CmaCh01G015590 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh01G015590
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Transmembrane protein, putative
Location	Cma_Chr01 : 10831275 .. 10833091 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTGTTTCTGTTAAATTGATGTCTCTTATTGTTGGAACTTTGGGTGTGATATCCTTTATATTTGGAATCGTTGCCGAAAACAAGAAGGTAAGCATCTGTAATCTTTGTAAACAAGCATACCGCCTTAGCAGTTATTCGCTTTTTAATATACATATCTATTCATTTAAAACTGTTGACCGCAAGATTCAATATTGATTTAATTAGTCTATGAGATCCGGAAACTTCTTCCTAGTAGACATTTTAAAAACCTTGAGAAGCTTGAAAGGGAAAGCCCAAAGAGGACAATATTACTAGCGGTGAGCTTGGGTCGTTACATAGTCCCTCGTCTATGTGTGGGAGCAGTTATATGAAATCTATGTTGGCTGTGGATATGGTAGTCAGTGGTTTAATGGTCACTAACTTGTTTTCCTATCTTTACTTGGATTTGAGCAGCCTGCATCTGGAACTCTCATCCCAGGCAAAGGCCTTGTTATCTGTAAATATCCTGGCGACCCGACGGTTGCCTTGGGATTTCTATCTTTTCTGTTTCTTCTTGCTTCTTCCATTGCGGGATACACCTCTCTGTTCTATCCTTACCAAGGAAAATCGGTTCCTCGAGGAGCGATGTTTAAGAACGGTAGTTTCTCTGTGTTCTTCAACGTTGCTCAGTAAGTTCTCTTTTGGAGGCACTTCCCTTTCTCTGACTGTTAACTAAATCATCTTAGCTTTGTATTCTTTATTAGAATGAATGATGTTACAAAATGATGCCCCCTAGTACATTATAGATCATGACAATTCTGCATCCTTCCATATAAACTACTTCTTCAGTTGGGTTTGTGTAGTTTATGTTGTAAGTTTTGGCTTCCACCCGTGGATGTAAGGAAATTTCTTTCATTCGAATCATGTAAATTTTTGTGTCTGTTTGTTTAATTTCTATTTGTGGGTGTATGAGTGCGATCAATCTTGCTTCCACTTCCACTTCCGCTACAACAATTGGATATCAGAGCATTTTTTTGTTGGTTACGAACCGTTTACGCATCACAAATCATTACCCTTTTCCGAAACATTTCTTGTAGAGGGGTCTATGCTTGTTATGATTTCATTCATGTAGCTTCTACAAGGCATTAAAGTGTAGCACATATTGAAGCACCCTCTCTATTTTGCAGATTCACAACTGGATTAGCTATTGCTTTGCTGGTATGGCCCACGGTCACAGAGCAACTTCACTTGATGCATAACATTCATCACAATGATGTGACAAAGTGCCCGACCGCTAAGACCGGTCTTCTAGGTGGCGGTGCATTTCTATCCCTGGATTCATGCCTCTTCTGGCTGGTTGCTCTGATGTTGGCTGGAAATGCACGAGAGGACTACTTTAATGAAATAGAAGAAAAAGAAAGCAATGCTCAAGCTCTCAAGAGCAGTGCATGAACCTCTTCTCTGTTTGGTGAGAATAATAAATTTTGTCTCTTTACTATGGGTTTTTAGTTGTTATTAGGCAGGGATTTATCCGTGAGTATGGTAATTCTTCTTTGGAATTTTACTGTTAAGCTGCAGGCTCTTAATCCATCCTAGTGGTGCACTTAGGTCAACCTTAGTTACAATTCTAGTGCTCAACTTTCTCAGCTTAGTTAGGCTTGGTCTCGGCATTTTTCCGTCTTTTTTCAACCGGATGAAGCGGATATTCGAACATTCGACTTTTAGATACATATATATAGTGTCTTAGGACATGTTTGATGGGTAGTTTGAATTCGATCTTGTATTTACAAATTCACTTAGATCGGTGAATATACTTTGTAGATGTGTTGTTTTAAATTATTTTTCGAATTTTGTGA

mRNA sequence

ATGGCTGTTTCTGTTAAATTGATGTCTCTTATTGTTGGAACTTTGGGTGTGATATCCTTTATATTTGGAATCGTTGCCGAAAACAAGAAGCCTGCATCTGGAACTCTCATCCCAGGCAAAGGCCTTGTTATCTGTAAATATCCTGGCGACCCGACGGTTGCCTTGGGATTTCTATCTTTTCTGTTTCTTCTTGCTTCTTCCATTGCGGGATACACCTCTCTGTTCTATCCTTACCAAGGAAAATCGGTTCCTCGAGGAGCGATGTTTAAGAACGGTAGTTTCTCTGTGTTCTTCAACGTTGCTCAATTCACAACTGGATTAGCTATTGCTTTGCTGGTATGGCCCACGGTCACAGAGCAACTTCACTTGATGCATAACATTCATCACAATGATGTGACAAAGTGCCCGACCGCTAAGACCGGTCTTCTAGGTGGCGGTGCATTTCTATCCCTGGATTCATGCCTCTTCTGGCTGGTTGCTCTGATGTTGGCTGGAAATGCACGAGAGGACTACTTTAATGAAATAGAAGAAAAAGAAAGCAATGCTCAAGCTCTCAAGAGCAGTGCATGAACCTCTTCTCTGTTTGGTGAGAATAATAAATTTTGTCTCTTTACTATGGGTTTTTAGTTGTTATTAGGCAGGGATTTATCCGTGAGTATGGTAATTCTTCTTTGGAATTTTACTGTTAAGCTGCAGGCTCTTAATCCATCCTAGTGGTGCACTTAGGTCAACCTTAGTTACAATTCTAGTGCTCAACTTTCTCAGCTTAGTTAGGCTTGGTCTCGGCATTTTTCCGTCTTTTTTCAACCGGATGAAGCGGATATTCGAACATTCGACTTTTAGATACATATATATAGTGTCTTAGGACATGTTTGATGGGTAGTTTGAATTCGATCTTGTATTTACAAATTCACTTAGATCGGTGAATATACTTTGTAGATGTGTTGTTTTAAATTATTTTTCGAATTTTGTGA

Coding sequence (CDS)

ATGGCTGTTTCTGTTAAATTGATGTCTCTTATTGTTGGAACTTTGGGTGTGATATCCTTTATATTTGGAATCGTTGCCGAAAACAAGAAGCCTGCATCTGGAACTCTCATCCCAGGCAAAGGCCTTGTTATCTGTAAATATCCTGGCGACCCGACGGTTGCCTTGGGATTTCTATCTTTTCTGTTTCTTCTTGCTTCTTCCATTGCGGGATACACCTCTCTGTTCTATCCTTACCAAGGAAAATCGGTTCCTCGAGGAGCGATGTTTAAGAACGGTAGTTTCTCTGTGTTCTTCAACGTTGCTCAATTCACAACTGGATTAGCTATTGCTTTGCTGGTATGGCCCACGGTCACAGAGCAACTTCACTTGATGCATAACATTCATCACAATGATGTGACAAAGTGCCCGACCGCTAAGACCGGTCTTCTAGGTGGCGGTGCATTTCTATCCCTGGATTCATGCCTCTTCTGGCTGGTTGCTCTGATGTTGGCTGGAAATGCACGAGAGGACTACTTTAATGAAATAGAAGAAAAAGAAAGCAATGCTCAAGCTCTCAAGAGCAGTGCATGA

Protein sequence

MAVSVKLMSLIVGTLGVISFIFGIVAENKKPASGTLIPGKGLVICKYPGDPTVALGFLSFLFLLASSIAGYTSLFYPYQGKSVPRGAMFKNGSFSVFFNVAQFTTGLAIALLVWPTVTEQLHLMHNIHHNDVTKCPTAKTGLLGGGAFLSLDSCLFWLVALMLAGNAREDYFNEIEEKESNAQALKSSA

Homology

[Close]

BLAST of CmaCh01G015590 vs. TrEMBL
Match: A0A0A0LHD9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G881600 PE=4 SV=1)

HSP 1 Score: 310.5 bits (794), Expect = 1.4e-81
Identity = 156/189 (82.54%), Postives = 168/189 (88.89%), Query Frame = 1


Query: 1   MAVSVKLMSLIVGTLGVISFIFGIVAENKKPASGTLIPGKGLVICKYPGDPTVALGFLSF 60
           MAVSVKLMSLIV  LGV SFIFG++AENKKPASGT IPGKG+VIC+YPGDPTV LG+LS 
Sbjct: 1   MAVSVKLMSLIVAALGVTSFIFGVIAENKKPASGTPIPGKGIVICQYPGDPTVVLGYLSV 60

Query: 61  LFLLASSIAGYTSLFYPYQGKSVPRGAMFKNGSFSVFFNVAQFTTGLAIALLVWPTVTEQ 120
            FLLASS AGY SLFYPYQGKSVPRGAMFK+ SFS FFN+A FTTGLAI LLVWPTVTEQ
Sbjct: 61  AFLLASSAAGYLSLFYPYQGKSVPRGAMFKSSSFSTFFNIALFTTGLAITLLVWPTVTEQ 120

Query: 121 LHLMHNIHHNDVTKCPTAKTGLLGGGAFLSLDSCLFWLVALMLAGNAREDYFNEIEEKES 180
           LHL  N+HHN  T CPTAKTGLLGGGAFLSLDS LFWLVALMLAGNAREDYF+EI EK S
Sbjct: 121 LHLTRNVHHNIETACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIAEKGS 180

Query: 181 NAQALKSSA 190
           N+++LKSSA
Sbjct: 181 NSESLKSSA 189

[Close]

BLAST of CmaCh01G015590 vs. TrEMBL
Match: A0A0A0LEF8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G881610 PE=4 SV=1)

HSP 1 Score: 298.9 bits (764), Expect = 4.4e-78
Identity = 152/190 (80.00%), Postives = 167/190 (87.89%), Query Frame = 1


Query: 1   MAVSVKLMSLIVGTLGVISFIFGIVAENKKPASGTLIPGKGLVICKYPGDPTVALGFLSF 60
           MAVSVKLMSL+VGTLGVISF+FG+VAENKKPASGT IPGKG V+CKY  DPTVALGFLSF
Sbjct: 1   MAVSVKLMSLLVGTLGVISFVFGVVAENKKPASGTPIPGKGHVVCKYQSDPTVALGFLSF 60

Query: 61  LFLLASSIAGYTSLFYPYQGKSVPRGAMFKNGSFSVFFNVAQFTTGLAIALLVWPTVTEQ 120
           +FLLASS AGY SLFYPY+GKSVPRGA FK+ +F  FFN+A FTTGLAI +LVWPTVTEQ
Sbjct: 61  MFLLASSCAGYLSLFYPYEGKSVPRGAFFKSSTFFAFFNIALFTTGLAITMLVWPTVTEQ 120

Query: 121 LHLMHNIHHNDVTKCPTAKTGLLGGGAFLSLDSCLFWLVALMLAGNAREDYFNEIEEK-E 180
           LHL  N+H N  T CPTAKTGLLGGGAFLSLDS LFWLVALMLAGNAREDYF+EI EK  
Sbjct: 121 LHLTRNVHFNLDTACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIAEKGT 180

Query: 181 SNAQALKSSA 190
           +N +A+KSSA
Sbjct: 181 TNVEAVKSSA 190

[Close]

BLAST of CmaCh01G015590 vs. TrEMBL
Match: A0A067KRQ1_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_11059 PE=4 SV=1)

HSP 1 Score: 270.0 bits (689), Expect = 2.2e-69
Identity = 128/177 (72.32%), Postives = 155/177 (87.57%), Query Frame = 1


Query: 1   MAVSVKLMSLIVGTLGVISFIFGIVAENKKPASGTLIPGKGLVICKYPGDPTVALGFLSF 60
           MAV+V+ MS+IV TLG +SFIFG++AENKKPA+GT I GKG+VICKYP DPTVALG+LSF
Sbjct: 1   MAVTVRQMSVIVATLGTLSFIFGVIAENKKPAAGTPITGKGVVICKYPSDPTVALGYLSF 60

Query: 61  LFLLASSIAGYTSLFYPYQGKSVPRGAMFKNGSFSVFFNVAQFTTGLAIALLVWPTVTEQ 120
            FL+ S++AG+ SLFYPY+GKS+P+ A+F++ SF VFFN+A FT GLA ALL+WPT+TEQ
Sbjct: 61  AFLVLSALAGFWSLFYPYKGKSIPQSALFQSTSFVVFFNIAVFTAGLAAALLLWPTITEQ 120

Query: 121 LHLMHNIHHNDVTKCPTAKTGLLGGGAFLSLDSCLFWLVALMLAGNAREDYFNEIEE 178
           LHLM  +HHN  T CPTAKTGLLGGGAF+SLDS LFWLVALMLA NAREDYF+E+E+
Sbjct: 121 LHLMRKVHHNMETDCPTAKTGLLGGGAFISLDSALFWLVALMLADNAREDYFDEVEK 177

[Close]

BLAST of CmaCh01G015590 vs. TrEMBL
Match: K4CI89_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1)

HSP 1 Score: 266.2 bits (679), Expect = 3.1e-68
Identity = 129/178 (72.47%), Postives = 150/178 (84.27%), Query Frame = 1


Query: 1   MAVSVKLMSLIVGTLGVISFIFGIVAENKKPASGTLIPGKGLVICKYPGDPTVALGFLSF 60
           MA+ +K MS+I+ TLGV+SFIFG++AENKKPA+GT I GKG+VICKY  DPTVALG+LSF
Sbjct: 1   MAIGMKQMSMIIATLGVLSFIFGVIAENKKPAAGTAISGKGVVICKYKSDPTVALGYLSF 60

Query: 61  LFLLASSIAGYTSLFYPYQGKSVPRGAMFKNGSFSVFFNVAQFTTGLAIALLVWPTVTEQ 120
           +FL ASS+AG+ SLFYPYQGKSVP+ A+ +N SF VF N+A  TTGLA  LL+WPT+TEQ
Sbjct: 61  VFLAASSVAGFLSLFYPYQGKSVPQAALLRNTSFLVFLNIALGTTGLAATLLLWPTITEQ 120

Query: 121 LHLMHNIHHNDVTKCPTAKTGLLGGGAFLSLDSCLFWLVALMLAGNAREDYFNEIEEK 179
           LH+  NIHHN  T CPTAKTGLLGGGAFLSLDS LFWLVALMLA NAREDYF E + K
Sbjct: 121 LHITRNIHHNLQTDCPTAKTGLLGGGAFLSLDSALFWLVALMLADNAREDYFQETDIK 178

[Close]

BLAST of CmaCh01G015590 vs. TrEMBL
Match: M1B6Y2_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400014853 PE=4 SV=1)

HSP 1 Score: 265.8 bits (678), Expect = 4.1e-68
Identity = 136/195 (69.74%), Postives = 158/195 (81.03%), Query Frame = 1


Query: 1   MAVSVKLMSLIVGTLGVISFIFGIVAENKKPASGTLIPGKGLVICKYPGDPTVALGFLSF 60
           MA+ +K MS+I+ TLGV+SFIFG++AENKKPA+GT I GKG+VICKY  DPTVALG+LSF
Sbjct: 1   MAIGMKQMSMIIATLGVLSFIFGVIAENKKPAAGTAISGKGVVICKYKSDPTVALGYLSF 60

Query: 61  LFLLASSIAGYTSLFYPYQGKSVPRGAMFKNGSFSVFFNVAQFTTGLAIALLVWPTVTEQ 120
           +FL ASS+AG+ SLFYPYQGKSVP+ A+ +N SF VF N+A  TTGLA  LL+WPT+TEQ
Sbjct: 61  VFLAASSVAGFLSLFYPYQGKSVPQAALLRNTSFVVFLNIALGTTGLAATLLLWPTITEQ 120

Query: 121 LHLMHNIHHNDVTKCPTAKTGLLGGGAFLSLDSCLFWLVALMLAGNAREDYFNEI----E 180
           LH+  NIHHN  T CPTAKTGLLGGGAFLSLDS LFWLVALMLA NAREDYF E     E
Sbjct: 121 LHITRNIHHNLQTDCPTAKTGLLGGGAFLSLDSALFWLVALMLADNAREDYFQETNVKGE 180

Query: 181 EKESNA--QALKSSA 190
            K S A  + +KSSA
Sbjct: 181 PKASYADDEIIKSSA 195

[Close]

BLAST of CmaCh01G015590 vs. TAIR10
Match: AT4G31130.1 (AT4G31130.1 Protein of unknown function (DUF1218))

HSP 1 Score: 263.1 bits (671), Expect = 1.3e-70
Identity = 126/178 (70.79%), Postives = 151/178 (84.83%), Query Frame = 1


Query: 1   MAVSVKLMSLIVGTLGVISFIFGIVAENKKPASGTLIPGKGLVICKYPGDPTVALGFLSF 60
           MAVS+K MSL+V  LGV+SF+ G++AENKKPASGT I GKG+VICKYP DPTVALG+LS 
Sbjct: 1   MAVSMKQMSLVVSALGVLSFVLGVIAENKKPASGTPISGKGVVICKYPSDPTVALGYLSA 60

Query: 61  LFLLASSIAGYTSLFYPYQGKSVPRGAMFKNGSFSVFFNVAQFTTGLAIALLVWPTVTEQ 120
            FLLA ++AGY SLF  Y+GKSVP   +FK+ SFSVFFN+A  T+GLA++LL+WPT+TEQ
Sbjct: 61  AFLLACTVAGYKSLFISYKGKSVPNSVLFKSTSFSVFFNIALITSGLALSLLLWPTITEQ 120

Query: 121 LHLMHNIHHNDVTKCPTAKTGLLGGGAFLSLDSCLFWLVALMLAGNAREDYFNEIEEK 179
           LHL  N+H N  T CPTAKTGLLGGGAF+SLDSCLFWLVALMLA NARED+F+E+E +
Sbjct: 121 LHLTRNVHRNLETSCPTAKTGLLGGGAFVSLDSCLFWLVALMLADNAREDHFDEVESR 178

[Close]

BLAST of CmaCh01G015590 vs. NCBI nr
Match: gi|449437098|ref|XP_004136329.1| (PREDICTED: uncharacterized protein LOC101222863 [Cucumis sativus])

HSP 1 Score: 310.5 bits (794), Expect = 2.1e-81
Identity = 156/189 (82.54%), Postives = 168/189 (88.89%), Query Frame = 1


Query: 1   MAVSVKLMSLIVGTLGVISFIFGIVAENKKPASGTLIPGKGLVICKYPGDPTVALGFLSF 60
           MAVSVKLMSLIV  LGV SFIFG++AENKKPASGT IPGKG+VIC+YPGDPTV LG+LS 
Sbjct: 1   MAVSVKLMSLIVAALGVTSFIFGVIAENKKPASGTPIPGKGIVICQYPGDPTVVLGYLSV 60

Query: 61  LFLLASSIAGYTSLFYPYQGKSVPRGAMFKNGSFSVFFNVAQFTTGLAIALLVWPTVTEQ 120
            FLLASS AGY SLFYPYQGKSVPRGAMFK+ SFS FFN+A FTTGLAI LLVWPTVTEQ
Sbjct: 61  AFLLASSAAGYLSLFYPYQGKSVPRGAMFKSSSFSTFFNIALFTTGLAITLLVWPTVTEQ 120

Query: 121 LHLMHNIHHNDVTKCPTAKTGLLGGGAFLSLDSCLFWLVALMLAGNAREDYFNEIEEKES 180
           LHL  N+HHN  T CPTAKTGLLGGGAFLSLDS LFWLVALMLAGNAREDYF+EI EK S
Sbjct: 121 LHLTRNVHHNIETACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIAEKGS 180

Query: 181 NAQALKSSA 190
           N+++LKSSA
Sbjct: 181 NSESLKSSA 189

[Close]

BLAST of CmaCh01G015590 vs. NCBI nr
Match: gi|659132707|ref|XP_008466341.1| (PREDICTED: uncharacterized protein LOC103503778 [Cucumis melo])

HSP 1 Score: 309.7 bits (792), Expect = 3.5e-81
Identity = 154/189 (81.48%), Postives = 168/189 (88.89%), Query Frame = 1


Query: 1   MAVSVKLMSLIVGTLGVISFIFGIVAENKKPASGTLIPGKGLVICKYPGDPTVALGFLSF 60
           MAVSVKLMSL V  LGV SFIFG++AENKKPASGT IPGKG+VIC+YPGDPTV LG+LS 
Sbjct: 1   MAVSVKLMSLTVAALGVTSFIFGVIAENKKPASGTPIPGKGIVICQYPGDPTVVLGYLSV 60

Query: 61  LFLLASSIAGYTSLFYPYQGKSVPRGAMFKNGSFSVFFNVAQFTTGLAIALLVWPTVTEQ 120
            FLLASS+AGY SLFYPYQGKSVPRGAMFK+ SFS FFN+A FTTGLAI LLVWPTVTEQ
Sbjct: 61  AFLLASSVAGYLSLFYPYQGKSVPRGAMFKSSSFSAFFNIALFTTGLAITLLVWPTVTEQ 120

Query: 121 LHLMHNIHHNDVTKCPTAKTGLLGGGAFLSLDSCLFWLVALMLAGNAREDYFNEIEEKES 180
           LHL  N+HHN  T CPTAKTGLLGGGAFLSLDS LFWLVALMLAGNAREDYF+EI EK +
Sbjct: 121 LHLSRNVHHNTETACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIAEKGT 180

Query: 181 NAQALKSSA 190
           N+++LKSSA
Sbjct: 181 NSESLKSSA 189

[Close]

BLAST of CmaCh01G015590 vs. NCBI nr
Match: gi|659132705|ref|XP_008466340.1| (PREDICTED: uncharacterized protein LOC103503777 [Cucumis melo])

HSP 1 Score: 308.1 bits (788), Expect = 1.0e-80
Identity = 155/189 (82.01%), Postives = 168/189 (88.89%), Query Frame = 1


Query: 1   MAVSVKLMSLIVGTLGVISFIFGIVAENKKPASGTLIPGKGLVICKYPGDPTVALGFLSF 60
           MAVSVKLMSL+VGTLGVISF+FG+VAENKKPASGT IPGKGLV+CKY  DPTVALGFLSF
Sbjct: 1   MAVSVKLMSLLVGTLGVISFVFGVVAENKKPASGTPIPGKGLVVCKYQSDPTVALGFLSF 60

Query: 61  LFLLASSIAGYTSLFYPYQGKSVPRGAMFKNGSFSVFFNVAQFTTGLAIALLVWPTVTEQ 120
           LFLLASS AGY SLFYPY+GKSVPRGA FK+ SFS FFN+A FTTGLAI +LVWPTVTEQ
Sbjct: 61  LFLLASSFAGYLSLFYPYEGKSVPRGAFFKSSSFSAFFNIALFTTGLAITMLVWPTVTEQ 120

Query: 121 LHLMHNIHHNDVTKCPTAKTGLLGGGAFLSLDSCLFWLVALMLAGNAREDYFNEIEEKES 180
           LHL  N+H N  T CPTAKTGLLGGGAFLSLDS L WLVALMLAGNAREDYF+EI EK +
Sbjct: 121 LHLTRNVHFNLNTACPTAKTGLLGGGAFLSLDSSLLWLVALMLAGNAREDYFDEIAEKGT 180

Query: 181 NAQALKSSA 190
           N +A+KSSA
Sbjct: 181 NVEAVKSSA 189

[Close]

BLAST of CmaCh01G015590 vs. NCBI nr
Match: gi|449437094|ref|XP_004136327.1| (PREDICTED: uncharacterized protein LOC101222453 [Cucumis sativus])

HSP 1 Score: 298.9 bits (764), Expect = 6.3e-78
Identity = 152/190 (80.00%), Postives = 167/190 (87.89%), Query Frame = 1


Query: 1   MAVSVKLMSLIVGTLGVISFIFGIVAENKKPASGTLIPGKGLVICKYPGDPTVALGFLSF 60
           MAVSVKLMSL+VGTLGVISF+FG+VAENKKPASGT IPGKG V+CKY  DPTVALGFLSF
Sbjct: 1   MAVSVKLMSLLVGTLGVISFVFGVVAENKKPASGTPIPGKGHVVCKYQSDPTVALGFLSF 60

Query: 61  LFLLASSIAGYTSLFYPYQGKSVPRGAMFKNGSFSVFFNVAQFTTGLAIALLVWPTVTEQ 120
           +FLLASS AGY SLFYPY+GKSVPRGA FK+ +F  FFN+A FTTGLAI +LVWPTVTEQ
Sbjct: 61  MFLLASSCAGYLSLFYPYEGKSVPRGAFFKSSTFFAFFNIALFTTGLAITMLVWPTVTEQ 120

Query: 121 LHLMHNIHHNDVTKCPTAKTGLLGGGAFLSLDSCLFWLVALMLAGNAREDYFNEIEEK-E 180
           LHL  N+H N  T CPTAKTGLLGGGAFLSLDS LFWLVALMLAGNAREDYF+EI EK  
Sbjct: 121 LHLTRNVHFNLDTACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIAEKGT 180

Query: 181 SNAQALKSSA 190
           +N +A+KSSA
Sbjct: 181 TNVEAVKSSA 190

[Close]

BLAST of CmaCh01G015590 vs. NCBI nr
Match: gi|1009136025|ref|XP_015885310.1| (PREDICTED: uncharacterized protein LOC107420778 [Ziziphus jujuba])

HSP 1 Score: 271.9 bits (694), Expect = 8.2e-70
Identity = 131/176 (74.43%), Postives = 154/176 (87.50%), Query Frame = 1


Query: 1   MAVSVKLMSLIVGTLGVISFIFGIVAENKKPASGTLIPGKGLVICKYPGDPTVALGFLSF 60
           MAV+VK MSLIV   GV+SFIFG+VAENKKPASGT I GK +VICKYP DPTV LG+LSF
Sbjct: 1   MAVTVKQMSLIVAFFGVLSFIFGVVAENKKPASGTPITGKDVVICKYPSDPTVVLGYLSF 60

Query: 61  LFLLASSIAGYTSLFYPYQGKSVPRGAMFKNGSFSVFFNVAQFTTGLAIALLVWPTVTEQ 120
            FL+ASS+AG+ SLFYPY+GKS+P+GA+F++ SF VFFN++ FT GLA ALL+WPT+TEQ
Sbjct: 61  AFLIASSLAGFLSLFYPYKGKSLPQGALFRSSSFIVFFNISLFTAGLAAALLLWPTITEQ 120

Query: 121 LHLMHNIHHNDVTKCPTAKTGLLGGGAFLSLDSCLFWLVALMLAGNAREDYFNEIE 177
           LHL +N+HHN  T+CPTAKTGLLGGGAF+SLDS LFWLVALMLA NAREDYF E+E
Sbjct: 121 LHLKNNVHHNLKTECPTAKTGLLGGGAFVSLDSALFWLVALMLADNAREDYFEEVE 176

The following BLAST results are available for this feature:

BLAST of CmaCh01G015590 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmaCh01G015590 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LHD9_CUCSA	1.4e-81	82.54	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G881600 PE=4 SV=1	[more]
A0A0A0LEF8_CUCSA	4.4e-78	80.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G881610 PE=4 SV=1	[more]
A0A067KRQ1_JATCU	2.2e-69	72.32	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_11059 PE=4 SV=1	[more]
K4CI89_SOLLC	3.1e-68	72.47	Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1	[more]
M1B6Y2_SOLTU	4.1e-68	69.74	Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400014853 PE=4 SV=1	[more]

BLAST of CmaCh01G015590 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G31130.1	1.3e-70	70.79	Protein of unknown function (DUF1218)	[more]

BLAST of CmaCh01G015590 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449437098\|ref\|XP_004136329.1\|	2.1e-81	82.54	PREDICTED: uncharacterized protein LOC101222863 [Cucumis sativus]	[more]
gi\|659132707\|ref\|XP_008466341.1\|	3.5e-81	81.48	PREDICTED: uncharacterized protein LOC103503778 [Cucumis melo]	[more]
gi\|659132705\|ref\|XP_008466340.1\|	1.0e-80	82.01	PREDICTED: uncharacterized protein LOC103503777 [Cucumis melo]	[more]
gi\|449437094\|ref\|XP_004136327.1\|	6.3e-78	80.00	PREDICTED: uncharacterized protein LOC101222453 [Cucumis sativus]	[more]
gi\|1009136025\|ref\|XP_015885310.1\|	8.2e-70	74.43	PREDICTED: uncharacterized protein LOC107420778 [Ziziphus jujuba]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR009606	DUF1218

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005886	plasma membrane
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh01G015590.1	CmaCh01G015590.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009606	Protein of unknown function DUF1218	PFAM	PF06749	DUF1218	coord: 59..154 score: 7.4
None	No IPR available	unknown	Coil	Coil	coord: 168..189 scor
None	No IPR available	PANTHER	PTHR31769	FAMILY NOT NAMED	coord: 1..177 score: 4.0E
None	No IPR available	PANTHER	PTHR31769:SF9	SUBFAMILY NOT NAMED	coord: 1..177 score: 4.0E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh01G015590	Cucsa.310800	Cucumber (Gy14) v1	cgycmaB0863
CmaCh01G015590	Cla020927	Watermelon (97103) v1	cmawmB446
CmaCh01G015590	Csa3G881600	Cucumber (Chinese Long) v2	cmacuB460
CmaCh01G015590	MELO3C003648	Melon (DHL92) v3.5.1	cmameB421
CmaCh01G015590	ClCG05G017370	Watermelon (Charleston Gray)	cmawcgB417
CmaCh01G015590	CSPI03G44440	Wild cucumber (PI 183967)	cmacpiB463
CmaCh01G015590	CmoCh01G016060	Cucurbita moschata (Rifu)	cmacmoB468
CmaCh01G015590	CmoCh09G005000	Cucurbita moschata (Rifu)	cmacmoB443
CmaCh01G015590	Lsi04G021740	Bottle gourd (USVL1VR-Ls)	cmalsiB438
CmaCh01G015590	MELO3C003648.2	Melon (DHL92) v3.6.1	cmamedB484
CmaCh01G015590	CsaV3_3G046870	Cucumber (Chinese Long) v3	cmacucB0551
CmaCh01G015590	Cla97C05G098560	Watermelon (97103) v2	cmawmbB486
CmaCh01G015590	Bhi09G001980	Wax gourd	cmawgoB0624
CmaCh01G015590	CsGy3G041880	Cucumber (Gy14) v2	cgybcmaB372

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmaCh01G015590	CmaCh09G005010	Cucurbita maxima (Rimu)	cmacmaB059

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh01G015590	Silver-seed gourd	carcmaB0081
CmaCh01G015590	Silver-seed gourd	carcmaB0771
CmaCh01G015590	Silver-seed gourd	carcmaB0894
CmaCh01G015590	Cucumber (Chinese Long) v3	cmacucB0533
CmaCh01G015590	Cucumber (Chinese Long) v3	cmacucB0537
CmaCh01G015590	Watermelon (97103) v2	cmawmbB475
CmaCh01G015590	Watermelon (97103) v2	cmawmbB505
CmaCh01G015590	Wax gourd	cmawgoB0569
CmaCh01G015590	Wax gourd	cmawgoB0601
CmaCh01G015590	Cucurbita maxima (Rimu)	cmacmaB044
CmaCh01G015590	Cucurbita maxima (Rimu)	cmacmaB429
CmaCh01G015590	Cucumber (Gy14) v1	cgycmaB0456
CmaCh01G015590	Cucurbita moschata (Rifu)	cmacmoB431
CmaCh01G015590	Cucurbita moschata (Rifu)	cmacmoB486
CmaCh01G015590	Wild cucumber (PI 183967)	cmacpiB445
CmaCh01G015590	Wild cucumber (PI 183967)	cmacpiB448
CmaCh01G015590	Cucumber (Chinese Long) v2	cmacuB442
CmaCh01G015590	Cucumber (Chinese Long) v2	cmacuB445
CmaCh01G015590	Melon (DHL92) v3.5.1	cmameB409
CmaCh01G015590	Melon (DHL92) v3.5.1	cmameB425
CmaCh01G015590	Watermelon (Charleston Gray)	cmawcgB409
CmaCh01G015590	Watermelon (Charleston Gray)	cmawcgB436
CmaCh01G015590	Watermelon (97103) v1	cmawmB424
CmaCh01G015590	Watermelon (97103) v1	cmawmB436
CmaCh01G015590	Cucurbita pepo (Zucchini)	cmacpeB490
CmaCh01G015590	Cucurbita pepo (Zucchini)	cmacpeB464
CmaCh01G015590	Cucurbita pepo (Zucchini)	cmacpeB502
CmaCh01G015590	Bottle gourd (USVL1VR-Ls)	cmalsiB425
CmaCh01G015590	Bottle gourd (USVL1VR-Ls)	cmalsiB457
CmaCh01G015590	Cucumber (Gy14) v2	cgybcmaB206
CmaCh01G015590	Cucumber (Gy14) v2	cgybcmaB359
CmaCh01G015590	Melon (DHL92) v3.6.1	cmamedB471
CmaCh01G015590	Melon (DHL92) v3.6.1	cmamedB488