CmaCh01G015590.1 (mRNA) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh01G015590.1
Type	mRNA
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Transmembrane protein, putative
Location	Cma_Chr01 : 10831275 .. 10833091 (-)
Sequence length	974

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTGTTTCTGTTAAATTGATGTCTCTTATTGTTGGAACTTTGGGTGTGATATCCTTTATATTTGGAATCGTTGCCGAAAACAAGAAGGTAAGCATCTGTAATCTTTGTAAACAAGCATACCGCCTTAGCAGTTATTCGCTTTTTAATATACATATCTATTCATTTAAAACTGTTGACCGCAAGATTCAATATTGATTTAATTAGTCTATGAGATCCGGAAACTTCTTCCTAGTAGACATTTTAAAAACCTTGAGAAGCTTGAAAGGGAAAGCCCAAAGAGGACAATATTACTAGCGGTGAGCTTGGGTCGTTACATAGTCCCTCGTCTATGTGTGGGAGCAGTTATATGAAATCTATGTTGGCTGTGGATATGGTAGTCAGTGGTTTAATGGTCACTAACTTGTTTTCCTATCTTTACTTGGATTTGAGCAGCCTGCATCTGGAACTCTCATCCCAGGCAAAGGCCTTGTTATCTGTAAATATCCTGGCGACCCGACGGTTGCCTTGGGATTTCTATCTTTTCTGTTTCTTCTTGCTTCTTCCATTGCGGGATACACCTCTCTGTTCTATCCTTACCAAGGAAAATCGGTTCCTCGAGGAGCGATGTTTAAGAACGGTAGTTTCTCTGTGTTCTTCAACGTTGCTCAGTAAGTTCTCTTTTGGAGGCACTTCCCTTTCTCTGACTGTTAACTAAATCATCTTAGCTTTGTATTCTTTATTAGAATGAATGATGTTACAAAATGATGCCCCCTAGTACATTATAGATCATGACAATTCTGCATCCTTCCATATAAACTACTTCTTCAGTTGGGTTTGTGTAGTTTATGTTGTAAGTTTTGGCTTCCACCCGTGGATGTAAGGAAATTTCTTTCATTCGAATCATGTAAATTTTTGTGTCTGTTTGTTTAATTTCTATTTGTGGGTGTATGAGTGCGATCAATCTTGCTTCCACTTCCACTTCCGCTACAACAATTGGATATCAGAGCATTTTTTTGTTGGTTACGAACCGTTTACGCATCACAAATCATTACCCTTTTCCGAAACATTTCTTGTAGAGGGGTCTATGCTTGTTATGATTTCATTCATGTAGCTTCTACAAGGCATTAAAGTGTAGCACATATTGAAGCACCCTCTCTATTTTGCAGATTCACAACTGGATTAGCTATTGCTTTGCTGGTATGGCCCACGGTCACAGAGCAACTTCACTTGATGCATAACATTCATCACAATGATGTGACAAAGTGCCCGACCGCTAAGACCGGTCTTCTAGGTGGCGGTGCATTTCTATCCCTGGATTCATGCCTCTTCTGGCTGGTTGCTCTGATGTTGGCTGGAAATGCACGAGAGGACTACTTTAATGAAATAGAAGAAAAAGAAAGCAATGCTCAAGCTCTCAAGAGCAGTGCATGAACCTCTTCTCTGTTTGGTGAGAATAATAAATTTTGTCTCTTTACTATGGGTTTTTAGTTGTTATTAGGCAGGGATTTATCCGTGAGTATGGTAATTCTTCTTTGGAATTTTACTGTTAAGCTGCAGGCTCTTAATCCATCCTAGTGGTGCACTTAGGTCAACCTTAGTTACAATTCTAGTGCTCAACTTTCTCAGCTTAGTTAGGCTTGGTCTCGGCATTTTTCCGTCTTTTTTCAACCGGATGAAGCGGATATTCGAACATTCGACTTTTAGATACATATATATAGTGTCTTAGGACATGTTTGATGGGTAGTTTGAATTCGATCTTGTATTTACAAATTCACTTAGATCGGTGAATATACTTTGTAGATGTGTTGTTTTAAATTATTTTTCGAATTTTGTGA

mRNA sequence

ATGGCTGTTTCTGTTAAATTGATGTCTCTTATTGTTGGAACTTTGGGTGTGATATCCTTTATATTTGGAATCGTTGCCGAAAACAAGAAGCCTGCATCTGGAACTCTCATCCCAGGCAAAGGCCTTGTTATCTGTAAATATCCTGGCGACCCGACGGTTGCCTTGGGATTTCTATCTTTTCTGTTTCTTCTTGCTTCTTCCATTGCGGGATACACCTCTCTGTTCTATCCTTACCAAGGAAAATCGGTTCCTCGAGGAGCGATGTTTAAGAACGGTAGTTTCTCTGTGTTCTTCAACGTTGCTCAATTCACAACTGGATTAGCTATTGCTTTGCTGGTATGGCCCACGGTCACAGAGCAACTTCACTTGATGCATAACATTCATCACAATGATGTGACAAAGTGCCCGACCGCTAAGACCGGTCTTCTAGGTGGCGGTGCATTTCTATCCCTGGATTCATGCCTCTTCTGGCTGGTTGCTCTGATGTTGGCTGGAAATGCACGAGAGGACTACTTTAATGAAATAGAAGAAAAAGAAAGCAATGCTCAAGCTCTCAAGAGCAGTGCATGAACCTCTTCTCTGTTTGGTGAGAATAATAAATTTTGTCTCTTTACTATGGGTTTTTAGTTGTTATTAGGCAGGGATTTATCCGTGAGTATGGTAATTCTTCTTTGGAATTTTACTGTTAAGCTGCAGGCTCTTAATCCATCCTAGTGGTGCACTTAGGTCAACCTTAGTTACAATTCTAGTGCTCAACTTTCTCAGCTTAGTTAGGCTTGGTCTCGGCATTTTTCCGTCTTTTTTCAACCGGATGAAGCGGATATTCGAACATTCGACTTTTAGATACATATATATAGTGTCTTAGGACATGTTTGATGGGTAGTTTGAATTCGATCTTGTATTTACAAATTCACTTAGATCGGTGAATATACTTTGTAGATGTGTTGTTTTAAATTATTTTTCGAATTTTGTGA

Coding sequence (CDS)

ATGGCTGTTTCTGTTAAATTGATGTCTCTTATTGTTGGAACTTTGGGTGTGATATCCTTTATATTTGGAATCGTTGCCGAAAACAAGAAGCCTGCATCTGGAACTCTCATCCCAGGCAAAGGCCTTGTTATCTGTAAATATCCTGGCGACCCGACGGTTGCCTTGGGATTTCTATCTTTTCTGTTTCTTCTTGCTTCTTCCATTGCGGGATACACCTCTCTGTTCTATCCTTACCAAGGAAAATCGGTTCCTCGAGGAGCGATGTTTAAGAACGGTAGTTTCTCTGTGTTCTTCAACGTTGCTCAATTCACAACTGGATTAGCTATTGCTTTGCTGGTATGGCCCACGGTCACAGAGCAACTTCACTTGATGCATAACATTCATCACAATGATGTGACAAAGTGCCCGACCGCTAAGACCGGTCTTCTAGGTGGCGGTGCATTTCTATCCCTGGATTCATGCCTCTTCTGGCTGGTTGCTCTGATGTTGGCTGGAAATGCACGAGAGGACTACTTTAATGAAATAGAAGAAAAAGAAAGCAATGCTCAAGCTCTCAAGAGCAGTGCATGA

Protein sequence

MAVSVKLMSLIVGTLGVISFIFGIVAENKKPASGTLIPGKGLVICKYPGDPTVALGFLSFLFLLASSIAGYTSLFYPYQGKSVPRGAMFKNGSFSVFFNVAQFTTGLAIALLVWPTVTEQLHLMHNIHHNDVTKCPTAKTGLLGGGAFLSLDSCLFWLVALMLAGNAREDYFNEIEEKESNAQALKSSA

Homology

[Close]

BLAST of CmaCh01G015590.1 vs. TrEMBL
Match: A0A0A0LHD9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G881600 PE=4 SV=1)

HSP 1 Score: 310.5 bits (794), Expect = 1.4e-81
Identity = 156/189 (82.54%), Postives = 168/189 (88.89%), Query Frame = 1


Query: 1   MAVSVKLMSLIVGTLGVISFIFGIVAENKKPASGTLIPGKGLVICKYPGDPTVALGFLSF 60
           MAVSVKLMSLIV  LGV SFIFG++AENKKPASGT IPGKG+VIC+YPGDPTV LG+LS 
Sbjct: 1   MAVSVKLMSLIVAALGVTSFIFGVIAENKKPASGTPIPGKGIVICQYPGDPTVVLGYLSV 60

Query: 61  LFLLASSIAGYTSLFYPYQGKSVPRGAMFKNGSFSVFFNVAQFTTGLAIALLVWPTVTEQ 120
            FLLASS AGY SLFYPYQGKSVPRGAMFK+ SFS FFN+A FTTGLAI LLVWPTVTEQ
Sbjct: 61  AFLLASSAAGYLSLFYPYQGKSVPRGAMFKSSSFSTFFNIALFTTGLAITLLVWPTVTEQ 120

Query: 121 LHLMHNIHHNDVTKCPTAKTGLLGGGAFLSLDSCLFWLVALMLAGNAREDYFNEIEEKES 180
           LHL  N+HHN  T CPTAKTGLLGGGAFLSLDS LFWLVALMLAGNAREDYF+EI EK S
Sbjct: 121 LHLTRNVHHNIETACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIAEKGS 180

Query: 181 NAQALKSSA 190
           N+++LKSSA
Sbjct: 181 NSESLKSSA 189

[Close]

BLAST of CmaCh01G015590.1 vs. TrEMBL
Match: A0A0A0LEF8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G881610 PE=4 SV=1)

HSP 1 Score: 298.9 bits (764), Expect = 4.4e-78
Identity = 152/190 (80.00%), Postives = 167/190 (87.89%), Query Frame = 1


Query: 1   MAVSVKLMSLIVGTLGVISFIFGIVAENKKPASGTLIPGKGLVICKYPGDPTVALGFLSF 60
           MAVSVKLMSL+VGTLGVISF+FG+VAENKKPASGT IPGKG V+CKY  DPTVALGFLSF
Sbjct: 1   MAVSVKLMSLLVGTLGVISFVFGVVAENKKPASGTPIPGKGHVVCKYQSDPTVALGFLSF 60

Query: 61  LFLLASSIAGYTSLFYPYQGKSVPRGAMFKNGSFSVFFNVAQFTTGLAIALLVWPTVTEQ 120
           +FLLASS AGY SLFYPY+GKSVPRGA FK+ +F  FFN+A FTTGLAI +LVWPTVTEQ
Sbjct: 61  MFLLASSCAGYLSLFYPYEGKSVPRGAFFKSSTFFAFFNIALFTTGLAITMLVWPTVTEQ 120

Query: 121 LHLMHNIHHNDVTKCPTAKTGLLGGGAFLSLDSCLFWLVALMLAGNAREDYFNEIEEK-E 180
           LHL  N+H N  T CPTAKTGLLGGGAFLSLDS LFWLVALMLAGNAREDYF+EI EK  
Sbjct: 121 LHLTRNVHFNLDTACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIAEKGT 180

Query: 181 SNAQALKSSA 190
           +N +A+KSSA
Sbjct: 181 TNVEAVKSSA 190

[Close]

BLAST of CmaCh01G015590.1 vs. TrEMBL
Match: A0A067KRQ1_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_11059 PE=4 SV=1)

HSP 1 Score: 270.0 bits (689), Expect = 2.2e-69
Identity = 128/177 (72.32%), Postives = 155/177 (87.57%), Query Frame = 1


Query: 1   MAVSVKLMSLIVGTLGVISFIFGIVAENKKPASGTLIPGKGLVICKYPGDPTVALGFLSF 60
           MAV+V+ MS+IV TLG +SFIFG++AENKKPA+GT I GKG+VICKYP DPTVALG+LSF
Sbjct: 1   MAVTVRQMSVIVATLGTLSFIFGVIAENKKPAAGTPITGKGVVICKYPSDPTVALGYLSF 60

Query: 61  LFLLASSIAGYTSLFYPYQGKSVPRGAMFKNGSFSVFFNVAQFTTGLAIALLVWPTVTEQ 120
            FL+ S++AG+ SLFYPY+GKS+P+ A+F++ SF VFFN+A FT GLA ALL+WPT+TEQ
Sbjct: 61  AFLVLSALAGFWSLFYPYKGKSIPQSALFQSTSFVVFFNIAVFTAGLAAALLLWPTITEQ 120

Query: 121 LHLMHNIHHNDVTKCPTAKTGLLGGGAFLSLDSCLFWLVALMLAGNAREDYFNEIEE 178
           LHLM  +HHN  T CPTAKTGLLGGGAF+SLDS LFWLVALMLA NAREDYF+E+E+
Sbjct: 121 LHLMRKVHHNMETDCPTAKTGLLGGGAFISLDSALFWLVALMLADNAREDYFDEVEK 177

[Close]

BLAST of CmaCh01G015590.1 vs. TrEMBL
Match: K4CI89_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1)

HSP 1 Score: 266.2 bits (679), Expect = 3.1e-68
Identity = 129/178 (72.47%), Postives = 150/178 (84.27%), Query Frame = 1


Query: 1   MAVSVKLMSLIVGTLGVISFIFGIVAENKKPASGTLIPGKGLVICKYPGDPTVALGFLSF 60
           MA+ +K MS+I+ TLGV+SFIFG++AENKKPA+GT I GKG+VICKY  DPTVALG+LSF
Sbjct: 1   MAIGMKQMSMIIATLGVLSFIFGVIAENKKPAAGTAISGKGVVICKYKSDPTVALGYLSF 60

Query: 61  LFLLASSIAGYTSLFYPYQGKSVPRGAMFKNGSFSVFFNVAQFTTGLAIALLVWPTVTEQ 120
           +FL ASS+AG+ SLFYPYQGKSVP+ A+ +N SF VF N+A  TTGLA  LL+WPT+TEQ
Sbjct: 61  VFLAASSVAGFLSLFYPYQGKSVPQAALLRNTSFLVFLNIALGTTGLAATLLLWPTITEQ 120

Query: 121 LHLMHNIHHNDVTKCPTAKTGLLGGGAFLSLDSCLFWLVALMLAGNAREDYFNEIEEK 179
           LH+  NIHHN  T CPTAKTGLLGGGAFLSLDS LFWLVALMLA NAREDYF E + K
Sbjct: 121 LHITRNIHHNLQTDCPTAKTGLLGGGAFLSLDSALFWLVALMLADNAREDYFQETDIK 178

[Close]

BLAST of CmaCh01G015590.1 vs. TrEMBL
Match: M1B6Y2_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400014853 PE=4 SV=1)

HSP 1 Score: 265.8 bits (678), Expect = 4.1e-68
Identity = 136/195 (69.74%), Postives = 158/195 (81.03%), Query Frame = 1


Query: 1   MAVSVKLMSLIVGTLGVISFIFGIVAENKKPASGTLIPGKGLVICKYPGDPTVALGFLSF 60
           MA+ +K MS+I+ TLGV+SFIFG++AENKKPA+GT I GKG+VICKY  DPTVALG+LSF
Sbjct: 1   MAIGMKQMSMIIATLGVLSFIFGVIAENKKPAAGTAISGKGVVICKYKSDPTVALGYLSF 60

Query: 61  LFLLASSIAGYTSLFYPYQGKSVPRGAMFKNGSFSVFFNVAQFTTGLAIALLVWPTVTEQ 120
           +FL ASS+AG+ SLFYPYQGKSVP+ A+ +N SF VF N+A  TTGLA  LL+WPT+TEQ
Sbjct: 61  VFLAASSVAGFLSLFYPYQGKSVPQAALLRNTSFVVFLNIALGTTGLAATLLLWPTITEQ 120

Query: 121 LHLMHNIHHNDVTKCPTAKTGLLGGGAFLSLDSCLFWLVALMLAGNAREDYFNEI----E 180
           LH+  NIHHN  T CPTAKTGLLGGGAFLSLDS LFWLVALMLA NAREDYF E     E
Sbjct: 121 LHITRNIHHNLQTDCPTAKTGLLGGGAFLSLDSALFWLVALMLADNAREDYFQETNVKGE 180

Query: 181 EKESNA--QALKSSA 190
            K S A  + +KSSA
Sbjct: 181 PKASYADDEIIKSSA 195

[Close]

BLAST of CmaCh01G015590.1 vs. TAIR10
Match: AT4G31130.1 (AT4G31130.1 Protein of unknown function (DUF1218))

HSP 1 Score: 263.1 bits (671), Expect = 1.3e-70
Identity = 126/178 (70.79%), Postives = 151/178 (84.83%), Query Frame = 1


Query: 1   MAVSVKLMSLIVGTLGVISFIFGIVAENKKPASGTLIPGKGLVICKYPGDPTVALGFLSF 60
           MAVS+K MSL+V  LGV+SF+ G++AENKKPASGT I GKG+VICKYP DPTVALG+LS 
Sbjct: 1   MAVSMKQMSLVVSALGVLSFVLGVIAENKKPASGTPISGKGVVICKYPSDPTVALGYLSA 60

Query: 61  LFLLASSIAGYTSLFYPYQGKSVPRGAMFKNGSFSVFFNVAQFTTGLAIALLVWPTVTEQ 120
            FLLA ++AGY SLF  Y+GKSVP   +FK+ SFSVFFN+A  T+GLA++LL+WPT+TEQ
Sbjct: 61  AFLLACTVAGYKSLFISYKGKSVPNSVLFKSTSFSVFFNIALITSGLALSLLLWPTITEQ 120

Query: 121 LHLMHNIHHNDVTKCPTAKTGLLGGGAFLSLDSCLFWLVALMLAGNAREDYFNEIEEK 179
           LHL  N+H N  T CPTAKTGLLGGGAF+SLDSCLFWLVALMLA NARED+F+E+E +
Sbjct: 121 LHLTRNVHRNLETSCPTAKTGLLGGGAFVSLDSCLFWLVALMLADNAREDHFDEVESR 178

[Close]

BLAST of CmaCh01G015590.1 vs. NCBI nr
Match: gi|449437098|ref|XP_004136329.1| (PREDICTED: uncharacterized protein LOC101222863 [Cucumis sativus])

HSP 1 Score: 310.5 bits (794), Expect = 2.1e-81
Identity = 156/189 (82.54%), Postives = 168/189 (88.89%), Query Frame = 1


Query: 1   MAVSVKLMSLIVGTLGVISFIFGIVAENKKPASGTLIPGKGLVICKYPGDPTVALGFLSF 60
           MAVSVKLMSLIV  LGV SFIFG++AENKKPASGT IPGKG+VIC+YPGDPTV LG+LS 
Sbjct: 1   MAVSVKLMSLIVAALGVTSFIFGVIAENKKPASGTPIPGKGIVICQYPGDPTVVLGYLSV 60

Query: 61  LFLLASSIAGYTSLFYPYQGKSVPRGAMFKNGSFSVFFNVAQFTTGLAIALLVWPTVTEQ 120
            FLLASS AGY SLFYPYQGKSVPRGAMFK+ SFS FFN+A FTTGLAI LLVWPTVTEQ
Sbjct: 61  AFLLASSAAGYLSLFYPYQGKSVPRGAMFKSSSFSTFFNIALFTTGLAITLLVWPTVTEQ 120

Query: 121 LHLMHNIHHNDVTKCPTAKTGLLGGGAFLSLDSCLFWLVALMLAGNAREDYFNEIEEKES 180
           LHL  N+HHN  T CPTAKTGLLGGGAFLSLDS LFWLVALMLAGNAREDYF+EI EK S
Sbjct: 121 LHLTRNVHHNIETACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIAEKGS 180

Query: 181 NAQALKSSA 190
           N+++LKSSA
Sbjct: 181 NSESLKSSA 189

[Close]

BLAST of CmaCh01G015590.1 vs. NCBI nr
Match: gi|659132707|ref|XP_008466341.1| (PREDICTED: uncharacterized protein LOC103503778 [Cucumis melo])

HSP 1 Score: 309.7 bits (792), Expect = 3.5e-81
Identity = 154/189 (81.48%), Postives = 168/189 (88.89%), Query Frame = 1


Query: 1   MAVSVKLMSLIVGTLGVISFIFGIVAENKKPASGTLIPGKGLVICKYPGDPTVALGFLSF 60
           MAVSVKLMSL V  LGV SFIFG++AENKKPASGT IPGKG+VIC+YPGDPTV LG+LS 
Sbjct: 1   MAVSVKLMSLTVAALGVTSFIFGVIAENKKPASGTPIPGKGIVICQYPGDPTVVLGYLSV 60

Query: 61  LFLLASSIAGYTSLFYPYQGKSVPRGAMFKNGSFSVFFNVAQFTTGLAIALLVWPTVTEQ 120
            FLLASS+AGY SLFYPYQGKSVPRGAMFK+ SFS FFN+A FTTGLAI LLVWPTVTEQ
Sbjct: 61  AFLLASSVAGYLSLFYPYQGKSVPRGAMFKSSSFSAFFNIALFTTGLAITLLVWPTVTEQ 120

Query: 121 LHLMHNIHHNDVTKCPTAKTGLLGGGAFLSLDSCLFWLVALMLAGNAREDYFNEIEEKES 180
           LHL  N+HHN  T CPTAKTGLLGGGAFLSLDS LFWLVALMLAGNAREDYF+EI EK +
Sbjct: 121 LHLSRNVHHNTETACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIAEKGT 180

Query: 181 NAQALKSSA 190
           N+++LKSSA
Sbjct: 181 NSESLKSSA 189

[Close]

BLAST of CmaCh01G015590.1 vs. NCBI nr
Match: gi|659132705|ref|XP_008466340.1| (PREDICTED: uncharacterized protein LOC103503777 [Cucumis melo])

HSP 1 Score: 308.1 bits (788), Expect = 1.0e-80
Identity = 155/189 (82.01%), Postives = 168/189 (88.89%), Query Frame = 1


Query: 1   MAVSVKLMSLIVGTLGVISFIFGIVAENKKPASGTLIPGKGLVICKYPGDPTVALGFLSF 60
           MAVSVKLMSL+VGTLGVISF+FG+VAENKKPASGT IPGKGLV+CKY  DPTVALGFLSF
Sbjct: 1   MAVSVKLMSLLVGTLGVISFVFGVVAENKKPASGTPIPGKGLVVCKYQSDPTVALGFLSF 60

Query: 61  LFLLASSIAGYTSLFYPYQGKSVPRGAMFKNGSFSVFFNVAQFTTGLAIALLVWPTVTEQ 120
           LFLLASS AGY SLFYPY+GKSVPRGA FK+ SFS FFN+A FTTGLAI +LVWPTVTEQ
Sbjct: 61  LFLLASSFAGYLSLFYPYEGKSVPRGAFFKSSSFSAFFNIALFTTGLAITMLVWPTVTEQ 120

Query: 121 LHLMHNIHHNDVTKCPTAKTGLLGGGAFLSLDSCLFWLVALMLAGNAREDYFNEIEEKES 180
           LHL  N+H N  T CPTAKTGLLGGGAFLSLDS L WLVALMLAGNAREDYF+EI EK +
Sbjct: 121 LHLTRNVHFNLNTACPTAKTGLLGGGAFLSLDSSLLWLVALMLAGNAREDYFDEIAEKGT 180

Query: 181 NAQALKSSA 190
           N +A+KSSA
Sbjct: 181 NVEAVKSSA 189

[Close]

BLAST of CmaCh01G015590.1 vs. NCBI nr
Match: gi|449437094|ref|XP_004136327.1| (PREDICTED: uncharacterized protein LOC101222453 [Cucumis sativus])

HSP 1 Score: 298.9 bits (764), Expect = 6.3e-78
Identity = 152/190 (80.00%), Postives = 167/190 (87.89%), Query Frame = 1


Query: 1   MAVSVKLMSLIVGTLGVISFIFGIVAENKKPASGTLIPGKGLVICKYPGDPTVALGFLSF 60
           MAVSVKLMSL+VGTLGVISF+FG+VAENKKPASGT IPGKG V+CKY  DPTVALGFLSF
Sbjct: 1   MAVSVKLMSLLVGTLGVISFVFGVVAENKKPASGTPIPGKGHVVCKYQSDPTVALGFLSF 60

Query: 61  LFLLASSIAGYTSLFYPYQGKSVPRGAMFKNGSFSVFFNVAQFTTGLAIALLVWPTVTEQ 120
           +FLLASS AGY SLFYPY+GKSVPRGA FK+ +F  FFN+A FTTGLAI +LVWPTVTEQ
Sbjct: 61  MFLLASSCAGYLSLFYPYEGKSVPRGAFFKSSTFFAFFNIALFTTGLAITMLVWPTVTEQ 120

Query: 121 LHLMHNIHHNDVTKCPTAKTGLLGGGAFLSLDSCLFWLVALMLAGNAREDYFNEIEEK-E 180
           LHL  N+H N  T CPTAKTGLLGGGAFLSLDS LFWLVALMLAGNAREDYF+EI EK  
Sbjct: 121 LHLTRNVHFNLDTACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIAEKGT 180

Query: 181 SNAQALKSSA 190
           +N +A+KSSA
Sbjct: 181 TNVEAVKSSA 190

[Close]

BLAST of CmaCh01G015590.1 vs. NCBI nr
Match: gi|1009136025|ref|XP_015885310.1| (PREDICTED: uncharacterized protein LOC107420778 [Ziziphus jujuba])

HSP 1 Score: 271.9 bits (694), Expect = 8.2e-70
Identity = 131/176 (74.43%), Postives = 154/176 (87.50%), Query Frame = 1


Query: 1   MAVSVKLMSLIVGTLGVISFIFGIVAENKKPASGTLIPGKGLVICKYPGDPTVALGFLSF 60
           MAV+VK MSLIV   GV+SFIFG+VAENKKPASGT I GK +VICKYP DPTV LG+LSF
Sbjct: 1   MAVTVKQMSLIVAFFGVLSFIFGVVAENKKPASGTPITGKDVVICKYPSDPTVVLGYLSF 60

Query: 61  LFLLASSIAGYTSLFYPYQGKSVPRGAMFKNGSFSVFFNVAQFTTGLAIALLVWPTVTEQ 120
            FL+ASS+AG+ SLFYPY+GKS+P+GA+F++ SF VFFN++ FT GLA ALL+WPT+TEQ
Sbjct: 61  AFLIASSLAGFLSLFYPYKGKSLPQGALFRSSSFIVFFNISLFTAGLAAALLLWPTITEQ 120

Query: 121 LHLMHNIHHNDVTKCPTAKTGLLGGGAFLSLDSCLFWLVALMLAGNAREDYFNEIE 177
           LHL +N+HHN  T+CPTAKTGLLGGGAF+SLDS LFWLVALMLA NAREDYF E+E
Sbjct: 121 LHLKNNVHHNLKTECPTAKTGLLGGGAFVSLDSALFWLVALMLADNAREDYFEEVE 176

The following BLAST results are available for this feature:

BLAST of CmaCh01G015590.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmaCh01G015590.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LHD9_CUCSA	1.4e-81	82.54	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G881600 PE=4 SV=1	[more]
A0A0A0LEF8_CUCSA	4.4e-78	80.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G881610 PE=4 SV=1	[more]
A0A067KRQ1_JATCU	2.2e-69	72.32	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_11059 PE=4 SV=1	[more]
K4CI89_SOLLC	3.1e-68	72.47	Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1	[more]
M1B6Y2_SOLTU	4.1e-68	69.74	Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400014853 PE=4 SV=1	[more]

BLAST of CmaCh01G015590.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G31130.1	1.3e-70	70.79	Protein of unknown function (DUF1218)	[more]

BLAST of CmaCh01G015590.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449437098\|ref\|XP_004136329.1\|	2.1e-81	82.54	PREDICTED: uncharacterized protein LOC101222863 [Cucumis sativus]	[more]
gi\|659132707\|ref\|XP_008466341.1\|	3.5e-81	81.48	PREDICTED: uncharacterized protein LOC103503778 [Cucumis melo]	[more]
gi\|659132705\|ref\|XP_008466340.1\|	1.0e-80	82.01	PREDICTED: uncharacterized protein LOC103503777 [Cucumis melo]	[more]
gi\|449437094\|ref\|XP_004136327.1\|	6.3e-78	80.00	PREDICTED: uncharacterized protein LOC101222453 [Cucumis sativus]	[more]
gi\|1009136025\|ref\|XP_015885310.1\|	8.2e-70	74.43	PREDICTED: uncharacterized protein LOC107420778 [Ziziphus jujuba]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR009606	DUF1218

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmaCh01G015590	CmaCh01G015590	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmaCh01G015590.1	CmaCh01G015590.1-protein	polypeptide

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh01G015590.1.three_prime_UTR.1	CmaCh01G015590.1.three_prime_UTR.1	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh01G015590.1.CDS.3	CmaCh01G015590.1.CDS.3	CDS
CmaCh01G015590.1.CDS.2	CmaCh01G015590.1.CDS.2	CDS
CmaCh01G015590.1.CDS.1	CmaCh01G015590.1.CDS.1	CDS

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh01G015590.1.exon.3	CmaCh01G015590.1.exon.3	exon
CmaCh01G015590.1.exon.2	CmaCh01G015590.1.exon.2	exon
CmaCh01G015590.1.exon.1	CmaCh01G015590.1.exon.1	exon

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009606	Protein of unknown function DUF1218	PFAM	PF06749	DUF1218	coord: 59..154 score: 7.4
None	No IPR available	unknown	Coil	Coil	coord: 168..189 scor
None	No IPR available	PANTHER	PTHR31769	FAMILY NOT NAMED	coord: 1..177 score: 4.0E
None	No IPR available	PANTHER	PTHR31769:SF9	SUBFAMILY NOT NAMED	coord: 1..177 score: 4.0E