CmaCh01G005700.1 (mRNA) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh01G005700.1
Type	mRNA
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	MYB-like DNA-binding domain protein
Location	Cma_Chr01 : 2960173 .. 2961494 (+)
Sequence length	1104

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TATATAAATCTCCTACCAACACAATCATCAACAACAAGAACATCAAGAACAAGAGAGAGAAAAACAAGAACAAGATGGTGCAAGAGGAAAGTATCAGAAAAGGGCCATGGACAGAGCAGGAGGACTTCCAATTGGTCTGCTTTGTTGGTTTGTTCGGAGATCGCCGGTGGGATTTCATCGCCAAAGTATCAGGTTTGAAGGTGGCGGGAGAGTACAAATTATAGGTAGGGTTTATTAAAACCCCCCTCTTCTCCTCCTCCTCCTCCACCTCCTCCTCCACCTCCTTTTAACCTACCCCTTTCTCCTCTCTTACAGGCCTGAAAAGAAACGGTAAAAGCTGCCGTCTCCGGTGGGTTAACTACCTCCACCCCGGTCTCAAGCGCGGTAAGATGTCTCCCCAAGAAGAGCGCCTTGTCCTTGACCTCCACTCCAAGTGGGGCAACAGGTGAATACGAGAATTCATGCTCAAAGTGGATAATATCATACAATTGTGGAGAGTCGTCATTCCTAATACCGATTCTGACGTTTTTATTATTTTAGATGGTCTAAGATTGCCCGAAAGCTCCCAGGACGAACGGATAACGAAATAAAGAATTTTTGGCGAACCCATGTGAGAAAATTGGCTCAAGAGAAAAAGAAAGCCGCGGTTCATCATGTTGTGGTGTCGCCGTCGTCCTCATCGACGGTTGACTCGGTCCCGACGATTGATATCGGAGAAGAGAGCTTCTACGACACTGGTGGGGATTGGTCATGTTATATGGGTGAAGAGGATGAAAAGGGTTACTCTTATTCGATGGATGATATTTGGAGAGATATTGATGATCAGAGTGTTGTAAAGGCGGTTTGTGATGAGAAGTTGAGCTGTGGTCCAGTGGCATCACCGGCGCCGTGGGAGTACGGGGAGTACTCGCCGCCGTGGAAGGTGGCGGAGGAAAACTTTAGGATTTAATTCATTTAAATTTGTTAATAGAAGATGTGTTTTTGTTTTAGAGGGTAAGGGGGAAAGCTCTGACCTGTATAGCATTTGGAGTTTTCTTTACACTTTCTTGCACCATCTCATGCATCTTCATGCCCACTTTCTAAGCTACTTTTCTAAGCTTTTGTGTGATATCTTTCCAAATTTTAGATGAAACACAAAATTGGCTCTACTACTCCTCTCTCTCTATCACAAGAATCTACTTTGGGTTAGGTCGGCGGAGTTGCTAGTCCAACTTCAGAAGAAAAAACTCAAAATTAATGAGAGTTTATGAACTTTACTCCTTTACCGGTGTTCTCACTGAGACACCGCCTAGTGTCCACTCAGCTTAATATCTTCACTGTCA

mRNA sequence

TATATAAATCTCCTACCAACACAATCATCAACAACAAGAACATCAAGAACAAGAGAGAGAAAAACAAGAACAAGATGGTGCAAGAGGAAAGTATCAGAAAAGGGCCATGGACAGAGCAGGAGGACTTCCAATTGGTCTGCTTTGTTGGTTTGTTCGGAGATCGCCGGTGGGATTTCATCGCCAAAGTATCAGGCCTGAAAAGAAACGGTAAAAGCTGCCGTCTCCGGTGGGTTAACTACCTCCACCCCGGTCTCAAGCGCGGTAAGATGTCTCCCCAAGAAGAGCGCCTTGTCCTTGACCTCCACTCCAAGTGGGGCAACAGATGGTCTAAGATTGCCCGAAAGCTCCCAGGACGAACGGATAACGAAATAAAGAATTTTTGGCGAACCCATGTGAGAAAATTGGCTCAAGAGAAAAAGAAAGCCGCGGTTCATCATGTTGTGGTGTCGCCGTCGTCCTCATCGACGGTTGACTCGGTCCCGACGATTGATATCGGAGAAGAGAGCTTCTACGACACTGGTGGGGATTGGTCATGTTATATGGGTGAAGAGGATGAAAAGGGTTACTCTTATTCGATGGATGATATTTGGAGAGATATTGATGATCAGAGTGTTGTAAAGGCGGTTTGTGATGAGAAGTTGAGCTGTGGTCCAGTGGCATCACCGGCGCCGTGGGAGTACGGGGAGTACTCGCCGCCGTGGAAGGTGGCGGAGGAAAACTTTAGGATTTAATTCATTTAAATTTGTTAATAGAAGATGTGTTTTTGTTTTAGAGGGTAAGGGGGAAAGCTCTGACCTGTATAGCATTTGGAGTTTTCTTTACACTTTCTTGCACCATCTCATGCATCTTCATGCCCACTTTCTAAGCTACTTTTCTAAGCTTTTGTGTGATATCTTTCCAAATTTTAGATGAAACACAAAATTGGCTCTACTACTCCTCTCTCTCTATCACAAGAATCTACTTTGGGTTAGGTCGGCGGAGTTGCTAGTCCAACTTCAGAAGAAAAAACTCAAAATTAATGAGAGTTTATGAACTTTACTCCTTTACCGGTGTTCTCACTGAGACACCGCCTAGTGTCCACTCAGCTTAATATCTTCACTGTCA

Coding sequence (CDS)

ATGGTGCAAGAGGAAAGTATCAGAAAAGGGCCATGGACAGAGCAGGAGGACTTCCAATTGGTCTGCTTTGTTGGTTTGTTCGGAGATCGCCGGTGGGATTTCATCGCCAAAGTATCAGGCCTGAAAAGAAACGGTAAAAGCTGCCGTCTCCGGTGGGTTAACTACCTCCACCCCGGTCTCAAGCGCGGTAAGATGTCTCCCCAAGAAGAGCGCCTTGTCCTTGACCTCCACTCCAAGTGGGGCAACAGATGGTCTAAGATTGCCCGAAAGCTCCCAGGACGAACGGATAACGAAATAAAGAATTTTTGGCGAACCCATGTGAGAAAATTGGCTCAAGAGAAAAAGAAAGCCGCGGTTCATCATGTTGTGGTGTCGCCGTCGTCCTCATCGACGGTTGACTCGGTCCCGACGATTGATATCGGAGAAGAGAGCTTCTACGACACTGGTGGGGATTGGTCATGTTATATGGGTGAAGAGGATGAAAAGGGTTACTCTTATTCGATGGATGATATTTGGAGAGATATTGATGATCAGAGTGTTGTAAAGGCGGTTTGTGATGAGAAGTTGAGCTGTGGTCCAGTGGCATCACCGGCGCCGTGGGAGTACGGGGAGTACTCGCCGCCGTGGAAGGTGGCGGAGGAAAACTTTAGGATTTAA

Protein sequence

MVQEESIRKGPWTEQEDFQLVCFVGLFGDRRWDFIAKVSGLKRNGKSCRLRWVNYLHPGLKRGKMSPQEERLVLDLHSKWGNRWSKIARKLPGRTDNEIKNFWRTHVRKLAQEKKKAAVHHVVVSPSSSSTVDSVPTIDIGEESFYDTGGDWSCYMGEEDEKGYSYSMDDIWRDIDDQSVVKAVCDEKLSCGPVASPAPWEYGEYSPPWKVAEENFRI

Homology

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BLAST of CmaCh01G005700.1 vs. Swiss-Prot
Match: MYB48_ARATH (Transcription factor MYB48 OS=Arabidopsis thaliana GN=MYB48 PE=2 SV=1)

HSP 1 Score: 250.0 bits (637), Expect = 2.4e-65
Identity = 139/220 (63.18%), Postives = 157/220 (71.36%), Query Frame = 1


Query: 1   MVQEESIRKGPWTEQEDFQLVCFVGLFGDRRWDFIAKVSGLKRNGKSCRLRWVNYLHPGL 60
           M+QEE  RKGPWTEQED  LV FV LFGDRRWDFIAKVSGL R GKSCRLRWVNYLHPGL
Sbjct: 1   MMQEEGNRKGPWTEQEDILLVNFVHLFGDRRWDFIAKVSGLNRTGKSCRLRWVNYLHPGL 60

Query: 61  KRGKMSPQEERLVLDLHSKWGNRWSKIARKLPGRTDNEIKNFWRTHVRKLAQEKKKAAVH 120
           KRGKM+PQEERLVL+LH+KWGNRWSKIARKLPGRTDNEIKN+WRTH+RK AQEKK+    
Sbjct: 61  KRGKMTPQEERLVLELHAKWGNRWSKIARKLPGRTDNEIKNYWRTHMRKKAQEKKRPVSP 120

Query: 121 HVVVSPSSSSTVDSVPT----------IDIGEESFYDTGGDWSC-YMGEEDEKGYSYSMD 180
               S  SSS+V +  T             GE SFYDTGG  S   M +E+E    YS+D
Sbjct: 121 TSSFSNCSSSSVTTTTTNTQDTSCHSRKSSGEVSFYDTGGSRSTREMNQENED--VYSLD 180

Query: 181 DIWRDIDDQSV-----VKAVCDEK---LSCGPVASPAPWE 202
           DIWR+ID  +V     VK +  E+   LS   +ASP+ WE
Sbjct: 181 DIWREIDHSAVNIIKPVKDIYSEQSHCLSYPNLASPS-WE 217

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BLAST of CmaCh01G005700.1 vs. Swiss-Prot
Match: MYB59_ARATH (Transcription factor MYB59 OS=Arabidopsis thaliana GN=MYB59 PE=2 SV=2)

HSP 1 Score: 242.7 bits (618), Expect = 3.8e-63
Identity = 134/210 (63.81%), Postives = 156/210 (74.29%), Query Frame = 1


Query: 1   MVQEESIRKGPWTEQEDFQLVCFVGLFGDRRWDFIAKVSGLKRNGKSCRLRWVNYLHPGL 60
           +VQEE  RKGPWTEQED  LV FV LFGDRRWDF+AKVSGL R GKSCRLRWVNYLHPGL
Sbjct: 3   LVQEE-YRKGPWTEQEDILLVNFVHLFGDRRWDFVAKVSGLNRTGKSCRLRWVNYLHPGL 62

Query: 61  KRGKMSPQEERLVLDLHSKWGNRWSKIARKLPGRTDNEIKNFWRTHVRKLAQEKKKAAVH 120
           KRGKM+PQEERLVL+LH+KWGNRWSKIARKLPGRTDNEIKN+WRTH+RK AQEKK+    
Sbjct: 63  KRGKMTPQEERLVLELHAKWGNRWSKIARKLPGRTDNEIKNYWRTHMRKKAQEKKRP--- 122

Query: 121 HVVVSPSSSSTVDSVPTIDIGEESFYDTGGDWSCYMGEEDEKGYSYSMDDIWRDIDDQ-- 180
              +SP+SSS+  +  +  +   +  DTGG  +  M +E E GY YSMDDIWR+ID    
Sbjct: 123 ---MSPTSSSS--NCCSSSMTTTTSQDTGGS-NGKMNQECEDGY-YSMDDIWREIDQSGA 182

Query: 181 SVVKAVCDE-------KLSCGPVASPAPWE 202
           +V+K V D         L+  P+ASP  WE
Sbjct: 183 NVIKPVKDNYYSEQSCYLNFPPLASPT-WE 200

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BLAST of CmaCh01G005700.1 vs. Swiss-Prot
Match: MYBA2_ORYSJ (Myb-related protein MYBAS2 OS=Oryza sativa subsp. japonica GN=MYBAS2 PE=2 SV=1)

HSP 1 Score: 223.8 bits (569), Expect = 1.8e-57
Identity = 116/214 (54.21%), Postives = 142/214 (66.36%), Query Frame = 1


Query: 5   ESIRKGPWTEQEDFQLVCFVGLFGDRRWDFIAKVSGLKRNGKSCRLRWVNYLHPGLKRGK 64
           E IRKGPWTEQED QLVC V LFG+RRWDFIAKVSGL R GKSCRLRWVNYLHPGLKRG+
Sbjct: 6   EEIRKGPWTEQEDLQLVCTVRLFGERRWDFIAKVSGLNRTGKSCRLRWVNYLHPGLKRGR 65

Query: 65  MSPQEERLVLDLHSKWGNRWSKIARKLPGRTDNEIKNFWRTHVRKLAQEKKKAAVHHVVV 124
           MSP EERL+L+LH++WGNRWS+IAR+LPGRTDNEIKN+WRTH+RK AQE+K        +
Sbjct: 66  MSPHEERLILELHARWGNRWSRIARRLPGRTDNEIKNYWRTHMRKKAQERKSN------M 125

Query: 125 SPSSSSTV-------DSVPTIDIG--EESFYDTGGDWSCYMGEEDEKGYSYSMDDIWRDI 184
           SPSSSS+           P++ IG  E+  +   G  +  M         Y MD IW +I
Sbjct: 126 SPSSSSSSLTYQSCHPETPSMIIGIEEQELHGGSGCITSIMKSTPVDMDGYPMDQIWMEI 185

Query: 185 DDQSVVKAVCDEKLS-------CGPVASPAPWEY 203
           +  +V+   C ++          GP+     W+Y
Sbjct: 186 EAPNVLPGPCFDEAKDSASNSLSGPLLPYPMWDY 213

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BLAST of CmaCh01G005700.1 vs. Swiss-Prot
Match: MYBA1_ORYSJ (Myb-related protein MYBAS1 OS=Oryza sativa subsp. japonica GN=MYBAS1 PE=2 SV=1)

HSP 1 Score: 218.8 bits (556), Expect = 5.9e-56
Identity = 115/229 (50.22%), Postives = 146/229 (63.76%), Query Frame = 1


Query: 5   ESIRKGPWTEQEDFQLVCFVGLFGDRRWDFIAKVSGLKRNGKSCRLRWVNYLHPGLKRGK 64
           E +RKGPWTEQED QLVC V LFGDRRWDF+AKVSGL R GKSCRLRWVNYLHPGLK G+
Sbjct: 6   EEMRKGPWTEQEDLQLVCTVRLFGDRRWDFVAKVSGLNRTGKSCRLRWVNYLHPGLKHGR 65

Query: 65  MSPQEERLVLDLHSKWGNRWSKIARKLPGRTDNEIKNFWRTHVRKLAQEKKKAAVHHVVV 124
           MSP+EE L+++LH++WGNRWS+IAR+LPGRTDNEIKN+WRTH+RK AQE++        +
Sbjct: 66  MSPKEEHLIIELHARWGNRWSRIARRLPGRTDNEIKNYWRTHMRKKAQERRGD------M 125

Query: 125 SPSSSST--------VDSVPTIDIGEESFYDTGGDWSCYMGEEDEKGYSYSMDDIWRDID 184
           SPSSSS+        +D+VP I +     +D     +  +         Y+MD IW++I+
Sbjct: 126 SPSSSSSSLVYQSCLLDTVPIISMDGGDIHDDRSCMARVLKSTQSVMDGYTMDQIWKEIE 185

Query: 185 DQSVVKAV-CDEKLSCGPVASPAPW---EYGEYSPP---WKVAEENFRI 219
                  +  DE         P P       +YS P   WK+  E  R+
Sbjct: 186 APGAPSLLGIDEGKDKACSNLPCPLLTSTMSDYSCPEVFWKIDNEETRM 228

[Close]

BLAST of CmaCh01G005700.1 vs. Swiss-Prot
Match: MY108_ARATH (Transcription factor MYB108 OS=Arabidopsis thaliana GN=MYB108 PE=1 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 1.1e-36
Identity = 63/115 (54.78%), Postives = 93/115 (80.87%), Query Frame = 1


Query: 1   MVQEESIRKGPWTEQEDFQLVCFVGLFGDRRWDFIAKVSGLKRNGKSCRLRWVNYLHPGL 60
           M  E  +++GPWT +EDF+L+ ++   G+ RW+ +++ +GL+R GKSCRLRW+NYL P +
Sbjct: 13  MEDEMDLKRGPWTAEEDFKLMNYIATNGEGRWNSLSRCAGLQRTGKSCRLRWLNYLRPDV 72

Query: 61  KRGKMSPQEERLVLDLHSKWGNRWSKIARKLPGRTDNEIKNFWRTHVRKLAQEKK 116
           +RG ++ +E+ L+L+LHS+WGNRWSKIA+ LPGRTDNEIKN+WRT V+K A++ K
Sbjct: 73  RRGNITLEEQLLILELHSRWGNRWSKIAQYLPGRTDNEIKNYWRTRVQKHAKQLK 127

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BLAST of CmaCh01G005700.1 vs. TrEMBL
Match: M5W156_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa015954mg PE=4 SV=1)

HSP 1 Score: 273.9 bits (699), Expect = 1.7e-70
Identity = 150/244 (61.48%), Postives = 172/244 (70.49%), Query Frame = 1


Query: 1   MVQEESIRKGPWTEQEDFQLVCFVGLFGDRRWDFIAKVSGLKRNGKSCRLRWVNYLHPGL 60
           MVQEE+IRKGPWTEQEDF LVCFVGLFGDRRWDFIAKVSGL R GKSCRLRWVNYLHPGL
Sbjct: 1   MVQEENIRKGPWTEQEDFNLVCFVGLFGDRRWDFIAKVSGLNRTGKSCRLRWVNYLHPGL 60

Query: 61  KRGKMSPQEERLVLDLHSKWGNRWSKIARKLPGRTDNEIKNFWRTHVRKLAQEKKKAAVH 120
           KRGKM+PQEERLVL+LHSKWGNRWS+IARKLPGRTDNEIKN+WRTH+RK AQEKK+AA  
Sbjct: 61  KRGKMTPQEERLVLELHSKWGNRWSRIARKLPGRTDNEIKNYWRTHMRKKAQEKKRAA-- 120

Query: 121 HVVVSPSSSS---TVDSVPTIDIGEESFYDTGG-----------DWSCYMGEEDEK---G 180
               SPSSSS   +  S  T   G  SFYDTGG               +  +ED+K    
Sbjct: 121 ----SPSSSSSNCSSSSNITSTEGGASFYDTGGLEIKASSGAKKTGGDHQEQEDDKKRDQ 180

Query: 181 YSYSMDDIWRDID------DQSVVKAVCDEK---LSCGPVASPAPWEYGEYSPPWKVAEE 219
             YS+DDIW+DI+       + V     +E    +SC  +ASPAPWEY   S  W++ EE
Sbjct: 181 KEYSLDDIWKDINLPEVNSIEPVYNGYSEEACNIISCPLMASPAPWEYCSDS-LWEMDEE 237

[Close]

BLAST of CmaCh01G005700.1 vs. TrEMBL
Match: A0A061GXJ9_THECC (Myb domain protein 59 isoform 2 OS=Theobroma cacao GN=TCM_041904 PE=4 SV=1)

HSP 1 Score: 272.3 bits (695), Expect = 5.0e-70
Identity = 151/236 (63.98%), Postives = 176/236 (74.58%), Query Frame = 1


Query: 1   MVQEESIRKGPWTEQEDFQLVCFVGLFGDRRWDFIAKVSGLKRNGKSCRLRWVNYLHPGL 60
           MVQEE IRKGPWTEQED  LV FV LFGDRRWDFIAKVSGL R GKSCRLRWVNYLHPGL
Sbjct: 3   MVQEE-IRKGPWTEQEDILLVNFVHLFGDRRWDFIAKVSGLNRTGKSCRLRWVNYLHPGL 62

Query: 61  KRGKMSPQEERLVLDLHSKWGNRWSKIARKLPGRTDNEIKNFWRTHVRKLAQEKKKAAVH 120
           KRGKM+PQEERLVL+LH+KWGNRWS+IARKLPGRTDNEIKN+WRTH+RK AQEKK+A   
Sbjct: 63  KRGKMTPQEERLVLELHAKWGNRWSRIARKLPGRTDNEIKNYWRTHMRKKAQEKKRA--- 122

Query: 121 HVVVSPSSSS----TVDSVPTIDIGEESFYDTGG-DWSCYMGE-----EDEKGYSYSMDD 180
              +SPSSSS    TVDS+P    G+ SFYDTGG +     G+     EDEKG  YSMDD
Sbjct: 123 ---MSPSSSSSTTTTVDSLPFSGNGKVSFYDTGGPNMIALAGKNSPEFEDEKG--YSMDD 182

Query: 181 IWRDID--DQSVVKAVCDE------KLSCGPVASPAPWEYGEYSPPWKVAEENFRI 219
           IW+DID  +++ +K + D         SC  ++SP+ WEY  +  PWK+ EE  ++
Sbjct: 183 IWKDIDLSEENTLKPLGDNYSEEGCNFSCPSMSSPS-WEYC-WDLPWKMDEEESKM 227

[Close]

BLAST of CmaCh01G005700.1 vs. TrEMBL
Match: A0A061GY73_THECC (Myb domain protein 48 isoform 1 OS=Theobroma cacao GN=TCM_041904 PE=4 SV=1)

HSP 1 Score: 267.3 bits (682), Expect = 1.6e-68
Identity = 152/243 (62.55%), Postives = 177/243 (72.84%), Query Frame = 1


Query: 1   MVQEESIRKGPWTEQEDFQLVCFVGLFGDRRWDFIAKVSGLK-------RNGKSCRLRWV 60
           MVQEE IRKGPWTEQED  LV FV LFGDRRWDFIAKVSGLK       R GKSCRLRWV
Sbjct: 3   MVQEE-IRKGPWTEQEDILLVNFVHLFGDRRWDFIAKVSGLKVWRETTDRTGKSCRLRWV 62

Query: 61  NYLHPGLKRGKMSPQEERLVLDLHSKWGNRWSKIARKLPGRTDNEIKNFWRTHVRKLAQE 120
           NYLHPGLKRGKM+PQEERLVL+LH+KWGNRWS+IARKLPGRTDNEIKN+WRTH+RK AQE
Sbjct: 63  NYLHPGLKRGKMTPQEERLVLELHAKWGNRWSRIARKLPGRTDNEIKNYWRTHMRKKAQE 122

Query: 121 KKKAAVHHVVVSPSSSS----TVDSVPTIDIGEESFYDTGG-DWSCYMGE-----EDEKG 180
           KK+A      +SPSSSS    TVDS+P    G+ SFYDTGG +     G+     EDEKG
Sbjct: 123 KKRA------MSPSSSSSTTTTVDSLPFSGNGKVSFYDTGGPNMIALAGKNSPEFEDEKG 182

Query: 181 YSYSMDDIWRDID--DQSVVKAVCDE------KLSCGPVASPAPWEYGEYSPPWKVAEEN 219
             YSMDDIW+DID  +++ +K + D         SC  ++SP+ WEY  +  PWK+ EE 
Sbjct: 183 --YSMDDIWKDIDLSEENTLKPLGDNYSEEGCNFSCPSMSSPS-WEYC-WDLPWKMDEEE 234

[Close]

BLAST of CmaCh01G005700.1 vs. TrEMBL
Match: A0A0B2RCU9_GLYSO (Transcription factor MYB48 OS=Glycine soja GN=glysoja_010577 PE=4 SV=1)

HSP 1 Score: 265.8 bits (678), Expect = 4.7e-68
Identity = 145/242 (59.92%), Postives = 166/242 (68.60%), Query Frame = 1


Query: 1   MVQEESIRKGPWTEQEDFQLVCFVGLFGDRRWDFIAKVSGLKRNGKSCRLRWVNYLHPGL 60
           MVQ+E +RKGPWTEQEDF+LV FVGLFGDRRWDFIAKVSGL R GKSCRLRWVNYLHPGL
Sbjct: 1   MVQQE-VRKGPWTEQEDFKLVSFVGLFGDRRWDFIAKVSGLNRTGKSCRLRWVNYLHPGL 60

Query: 61  KRGKMSPQEERLVLDLHSKWGNRWSKIARKLPGRTDNEIKNFWRTHVRKLAQEKKKAAVH 120
           KRGKM+PQEERLVL+LHSKWGNRWS+IARKLPGRTDNEIKN+WRT +RK AQEKK+    
Sbjct: 61  KRGKMTPQEERLVLELHSKWGNRWSRIARKLPGRTDNEIKNYWRTLMRKKAQEKKRGEAA 120

Query: 121 HVVVSPSS--------SSTVDSVPTIDIGEESFYDTGGDWSCYMGEED--EKGYS---YS 180
               +PSS        +  VD   +   GEESFYDTGGD       +D  +KG     +S
Sbjct: 121 SSSPTPSSVDSSISSNNHAVDPHASKKAGEESFYDTGGDNGVIAATQDQGQKGDQQGLFS 180

Query: 181 MDDIWRDIDDQ-----------SVVKAVCDE--KLSCGP-VASPAPWEYGEYSPPWKVAE 216
           MDDIW+DID+            SV     +E    SC P V SP+ WEY    P W + E
Sbjct: 181 MDDIWKDIDNMSEENNTTLQPVSVYDGHSEEGCNFSCPPQVPSPSSWEYSSSDPLWVMDE 240

[Close]

BLAST of CmaCh01G005700.1 vs. TrEMBL
Match: K7M3C0_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_13G333200 PE=4 SV=1)

HSP 1 Score: 265.8 bits (678), Expect = 4.7e-68
Identity = 145/242 (59.92%), Postives = 166/242 (68.60%), Query Frame = 1


Query: 1   MVQEESIRKGPWTEQEDFQLVCFVGLFGDRRWDFIAKVSGLKRNGKSCRLRWVNYLHPGL 60
           MVQ+E +RKGPWTEQEDF+LV FVGLFGDRRWDFIAKVSGL R GKSCRLRWVNYLHPGL
Sbjct: 1   MVQQE-VRKGPWTEQEDFKLVSFVGLFGDRRWDFIAKVSGLNRTGKSCRLRWVNYLHPGL 60

Query: 61  KRGKMSPQEERLVLDLHSKWGNRWSKIARKLPGRTDNEIKNFWRTHVRKLAQEKKKAAVH 120
           KRGKM+PQEERLVL+LHSKWGNRWS+IARKLPGRTDNEIKN+WRT +RK AQEKK+    
Sbjct: 61  KRGKMTPQEERLVLELHSKWGNRWSRIARKLPGRTDNEIKNYWRTLMRKKAQEKKRGEAA 120

Query: 121 HVVVSPSS--------SSTVDSVPTIDIGEESFYDTGGDWSCYMGEED--EKGYS---YS 180
               +PSS        +  VD   +   GEESFYDTGGD       +D  +KG     +S
Sbjct: 121 SSSPTPSSVDSSISSNNHAVDPHASKKAGEESFYDTGGDNGVIAATQDQGQKGDQQGLFS 180

Query: 181 MDDIWRDIDDQ-----------SVVKAVCDE--KLSCGP-VASPAPWEYGEYSPPWKVAE 216
           MDDIW+DID+            SV     +E    SC P V SP+ WEY    P W + E
Sbjct: 181 MDDIWKDIDNMSEENNTTLQPVSVYDGHSEEGCNFSCPPQVPSPSSWEYSSSDPLWVMDE 240

[Close]

BLAST of CmaCh01G005700.1 vs. TAIR10
Match: AT3G46130.1 (AT3G46130.1 myb domain protein 48)

HSP 1 Score: 250.0 bits (637), Expect = 1.4e-66
Identity = 139/220 (63.18%), Postives = 157/220 (71.36%), Query Frame = 1


Query: 1   MVQEESIRKGPWTEQEDFQLVCFVGLFGDRRWDFIAKVSGLKRNGKSCRLRWVNYLHPGL 60
           M+QEE  RKGPWTEQED  LV FV LFGDRRWDFIAKVSGL R GKSCRLRWVNYLHPGL
Sbjct: 1   MMQEEGNRKGPWTEQEDILLVNFVHLFGDRRWDFIAKVSGLNRTGKSCRLRWVNYLHPGL 60

Query: 61  KRGKMSPQEERLVLDLHSKWGNRWSKIARKLPGRTDNEIKNFWRTHVRKLAQEKKKAAVH 120
           KRGKM+PQEERLVL+LH+KWGNRWSKIARKLPGRTDNEIKN+WRTH+RK AQEKK+    
Sbjct: 61  KRGKMTPQEERLVLELHAKWGNRWSKIARKLPGRTDNEIKNYWRTHMRKKAQEKKRPVSP 120

Query: 121 HVVVSPSSSSTVDSVPT----------IDIGEESFYDTGGDWSC-YMGEEDEKGYSYSMD 180
               S  SSS+V +  T             GE SFYDTGG  S   M +E+E    YS+D
Sbjct: 121 TSSFSNCSSSSVTTTTTNTQDTSCHSRKSSGEVSFYDTGGSRSTREMNQENED--VYSLD 180

Query: 181 DIWRDIDDQSV-----VKAVCDEK---LSCGPVASPAPWE 202
           DIWR+ID  +V     VK +  E+   LS   +ASP+ WE
Sbjct: 181 DIWREIDHSAVNIIKPVKDIYSEQSHCLSYPNLASPS-WE 217

[Close]

BLAST of CmaCh01G005700.1 vs. TAIR10
Match: AT5G59780.3 (AT5G59780.3 myb domain protein 59)

HSP 1 Score: 242.7 bits (618), Expect = 2.2e-64
Identity = 134/210 (63.81%), Postives = 156/210 (74.29%), Query Frame = 1


Query: 1   MVQEESIRKGPWTEQEDFQLVCFVGLFGDRRWDFIAKVSGLKRNGKSCRLRWVNYLHPGL 60
           +VQEE  RKGPWTEQED  LV FV LFGDRRWDF+AKVSGL R GKSCRLRWVNYLHPGL
Sbjct: 3   LVQEE-YRKGPWTEQEDILLVNFVHLFGDRRWDFVAKVSGLNRTGKSCRLRWVNYLHPGL 62

Query: 61  KRGKMSPQEERLVLDLHSKWGNRWSKIARKLPGRTDNEIKNFWRTHVRKLAQEKKKAAVH 120
           KRGKM+PQEERLVL+LH+KWGNRWSKIARKLPGRTDNEIKN+WRTH+RK AQEKK+    
Sbjct: 63  KRGKMTPQEERLVLELHAKWGNRWSKIARKLPGRTDNEIKNYWRTHMRKKAQEKKRP--- 122

Query: 121 HVVVSPSSSSTVDSVPTIDIGEESFYDTGGDWSCYMGEEDEKGYSYSMDDIWRDIDDQ-- 180
              +SP+SSS+  +  +  +   +  DTGG  +  M +E E GY YSMDDIWR+ID    
Sbjct: 123 ---MSPTSSSS--NCCSSSMTTTTSQDTGGS-NGKMNQECEDGY-YSMDDIWREIDQSGA 182

Query: 181 SVVKAVCDE-------KLSCGPVASPAPWE 202
           +V+K V D         L+  P+ASP  WE
Sbjct: 183 NVIKPVKDNYYSEQSCYLNFPPLASPT-WE 200

[Close]

BLAST of CmaCh01G005700.1 vs. TAIR10
Match: AT3G53200.1 (AT3G53200.1 myb domain protein 27)

HSP 1 Score: 171.8 bits (434), Expect = 4.7e-43
Identity = 73/107 (68.22%), Postives = 92/107 (85.98%), Query Frame = 1


Query: 3   QEESIRKGPWTEQEDFQLVCFVGLFGDRRWDFIAKVSGLKRNGKSCRLRWVNYLHPGLKR 62
           +EE++R+GPW E+ED +LV  + L G+RRWD +A VSGLKR+GKSCRLRW+NYL+P LKR
Sbjct: 5   KEETLRRGPWLEEEDERLVKVISLLGERRWDSLAIVSGLKRSGKSCRLRWMNYLNPTLKR 64

Query: 63  GKMSPQEERLVLDLHSKWGNRWSKIARKLPGRTDNEIKNFWRTHVRK 110
           G MS +EER++  LH+ WGN+WSKIAR+LPGRTDNEIKN+WRTH RK
Sbjct: 65  GPMSQEEERIIFQLHALWGNKWSKIARRLPGRTDNEIKNYWRTHYRK 111

[Close]

BLAST of CmaCh01G005700.1 vs. TAIR10
Match: AT3G24310.1 (AT3G24310.1 myb domain protein 305)

HSP 1 Score: 168.3 bits (425), Expect = 5.2e-42
Identity = 72/115 (62.61%), Postives = 92/115 (80.00%), Query Frame = 1


Query: 4   EESIRKGPWTEQEDFQLVCFVGLFGDRRWDFIAKVSGLKRNGKSCRLRWVNYLHPGLKRG 63
           EE  RKGPWT +ED  L+ +V L G+ RW+ +A+++GLKRNGKSCRLRWVNYL P LKRG
Sbjct: 15  EEGWRKGPWTAEEDRLLIDYVQLHGEGRWNSVARLAGLKRNGKSCRLRWVNYLRPDLKRG 74

Query: 64  KMSPQEERLVLDLHSKWGNRWSKIARKLPGRTDNEIKNFWRTHVRKLAQEKKKAA 119
           +++P EE ++L+LH+KWGNRWS IAR LPGRTDNEIKN+WRTH +K  +    +A
Sbjct: 75  QITPHEETIILELHAKWGNRWSTIARSLPGRTDNEIKNYWRTHFKKKTKSPTNSA 129

[Close]

BLAST of CmaCh01G005700.1 vs. TAIR10
Match: AT4G13480.1 (AT4G13480.1 myb domain protein 79)

HSP 1 Score: 167.2 bits (422), Expect = 1.2e-41
Identity = 71/109 (65.14%), Postives = 91/109 (83.49%), Query Frame = 1


Query: 4   EESIRKGPWTEQEDFQLVCFVGLFGDRRWDFIAKVSGLKRNGKSCRLRWVNYLHPGLKRG 63
           EE  RKGPWT +ED  L+ +V + G+ RW+ ++K++GLKRNGKSCRLRWVNYL P LKRG
Sbjct: 3   EEVWRKGPWTAEEDRLLIEYVRVHGEGRWNSVSKLAGLKRNGKSCRLRWVNYLRPDLKRG 62

Query: 64  KMSPQEERLVLDLHSKWGNRWSKIARKLPGRTDNEIKNFWRTHVRKLAQ 113
           +++P EE ++L+LH+KWGNRWS IAR LPGRTDNEIKN+WRTH +K A+
Sbjct: 63  QITPHEESIILELHAKWGNRWSTIARSLPGRTDNEIKNYWRTHFKKKAK 111

[Close]

BLAST of CmaCh01G005700.1 vs. NCBI nr
Match: gi|449467898|ref|XP_004151659.1| (PREDICTED: transcription factor MYB59-like [Cucumis sativus])

HSP 1 Score: 344.0 bits (881), Expect = 2.0e-91
Identity = 171/225 (76.00%), Postives = 196/225 (87.11%), Query Frame = 1


Query: 2   VQEESIRKGPWTEQEDFQLVCFVGLFGDRRWDFIAKVSGLKRNGKSCRLRWVNYLHPGLK 61
           +QEESIRKGPWTEQEDFQLVCFVGLFGDRRWDFIAKVSGLKR GKSCRLRWVNYLHPGLK
Sbjct: 3   IQEESIRKGPWTEQEDFQLVCFVGLFGDRRWDFIAKVSGLKRTGKSCRLRWVNYLHPGLK 62

Query: 62  RGKMSPQEERLVLDLHSKWGNRWSKIARKLPGRTDNEIKNFWRTHVRKLAQEKKKAAVHH 121
           RGKM+P EERLVL+LHSKWGNRWS+IARKLPGRTDNEIKNFWRTH+RK+AQEKKK  V  
Sbjct: 63  RGKMTPHEERLVLELHSKWGNRWSRIARKLPGRTDNEIKNFWRTHMRKVAQEKKKKDV-- 122

Query: 122 VVVSPSSSSTVDSVP-TIDIGEESFYDTGGDWSCYMGEEDEKGYSYSMDDIWRDIDDQS- 181
           VVVSPS+SST+DSVP TI+IGEESFYD+GG+ S     E++KGY Y+MDDIW+DI+DQS 
Sbjct: 123 VVVSPSTSSTIDSVPTTIEIGEESFYDSGGNPS-----EEQKGYCYTMDDIWKDIEDQST 182

Query: 182 -VVKAVCDEK-----LSCGPVASPAPWEYGEYSPPWKVAEENFRI 219
            V+K +CD++     +SCGPV SP  WEYG+YS PWK  EE+ ++
Sbjct: 183 NVMKPLCDDQSYGNFVSCGPVVSPL-WEYGQYS-PWKTVEEDNKL 218

[Close]

BLAST of CmaCh01G005700.1 vs. NCBI nr
Match: gi|659115401|ref|XP_008457537.1| (PREDICTED: transcription factor MYB59-like [Cucumis melo])

HSP 1 Score: 342.8 bits (878), Expect = 4.4e-91
Identity = 173/226 (76.55%), Postives = 194/226 (85.84%), Query Frame = 1


Query: 1   MVQEESIRKGPWTEQEDFQLVCFVGLFGDRRWDFIAKVSGLKRNGKSCRLRWVNYLHPGL 60
           +VQEESIRKGPWTEQEDFQLVCFVGLFGDRRWDFIAKVSGLKR GKSCRLRWVNYLHPGL
Sbjct: 2   VVQEESIRKGPWTEQEDFQLVCFVGLFGDRRWDFIAKVSGLKRTGKSCRLRWVNYLHPGL 61

Query: 61  KRGKMSPQEERLVLDLHSKWGNRWSKIARKLPGRTDNEIKNFWRTHVRKLAQEKKKAAVH 120
           KRGKM+P EERLVL+LHSKWGNRWS+IARKLPGRTDNEIKNFWRTH+RK+AQEKKK    
Sbjct: 62  KRGKMTPHEERLVLELHSKWGNRWSRIARKLPGRTDNEIKNFWRTHMRKVAQEKKKKK-D 121

Query: 121 HVVVSPSSSSTVDSVP-TIDIGEESFYDTGGDWSCYMGEEDEKGYSYSMDDIWRDIDDQS 180
            VVVSPS+SST+DS P TI+IGEESFYDTG + S     E++KGY Y+MDDIWRDI+DQS
Sbjct: 122 IVVVSPSTSSTIDSAPTTIEIGEESFYDTGANPS-----EEQKGYCYTMDDIWRDIEDQS 181

Query: 181 --VVKAVCDEK-----LSCGPVASPAPWEYGEYSPPWKVAEENFRI 219
             VVK +CD++     +SCGPV SP  WEYG+YS PWK  EE+ +I
Sbjct: 182 TNVVKPLCDDQFHGNFVSCGPVVSPL-WEYGQYS-PWKTIEEDNKI 219

[Close]

BLAST of CmaCh01G005700.1 vs. NCBI nr
Match: gi|595831373|ref|XP_007206263.1| (hypothetical protein PRUPE_ppa015954mg, partial [Prunus persica])

HSP 1 Score: 273.9 bits (699), Expect = 2.5e-70
Identity = 150/244 (61.48%), Postives = 172/244 (70.49%), Query Frame = 1


Query: 1   MVQEESIRKGPWTEQEDFQLVCFVGLFGDRRWDFIAKVSGLKRNGKSCRLRWVNYLHPGL 60
           MVQEE+IRKGPWTEQEDF LVCFVGLFGDRRWDFIAKVSGL R GKSCRLRWVNYLHPGL
Sbjct: 1   MVQEENIRKGPWTEQEDFNLVCFVGLFGDRRWDFIAKVSGLNRTGKSCRLRWVNYLHPGL 60

Query: 61  KRGKMSPQEERLVLDLHSKWGNRWSKIARKLPGRTDNEIKNFWRTHVRKLAQEKKKAAVH 120
           KRGKM+PQEERLVL+LHSKWGNRWS+IARKLPGRTDNEIKN+WRTH+RK AQEKK+AA  
Sbjct: 61  KRGKMTPQEERLVLELHSKWGNRWSRIARKLPGRTDNEIKNYWRTHMRKKAQEKKRAA-- 120

Query: 121 HVVVSPSSSS---TVDSVPTIDIGEESFYDTGG-----------DWSCYMGEEDEK---G 180
               SPSSSS   +  S  T   G  SFYDTGG               +  +ED+K    
Sbjct: 121 ----SPSSSSSNCSSSSNITSTEGGASFYDTGGLEIKASSGAKKTGGDHQEQEDDKKRDQ 180

Query: 181 YSYSMDDIWRDID------DQSVVKAVCDEK---LSCGPVASPAPWEYGEYSPPWKVAEE 219
             YS+DDIW+DI+       + V     +E    +SC  +ASPAPWEY   S  W++ EE
Sbjct: 181 KEYSLDDIWKDINLPEVNSIEPVYNGYSEEACNIISCPLMASPAPWEYCSDS-LWEMDEE 237

[Close]

BLAST of CmaCh01G005700.1 vs. NCBI nr
Match: gi|657952491|ref|XP_008357764.1| (PREDICTED: transcription factor MYB59 isoform X1 [Malus domestica])

HSP 1 Score: 273.1 bits (697), Expect = 4.2e-70
Identity = 150/235 (63.83%), Postives = 173/235 (73.62%), Query Frame = 1


Query: 1   MVQE-ESIRKGPWTEQEDFQLVCFVGLFGDRRWDFIAKVSGLKRNGKSCRLRWVNYLHPG 60
           MVQ+ E IRKGPWTEQEDFQLVCFVGLFGDRRWDFIAKVSGLKR GKSCRLRWVNYLHPG
Sbjct: 3   MVQDQEQIRKGPWTEQEDFQLVCFVGLFGDRRWDFIAKVSGLKRTGKSCRLRWVNYLHPG 62

Query: 61  LKRGKMSPQEERLVLDLHSKWGNRWSKIARKLPGRTDNEIKNFWRTHVRKLAQEKKKAAV 120
           LKRGKM+PQEERLVL+LH+KWGNRWS+IARKLPGRTDNEIKN+WRTH+RK AQEKK+A  
Sbjct: 63  LKRGKMTPQEERLVLELHTKWGNRWSRIARKLPGRTDNEIKNYWRTHMRKKAQEKKRA-- 122

Query: 121 HHVVVSPSSSS---TVDSVPTIDIGEESFYDTGGDWSCYM--------------GEEDEK 180
               VSPSSSS   +  S  T   G  SFYDTGG  +  +               E+ E+
Sbjct: 123 ----VSPSSSSSNCSSSSNITTAEGGASFYDTGGKETKALSGGKKTGGGDDAKENEKREQ 182

Query: 181 GYSYSMDDIWRDID--DQSVVKAVCDEKL-SCGPVASPAPWEYGEYSPPWKVAEE 215
           G  YS+DDIW+DI+  + ++++ V D  L SC  +ASP PWEY      WK+ EE
Sbjct: 183 G-EYSLDDIWKDINLPEVNIIEPVYDGNLSSCPLMASPTPWEYCS-DLLWKMDEE 229

[Close]

BLAST of CmaCh01G005700.1 vs. NCBI nr
Match: gi|645216818|ref|XP_008222863.1| (PREDICTED: transcription factor MYB59 [Prunus mume])

HSP 1 Score: 272.7 bits (696), Expect = 5.5e-70
Identity = 149/244 (61.07%), Postives = 172/244 (70.49%), Query Frame = 1


Query: 1   MVQEESIRKGPWTEQEDFQLVCFVGLFGDRRWDFIAKVSGLKRNGKSCRLRWVNYLHPGL 60
           MVQEE+IRKGPWTEQEDF LVCFVGLFGDRRWDFIAKVSGL R GKSCRLRWVNYLHPGL
Sbjct: 3   MVQEENIRKGPWTEQEDFNLVCFVGLFGDRRWDFIAKVSGLNRTGKSCRLRWVNYLHPGL 62

Query: 61  KRGKMSPQEERLVLDLHSKWGNRWSKIARKLPGRTDNEIKNFWRTHVRKLAQEKKKAAVH 120
           KRGKM+PQEERLVL+LHSKWGNRWS+IARKLPGRTDNEIKN+WRTH+RK AQEKK+AA  
Sbjct: 63  KRGKMTPQEERLVLELHSKWGNRWSRIARKLPGRTDNEIKNYWRTHMRKKAQEKKRAA-- 122

Query: 121 HVVVSPSSSS---TVDSVPTIDIGEESFYDTGG-----------DWSCYMGEEDEK---G 180
               SPSSSS   +  S  T   G  SFYDTGG               +  ++D+K    
Sbjct: 123 ----SPSSSSSNCSSSSNITSTEGGASFYDTGGLEIKASSGAKKTGGDHQEQQDDKKRDQ 182

Query: 181 YSYSMDDIWRDID------DQSVVKAVCDEK---LSCGPVASPAPWEYGEYSPPWKVAEE 219
             YS+DDIW+DI+       + V     +E    +SC  +ASPAPWEY   S  W++ EE
Sbjct: 183 KEYSLDDIWKDINLPEVNSIEPVYNGYSEEACNIISCPLMASPAPWEYCSDS-LWEMDEE 239

The following BLAST results are available for this feature:

BLAST of CmaCh01G005700.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
MYB48_ARATH	2.4e-65	63.18	Transcription factor MYB48 OS=Arabidopsis thaliana GN=MYB48 PE=2 SV=1	[more]
MYB59_ARATH	3.8e-63	63.81	Transcription factor MYB59 OS=Arabidopsis thaliana GN=MYB59 PE=2 SV=2	[more]
MYBA2_ORYSJ	1.8e-57	54.21	Myb-related protein MYBAS2 OS=Oryza sativa subsp. japonica GN=MYBAS2 PE=2 SV=1	[more]
MYBA1_ORYSJ	5.9e-56	50.22	Myb-related protein MYBAS1 OS=Oryza sativa subsp. japonica GN=MYBAS1 PE=2 SV=1	[more]
MY108_ARATH	1.1e-36	54.78	Transcription factor MYB108 OS=Arabidopsis thaliana GN=MYB108 PE=1 SV=1	[more]

BLAST of CmaCh01G005700.1 vs. TrEMBL


Match Name	E-value	Identity	Description
M5W156_PRUPE	1.7e-70	61.48	Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa015954mg PE=4 S...	[more]
A0A061GXJ9_THECC	5.0e-70	63.98	Myb domain protein 59 isoform 2 OS=Theobroma cacao GN=TCM_041904 PE=4 SV=1	[more]
A0A061GY73_THECC	1.6e-68	62.55	Myb domain protein 48 isoform 1 OS=Theobroma cacao GN=TCM_041904 PE=4 SV=1	[more]
A0A0B2RCU9_GLYSO	4.7e-68	59.92	Transcription factor MYB48 OS=Glycine soja GN=glysoja_010577 PE=4 SV=1	[more]
K7M3C0_SOYBN	4.7e-68	59.92	Uncharacterized protein OS=Glycine max GN=GLYMA_13G333200 PE=4 SV=1	[more]

BLAST of CmaCh01G005700.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G46130.1	1.4e-66	63.18	myb domain protein 48	[more]
AT5G59780.3	2.2e-64	63.81	myb domain protein 59	[more]
AT3G53200.1	4.7e-43	68.22	myb domain protein 27	[more]
AT3G24310.1	5.2e-42	62.61	myb domain protein 305	[more]
AT4G13480.1	1.2e-41	65.14	myb domain protein 79	[more]

BLAST of CmaCh01G005700.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449467898\|ref\|XP_004151659.1\|	2.0e-91	76.00	PREDICTED: transcription factor MYB59-like [Cucumis sativus]	[more]
gi\|659115401\|ref\|XP_008457537.1\|	4.4e-91	76.55	PREDICTED: transcription factor MYB59-like [Cucumis melo]	[more]
gi\|595831373\|ref\|XP_007206263.1\|	2.5e-70	61.48	hypothetical protein PRUPE_ppa015954mg, partial [Prunus persica]	[more]
gi\|657952491\|ref\|XP_008357764.1\|	4.2e-70	63.83	PREDICTED: transcription factor MYB59 isoform X1 [Malus domestica]	[more]
gi\|645216818\|ref\|XP_008222863.1\|	5.5e-70	61.07	PREDICTED: transcription factor MYB59 [Prunus mume]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR001005	SANT/Myb
IPR009057	Homeobox-like_sf
IPR017930	Myb_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003677	DNA binding

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmaCh01G005700	CmaCh01G005700	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmaCh01G005700.1	CmaCh01G005700.1-protein	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh01G005700.1.exon.1	CmaCh01G005700.1.exon.1	exon
CmaCh01G005700.1.exon.2	CmaCh01G005700.1.exon.2	exon
CmaCh01G005700.1.exon.3	CmaCh01G005700.1.exon.3	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh01G005700.1.five_prime_UTR.1	CmaCh01G005700.1.five_prime_UTR.1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh01G005700.1.CDS.1	CmaCh01G005700.1.CDS.1	CDS
CmaCh01G005700.1.CDS.2	CmaCh01G005700.1.CDS.2	CDS
CmaCh01G005700.1.CDS.3	CmaCh01G005700.1.CDS.3	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh01G005700.1.three_prime_UTR.1	CmaCh01G005700.1.three_prime_UTR.1	three_prime_UTR

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001005	SANT/Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 62..106 score: 2.5E-15coord: 9..56 score: 5.3
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 8..58 score: 1.2E-13coord: 61..109 score: 1.7
IPR009057	Homeodomain-like	GENE3D	G3DSA:1.10.10.60		coord: 10..63 score: 3.3E-18coord: 64..109 score: 5.5
IPR009057	Homeodomain-like	unknown	SSF46689	Homeodomain-like	coord: 6..103 score: 3.48
IPR017930	Myb domain	PROFILE	PS51294	HTH_MYB	coord: 4..56 score: 16.558coord: 57..111 score: 2
None	No IPR available	PANTHER	PTHR10641	MYB-LIKE DNA-BINDING PROTEIN MYB	coord: 1..218 score: 5.8E
None	No IPR available	PANTHER	PTHR10641:SF484	TRANSCRIPTION FACTOR MYB48-RELATED	coord: 1..218 score: 5.8E