAAGTATGGTCACACGATCACAGGAAGAACTTGAAATCCACACCAAAAGGATAAATTGCATTTTGATTAGTCTATCATCTCCTCTACATATCAACACTTCCCTTCAATTTCTCAGATTTCTGACCCCTGGAAAGAAGGAATATCCTTCTTCTAGGATCTAGGTAGATGACTTGACTACTGGTGGAAGTATATTTGTAGAAACTCTACCAAGAGAGCACCACTTTGATACCAATTTGCCCTTAAAACCTGAAAATTTGTTGGCCATATCATTAAACTTCTATCAGTTCTTTCAGTCCATATTGCCTGAACAATTCAAGGATTTACTTGACTGGGAAAACGACTACATGAATATCTTAATCTTTTTAGGAGCCTTGTATTCTTATAGTTTTTTGGTCACAACTCATAACTCTAGGAATAACCTCCGATCGAAGGAAGATGTTGAACTTACAACTAGGTGACAATAGCCAAAAGATTTGTACTTTTAAACCCTCTCCGTTCCTCTTATAGTGGATTATTAACTTCAAAGTTATTTTACTGCTGGTGAGGGAATGAAGTTCAGGAAACTTGGCAAGATGTGTTGTTCAACCTAGTCCGCTGAAATCTAATTCTCCTCCCCATTCTGAAGGAAGGTGAAGTCTCAAGTACGTTCTTACTATGAGTTATGGAACTCAAGCTACTTTGTAATAGAAACCAAATATATTGAAATATATAAGGTAACAATATTACAATAAAACCACCAAGTAAGTTGAGACACTTGAATCTCCTCTCTCTTCAGATACCTCTTAAGCTCAGACTCACTAAACAATTTCTTACCTGCCTCCTTTTCCACCCCCTACTTTTATATCAAATCACCCTAACCATGCCCCTAACTAATTAGTAATATATCCGTAAACTCTAAGAATAGCGCCACTTTCATCCTAATATCATTCCTATGACTTGGCAAACTACTACTTGCATGCCTAGTTTGGCAGTATTTCCAACCATAGTCATCATCTTACCCCCAAAGCTCAACTGTGTGTAGCAATGGCACTAAGAATTAGTTTCTCCTCCAAACCACCACACCTTGTAAGCTGTAGTTGTAGCTTTGATGTTGTTTCTATACCAAGAGACCCCCTTTAAAGTTGAAATGGAGTCAAGGACAAATTTTCAGTTTTCCTGACTCACTCAATTATTGAAACTTCAAATCAGGCCCCTTCCTCGTGGAATTCCTCAAAAATTTCTCAATGGGTACGCCCTCGTTTTTAGATATAATAGGACATTTGTAAAGGGATGCTGATGATGCTAATAAATTCATGTTCATGAGGAAAATTTTATTTTATGATTGATCTATTAATTTCTTCAAATTATATACGTTTCCTGCAGACACCTTTGAATAAATCTAGACCTATGCCTGATTATGCTTTCTGGACTCCTGGCATTCAATGATTTTTTAAGTACATTCTTTGGTGGCATATTCTTATGCATTGTTGGGTACGGTCACATAGTTTATATATATATATAAGAAACCAAATATCAATTCATTTTTCCTGATCGATTTGGAAAAATTTTACAGTTTGATCAAAGGCAGAAGTCTATGGGACTCCCAACCAGTGATGAGATGCAAAAGCAAGATATTCTGAAGAAGTTCATGGCTGAGGTGATTATTTGAGCTGTGTCCCTGTATATGTTTGTGGTTTATAATATCTATTGCTTCTCTCTACTGACTCTGAAATTGATCCTATGCAGCATCCGGAGATGGATTTTTCGAGGGCAAAGATATCATAA

mRNA sequence

TCGGAAATTTCACCCATAAACCCTCAACCTGTTGGACCGATTATCACCCGCGATCTAGCGATTCTGCCAGCTTCTGCCCGCCATGGCGATTATCTCTGAATACGAAGAAAAGGAAGAAATCCCAAAGCCGAAGAAGCCTTCCTCCTCCTCCTCATCTCCACCGTCGTCTTCATCATCTAAGCCCTCTCAGTTCAGTGCAAACTTTGACCCTTCAAACCCTCTAGGGTTTTTAAACGAGGTTTTCGATTTTCTTGCCAAGGAGAGCGATTTTCTCTCCAGGGATAGAGTCGAGAAGGAAATCGAGACGGTAGTGCGTAGAGCTGTGGAGAAGAGAAAGAAGCACGTGGAATCACTTGAGCTTAAAGGAAAGGCCGAGAAGAGGATCAAGGAAGAGGTGGGGAGTGTGAAGCAGGAAGCTGCGCCGGTGACTGTAAAGCAGGATCCGAGGAATGTGGCATCACCGCCAGAAGAGAAGGTGGATGTGAAGTTGGAGGAGAGCACCGAGGAGAAGAAAGAGGAGAATGGTCCAAGAGTTCCCAACAATGGTAATGGCCTTGATATGGAAAACTACTGTTGGACACAGAGTCTCCAAGAGGTCAACATTAATGTACCAGTACCCAAAGGAACTAAGTCCAGGTTTGTGGTGTGTGAGATCAAGAAGAATCATCTCAAAGTTGGACTAAAGGGTCAACCACCAGTGATAGATGGAGAGCTTTATCAGATTGTTAAGCCAGATGATTGTTATTGGAGCATAGAGGATCAGAGCGTCATCTCTATTCTATTGACCAAGCACAACCAAATGGAGTGGTGGAAGTATTTAATTAAGGGGGAACCTGAGATTGATACTCAGAAGGTTGAACCTGAGAACAGCAAACTGTCTGATTTGGATCCAGAGACACGGCAAACAGTTGAAAAGATGATGTTTGATCAAAGGCAGAAGTCTATGGGACTCCCAACCAGTGATGAGATGCAAAAGCAAGATATTCTGAAGAAGTTCATGGCTGAGCATCCGGAGATGGATTTTTCGAGGGCAAAGATATCATAA

Coding sequence (CDS)

ATGGCGATTATCTCTGAATACGAAGAAAAGGAAGAAATCCCAAAGCCGAAGAAGCCTTCCTCCTCCTCCTCATCTCCACCGTCGTCTTCATCATCTAAGCCCTCTCAGTTCAGTGCAAACTTTGACCCTTCAAACCCTCTAGGGTTTTTAAACGAGGTTTTCGATTTTCTTGCCAAGGAGAGCGATTTTCTCTCCAGGGATAGAGTCGAGAAGGAAATCGAGACGGTAGTGCGTAGAGCTGTGGAGAAGAGAAAGAAGCACGTGGAATCACTTGAGCTTAAAGGAAAGGCCGAGAAGAGGATCAAGGAAGAGGTGGGGAGTGTGAAGCAGGAAGCTGCGCCGGTGACTGTAAAGCAGGATCCGAGGAATGTGGCATCACCGCCAGAAGAGAAGGTGGATGTGAAGTTGGAGGAGAGCACCGAGGAGAAGAAAGAGGAGAATGGTCCAAGAGTTCCCAACAATGGTAATGGCCTTGATATGGAAAACTACTGTTGGACACAGAGTCTCCAAGAGGTCAACATTAATGTACCAGTACCCAAAGGAACTAAGTCCAGGTTTGTGGTGTGTGAGATCAAGAAGAATCATCTCAAAGTTGGACTAAAGGGTCAACCACCAGTGATAGATGGAGAGCTTTATCAGATTGTTAAGCCAGATGATTGTTATTGGAGCATAGAGGATCAGAGCGTCATCTCTATTCTATTGACCAAGCACAACCAAATGGAGTGGTGGAAGTATTTAATTAAGGGGGAACCTGAGATTGATACTCAGAAGGTTGAACCTGAGAACAGCAAACTGTCTGATTTGGATCCAGAGACACGGCAAACAGTTGAAAAGATGATGTTTGATCAAAGGCAGAAGTCTATGGGACTCCCAACCAGTGATGAGATGCAAAAGCAAGATATTCTGAAGAAGTTCATGGCTGAGCATCCGGAGATGGATTTTTCGAGGGCAAAGATATCATAA

Protein sequence

MAIISEYEEKEEIPKPKKPSSSSSSPPSSSSSKPSQFSANFDPSNPLGFLNEVFDFLAKESDFLSRDRVEKEIETVVRRAVEKRKKHVESLELKGKAEKRIKEEVGSVKQEAAPVTVKQDPRNVASPPEEKVDVKLEESTEEKKEENGPRVPNNGNGLDMENYCWTQSLQEVNINVPVPKGTKSRFVVCEIKKNHLKVGLKGQPPVIDGELYQIVKPDDCYWSIEDQSVISILLTKHNQMEWWKYLIKGEPEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLPTSDEMQKQDILKKFMAEHPEMDFSRAKIS

Homology

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BLAST of CmaCh02G011160 vs. Swiss-Prot
Match: BOB1_ARATH (Protein BOBBER 1 OS=Arabidopsis thaliana GN=BOB1 PE=1 SV=1)

HSP 1 Score: 339.7 bits (870), Expect = 3.4e-92
Identity = 193/326 (59.20%), Postives = 229/326 (70.25%), Query Frame = 1


Query: 1   MAIISEYEEKEEIPKPKKPSSSSSSPPSSSSSKPS--QFSANFDPSNPLGFLNEVFDFLA 60
           MAIISE EE+                  SSSS+P    F A    +NPLGFL +VFDFL 
Sbjct: 1   MAIISEVEEE------------------SSSSRPMIFPFRATLSSANPLGFLEKVFDFLG 60

Query: 61  KESDFLSRDRVEKEIETVVRRAVEK----RKKHVESLELKGKAEKRIKEEVGSVKQEAAP 120
           ++SDFL +   E EI   VR A EK     KK  E   +K   +K  KE V  V+++   
Sbjct: 61  EQSDFLKKPSAEDEIVVAVRAAKEKLKKAEKKKAEKESVKPVEKKAEKEIVKLVEKKVEK 120

Query: 121 VTVKQDPRNVASPPEEKVDVKLEESTEEKKEENGPRVPNNGNGLDMENYCWTQSLQEVNI 180
            +VK     +A+   E ++V+  +  EEKKE +GP VPN GNG D+ENY W Q+LQEV +
Sbjct: 121 ESVKP---TIAASSAEPIEVEKPKEEEEKKE-SGPIVPNKGNGTDLENYSWIQNLQEVTV 180

Query: 181 NVPVPKGTKSRFVVCEIKKNHLKVGLKGQPPVIDGELYQIVKPDDCYWSIEDQSVISILL 240
           N+PVP GTK+R VVCEIKKN LKVGLKGQ P++DGELY+ VKPDDCYW+IEDQ VISILL
Sbjct: 181 NIPVPTGTKARTVVCEIKKNRLKVGLKGQDPIVDGELYRSVKPDDCYWNIEDQKVISILL 240

Query: 241 TKHNQMEWWKYLIKGEPEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLPTSD 300
           TK +QMEWWK  +KGEPEIDTQKVEPE SKL DLDPETR TVEKMMFDQRQK MGLPTS+
Sbjct: 241 TKSDQMEWWKCCVKGEPEIDTQKVEPETSKLGDLDPETRSTVEKMMFDQRQKQMGLPTSE 300

Query: 301 EMQKQDILKKFMAEHPEMDFSRAKIS 321
           E+QKQ+ILKKFM+EHPEMDFS AK +
Sbjct: 301 ELQKQEILKKFMSEHPEMDFSNAKFN 304

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BLAST of CmaCh02G011160 vs. Swiss-Prot
Match: BOB2_ARATH (Protein BOBBER 2 OS=Arabidopsis thaliana GN=BOB2 PE=2 SV=1)

HSP 1 Score: 312.4 bits (799), Expect = 5.8e-84
Identity = 177/324 (54.63%), Postives = 219/324 (67.59%), Query Frame = 1


Query: 1   MAIISEYEEKEEIPKPKKPSSSSSSPPSSSSSKPSQFSANFDPSNPLGFLNEVFDFLAKE 60
           MAIISE EE      P                    F+A+FDPSNP+ FL +V D + KE
Sbjct: 1   MAIISEMEEARPSMVP--------------------FTASFDPSNPIAFLEKVLDVIGKE 60

Query: 61  SDFLSRDRVEKEIETVVRRAVEKRKKHVESLELKGKAEKRIKEEVGSVKQEAAPVTVKQD 120
           S+FL +D  EKEI   V  A ++R +  E  +L+       KE V S++ E  P      
Sbjct: 61  SNFLKKDTAEKEIVAAVM-AAKQRLREAEKKKLE-------KESVKSMEVEK-PKKDSLK 120

Query: 121 PRNVASPPEEKV----DVKLEESTEEKKEENGPRVPNNGNGLDMENYCWTQSLQEVNINV 180
           P  +  P EE +     +++E+  EEK  E+GP VPN GNGLD E Y W Q+LQEV IN+
Sbjct: 121 PTELEKPKEESLMATDPMEIEKPKEEK--ESGPIVPNKGNGLDFEKYSWGQNLQEVTINI 180

Query: 181 PVPKGTKSRFVVCEIKKNHLKVGLKGQPPVIDGELYQIVKPDDCYWSIEDQSVISILLTK 240
           P+P+GTKSR V CEIKKN LKVGLKGQ  ++DGE +  VKPDDC+W+IEDQ +IS+LLTK
Sbjct: 181 PMPEGTKSRSVTCEIKKNRLKVGLKGQDLIVDGEFFNSVKPDDCFWNIEDQKMISVLLTK 240

Query: 241 HNQMEWWKYLIKGEPEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLPTSDEM 300
            +QMEWWKY +KGEPEIDTQKVEPE SKL DLDPETR +VEKMMFDQRQK MGLP SDE+
Sbjct: 241 QDQMEWWKYCVKGEPEIDTQKVEPETSKLGDLDPETRASVEKMMFDQRQKQMGLPRSDEI 293

Query: 301 QKQDILKKFMAEHPEMDFSRAKIS 321
           +K+D+LKKFMA++P MDFS AK +
Sbjct: 301 EKKDMLKKFMAQNPGMDFSNAKFN 293

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BLAST of CmaCh02G011160 vs. Swiss-Prot
Match: NUDC_MOUSE (Nuclear migration protein nudC OS=Mus musculus GN=Nudc PE=1 SV=1)

HSP 1 Score: 215.3 bits (547), Expect = 9.6e-55
Identity = 121/253 (47.83%), Postives = 164/253 (64.82%), Query Frame = 1


Query: 70  EKEIETVVRRAVEKRKKHVESLELKGKAEKRIKEEVGSVKQEAAPVTVKQDPRNVASPPE 129
           E + ET   +  E   +  E L+L+   +K  +++   +K  +     KQD         
Sbjct: 94  EAKAETPGPQIKELTDEEAERLQLEIDQKKDAEDQEAQLKNGSLDSPGKQDAE------- 153

Query: 130 EKVDVKLEESTEEKKEENGPRVPNNGNGLDMENYCWTQSLQEVNINVP--VPKGTKSRFV 189
                  +E  EE +++ G   PN GNG D+ NY WTQ+L E+++ VP  V    K + V
Sbjct: 154 -------DEEDEEDEKDKGKLKPNLGNGADLPNYRWTQTLAELDLAVPFRVSFRLKGKDV 213

Query: 190 VCEIKKNHLKVGLKGQPPVIDGELYQIVKPDDCYWSIEDQSVISILLTKHNQMEWWKYLI 249
           V +I++ HL+VGLKGQPPV+DGELY  VK ++  W IED  V+++ L K N+MEWW  L+
Sbjct: 214 VVDIQRRHLRVGLKGQPPVVDGELYNEVKVEESSWLIEDGKVVTVHLEKINKMEWWNRLV 273

Query: 250 KGEPEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLPTSDEMQKQDILKKFMA 309
             +PEI+T+K+ PENSKLSDLD ETR  VEKMM+DQRQKSMGLPTSDE +KQ+ILKKFM 
Sbjct: 274 TSDPEINTKKINPENSKLSDLDSETRSMVEKMMYDQRQKSMGLPTSDEQKKQEILKKFMD 332

Query: 310 EHPEMDFSRAKIS 321
           +HPEMDFS+AK +
Sbjct: 334 QHPEMDFSKAKFN 332

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BLAST of CmaCh02G011160 vs. Swiss-Prot
Match: NUDC_CHICK (Nuclear migration protein nudC OS=Gallus gallus GN=NUDC PE=2 SV=1)

HSP 1 Score: 213.8 bits (543), Expect = 2.8e-54
Identity = 135/311 (43.41%), Postives = 187/311 (60.13%), Query Frame = 1


Query: 50  LNEVFDFLAKESDFLS--RDRVEKEI-----------------ETVVRRAVEKRKKHVES 109
           +N  F FL +++DF +   D V +++                 E   R+  E+R+K   +
Sbjct: 34  VNTFFSFLRRKTDFFTGGEDGVAEKLITDSFNHHNKLAQKERKEKKARQEAERREKAERA 93

Query: 110 LELKGKA-----EKRIKEEVGSVKQEAAPVTVKQDPRNVASPPEEKVDVKL--------- 169
            +L  +A     E RIKE      +EA  + ++ D +  A      V VK          
Sbjct: 94  AKLAKEAKQEANEPRIKE---LTDEEAERLQLEIDQKKEAQKEVNNVPVKSSEDDGDSSD 153

Query: 170 ---EESTEEKKEEN--GPRVPNNGNGLDMENYCWTQSLQEVNINVP--VPKGTKSRFVVC 229
              +E+ +E+K+EN  G   PN GNG D+ NY WTQ+L E+++ +P  V    K + VV 
Sbjct: 154 SNKQETDDEEKDENDKGKLKPNAGNGADLPNYRWTQTLSELDLAIPFKVTFRLKGKDVVV 213

Query: 230 EIKKNHLKVGLKGQPPVIDGELYQIVKPDDCYWSIEDQSVISILLTKHNQMEWWKYLIKG 289
           +I++  L+VGLKG PPVIDGEL+  VK ++  W IED   +++ L K N+MEWW  L+  
Sbjct: 214 DIQRRRLRVGLKGHPPVIDGELFNEVKVEESSWLIEDGKTVTVHLEKINKMEWWNKLVST 273

Query: 290 EPEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLPTSDEMQKQDILKKFMAEH 321
           +PEI+T+K+ PENSKLSDLD ETR  VEKMM+DQRQKSMGLPTSDE +KQDILKKFM +H
Sbjct: 274 DPEINTKKINPENSKLSDLDSETRSMVEKMMYDQRQKSMGLPTSDEQKKQDILKKFMEQH 333

[Close]

BLAST of CmaCh02G011160 vs. Swiss-Prot
Match: NUDC_RAT (Nuclear migration protein nudC OS=Rattus norvegicus GN=Nudc PE=1 SV=1)

HSP 1 Score: 212.2 bits (539), Expect = 8.2e-54
Identity = 128/272 (47.06%), Postives = 175/272 (64.34%), Query Frame = 1


Query: 57  LAKESDFLSRDRVEKEIETVVRRAVEKRKKHVESL------ELKGKAEKRIKEEVGSVKQ 116
           LA+++    R R E E      RA    K+           EL  +  +R++ E+   K+
Sbjct: 65  LAQKARREKRARQETERREKAERAARLAKEAKAETPGPQIKELTDEEAERLQLEIDQ-KK 124

Query: 117 EAAPVTVKQDPRNVASPPEEKVDVKLEESTEEKKEENGPRVPNNGNGLDMENYCWTQSLQ 176
           +A    V+    ++ SP ++  +   EE  EE +++ G   PN GNG D+ NY WTQ+L 
Sbjct: 125 DAENHEVQLKNGSLDSPGKQDAE---EEEDEEDEKDKGKLKPNLGNGADLPNYRWTQTLS 184

Query: 177 EVNINVP--VPKGTKSRFVVCEIKKNHLKVGLKGQPPVIDGELYQIVKPDDCYWSIEDQS 236
           E+++ VP  V    K + VV +I++ HL+VGLKGQ PVIDGELY  VK ++  W IED  
Sbjct: 185 ELDLAVPFRVSFRLKGKDVVVDIQRRHLRVGLKGQAPVIDGELYNEVKVEESSWLIEDGK 244

Query: 237 VISILLTKHNQMEWWKYLIKGEPEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSM 296
           V+++ L K N+MEWW  L+  +PEI+T+K+ PENSKLSDLD ETR  VEKMM+DQRQKSM
Sbjct: 245 VVTVHLEKINKMEWWNRLVTSDPEINTKKINPENSKLSDLDSETRSMVEKMMYDQRQKSM 304

Query: 297 GLPTSDEMQKQDILKKFMAEHPEMDFSRAKIS 321
           GLPTSDE +KQ+ILKKFM +HPEMDFS+AK +
Sbjct: 305 GLPTSDEQKKQEILKKFMDQHPEMDFSKAKFN 332

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BLAST of CmaCh02G011160 vs. TrEMBL
Match: A0A0A0KQ62_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G139440 PE=4 SV=1)

HSP 1 Score: 525.8 bits (1353), Expect = 3.7e-146
Identity = 278/321 (86.60%), Postives = 297/321 (92.52%), Query Frame = 1


Query: 1   MAIISEYEEKEEIPKPKKPSSSSSSPPSSSSS-KPSQFSANFDPSNPLGFLNEVFDFLAK 60
           MAIIS+YEEKEEIPKPKKPSSSSSS PSSSSS KPSQF+A+FDPSNPLGFL +VFDFLA 
Sbjct: 1   MAIISDYEEKEEIPKPKKPSSSSSSSPSSSSSPKPSQFNASFDPSNPLGFLEKVFDFLAN 60

Query: 61  ESDFLSRDRVEKEIETVVRRAVEKRKKHVESLELKGKAEKRIKEEVGSVKQEAAPVTVKQ 120
           E+DFLS+DRVEK+IETVVRRAVEKRKKH ESLELKGKAEKRIKEEV SVK+EAAPV    
Sbjct: 61  ETDFLSKDRVEKDIETVVRRAVEKRKKHDESLELKGKAEKRIKEEVKSVKEEAAPV---- 120

Query: 121 DPRNVASPPEEKVDVKLEESTEEKKEENGPRVPNNGNGLDMENYCWTQSLQEVNINVPVP 180
             +  ASPPEEKV  KLEE+TEEKKEENG RVPN GNGLDM+NY WTQSLQEVN+NVPVP
Sbjct: 121 --KAAASPPEEKVGEKLEENTEEKKEENGARVPNKGNGLDMDNYSWTQSLQEVNVNVPVP 180

Query: 181 KGTKSRFVVCEIKKNHLKVGLKGQPPVIDGELYQIVKPDDCYWSIEDQSVISILLTKHNQ 240
           KGTKSRFVVCEIKKN LKVGLKGQPPVID EL   VKPDDCYWSIED+S++SILLTKHNQ
Sbjct: 181 KGTKSRFVVCEIKKNRLKVGLKGQPPVIDAELCHTVKPDDCYWSIEDESIVSILLTKHNQ 240

Query: 241 MEWWKYLIKGEPEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLPTSDEMQKQ 300
           MEWWKYL+KG+PEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLPTSDEMQKQ
Sbjct: 241 MEWWKYLVKGDPEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLPTSDEMQKQ 300

Query: 301 DILKKFMAEHPEMDFSRAKIS 321
           +ILKKFM+EHPEMDFSRAKIS
Sbjct: 301 EILKKFMSEHPEMDFSRAKIS 315

[Close]

BLAST of CmaCh02G011160 vs. TrEMBL
Match: A0A151TS61_CAJCA (Nuclear migration protein nudC OS=Cajanus cajan GN=KK1_009103 PE=4 SV=1)

HSP 1 Score: 383.6 bits (984), Expect = 2.3e-103
Identity = 202/320 (63.12%), Postives = 249/320 (77.81%), Query Frame = 1


Query: 1   MAIISEYEEKEEIPKPKKPSSSSSSPPSSSSSKPSQFSANFDPSNPLGFLNEVFDFLAKE 60
           MAIISE+ E++  P P +P  S S         PS F+A FD SNPL FLN VF+F+A+E
Sbjct: 1   MAIISEFNEEDPKPSPSQPQPSPS---------PSSFTAPFDRSNPLAFLNRVFEFVAQE 60

Query: 61  SDFLSRDRVEKEIETVVRRAVEKRKKHVESLELKGKAEKRIKEEVGSVKQEAAPVTVKQD 120
           +DFL  D  E++I ++VR A +K++  + + E + KAEK+ +EE+ +           Q+
Sbjct: 61  TDFLVSDAAERQIVSLVRAAGKKKRDELRATEEREKAEKKKREELKAT----------QE 120

Query: 121 PRNVASPPEEKVDVKLEESTEEKKEENGPRVPNNGNGLDMENYCWTQSLQEVNINVPVPK 180
              V    +E+ ++K E +    K+E   +VPN GNG+D+E Y WTQ+LQEVN+NVPVPK
Sbjct: 121 RERVEKRLKEEKNLKAENTD---KDETASKVPNKGNGMDLEGYSWTQTLQEVNVNVPVPK 180

Query: 181 GTKSRFVVCEIKKNHLKVGLKGQPPVIDGELYQIVKPDDCYWSIEDQSVISILLTKHNQM 240
           GTKSRFV+CEIKKNHLKVGLKGQPP+I+GELY+ VKPDDCYWSIEDQS +SILLTKH+QM
Sbjct: 181 GTKSRFVICEIKKNHLKVGLKGQPPIIEGELYRSVKPDDCYWSIEDQSALSILLTKHDQM 240

Query: 241 EWWKYLIKGEPEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLPTSDEMQKQD 300
           EWWK L+KG+PEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLPTSDE+QKQ+
Sbjct: 241 EWWKCLVKGDPEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLPTSDELQKQE 298

Query: 301 ILKKFMAEHPEMDFSRAKIS 321
           ILKKFM+EHPEMDFSRAK+S
Sbjct: 301 ILKKFMSEHPEMDFSRAKLS 298

[Close]

BLAST of CmaCh02G011160 vs. TrEMBL
Match: A0A061G2U6_THECC (HSP20-like chaperones superfamily protein isoform 1 OS=Theobroma cacao GN=TCM_015401 PE=4 SV=1)

HSP 1 Score: 380.6 bits (976), Expect = 1.9e-102
Identity = 204/319 (63.95%), Postives = 246/319 (77.12%), Query Frame = 1


Query: 1   MAIISEYEEKEEIPKPKKPSSSSSSPPSSSSSKPSQFSANFDPSNPLGFLNEVFDFLAKE 60
           MAIIS+Y+E+E      KPS+SSS P      KP  F+A+ DPSNP+GFL +VFDFL KE
Sbjct: 1   MAIISDYQEEEA-----KPSTSSSQP-----RKPVSFNASLDPSNPVGFLEKVFDFLGKE 60

Query: 61  SDFLSRDRVEKEIETVVRRAVEKRKKHVESLELKGKAEKRIKEEVGSVKQEAAPVTVKQD 120
           +D L ++ V+KEI  +VR A EK +K VE +  K + +K+  +E   +K+E         
Sbjct: 61  TDLLRKENVDKEIAAMVRVAKEKSEKKVEEVAPKVELKKKEVKEENEIKKEVN------- 120

Query: 121 PRNVASPPEEKVDVKLEESTEEKKEENGPRVPNNGNGLDMENYCWTQSLQEVNINVPVPK 180
                   +E +D+  ++  +E++  +G RVPN GNGLD+E Y WTQ+LQEV +NVPVP 
Sbjct: 121 --------KEAMDLDKKDDKKEEETSSGLRVPNKGNGLDLEKYSWTQTLQEVTVNVPVPS 180

Query: 181 GTKSRFVVCEIKKNHLKVGLKGQPPVIDGELYQIVKPDDCYWSIEDQSVISILLTKHNQM 240
           GT+SRFVVCEIKKNHLKVGLKGQPPVIDGEL Q VKPDDCYWSIED   +SILLTKHNQM
Sbjct: 181 GTRSRFVVCEIKKNHLKVGLKGQPPVIDGELLQSVKPDDCYWSIEDNCSLSILLTKHNQM 240

Query: 241 EWWKYLIKGEPEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLPTSDEMQKQD 300
           EWWK L+KG+PEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQK+MGLPTSDE+QKQ+
Sbjct: 241 EWWKSLVKGDPEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKAMGLPTSDELQKQE 294

Query: 301 ILKKFMAEHPEMDFSRAKI 320
           ILKKFM+EHPEMDFSRAK+
Sbjct: 301 ILKKFMSEHPEMDFSRAKL 294

[Close]

BLAST of CmaCh02G011160 vs. TrEMBL
Match: A0A059DEY7_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_A01460 PE=4 SV=1)

HSP 1 Score: 378.3 bits (970), Expect = 9.6e-102
Identity = 208/326 (63.80%), Postives = 261/326 (80.06%), Query Frame = 1


Query: 1   MAIISEYEEKEEIPKP--KKPSSSS--SSPPSSSSSKPSQFSANFDPSNPLGFLNEVFDF 60
           MAIIS+Y+E+EE  +P  KKP+++S  SS  S+S+S  ++FSA FDPS+PLGFL +VF+F
Sbjct: 89  MAIISDYQEEEEQRQPGAKKPAAASAASSSSSASASAAAEFSARFDPSSPLGFLEKVFEF 148

Query: 61  LAKESDFLSRDRVEKEIETVVRRAVEKRKKHVESLELKGKAEK-RIKEEVGSVKQEAAPV 120
           +A+ SDFL+ +  E ++  VVR + EK+K+  +   ++ + E+ R + EV +    AA  
Sbjct: 149 VAERSDFLAHEAAEGDVAAVVRASREKQKQKQKQKAMQVEKERERARAEVEAAAAAAAAA 208

Query: 121 TVKQDPRNVASPPEEKVD-VKLEESTEEKKEENGPRVPNNGNGLDMENYCWTQSLQEVNI 180
             K+         E KV+ V+++++ EEKK  +G  VPN GNGLD+E Y WTQ+LQEV +
Sbjct: 209 AKKKKVDE-----ERKVEEVEMKDAEEEKK--SGAIVPNKGNGLDLEKYSWTQTLQEVTV 268

Query: 181 NVPVPKGTKSRFVVCEIKKNHLKVGLKGQPPVIDGELYQIVKPDDCYWSIEDQSVISILL 240
            VPVPKGTK RFVVC+IKKNH+KVGLKGQPPVI+GEL+Q VKPDDCYWS+EDQS +SILL
Sbjct: 269 RVPVPKGTKGRFVVCDIKKNHMKVGLKGQPPVIEGELFQTVKPDDCYWSLEDQSEVSILL 328

Query: 241 TKHNQMEWWKYLIKGEPEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLPTSD 300
           TKHNQMEWWK L+KG+PEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQK+MGLPTSD
Sbjct: 329 TKHNQMEWWKSLVKGDPEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKAMGLPTSD 388

Query: 301 EMQKQDILKKFMAEHPEMDFSRAKIS 321
           EMQKQ++LKKFMAEHPEMDFSRAKI+
Sbjct: 389 EMQKQEVLKKFMAEHPEMDFSRAKIA 407

[Close]

BLAST of CmaCh02G011160 vs. TrEMBL
Match: V4TLN9_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10021271mg PE=4 SV=1)

HSP 1 Score: 377.1 bits (967), Expect = 2.1e-101
Identity = 212/330 (64.24%), Postives = 242/330 (73.33%), Query Frame = 1


Query: 1   MAIISEYEEKEEIPKPKKPSSSSSSPPSSSSSKPSQFSANFDPSNPLGFLNEVFDFLAKE 60
           MAIIS+++E E  P PKK  S+S+S  S SS+K S FSA  DPSNPLGFL + F+F+AKE
Sbjct: 1   MAIISDFQEDENKPDPKKNPSASASSSSPSSAKTSSFSATLDPSNPLGFLEKAFEFVAKE 60

Query: 61  SDFLSRDRVEKEIETVVRRAVEK----------RKKHVESLELKGKAEKRIKEEVGSVKQ 120
           SDFL++D  EK+I   +R A EK          +  H E ++ K   E++ +EE    K 
Sbjct: 61  SDFLTKDAAEKQIVAAMRAAKEKSSNTKKQPQPQSPHQEEVKAKKMKEEKKEEE----KF 120

Query: 121 EAAPVTVKQDPRNVASPPEEKVDVKLEESTEEKKEENGPRVPNNGNGLDMENYCWTQSLQ 180
           E  P    Q     A PPE ++D             N  R PN GNGLD+ENY WTQ LQ
Sbjct: 121 EDLPTMKVQK----APPPEPQLDAN----------GNPARAPNKGNGLDLENYSWTQILQ 180

Query: 181 EVNINVPVPKGTKSRFVVCEIKKNHLKVGLKGQPPVIDGELYQIVKPDDCYWSIEDQSVI 240
           EV ++VPVP GTKSRFV+CEIKKNHLKVGLKGQPP+IDGEL+  VKPDDCYWSIEDQ  +
Sbjct: 181 EVTVSVPVPAGTKSRFVLCEIKKNHLKVGLKGQPPIIDGELHMAVKPDDCYWSIEDQKTV 240

Query: 241 SILLTKHNQMEWWKYLIKGEPEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGL 300
           SILLTK NQMEWWK LIKG PEIDTQKVEPENSKLSDLDPETR TVEKMMFDQRQKSMGL
Sbjct: 241 SILLTKQNQMEWWKCLIKGGPEIDTQKVEPENSKLSDLDPETRSTVEKMMFDQRQKSMGL 300

Query: 301 PTSDEMQKQDILKKFMAEHPEMDFSRAKIS 321
           P+SDEMQKQ+ILKKFMAEHPEMDFSRAKIS
Sbjct: 301 PSSDEMQKQEILKKFMAEHPEMDFSRAKIS 312

[Close]

BLAST of CmaCh02G011160 vs. TAIR10
Match: AT5G53400.1 (AT5G53400.1 HSP20-like chaperones superfamily protein)

HSP 1 Score: 339.7 bits (870), Expect = 1.9e-93
Identity = 193/326 (59.20%), Postives = 229/326 (70.25%), Query Frame = 1


Query: 1   MAIISEYEEKEEIPKPKKPSSSSSSPPSSSSSKPS--QFSANFDPSNPLGFLNEVFDFLA 60
           MAIISE EE+                  SSSS+P    F A    +NPLGFL +VFDFL 
Sbjct: 1   MAIISEVEEE------------------SSSSRPMIFPFRATLSSANPLGFLEKVFDFLG 60

Query: 61  KESDFLSRDRVEKEIETVVRRAVEK----RKKHVESLELKGKAEKRIKEEVGSVKQEAAP 120
           ++SDFL +   E EI   VR A EK     KK  E   +K   +K  KE V  V+++   
Sbjct: 61  EQSDFLKKPSAEDEIVVAVRAAKEKLKKAEKKKAEKESVKPVEKKAEKEIVKLVEKKVEK 120

Query: 121 VTVKQDPRNVASPPEEKVDVKLEESTEEKKEENGPRVPNNGNGLDMENYCWTQSLQEVNI 180
            +VK     +A+   E ++V+  +  EEKKE +GP VPN GNG D+ENY W Q+LQEV +
Sbjct: 121 ESVKP---TIAASSAEPIEVEKPKEEEEKKE-SGPIVPNKGNGTDLENYSWIQNLQEVTV 180

Query: 181 NVPVPKGTKSRFVVCEIKKNHLKVGLKGQPPVIDGELYQIVKPDDCYWSIEDQSVISILL 240
           N+PVP GTK+R VVCEIKKN LKVGLKGQ P++DGELY+ VKPDDCYW+IEDQ VISILL
Sbjct: 181 NIPVPTGTKARTVVCEIKKNRLKVGLKGQDPIVDGELYRSVKPDDCYWNIEDQKVISILL 240

Query: 241 TKHNQMEWWKYLIKGEPEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLPTSD 300
           TK +QMEWWK  +KGEPEIDTQKVEPE SKL DLDPETR TVEKMMFDQRQK MGLPTS+
Sbjct: 241 TKSDQMEWWKCCVKGEPEIDTQKVEPETSKLGDLDPETRSTVEKMMFDQRQKQMGLPTSE 300

Query: 301 EMQKQDILKKFMAEHPEMDFSRAKIS 321
           E+QKQ+ILKKFM+EHPEMDFS AK +
Sbjct: 301 ELQKQEILKKFMSEHPEMDFSNAKFN 304

[Close]

BLAST of CmaCh02G011160 vs. TAIR10
Match: AT4G27890.1 (AT4G27890.1 HSP20-like chaperones superfamily protein)

HSP 1 Score: 312.4 bits (799), Expect = 3.3e-85
Identity = 177/324 (54.63%), Postives = 219/324 (67.59%), Query Frame = 1


Query: 1   MAIISEYEEKEEIPKPKKPSSSSSSPPSSSSSKPSQFSANFDPSNPLGFLNEVFDFLAKE 60
           MAIISE EE      P                    F+A+FDPSNP+ FL +V D + KE
Sbjct: 1   MAIISEMEEARPSMVP--------------------FTASFDPSNPIAFLEKVLDVIGKE 60

Query: 61  SDFLSRDRVEKEIETVVRRAVEKRKKHVESLELKGKAEKRIKEEVGSVKQEAAPVTVKQD 120
           S+FL +D  EKEI   V  A ++R +  E  +L+       KE V S++ E  P      
Sbjct: 61  SNFLKKDTAEKEIVAAVM-AAKQRLREAEKKKLE-------KESVKSMEVEK-PKKDSLK 120

Query: 121 PRNVASPPEEKV----DVKLEESTEEKKEENGPRVPNNGNGLDMENYCWTQSLQEVNINV 180
           P  +  P EE +     +++E+  EEK  E+GP VPN GNGLD E Y W Q+LQEV IN+
Sbjct: 121 PTELEKPKEESLMATDPMEIEKPKEEK--ESGPIVPNKGNGLDFEKYSWGQNLQEVTINI 180

Query: 181 PVPKGTKSRFVVCEIKKNHLKVGLKGQPPVIDGELYQIVKPDDCYWSIEDQSVISILLTK 240
           P+P+GTKSR V CEIKKN LKVGLKGQ  ++DGE +  VKPDDC+W+IEDQ +IS+LLTK
Sbjct: 181 PMPEGTKSRSVTCEIKKNRLKVGLKGQDLIVDGEFFNSVKPDDCFWNIEDQKMISVLLTK 240

Query: 241 HNQMEWWKYLIKGEPEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLPTSDEM 300
            +QMEWWKY +KGEPEIDTQKVEPE SKL DLDPETR +VEKMMFDQRQK MGLP SDE+
Sbjct: 241 QDQMEWWKYCVKGEPEIDTQKVEPETSKLGDLDPETRASVEKMMFDQRQKQMGLPRSDEI 293

Query: 301 QKQDILKKFMAEHPEMDFSRAKIS 321
           +K+D+LKKFMA++P MDFS AK +
Sbjct: 301 EKKDMLKKFMAQNPGMDFSNAKFN 293

[Close]

BLAST of CmaCh02G011160 vs. TAIR10
Match: AT5G58740.1 (AT5G58740.1 HSP20-like chaperones superfamily protein)

HSP 1 Score: 71.6 bits (174), Expect = 9.7e-13
Identity = 32/101 (31.68%), Postives = 58/101 (57.43%), Query Frame = 1


Query: 165 WTQSLQEVNINVPVPKGTKSRFVVCEIKKNHLKVGLKGQPPVIDGELYQIVKPDDCYWSI 224
           W Q+L+EVN+ + +P     +   C+I+  H++VG+KG PP ++ +L   VK D  +W++
Sbjct: 23  WDQTLEEVNMYITLPPNVHPKSFHCKIQSKHIEVGIKGNPPYLNHDLSAPVKTDCSFWTL 82

Query: 225 EDQSVISILLTKHNQMEWWKYLIKGEPEIDTQKVEPENSKL 266
           ED  ++ I L K  + + W   I G+ ++D    + E  +L
Sbjct: 83  ED-DIMHITLQKREKGQTWASPILGQGQLDPYATDLEQKRL 122

[Close]

BLAST of CmaCh02G011160 vs. TAIR10
Match: AT2G27280.1 (AT2G27280.1 Coiled-coil domain-containing protein 55 (DUF2040))

HSP 1 Score: 53.1 bits (126), Expect = 3.6e-07
Identity = 35/85 (41.18%), Postives = 45/85 (52.94%), Query Frame = 1


Query: 37  FSANFDPSNPLGFLNEVFDFLAKESDFLSRDRVEKEIETVVRRAVEKRKKHVESLELKGK 96
           FSA+F+PSNPLGFL  V DF+ KES+FL +D  EKEI   V  A E+         L+  
Sbjct: 11  FSASFNPSNPLGFLENVLDFIGKESNFLRKDTAEKEITDAVTTAKER---------LRET 70

Query: 97  AEKRIKEEVGSVKQEAAPVTVKQDP 122
            +K    +V  V+    P     DP
Sbjct: 71  EKKTESMDVEKVRPSTLPFNASFDP 86

[Close]

BLAST of CmaCh02G011160 vs. NCBI nr
Match: gi|659074420|ref|XP_008437594.1| (PREDICTED: protein BOBBER 1 [Cucumis melo])

HSP 1 Score: 528.5 bits (1360), Expect = 8.2e-147
Identity = 279/320 (87.19%), Postives = 296/320 (92.50%), Query Frame = 1


Query: 1   MAIISEYEEKEEIPKPKKPSSSSSSPPSSSSSKPSQFSANFDPSNPLGFLNEVFDFLAKE 60
           MAIIS+YEEKEEIPKPK+PSSSSS P SSSS+KPSQF+ANFDPSNPLGFL +VFDFLA E
Sbjct: 1   MAIISDYEEKEEIPKPKRPSSSSS-PSSSSSAKPSQFNANFDPSNPLGFLEKVFDFLANE 60

Query: 61  SDFLSRDRVEKEIETVVRRAVEKRKKHVESLELKGKAEKRIKEEVGSVKQEAAPVTVKQD 120
           +DFLS DRVEK+IETVVRRAVEKRKKH ESLELKGKAEKRIKEEV SVKQEAAP      
Sbjct: 61  TDFLSNDRVEKDIETVVRRAVEKRKKHEESLELKGKAEKRIKEEVKSVKQEAAPA----- 120

Query: 121 PRNVASPPEEKVDVKLEESTEEKKEENGPRVPNNGNGLDMENYCWTQSLQEVNINVPVPK 180
            + VASPPEEKV  KLEE TEEKKE+NGPRVPN GNGLDM+NY WTQSLQEVN+NVPVPK
Sbjct: 121 -KAVASPPEEKVGEKLEEVTEEKKEDNGPRVPNKGNGLDMDNYSWTQSLQEVNVNVPVPK 180

Query: 181 GTKSRFVVCEIKKNHLKVGLKGQPPVIDGELYQIVKPDDCYWSIEDQSVISILLTKHNQM 240
           GTKSRFVVCEIKKN LKVGLKGQPPVIDGEL   VKPDDCYWSIED+S+ISILLTKHNQM
Sbjct: 181 GTKSRFVVCEIKKNRLKVGLKGQPPVIDGELCHTVKPDDCYWSIEDESIISILLTKHNQM 240

Query: 241 EWWKYLIKGEPEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLPTSDEMQKQD 300
           EWWKYL+KG+PEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLPTSDEMQKQ+
Sbjct: 241 EWWKYLVKGDPEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLPTSDEMQKQE 300

Query: 301 ILKKFMAEHPEMDFSRAKIS 321
           ILKKFM+EHPEMDFSRAKIS
Sbjct: 301 ILKKFMSEHPEMDFSRAKIS 313

[Close]

BLAST of CmaCh02G011160 vs. NCBI nr
Match: gi|778698896|ref|XP_011654620.1| (PREDICTED: protein BOBBER 1 [Cucumis sativus])

HSP 1 Score: 525.8 bits (1353), Expect = 5.3e-146
Identity = 278/321 (86.60%), Postives = 297/321 (92.52%), Query Frame = 1


Query: 1   MAIISEYEEKEEIPKPKKPSSSSSSPPSSSSS-KPSQFSANFDPSNPLGFLNEVFDFLAK 60
           MAIIS+YEEKEEIPKPKKPSSSSSS PSSSSS KPSQF+A+FDPSNPLGFL +VFDFLA 
Sbjct: 1   MAIISDYEEKEEIPKPKKPSSSSSSSPSSSSSPKPSQFNASFDPSNPLGFLEKVFDFLAN 60

Query: 61  ESDFLSRDRVEKEIETVVRRAVEKRKKHVESLELKGKAEKRIKEEVGSVKQEAAPVTVKQ 120
           E+DFLS+DRVEK+IETVVRRAVEKRKKH ESLELKGKAEKRIKEEV SVK+EAAPV    
Sbjct: 61  ETDFLSKDRVEKDIETVVRRAVEKRKKHDESLELKGKAEKRIKEEVKSVKEEAAPV---- 120

Query: 121 DPRNVASPPEEKVDVKLEESTEEKKEENGPRVPNNGNGLDMENYCWTQSLQEVNINVPVP 180
             +  ASPPEEKV  KLEE+TEEKKEENG RVPN GNGLDM+NY WTQSLQEVN+NVPVP
Sbjct: 121 --KAAASPPEEKVGEKLEENTEEKKEENGARVPNKGNGLDMDNYSWTQSLQEVNVNVPVP 180

Query: 181 KGTKSRFVVCEIKKNHLKVGLKGQPPVIDGELYQIVKPDDCYWSIEDQSVISILLTKHNQ 240
           KGTKSRFVVCEIKKN LKVGLKGQPPVID EL   VKPDDCYWSIED+S++SILLTKHNQ
Sbjct: 181 KGTKSRFVVCEIKKNRLKVGLKGQPPVIDAELCHTVKPDDCYWSIEDESIVSILLTKHNQ 240

Query: 241 MEWWKYLIKGEPEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLPTSDEMQKQ 300
           MEWWKYL+KG+PEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLPTSDEMQKQ
Sbjct: 241 MEWWKYLVKGDPEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLPTSDEMQKQ 300

Query: 301 DILKKFMAEHPEMDFSRAKIS 321
           +ILKKFM+EHPEMDFSRAKIS
Sbjct: 301 EILKKFMSEHPEMDFSRAKIS 315

[Close]

BLAST of CmaCh02G011160 vs. NCBI nr
Match: gi|1000979057|ref|XP_015571366.1| (PREDICTED: protein BOBBER 1 isoform X2 [Ricinus communis])

HSP 1 Score: 392.5 bits (1007), Expect = 7.0e-106
Identity = 214/321 (66.67%), Postives = 250/321 (77.88%), Query Frame = 1


Query: 1   MAIISEYEEKEEIPKPKKPSSSSSSPPSSSSSKPSQFSANFDPSNPLGFLNEVFDFLAKE 60
           MAIIS+Y+E+E   KP       ++ PSSSSSK   F+A FDP NP+G + +VF+FL  E
Sbjct: 1   MAIISDYQEEEREMKP-------AASPSSSSSKTLPFNATFDPKNPIGIVEKVFEFLLTE 60

Query: 61  SDFLSRDRVEKEIETVVRRAVEKRKKHVESLEL-KGKAEKRIKEEVGSVKQEAAPVTVKQ 120
           SDF++RD  EKEI  VV+ A EK K+     E  K  A K++KEEV +         VKQ
Sbjct: 61  SDFMARDSAEKEIVAVVKAAKEKSKRKTAEAERDKAAALKKVKEEVKA--------EVKQ 120

Query: 121 DPRNVASPPEEKVDVKLEESTEEKKEENGPRVPNNGNGLDMENYCWTQSLQEVNINVPVP 180
           + + V    E K     +E TE +KEE GPRVPN GNGLD+E Y WTQ+LQEVNI VPVP
Sbjct: 121 EKKEVKQEREVK-----QEPTEIEKEETGPRVPNKGNGLDLEKYSWTQTLQEVNIQVPVP 180

Query: 181 KGTKSRFVVCEIKKNHLKVGLKGQPPVIDGELYQIVKPDDCYWSIEDQSVISILLTKHNQ 240
            GTKSRFVVC+IKKNHLKVGLKGQPP+I+GELY+ +K DDCYWSIEDQ+ IS+LLTKH+Q
Sbjct: 181 PGTKSRFVVCDIKKNHLKVGLKGQPPIIEGELYKPIKVDDCYWSIEDQNTISVLLTKHDQ 240

Query: 241 MEWWKYLIKGEPEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLPTSDEMQKQ 300
           +EWWK L+KG+PEIDTQKVEPENSKL+DLDPETRQTVEKMMFDQRQKSMGLPTSDEMQKQ
Sbjct: 241 LEWWKCLVKGDPEIDTQKVEPENSKLADLDPETRQTVEKMMFDQRQKSMGLPTSDEMQKQ 300

Query: 301 DILKKFMAEHPEMDFSRAKIS 321
           +ILKKFMAEHPEMDFSRAKIS
Sbjct: 301 EILKKFMAEHPEMDFSRAKIS 301

[Close]

BLAST of CmaCh02G011160 vs. NCBI nr
Match: gi|1000979055|ref|XP_002513546.2| (PREDICTED: protein BOBBER 1 isoform X1 [Ricinus communis])

HSP 1 Score: 391.7 bits (1005), Expect = 1.2e-105
Identity = 215/326 (65.95%), Postives = 252/326 (77.30%), Query Frame = 1


Query: 1   MAIISEYEEKEEIPKPKKPSSSSSSPPSSSSSKPSQFSANFDPSNPLGFLNEVFDFLAKE 60
           MAIIS+Y+E+E   KP       ++ PSSSSSK   F+A FDP NP+G + +VF+FL  E
Sbjct: 1   MAIISDYQEEEREMKP-------AASPSSSSSKTLPFNATFDPKNPIGIVEKVFEFLLTE 60

Query: 61  SDFLSRDRVEKEIETVVRRAVEK-RKKHVESLELKGKAEKRIKEEV-GSVKQEAAPV--- 120
           SDF++RD  EKEI  VV+ A EK ++K  E+   K  A K++KEEV   VKQE   V   
Sbjct: 61  SDFMARDSAEKEIVAVVKAAKEKSKRKTAEAERDKAAALKKVKEEVKAEVKQEKKEVKQE 120

Query: 121 -TVKQDPRNVASPPEEKVDVKLEESTEEKKEENGPRVPNNGNGLDMENYCWTQSLQEVNI 180
             VKQ+P  +         + +E      KEE GPRVPN GNGLD+E Y WTQ+LQEVNI
Sbjct: 121 REVKQEPTEIEKEETGPRGINIE------KEETGPRVPNKGNGLDLEKYSWTQTLQEVNI 180

Query: 181 NVPVPKGTKSRFVVCEIKKNHLKVGLKGQPPVIDGELYQIVKPDDCYWSIEDQSVISILL 240
            VPVP GTKSRFVVC+IKKNHLKVGLKGQPP+I+GELY+ +K DDCYWSIEDQ+ IS+LL
Sbjct: 181 QVPVPPGTKSRFVVCDIKKNHLKVGLKGQPPIIEGELYKPIKVDDCYWSIEDQNTISVLL 240

Query: 241 TKHNQMEWWKYLIKGEPEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLPTSD 300
           TKH+Q+EWWK L+KG+PEIDTQKVEPENSKL+DLDPETRQTVEKMMFDQRQKSMGLPTSD
Sbjct: 241 TKHDQLEWWKCLVKGDPEIDTQKVEPENSKLADLDPETRQTVEKMMFDQRQKSMGLPTSD 300

Query: 301 EMQKQDILKKFMAEHPEMDFSRAKIS 321
           EMQKQ+ILKKFMAEHPEMDFSRAKIS
Sbjct: 301 EMQKQEILKKFMAEHPEMDFSRAKIS 313

[Close]

BLAST of CmaCh02G011160 vs. NCBI nr
Match: gi|1012215612|ref|XP_015934358.1| (PREDICTED: protein BOBBER 1 [Arachis duranensis])

HSP 1 Score: 388.3 bits (996), Expect = 1.3e-104
Identity = 211/329 (64.13%), Postives = 245/329 (74.47%), Query Frame = 1


Query: 1   MAIISEYEEKEEIPKPKKPSSSSSSPPSSSSSKPSQFSANFDPSNPLGFLNEVFDFLAKE 60
           MAIIS++ E +      KPSSSSS PPSSSSS  S FSA+FDPSNP+ FL +VFDF+ +E
Sbjct: 1   MAIISDFNEDDHKETRTKPSSSSSQPPSSSSSSSSSFSASFDPSNPVAFLQKVFDFVNQE 60

Query: 61  SDFLSRDRVEKEIETVVRRAVEKRKKHVESL--------ELKGKAEKRIKEEVGSVKQEA 120
           SDF   D  EKEI ++     +KRKK  E L        E K KAEKR+KEE        
Sbjct: 61  SDFFGTDAAEKEIASLAHATRDKRKKKAEELKAAAAAEAEAKKKAEKRLKEE-------- 120

Query: 121 APVTVKQDPRNVASPPEEKVDVKLEESTEEKKEENGPR-VPNNGNGLDMENYCWTQSLQE 180
                                 + E + + KK+E+  + VPN GNG+D+E Y WTQ+LQE
Sbjct: 121 ---------------------KEHESAQDTKKQESAAKIVPNKGNGMDLEKYSWTQTLQE 180

Query: 181 VNINVPVPKGTKSRFVVCEIKKNHLKVGLKGQPPVIDGELYQIVKPDDCYWSIEDQSVIS 240
           V +NVPVP GTKSRFV+CEIKKNH+KVGLKGQPP+I+GELY+ VKPDDCYWSIEDQS IS
Sbjct: 181 VTVNVPVPSGTKSRFVICEIKKNHIKVGLKGQPPIIEGELYKPVKPDDCYWSIEDQSAIS 240

Query: 241 ILLTKHNQMEWWKYLIKGEPEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLP 300
           ILLTKH+QMEWWK L+KG+PEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLP
Sbjct: 241 ILLTKHDQMEWWKCLVKGDPEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLP 300

Query: 301 TSDEMQKQDILKKFMAEHPEMDFSRAKIS 321
           TSDE+QKQ++LKKFMAEHPEMDFSRAKI+
Sbjct: 301 TSDELQKQELLKKFMAEHPEMDFSRAKIA 300

The following BLAST results are available for this feature:

BLAST of CmaCh02G011160 vs. Swiss-Prot


Match Name	E-value	Identity	Description
BOB1_ARATH	3.4e-92	59.20	Protein BOBBER 1 OS=Arabidopsis thaliana GN=BOB1 PE=1 SV=1	[more]
BOB2_ARATH	5.8e-84	54.63	Protein BOBBER 2 OS=Arabidopsis thaliana GN=BOB2 PE=2 SV=1	[more]
NUDC_MOUSE	9.6e-55	47.83	Nuclear migration protein nudC OS=Mus musculus GN=Nudc PE=1 SV=1	[more]
NUDC_CHICK	2.8e-54	43.41	Nuclear migration protein nudC OS=Gallus gallus GN=NUDC PE=2 SV=1	[more]
NUDC_RAT	8.2e-54	47.06	Nuclear migration protein nudC OS=Rattus norvegicus GN=Nudc PE=1 SV=1	[more]

BLAST of CmaCh02G011160 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KQ62_CUCSA	3.7e-146	86.60	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G139440 PE=4 SV=1	[more]
A0A151TS61_CAJCA	2.3e-103	63.13	Nuclear migration protein nudC OS=Cajanus cajan GN=KK1_009103 PE=4 SV=1	[more]
A0A061G2U6_THECC	1.9e-102	63.95	HSP20-like chaperones superfamily protein isoform 1 OS=Theobroma cacao GN=TCM_01...	[more]
A0A059DEY7_EUCGR	9.6e-102	63.80	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_A01460 PE=4 SV=1	[more]
V4TLN9_9ROSI	2.1e-101	64.24	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10021271mg PE=4 SV=1	[more]

BLAST of CmaCh02G011160 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G53400.1	1.9e-93	59.20	HSP20-like chaperones superfamily protein	[more]
AT4G27890.1	3.3e-85	54.63	HSP20-like chaperones superfamily protein	[more]
AT5G58740.1	9.7e-13	31.68	HSP20-like chaperones superfamily protein	[more]
AT2G27280.1	3.6e-07	41.18	Coiled-coil domain-containing protein 55 (DUF2040)	[more]

BLAST of CmaCh02G011160 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659074420\|ref\|XP_008437594.1\|	8.2e-147	87.19	PREDICTED: protein BOBBER 1 [Cucumis melo]	[more]
gi\|778698896\|ref\|XP_011654620.1\|	5.3e-146	86.60	PREDICTED: protein BOBBER 1 [Cucumis sativus]	[more]
gi\|1000979057\|ref\|XP_015571366.1\|	7.0e-106	66.67	PREDICTED: protein BOBBER 1 isoform X2 [Ricinus communis]	[more]
gi\|1000979055\|ref\|XP_002513546.2\|	1.2e-105	65.95	PREDICTED: protein BOBBER 1 isoform X1 [Ricinus communis]	[more]
gi\|1012215612\|ref\|XP_015934358.1\|	1.3e-104	64.13	PREDICTED: protein BOBBER 1 [Arachis duranensis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR007052	CS_dom
IPR008978	HSP20-like_chaperone

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh02G011160.1	CmaCh02G011160.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007052	CS domain	PFAM	PF04969	CS	coord: 162..236 score: 4.6
IPR007052	CS domain	PROFILE	PS51203	CS	coord: 158..247 score: 17
IPR008978	HSP20-like chaperone	GENE3D	G3DSA:2.60.40.790		coord: 155..282 score: 2.4
IPR008978	HSP20-like chaperone	unknown	SSF49764	HSP20-like chaperones	coord: 149..262 score: 3.66
None	No IPR available	unknown	Coil	Coil	coord: 66..86 scor
None	No IPR available	PANTHER	PTHR12356	NUCLEAR MOVEMENT PROTEIN NUDC	coord: 42..320 score: 3.3E
None	No IPR available	PANTHER	PTHR12356:SF3	NUCLEAR MIGRATION PROTEIN NUDC	coord: 42..320 score: 3.3E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh02G011160	Cucsa.202110	Cucumber (Gy14) v1	cgycmaB0602
CmaCh02G011160	Cla004897	Watermelon (97103) v1	cmawmB574
CmaCh02G011160	Csa5G139440	Cucumber (Chinese Long) v2	cmacuB612
CmaCh02G011160	MELO3C005884	Melon (DHL92) v3.5.1	cmameB527
CmaCh02G011160	ClCG01G000450	Watermelon (Charleston Gray)	cmawcgB523
CmaCh02G011160	CSPI05G03180	Wild cucumber (PI 183967)	cmacpiB618
CmaCh02G011160	CmoCh02G011440	Cucurbita moschata (Rifu)	cmacmoB619
CmaCh02G011160	CmoCh15G010910	Cucurbita moschata (Rifu)	cmacmoB584
CmaCh02G011160	Lsi09G000240	Bottle gourd (USVL1VR-Ls)	cmalsiB536
CmaCh02G011160	Cp4.1LG13g03130	Cucurbita pepo (Zucchini)	cmacpeB602
CmaCh02G011160	Cp4.1LG05g06030	Cucurbita pepo (Zucchini)	cmacpeB646
CmaCh02G011160	MELO3C005884.2	Melon (DHL92) v3.6.1	cmamedB605
CmaCh02G011160	CsaV3_5G000520	Cucumber (Chinese Long) v3	cmacucB0735
CmaCh02G011160	Cla97C01G000490	Watermelon (97103) v2	cmawmbB604
CmaCh02G011160	Bhi12G000558	Wax gourd	cmawgoB0710
CmaCh02G011160	CsGy5G000430	Cucumber (Gy14) v2	cgybcmaB639
CmaCh02G011160	Carg14016	Silver-seed gourd	carcmaB0716
CmaCh02G011160	Carg26210	Silver-seed gourd	carcmaB0417

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmaCh02G011160	CmaCh15G010280	Cucurbita maxima (Rimu)	cmacmaB313

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh02G011160	Cucurbita moschata (Rifu)	cmacmoB587
CmaCh02G011160	Cucurbita moschata (Rifu)	cmacmoB591
CmaCh02G011160	Melon (DHL92) v3.5.1	cmameB579
CmaCh02G011160	Watermelon (Charleston Gray)	cmawcgB559
CmaCh02G011160	Watermelon (Charleston Gray)	cmawcgB563
CmaCh02G011160	Watermelon (97103) v1	cmawmB564
CmaCh02G011160	Cucurbita pepo (Zucchini)	cmacpeB598
CmaCh02G011160	Cucurbita pepo (Zucchini)	cmacpeB608
CmaCh02G011160	Cucurbita pepo (Zucchini)	cmacpeB639
CmaCh02G011160	Bottle gourd (USVL1VR-Ls)	cmalsiB583
CmaCh02G011160	Bottle gourd (USVL1VR-Ls)	cmalsiB584
CmaCh02G011160	Cucumber (Gy14) v2	cgybcmaB401
CmaCh02G011160	Cucumber (Gy14) v2	cgybcmaB644
CmaCh02G011160	Melon (DHL92) v3.6.1	cmamedB664
CmaCh02G011160	Silver-seed gourd	carcmaB0756
CmaCh02G011160	Silver-seed gourd	carcmaB1369
CmaCh02G011160	Cucumber (Chinese Long) v3	cmacucB0721
CmaCh02G011160	Cucumber (Chinese Long) v3	cmacucB0723
CmaCh02G011160	Watermelon (97103) v2	cmawmbB649
CmaCh02G011160	Watermelon (97103) v2	cmawmbB652
CmaCh02G011160	Wax gourd	cmawgoB0727
CmaCh02G011160	Cucurbita maxima (Rimu)	cmacmaB263
CmaCh02G011160	Cucurbita maxima (Rimu)	cmacmaB346
CmaCh02G011160	Cucurbita maxima (Rimu)	cmacmaB396