CmaCh01G005700 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh01G005700
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	MYB-like DNA-binding domain protein
Location	Cma_Chr01 : 2960173 .. 2961494 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TATATAAATCTCCTACCAACACAATCATCAACAACAAGAACATCAAGAACAAGAGAGAGAAAAACAAGAACAAGATGGTGCAAGAGGAAAGTATCAGAAAAGGGCCATGGACAGAGCAGGAGGACTTCCAATTGGTCTGCTTTGTTGGTTTGTTCGGAGATCGCCGGTGGGATTTCATCGCCAAAGTATCAGGTTTGAAGGTGGCGGGAGAGTACAAATTATAGGTAGGGTTTATTAAAACCCCCCTCTTCTCCTCCTCCTCCTCCACCTCCTCCTCCACCTCCTTTTAACCTACCCCTTTCTCCTCTCTTACAGGCCTGAAAAGAAACGGTAAAAGCTGCCGTCTCCGGTGGGTTAACTACCTCCACCCCGGTCTCAAGCGCGGTAAGATGTCTCCCCAAGAAGAGCGCCTTGTCCTTGACCTCCACTCCAAGTGGGGCAACAGGTGAATACGAGAATTCATGCTCAAAGTGGATAATATCATACAATTGTGGAGAGTCGTCATTCCTAATACCGATTCTGACGTTTTTATTATTTTAGATGGTCTAAGATTGCCCGAAAGCTCCCAGGACGAACGGATAACGAAATAAAGAATTTTTGGCGAACCCATGTGAGAAAATTGGCTCAAGAGAAAAAGAAAGCCGCGGTTCATCATGTTGTGGTGTCGCCGTCGTCCTCATCGACGGTTGACTCGGTCCCGACGATTGATATCGGAGAAGAGAGCTTCTACGACACTGGTGGGGATTGGTCATGTTATATGGGTGAAGAGGATGAAAAGGGTTACTCTTATTCGATGGATGATATTTGGAGAGATATTGATGATCAGAGTGTTGTAAAGGCGGTTTGTGATGAGAAGTTGAGCTGTGGTCCAGTGGCATCACCGGCGCCGTGGGAGTACGGGGAGTACTCGCCGCCGTGGAAGGTGGCGGAGGAAAACTTTAGGATTTAATTCATTTAAATTTGTTAATAGAAGATGTGTTTTTGTTTTAGAGGGTAAGGGGGAAAGCTCTGACCTGTATAGCATTTGGAGTTTTCTTTACACTTTCTTGCACCATCTCATGCATCTTCATGCCCACTTTCTAAGCTACTTTTCTAAGCTTTTGTGTGATATCTTTCCAAATTTTAGATGAAACACAAAATTGGCTCTACTACTCCTCTCTCTCTATCACAAGAATCTACTTTGGGTTAGGTCGGCGGAGTTGCTAGTCCAACTTCAGAAGAAAAAACTCAAAATTAATGAGAGTTTATGAACTTTACTCCTTTACCGGTGTTCTCACTGAGACACCGCCTAGTGTCCACTCAGCTTAATATCTTCACTGTCA

mRNA sequence

TATATAAATCTCCTACCAACACAATCATCAACAACAAGAACATCAAGAACAAGAGAGAGAAAAACAAGAACAAGATGGTGCAAGAGGAAAGTATCAGAAAAGGGCCATGGACAGAGCAGGAGGACTTCCAATTGGTCTGCTTTGTTGGTTTGTTCGGAGATCGCCGGTGGGATTTCATCGCCAAAGTATCAGGCCTGAAAAGAAACGGTAAAAGCTGCCGTCTCCGGTGGGTTAACTACCTCCACCCCGGTCTCAAGCGCGGTAAGATGTCTCCCCAAGAAGAGCGCCTTGTCCTTGACCTCCACTCCAAGTGGGGCAACAGATGGTCTAAGATTGCCCGAAAGCTCCCAGGACGAACGGATAACGAAATAAAGAATTTTTGGCGAACCCATGTGAGAAAATTGGCTCAAGAGAAAAAGAAAGCCGCGGTTCATCATGTTGTGGTGTCGCCGTCGTCCTCATCGACGGTTGACTCGGTCCCGACGATTGATATCGGAGAAGAGAGCTTCTACGACACTGGTGGGGATTGGTCATGTTATATGGGTGAAGAGGATGAAAAGGGTTACTCTTATTCGATGGATGATATTTGGAGAGATATTGATGATCAGAGTGTTGTAAAGGCGGTTTGTGATGAGAAGTTGAGCTGTGGTCCAGTGGCATCACCGGCGCCGTGGGAGTACGGGGAGTACTCGCCGCCGTGGAAGGTGGCGGAGGAAAACTTTAGGATTTAATTCATTTAAATTTGTTAATAGAAGATGTGTTTTTGTTTTAGAGGGTAAGGGGGAAAGCTCTGACCTGTATAGCATTTGGAGTTTTCTTTACACTTTCTTGCACCATCTCATGCATCTTCATGCCCACTTTCTAAGCTACTTTTCTAAGCTTTTGTGTGATATCTTTCCAAATTTTAGATGAAACACAAAATTGGCTCTACTACTCCTCTCTCTCTATCACAAGAATCTACTTTGGGTTAGGTCGGCGGAGTTGCTAGTCCAACTTCAGAAGAAAAAACTCAAAATTAATGAGAGTTTATGAACTTTACTCCTTTACCGGTGTTCTCACTGAGACACCGCCTAGTGTCCACTCAGCTTAATATCTTCACTGTCA

Coding sequence (CDS)

ATGGTGCAAGAGGAAAGTATCAGAAAAGGGCCATGGACAGAGCAGGAGGACTTCCAATTGGTCTGCTTTGTTGGTTTGTTCGGAGATCGCCGGTGGGATTTCATCGCCAAAGTATCAGGCCTGAAAAGAAACGGTAAAAGCTGCCGTCTCCGGTGGGTTAACTACCTCCACCCCGGTCTCAAGCGCGGTAAGATGTCTCCCCAAGAAGAGCGCCTTGTCCTTGACCTCCACTCCAAGTGGGGCAACAGATGGTCTAAGATTGCCCGAAAGCTCCCAGGACGAACGGATAACGAAATAAAGAATTTTTGGCGAACCCATGTGAGAAAATTGGCTCAAGAGAAAAAGAAAGCCGCGGTTCATCATGTTGTGGTGTCGCCGTCGTCCTCATCGACGGTTGACTCGGTCCCGACGATTGATATCGGAGAAGAGAGCTTCTACGACACTGGTGGGGATTGGTCATGTTATATGGGTGAAGAGGATGAAAAGGGTTACTCTTATTCGATGGATGATATTTGGAGAGATATTGATGATCAGAGTGTTGTAAAGGCGGTTTGTGATGAGAAGTTGAGCTGTGGTCCAGTGGCATCACCGGCGCCGTGGGAGTACGGGGAGTACTCGCCGCCGTGGAAGGTGGCGGAGGAAAACTTTAGGATTTAA

Protein sequence

MVQEESIRKGPWTEQEDFQLVCFVGLFGDRRWDFIAKVSGLKRNGKSCRLRWVNYLHPGLKRGKMSPQEERLVLDLHSKWGNRWSKIARKLPGRTDNEIKNFWRTHVRKLAQEKKKAAVHHVVVSPSSSSTVDSVPTIDIGEESFYDTGGDWSCYMGEEDEKGYSYSMDDIWRDIDDQSVVKAVCDEKLSCGPVASPAPWEYGEYSPPWKVAEENFRI

Homology

[Close]

BLAST of CmaCh01G005700 vs. Swiss-Prot
Match: MYB48_ARATH (Transcription factor MYB48 OS=Arabidopsis thaliana GN=MYB48 PE=2 SV=1)

HSP 1 Score: 250.0 bits (637), Expect = 2.4e-65
Identity = 139/220 (63.18%), Postives = 157/220 (71.36%), Query Frame = 1


Query: 1   MVQEESIRKGPWTEQEDFQLVCFVGLFGDRRWDFIAKVSGLKRNGKSCRLRWVNYLHPGL 60
           M+QEE  RKGPWTEQED  LV FV LFGDRRWDFIAKVSGL R GKSCRLRWVNYLHPGL
Sbjct: 1   MMQEEGNRKGPWTEQEDILLVNFVHLFGDRRWDFIAKVSGLNRTGKSCRLRWVNYLHPGL 60

Query: 61  KRGKMSPQEERLVLDLHSKWGNRWSKIARKLPGRTDNEIKNFWRTHVRKLAQEKKKAAVH 120
           KRGKM+PQEERLVL+LH+KWGNRWSKIARKLPGRTDNEIKN+WRTH+RK AQEKK+    
Sbjct: 61  KRGKMTPQEERLVLELHAKWGNRWSKIARKLPGRTDNEIKNYWRTHMRKKAQEKKRPVSP 120

Query: 121 HVVVSPSSSSTVDSVPT----------IDIGEESFYDTGGDWSC-YMGEEDEKGYSYSMD 180
               S  SSS+V +  T             GE SFYDTGG  S   M +E+E    YS+D
Sbjct: 121 TSSFSNCSSSSVTTTTTNTQDTSCHSRKSSGEVSFYDTGGSRSTREMNQENED--VYSLD 180

Query: 181 DIWRDIDDQSV-----VKAVCDEK---LSCGPVASPAPWE 202
           DIWR+ID  +V     VK +  E+   LS   +ASP+ WE
Sbjct: 181 DIWREIDHSAVNIIKPVKDIYSEQSHCLSYPNLASPS-WE 217

[Close]

BLAST of CmaCh01G005700 vs. Swiss-Prot
Match: MYB59_ARATH (Transcription factor MYB59 OS=Arabidopsis thaliana GN=MYB59 PE=2 SV=2)

HSP 1 Score: 242.7 bits (618), Expect = 3.8e-63
Identity = 134/210 (63.81%), Postives = 156/210 (74.29%), Query Frame = 1


Query: 1   MVQEESIRKGPWTEQEDFQLVCFVGLFGDRRWDFIAKVSGLKRNGKSCRLRWVNYLHPGL 60
           +VQEE  RKGPWTEQED  LV FV LFGDRRWDF+AKVSGL R GKSCRLRWVNYLHPGL
Sbjct: 3   LVQEE-YRKGPWTEQEDILLVNFVHLFGDRRWDFVAKVSGLNRTGKSCRLRWVNYLHPGL 62

Query: 61  KRGKMSPQEERLVLDLHSKWGNRWSKIARKLPGRTDNEIKNFWRTHVRKLAQEKKKAAVH 120
           KRGKM+PQEERLVL+LH+KWGNRWSKIARKLPGRTDNEIKN+WRTH+RK AQEKK+    
Sbjct: 63  KRGKMTPQEERLVLELHAKWGNRWSKIARKLPGRTDNEIKNYWRTHMRKKAQEKKRP--- 122

Query: 121 HVVVSPSSSSTVDSVPTIDIGEESFYDTGGDWSCYMGEEDEKGYSYSMDDIWRDIDDQ-- 180
              +SP+SSS+  +  +  +   +  DTGG  +  M +E E GY YSMDDIWR+ID    
Sbjct: 123 ---MSPTSSSS--NCCSSSMTTTTSQDTGGS-NGKMNQECEDGY-YSMDDIWREIDQSGA 182

Query: 181 SVVKAVCDE-------KLSCGPVASPAPWE 202
           +V+K V D         L+  P+ASP  WE
Sbjct: 183 NVIKPVKDNYYSEQSCYLNFPPLASPT-WE 200

[Close]

BLAST of CmaCh01G005700 vs. Swiss-Prot
Match: MYBA2_ORYSJ (Myb-related protein MYBAS2 OS=Oryza sativa subsp. japonica GN=MYBAS2 PE=2 SV=1)

HSP 1 Score: 223.8 bits (569), Expect = 1.8e-57
Identity = 116/214 (54.21%), Postives = 142/214 (66.36%), Query Frame = 1


Query: 5   ESIRKGPWTEQEDFQLVCFVGLFGDRRWDFIAKVSGLKRNGKSCRLRWVNYLHPGLKRGK 64
           E IRKGPWTEQED QLVC V LFG+RRWDFIAKVSGL R GKSCRLRWVNYLHPGLKRG+
Sbjct: 6   EEIRKGPWTEQEDLQLVCTVRLFGERRWDFIAKVSGLNRTGKSCRLRWVNYLHPGLKRGR 65

Query: 65  MSPQEERLVLDLHSKWGNRWSKIARKLPGRTDNEIKNFWRTHVRKLAQEKKKAAVHHVVV 124
           MSP EERL+L+LH++WGNRWS+IAR+LPGRTDNEIKN+WRTH+RK AQE+K        +
Sbjct: 66  MSPHEERLILELHARWGNRWSRIARRLPGRTDNEIKNYWRTHMRKKAQERKSN------M 125

Query: 125 SPSSSSTV-------DSVPTIDIG--EESFYDTGGDWSCYMGEEDEKGYSYSMDDIWRDI 184
           SPSSSS+           P++ IG  E+  +   G  +  M         Y MD IW +I
Sbjct: 126 SPSSSSSSLTYQSCHPETPSMIIGIEEQELHGGSGCITSIMKSTPVDMDGYPMDQIWMEI 185

Query: 185 DDQSVVKAVCDEKLS-------CGPVASPAPWEY 203
           +  +V+   C ++          GP+     W+Y
Sbjct: 186 EAPNVLPGPCFDEAKDSASNSLSGPLLPYPMWDY 213

[Close]

BLAST of CmaCh01G005700 vs. Swiss-Prot
Match: MYBA1_ORYSJ (Myb-related protein MYBAS1 OS=Oryza sativa subsp. japonica GN=MYBAS1 PE=2 SV=1)

HSP 1 Score: 218.8 bits (556), Expect = 5.9e-56
Identity = 115/229 (50.22%), Postives = 146/229 (63.76%), Query Frame = 1


Query: 5   ESIRKGPWTEQEDFQLVCFVGLFGDRRWDFIAKVSGLKRNGKSCRLRWVNYLHPGLKRGK 64
           E +RKGPWTEQED QLVC V LFGDRRWDF+AKVSGL R GKSCRLRWVNYLHPGLK G+
Sbjct: 6   EEMRKGPWTEQEDLQLVCTVRLFGDRRWDFVAKVSGLNRTGKSCRLRWVNYLHPGLKHGR 65

Query: 65  MSPQEERLVLDLHSKWGNRWSKIARKLPGRTDNEIKNFWRTHVRKLAQEKKKAAVHHVVV 124
           MSP+EE L+++LH++WGNRWS+IAR+LPGRTDNEIKN+WRTH+RK AQE++        +
Sbjct: 66  MSPKEEHLIIELHARWGNRWSRIARRLPGRTDNEIKNYWRTHMRKKAQERRGD------M 125

Query: 125 SPSSSST--------VDSVPTIDIGEESFYDTGGDWSCYMGEEDEKGYSYSMDDIWRDID 184
           SPSSSS+        +D+VP I +     +D     +  +         Y+MD IW++I+
Sbjct: 126 SPSSSSSSLVYQSCLLDTVPIISMDGGDIHDDRSCMARVLKSTQSVMDGYTMDQIWKEIE 185

Query: 185 DQSVVKAV-CDEKLSCGPVASPAPW---EYGEYSPP---WKVAEENFRI 219
                  +  DE         P P       +YS P   WK+  E  R+
Sbjct: 186 APGAPSLLGIDEGKDKACSNLPCPLLTSTMSDYSCPEVFWKIDNEETRM 228

[Close]

BLAST of CmaCh01G005700 vs. Swiss-Prot
Match: MY108_ARATH (Transcription factor MYB108 OS=Arabidopsis thaliana GN=MYB108 PE=1 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 1.1e-36
Identity = 63/115 (54.78%), Postives = 93/115 (80.87%), Query Frame = 1


Query: 1   MVQEESIRKGPWTEQEDFQLVCFVGLFGDRRWDFIAKVSGLKRNGKSCRLRWVNYLHPGL 60
           M  E  +++GPWT +EDF+L+ ++   G+ RW+ +++ +GL+R GKSCRLRW+NYL P +
Sbjct: 13  MEDEMDLKRGPWTAEEDFKLMNYIATNGEGRWNSLSRCAGLQRTGKSCRLRWLNYLRPDV 72

Query: 61  KRGKMSPQEERLVLDLHSKWGNRWSKIARKLPGRTDNEIKNFWRTHVRKLAQEKK 116
           +RG ++ +E+ L+L+LHS+WGNRWSKIA+ LPGRTDNEIKN+WRT V+K A++ K
Sbjct: 73  RRGNITLEEQLLILELHSRWGNRWSKIAQYLPGRTDNEIKNYWRTRVQKHAKQLK 127

[Close]

BLAST of CmaCh01G005700 vs. TrEMBL
Match: M5W156_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa015954mg PE=4 SV=1)

HSP 1 Score: 273.9 bits (699), Expect = 1.7e-70
Identity = 150/244 (61.48%), Postives = 172/244 (70.49%), Query Frame = 1


Query: 1   MVQEESIRKGPWTEQEDFQLVCFVGLFGDRRWDFIAKVSGLKRNGKSCRLRWVNYLHPGL 60
           MVQEE+IRKGPWTEQEDF LVCFVGLFGDRRWDFIAKVSGL R GKSCRLRWVNYLHPGL
Sbjct: 1   MVQEENIRKGPWTEQEDFNLVCFVGLFGDRRWDFIAKVSGLNRTGKSCRLRWVNYLHPGL 60

Query: 61  KRGKMSPQEERLVLDLHSKWGNRWSKIARKLPGRTDNEIKNFWRTHVRKLAQEKKKAAVH 120
           KRGKM+PQEERLVL+LHSKWGNRWS+IARKLPGRTDNEIKN+WRTH+RK AQEKK+AA  
Sbjct: 61  KRGKMTPQEERLVLELHSKWGNRWSRIARKLPGRTDNEIKNYWRTHMRKKAQEKKRAA-- 120

Query: 121 HVVVSPSSSS---TVDSVPTIDIGEESFYDTGG-----------DWSCYMGEEDEK---G 180
               SPSSSS   +  S  T   G  SFYDTGG               +  +ED+K    
Sbjct: 121 ----SPSSSSSNCSSSSNITSTEGGASFYDTGGLEIKASSGAKKTGGDHQEQEDDKKRDQ 180

Query: 181 YSYSMDDIWRDID------DQSVVKAVCDEK---LSCGPVASPAPWEYGEYSPPWKVAEE 219
             YS+DDIW+DI+       + V     +E    +SC  +ASPAPWEY   S  W++ EE
Sbjct: 181 KEYSLDDIWKDINLPEVNSIEPVYNGYSEEACNIISCPLMASPAPWEYCSDS-LWEMDEE 237

[Close]

BLAST of CmaCh01G005700 vs. TrEMBL
Match: A0A061GXJ9_THECC (Myb domain protein 59 isoform 2 OS=Theobroma cacao GN=TCM_041904 PE=4 SV=1)

HSP 1 Score: 272.3 bits (695), Expect = 5.0e-70
Identity = 151/236 (63.98%), Postives = 176/236 (74.58%), Query Frame = 1


Query: 1   MVQEESIRKGPWTEQEDFQLVCFVGLFGDRRWDFIAKVSGLKRNGKSCRLRWVNYLHPGL 60
           MVQEE IRKGPWTEQED  LV FV LFGDRRWDFIAKVSGL R GKSCRLRWVNYLHPGL
Sbjct: 3   MVQEE-IRKGPWTEQEDILLVNFVHLFGDRRWDFIAKVSGLNRTGKSCRLRWVNYLHPGL 62

Query: 61  KRGKMSPQEERLVLDLHSKWGNRWSKIARKLPGRTDNEIKNFWRTHVRKLAQEKKKAAVH 120
           KRGKM+PQEERLVL+LH+KWGNRWS+IARKLPGRTDNEIKN+WRTH+RK AQEKK+A   
Sbjct: 63  KRGKMTPQEERLVLELHAKWGNRWSRIARKLPGRTDNEIKNYWRTHMRKKAQEKKRA--- 122

Query: 121 HVVVSPSSSS----TVDSVPTIDIGEESFYDTGG-DWSCYMGE-----EDEKGYSYSMDD 180
              +SPSSSS    TVDS+P    G+ SFYDTGG +     G+     EDEKG  YSMDD
Sbjct: 123 ---MSPSSSSSTTTTVDSLPFSGNGKVSFYDTGGPNMIALAGKNSPEFEDEKG--YSMDD 182

Query: 181 IWRDID--DQSVVKAVCDE------KLSCGPVASPAPWEYGEYSPPWKVAEENFRI 219
           IW+DID  +++ +K + D         SC  ++SP+ WEY  +  PWK+ EE  ++
Sbjct: 183 IWKDIDLSEENTLKPLGDNYSEEGCNFSCPSMSSPS-WEYC-WDLPWKMDEEESKM 227

[Close]

BLAST of CmaCh01G005700 vs. TrEMBL
Match: A0A061GY73_THECC (Myb domain protein 48 isoform 1 OS=Theobroma cacao GN=TCM_041904 PE=4 SV=1)

HSP 1 Score: 267.3 bits (682), Expect = 1.6e-68
Identity = 152/243 (62.55%), Postives = 177/243 (72.84%), Query Frame = 1


Query: 1   MVQEESIRKGPWTEQEDFQLVCFVGLFGDRRWDFIAKVSGLK-------RNGKSCRLRWV 60
           MVQEE IRKGPWTEQED  LV FV LFGDRRWDFIAKVSGLK       R GKSCRLRWV
Sbjct: 3   MVQEE-IRKGPWTEQEDILLVNFVHLFGDRRWDFIAKVSGLKVWRETTDRTGKSCRLRWV 62

Query: 61  NYLHPGLKRGKMSPQEERLVLDLHSKWGNRWSKIARKLPGRTDNEIKNFWRTHVRKLAQE 120
           NYLHPGLKRGKM+PQEERLVL+LH+KWGNRWS+IARKLPGRTDNEIKN+WRTH+RK AQE
Sbjct: 63  NYLHPGLKRGKMTPQEERLVLELHAKWGNRWSRIARKLPGRTDNEIKNYWRTHMRKKAQE 122

Query: 121 KKKAAVHHVVVSPSSSS----TVDSVPTIDIGEESFYDTGG-DWSCYMGE-----EDEKG 180
           KK+A      +SPSSSS    TVDS+P    G+ SFYDTGG +     G+     EDEKG
Sbjct: 123 KKRA------MSPSSSSSTTTTVDSLPFSGNGKVSFYDTGGPNMIALAGKNSPEFEDEKG 182

Query: 181 YSYSMDDIWRDID--DQSVVKAVCDE------KLSCGPVASPAPWEYGEYSPPWKVAEEN 219
             YSMDDIW+DID  +++ +K + D         SC  ++SP+ WEY  +  PWK+ EE 
Sbjct: 183 --YSMDDIWKDIDLSEENTLKPLGDNYSEEGCNFSCPSMSSPS-WEYC-WDLPWKMDEEE 234

[Close]

BLAST of CmaCh01G005700 vs. TrEMBL
Match: A0A0B2RCU9_GLYSO (Transcription factor MYB48 OS=Glycine soja GN=glysoja_010577 PE=4 SV=1)

HSP 1 Score: 265.8 bits (678), Expect = 4.7e-68
Identity = 145/242 (59.92%), Postives = 166/242 (68.60%), Query Frame = 1


Query: 1   MVQEESIRKGPWTEQEDFQLVCFVGLFGDRRWDFIAKVSGLKRNGKSCRLRWVNYLHPGL 60
           MVQ+E +RKGPWTEQEDF+LV FVGLFGDRRWDFIAKVSGL R GKSCRLRWVNYLHPGL
Sbjct: 1   MVQQE-VRKGPWTEQEDFKLVSFVGLFGDRRWDFIAKVSGLNRTGKSCRLRWVNYLHPGL 60

Query: 61  KRGKMSPQEERLVLDLHSKWGNRWSKIARKLPGRTDNEIKNFWRTHVRKLAQEKKKAAVH 120
           KRGKM+PQEERLVL+LHSKWGNRWS+IARKLPGRTDNEIKN+WRT +RK AQEKK+    
Sbjct: 61  KRGKMTPQEERLVLELHSKWGNRWSRIARKLPGRTDNEIKNYWRTLMRKKAQEKKRGEAA 120

Query: 121 HVVVSPSS--------SSTVDSVPTIDIGEESFYDTGGDWSCYMGEED--EKGYS---YS 180
               +PSS        +  VD   +   GEESFYDTGGD       +D  +KG     +S
Sbjct: 121 SSSPTPSSVDSSISSNNHAVDPHASKKAGEESFYDTGGDNGVIAATQDQGQKGDQQGLFS 180

Query: 181 MDDIWRDIDDQ-----------SVVKAVCDE--KLSCGP-VASPAPWEYGEYSPPWKVAE 216
           MDDIW+DID+            SV     +E    SC P V SP+ WEY    P W + E
Sbjct: 181 MDDIWKDIDNMSEENNTTLQPVSVYDGHSEEGCNFSCPPQVPSPSSWEYSSSDPLWVMDE 240

[Close]

BLAST of CmaCh01G005700 vs. TrEMBL
Match: K7M3C0_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_13G333200 PE=4 SV=1)

HSP 1 Score: 265.8 bits (678), Expect = 4.7e-68
Identity = 145/242 (59.92%), Postives = 166/242 (68.60%), Query Frame = 1


Query: 1   MVQEESIRKGPWTEQEDFQLVCFVGLFGDRRWDFIAKVSGLKRNGKSCRLRWVNYLHPGL 60
           MVQ+E +RKGPWTEQEDF+LV FVGLFGDRRWDFIAKVSGL R GKSCRLRWVNYLHPGL
Sbjct: 1   MVQQE-VRKGPWTEQEDFKLVSFVGLFGDRRWDFIAKVSGLNRTGKSCRLRWVNYLHPGL 60

Query: 61  KRGKMSPQEERLVLDLHSKWGNRWSKIARKLPGRTDNEIKNFWRTHVRKLAQEKKKAAVH 120
           KRGKM+PQEERLVL+LHSKWGNRWS+IARKLPGRTDNEIKN+WRT +RK AQEKK+    
Sbjct: 61  KRGKMTPQEERLVLELHSKWGNRWSRIARKLPGRTDNEIKNYWRTLMRKKAQEKKRGEAA 120

Query: 121 HVVVSPSS--------SSTVDSVPTIDIGEESFYDTGGDWSCYMGEED--EKGYS---YS 180
               +PSS        +  VD   +   GEESFYDTGGD       +D  +KG     +S
Sbjct: 121 SSSPTPSSVDSSISSNNHAVDPHASKKAGEESFYDTGGDNGVIAATQDQGQKGDQQGLFS 180

Query: 181 MDDIWRDIDDQ-----------SVVKAVCDE--KLSCGP-VASPAPWEYGEYSPPWKVAE 216
           MDDIW+DID+            SV     +E    SC P V SP+ WEY    P W + E
Sbjct: 181 MDDIWKDIDNMSEENNTTLQPVSVYDGHSEEGCNFSCPPQVPSPSSWEYSSSDPLWVMDE 240

[Close]

BLAST of CmaCh01G005700 vs. TAIR10
Match: AT3G46130.1 (AT3G46130.1 myb domain protein 48)

HSP 1 Score: 250.0 bits (637), Expect = 1.4e-66
Identity = 139/220 (63.18%), Postives = 157/220 (71.36%), Query Frame = 1


Query: 1   MVQEESIRKGPWTEQEDFQLVCFVGLFGDRRWDFIAKVSGLKRNGKSCRLRWVNYLHPGL 60
           M+QEE  RKGPWTEQED  LV FV LFGDRRWDFIAKVSGL R GKSCRLRWVNYLHPGL
Sbjct: 1   MMQEEGNRKGPWTEQEDILLVNFVHLFGDRRWDFIAKVSGLNRTGKSCRLRWVNYLHPGL 60

Query: 61  KRGKMSPQEERLVLDLHSKWGNRWSKIARKLPGRTDNEIKNFWRTHVRKLAQEKKKAAVH 120
           KRGKM+PQEERLVL+LH+KWGNRWSKIARKLPGRTDNEIKN+WRTH+RK AQEKK+    
Sbjct: 61  KRGKMTPQEERLVLELHAKWGNRWSKIARKLPGRTDNEIKNYWRTHMRKKAQEKKRPVSP 120

Query: 121 HVVVSPSSSSTVDSVPT----------IDIGEESFYDTGGDWSC-YMGEEDEKGYSYSMD 180
               S  SSS+V +  T             GE SFYDTGG  S   M +E+E    YS+D
Sbjct: 121 TSSFSNCSSSSVTTTTTNTQDTSCHSRKSSGEVSFYDTGGSRSTREMNQENED--VYSLD 180

Query: 181 DIWRDIDDQSV-----VKAVCDEK---LSCGPVASPAPWE 202
           DIWR+ID  +V     VK +  E+   LS   +ASP+ WE
Sbjct: 181 DIWREIDHSAVNIIKPVKDIYSEQSHCLSYPNLASPS-WE 217

[Close]

BLAST of CmaCh01G005700 vs. TAIR10
Match: AT5G59780.3 (AT5G59780.3 myb domain protein 59)

HSP 1 Score: 242.7 bits (618), Expect = 2.2e-64
Identity = 134/210 (63.81%), Postives = 156/210 (74.29%), Query Frame = 1


Query: 1   MVQEESIRKGPWTEQEDFQLVCFVGLFGDRRWDFIAKVSGLKRNGKSCRLRWVNYLHPGL 60
           +VQEE  RKGPWTEQED  LV FV LFGDRRWDF+AKVSGL R GKSCRLRWVNYLHPGL
Sbjct: 3   LVQEE-YRKGPWTEQEDILLVNFVHLFGDRRWDFVAKVSGLNRTGKSCRLRWVNYLHPGL 62

Query: 61  KRGKMSPQEERLVLDLHSKWGNRWSKIARKLPGRTDNEIKNFWRTHVRKLAQEKKKAAVH 120
           KRGKM+PQEERLVL+LH+KWGNRWSKIARKLPGRTDNEIKN+WRTH+RK AQEKK+    
Sbjct: 63  KRGKMTPQEERLVLELHAKWGNRWSKIARKLPGRTDNEIKNYWRTHMRKKAQEKKRP--- 122

Query: 121 HVVVSPSSSSTVDSVPTIDIGEESFYDTGGDWSCYMGEEDEKGYSYSMDDIWRDIDDQ-- 180
              +SP+SSS+  +  +  +   +  DTGG  +  M +E E GY YSMDDIWR+ID    
Sbjct: 123 ---MSPTSSSS--NCCSSSMTTTTSQDTGGS-NGKMNQECEDGY-YSMDDIWREIDQSGA 182

Query: 181 SVVKAVCDE-------KLSCGPVASPAPWE 202
           +V+K V D         L+  P+ASP  WE
Sbjct: 183 NVIKPVKDNYYSEQSCYLNFPPLASPT-WE 200

[Close]

BLAST of CmaCh01G005700 vs. TAIR10
Match: AT3G53200.1 (AT3G53200.1 myb domain protein 27)

HSP 1 Score: 171.8 bits (434), Expect = 4.7e-43
Identity = 73/107 (68.22%), Postives = 92/107 (85.98%), Query Frame = 1


Query: 3   QEESIRKGPWTEQEDFQLVCFVGLFGDRRWDFIAKVSGLKRNGKSCRLRWVNYLHPGLKR 62
           +EE++R+GPW E+ED +LV  + L G+RRWD +A VSGLKR+GKSCRLRW+NYL+P LKR
Sbjct: 5   KEETLRRGPWLEEEDERLVKVISLLGERRWDSLAIVSGLKRSGKSCRLRWMNYLNPTLKR 64

Query: 63  GKMSPQEERLVLDLHSKWGNRWSKIARKLPGRTDNEIKNFWRTHVRK 110
           G MS +EER++  LH+ WGN+WSKIAR+LPGRTDNEIKN+WRTH RK
Sbjct: 65  GPMSQEEERIIFQLHALWGNKWSKIARRLPGRTDNEIKNYWRTHYRK 111

[Close]

BLAST of CmaCh01G005700 vs. TAIR10
Match: AT3G24310.1 (AT3G24310.1 myb domain protein 305)

HSP 1 Score: 168.3 bits (425), Expect = 5.2e-42
Identity = 72/115 (62.61%), Postives = 92/115 (80.00%), Query Frame = 1


Query: 4   EESIRKGPWTEQEDFQLVCFVGLFGDRRWDFIAKVSGLKRNGKSCRLRWVNYLHPGLKRG 63
           EE  RKGPWT +ED  L+ +V L G+ RW+ +A+++GLKRNGKSCRLRWVNYL P LKRG
Sbjct: 15  EEGWRKGPWTAEEDRLLIDYVQLHGEGRWNSVARLAGLKRNGKSCRLRWVNYLRPDLKRG 74

Query: 64  KMSPQEERLVLDLHSKWGNRWSKIARKLPGRTDNEIKNFWRTHVRKLAQEKKKAA 119
           +++P EE ++L+LH+KWGNRWS IAR LPGRTDNEIKN+WRTH +K  +    +A
Sbjct: 75  QITPHEETIILELHAKWGNRWSTIARSLPGRTDNEIKNYWRTHFKKKTKSPTNSA 129

[Close]

BLAST of CmaCh01G005700 vs. TAIR10
Match: AT4G13480.1 (AT4G13480.1 myb domain protein 79)

HSP 1 Score: 167.2 bits (422), Expect = 1.2e-41
Identity = 71/109 (65.14%), Postives = 91/109 (83.49%), Query Frame = 1


Query: 4   EESIRKGPWTEQEDFQLVCFVGLFGDRRWDFIAKVSGLKRNGKSCRLRWVNYLHPGLKRG 63
           EE  RKGPWT +ED  L+ +V + G+ RW+ ++K++GLKRNGKSCRLRWVNYL P LKRG
Sbjct: 3   EEVWRKGPWTAEEDRLLIEYVRVHGEGRWNSVSKLAGLKRNGKSCRLRWVNYLRPDLKRG 62

Query: 64  KMSPQEERLVLDLHSKWGNRWSKIARKLPGRTDNEIKNFWRTHVRKLAQ 113
           +++P EE ++L+LH+KWGNRWS IAR LPGRTDNEIKN+WRTH +K A+
Sbjct: 63  QITPHEESIILELHAKWGNRWSTIARSLPGRTDNEIKNYWRTHFKKKAK 111

[Close]

BLAST of CmaCh01G005700 vs. NCBI nr
Match: gi|449467898|ref|XP_004151659.1| (PREDICTED: transcription factor MYB59-like [Cucumis sativus])

HSP 1 Score: 344.0 bits (881), Expect = 2.0e-91
Identity = 171/225 (76.00%), Postives = 196/225 (87.11%), Query Frame = 1


Query: 2   VQEESIRKGPWTEQEDFQLVCFVGLFGDRRWDFIAKVSGLKRNGKSCRLRWVNYLHPGLK 61
           +QEESIRKGPWTEQEDFQLVCFVGLFGDRRWDFIAKVSGLKR GKSCRLRWVNYLHPGLK
Sbjct: 3   IQEESIRKGPWTEQEDFQLVCFVGLFGDRRWDFIAKVSGLKRTGKSCRLRWVNYLHPGLK 62

Query: 62  RGKMSPQEERLVLDLHSKWGNRWSKIARKLPGRTDNEIKNFWRTHVRKLAQEKKKAAVHH 121
           RGKM+P EERLVL+LHSKWGNRWS+IARKLPGRTDNEIKNFWRTH+RK+AQEKKK  V  
Sbjct: 63  RGKMTPHEERLVLELHSKWGNRWSRIARKLPGRTDNEIKNFWRTHMRKVAQEKKKKDV-- 122

Query: 122 VVVSPSSSSTVDSVP-TIDIGEESFYDTGGDWSCYMGEEDEKGYSYSMDDIWRDIDDQS- 181
           VVVSPS+SST+DSVP TI+IGEESFYD+GG+ S     E++KGY Y+MDDIW+DI+DQS 
Sbjct: 123 VVVSPSTSSTIDSVPTTIEIGEESFYDSGGNPS-----EEQKGYCYTMDDIWKDIEDQST 182

Query: 182 -VVKAVCDEK-----LSCGPVASPAPWEYGEYSPPWKVAEENFRI 219
            V+K +CD++     +SCGPV SP  WEYG+YS PWK  EE+ ++
Sbjct: 183 NVMKPLCDDQSYGNFVSCGPVVSPL-WEYGQYS-PWKTVEEDNKL 218

[Close]

BLAST of CmaCh01G005700 vs. NCBI nr
Match: gi|659115401|ref|XP_008457537.1| (PREDICTED: transcription factor MYB59-like [Cucumis melo])

HSP 1 Score: 342.8 bits (878), Expect = 4.4e-91
Identity = 173/226 (76.55%), Postives = 194/226 (85.84%), Query Frame = 1


Query: 1   MVQEESIRKGPWTEQEDFQLVCFVGLFGDRRWDFIAKVSGLKRNGKSCRLRWVNYLHPGL 60
           +VQEESIRKGPWTEQEDFQLVCFVGLFGDRRWDFIAKVSGLKR GKSCRLRWVNYLHPGL
Sbjct: 2   VVQEESIRKGPWTEQEDFQLVCFVGLFGDRRWDFIAKVSGLKRTGKSCRLRWVNYLHPGL 61

Query: 61  KRGKMSPQEERLVLDLHSKWGNRWSKIARKLPGRTDNEIKNFWRTHVRKLAQEKKKAAVH 120
           KRGKM+P EERLVL+LHSKWGNRWS+IARKLPGRTDNEIKNFWRTH+RK+AQEKKK    
Sbjct: 62  KRGKMTPHEERLVLELHSKWGNRWSRIARKLPGRTDNEIKNFWRTHMRKVAQEKKKKK-D 121

Query: 121 HVVVSPSSSSTVDSVP-TIDIGEESFYDTGGDWSCYMGEEDEKGYSYSMDDIWRDIDDQS 180
            VVVSPS+SST+DS P TI+IGEESFYDTG + S     E++KGY Y+MDDIWRDI+DQS
Sbjct: 122 IVVVSPSTSSTIDSAPTTIEIGEESFYDTGANPS-----EEQKGYCYTMDDIWRDIEDQS 181

Query: 181 --VVKAVCDEK-----LSCGPVASPAPWEYGEYSPPWKVAEENFRI 219
             VVK +CD++     +SCGPV SP  WEYG+YS PWK  EE+ +I
Sbjct: 182 TNVVKPLCDDQFHGNFVSCGPVVSPL-WEYGQYS-PWKTIEEDNKI 219

[Close]

BLAST of CmaCh01G005700 vs. NCBI nr
Match: gi|595831373|ref|XP_007206263.1| (hypothetical protein PRUPE_ppa015954mg, partial [Prunus persica])

HSP 1 Score: 273.9 bits (699), Expect = 2.5e-70
Identity = 150/244 (61.48%), Postives = 172/244 (70.49%), Query Frame = 1


Query: 1   MVQEESIRKGPWTEQEDFQLVCFVGLFGDRRWDFIAKVSGLKRNGKSCRLRWVNYLHPGL 60
           MVQEE+IRKGPWTEQEDF LVCFVGLFGDRRWDFIAKVSGL R GKSCRLRWVNYLHPGL
Sbjct: 1   MVQEENIRKGPWTEQEDFNLVCFVGLFGDRRWDFIAKVSGLNRTGKSCRLRWVNYLHPGL 60

Query: 61  KRGKMSPQEERLVLDLHSKWGNRWSKIARKLPGRTDNEIKNFWRTHVRKLAQEKKKAAVH 120
           KRGKM+PQEERLVL+LHSKWGNRWS+IARKLPGRTDNEIKN+WRTH+RK AQEKK+AA  
Sbjct: 61  KRGKMTPQEERLVLELHSKWGNRWSRIARKLPGRTDNEIKNYWRTHMRKKAQEKKRAA-- 120

Query: 121 HVVVSPSSSS---TVDSVPTIDIGEESFYDTGG-----------DWSCYMGEEDEK---G 180
               SPSSSS   +  S  T   G  SFYDTGG               +  +ED+K    
Sbjct: 121 ----SPSSSSSNCSSSSNITSTEGGASFYDTGGLEIKASSGAKKTGGDHQEQEDDKKRDQ 180

Query: 181 YSYSMDDIWRDID------DQSVVKAVCDEK---LSCGPVASPAPWEYGEYSPPWKVAEE 219
             YS+DDIW+DI+       + V     +E    +SC  +ASPAPWEY   S  W++ EE
Sbjct: 181 KEYSLDDIWKDINLPEVNSIEPVYNGYSEEACNIISCPLMASPAPWEYCSDS-LWEMDEE 237

[Close]

BLAST of CmaCh01G005700 vs. NCBI nr
Match: gi|657952491|ref|XP_008357764.1| (PREDICTED: transcription factor MYB59 isoform X1 [Malus domestica])

HSP 1 Score: 273.1 bits (697), Expect = 4.2e-70
Identity = 150/235 (63.83%), Postives = 173/235 (73.62%), Query Frame = 1


Query: 1   MVQE-ESIRKGPWTEQEDFQLVCFVGLFGDRRWDFIAKVSGLKRNGKSCRLRWVNYLHPG 60
           MVQ+ E IRKGPWTEQEDFQLVCFVGLFGDRRWDFIAKVSGLKR GKSCRLRWVNYLHPG
Sbjct: 3   MVQDQEQIRKGPWTEQEDFQLVCFVGLFGDRRWDFIAKVSGLKRTGKSCRLRWVNYLHPG 62

Query: 61  LKRGKMSPQEERLVLDLHSKWGNRWSKIARKLPGRTDNEIKNFWRTHVRKLAQEKKKAAV 120
           LKRGKM+PQEERLVL+LH+KWGNRWS+IARKLPGRTDNEIKN+WRTH+RK AQEKK+A  
Sbjct: 63  LKRGKMTPQEERLVLELHTKWGNRWSRIARKLPGRTDNEIKNYWRTHMRKKAQEKKRA-- 122

Query: 121 HHVVVSPSSSS---TVDSVPTIDIGEESFYDTGGDWSCYM--------------GEEDEK 180
               VSPSSSS   +  S  T   G  SFYDTGG  +  +               E+ E+
Sbjct: 123 ----VSPSSSSSNCSSSSNITTAEGGASFYDTGGKETKALSGGKKTGGGDDAKENEKREQ 182

Query: 181 GYSYSMDDIWRDID--DQSVVKAVCDEKL-SCGPVASPAPWEYGEYSPPWKVAEE 215
           G  YS+DDIW+DI+  + ++++ V D  L SC  +ASP PWEY      WK+ EE
Sbjct: 183 G-EYSLDDIWKDINLPEVNIIEPVYDGNLSSCPLMASPTPWEYCS-DLLWKMDEE 229

[Close]

BLAST of CmaCh01G005700 vs. NCBI nr
Match: gi|645216818|ref|XP_008222863.1| (PREDICTED: transcription factor MYB59 [Prunus mume])

HSP 1 Score: 272.7 bits (696), Expect = 5.5e-70
Identity = 149/244 (61.07%), Postives = 172/244 (70.49%), Query Frame = 1


Query: 1   MVQEESIRKGPWTEQEDFQLVCFVGLFGDRRWDFIAKVSGLKRNGKSCRLRWVNYLHPGL 60
           MVQEE+IRKGPWTEQEDF LVCFVGLFGDRRWDFIAKVSGL R GKSCRLRWVNYLHPGL
Sbjct: 3   MVQEENIRKGPWTEQEDFNLVCFVGLFGDRRWDFIAKVSGLNRTGKSCRLRWVNYLHPGL 62

Query: 61  KRGKMSPQEERLVLDLHSKWGNRWSKIARKLPGRTDNEIKNFWRTHVRKLAQEKKKAAVH 120
           KRGKM+PQEERLVL+LHSKWGNRWS+IARKLPGRTDNEIKN+WRTH+RK AQEKK+AA  
Sbjct: 63  KRGKMTPQEERLVLELHSKWGNRWSRIARKLPGRTDNEIKNYWRTHMRKKAQEKKRAA-- 122

Query: 121 HVVVSPSSSS---TVDSVPTIDIGEESFYDTGG-----------DWSCYMGEEDEK---G 180
               SPSSSS   +  S  T   G  SFYDTGG               +  ++D+K    
Sbjct: 123 ----SPSSSSSNCSSSSNITSTEGGASFYDTGGLEIKASSGAKKTGGDHQEQQDDKKRDQ 182

Query: 181 YSYSMDDIWRDID------DQSVVKAVCDEK---LSCGPVASPAPWEYGEYSPPWKVAEE 219
             YS+DDIW+DI+       + V     +E    +SC  +ASPAPWEY   S  W++ EE
Sbjct: 183 KEYSLDDIWKDINLPEVNSIEPVYNGYSEEACNIISCPLMASPAPWEYCSDS-LWEMDEE 239

The following BLAST results are available for this feature:

BLAST of CmaCh01G005700 vs. Swiss-Prot


Match Name	E-value	Identity	Description
MYB48_ARATH	2.4e-65	63.18	Transcription factor MYB48 OS=Arabidopsis thaliana GN=MYB48 PE=2 SV=1	[more]
MYB59_ARATH	3.8e-63	63.81	Transcription factor MYB59 OS=Arabidopsis thaliana GN=MYB59 PE=2 SV=2	[more]
MYBA2_ORYSJ	1.8e-57	54.21	Myb-related protein MYBAS2 OS=Oryza sativa subsp. japonica GN=MYBAS2 PE=2 SV=1	[more]
MYBA1_ORYSJ	5.9e-56	50.22	Myb-related protein MYBAS1 OS=Oryza sativa subsp. japonica GN=MYBAS1 PE=2 SV=1	[more]
MY108_ARATH	1.1e-36	54.78	Transcription factor MYB108 OS=Arabidopsis thaliana GN=MYB108 PE=1 SV=1	[more]

BLAST of CmaCh01G005700 vs. TrEMBL


Match Name	E-value	Identity	Description
M5W156_PRUPE	1.7e-70	61.48	Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa015954mg PE=4 S...	[more]
A0A061GXJ9_THECC	5.0e-70	63.98	Myb domain protein 59 isoform 2 OS=Theobroma cacao GN=TCM_041904 PE=4 SV=1	[more]
A0A061GY73_THECC	1.6e-68	62.55	Myb domain protein 48 isoform 1 OS=Theobroma cacao GN=TCM_041904 PE=4 SV=1	[more]
A0A0B2RCU9_GLYSO	4.7e-68	59.92	Transcription factor MYB48 OS=Glycine soja GN=glysoja_010577 PE=4 SV=1	[more]
K7M3C0_SOYBN	4.7e-68	59.92	Uncharacterized protein OS=Glycine max GN=GLYMA_13G333200 PE=4 SV=1	[more]

BLAST of CmaCh01G005700 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G46130.1	1.4e-66	63.18	myb domain protein 48	[more]
AT5G59780.3	2.2e-64	63.81	myb domain protein 59	[more]
AT3G53200.1	4.7e-43	68.22	myb domain protein 27	[more]
AT3G24310.1	5.2e-42	62.61	myb domain protein 305	[more]
AT4G13480.1	1.2e-41	65.14	myb domain protein 79	[more]

BLAST of CmaCh01G005700 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449467898\|ref\|XP_004151659.1\|	2.0e-91	76.00	PREDICTED: transcription factor MYB59-like [Cucumis sativus]	[more]
gi\|659115401\|ref\|XP_008457537.1\|	4.4e-91	76.55	PREDICTED: transcription factor MYB59-like [Cucumis melo]	[more]
gi\|595831373\|ref\|XP_007206263.1\|	2.5e-70	61.48	hypothetical protein PRUPE_ppa015954mg, partial [Prunus persica]	[more]
gi\|657952491\|ref\|XP_008357764.1\|	4.2e-70	63.83	PREDICTED: transcription factor MYB59 isoform X1 [Malus domestica]	[more]
gi\|645216818\|ref\|XP_008222863.1\|	5.5e-70	61.07	PREDICTED: transcription factor MYB59 [Prunus mume]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001005	SANT/Myb
IPR009057	Homeobox-like_sf
IPR017930	Myb_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003677	DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh01G005700.1	CmaCh01G005700.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001005	SANT/Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 62..106 score: 2.5E-15coord: 9..56 score: 5.3
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 8..58 score: 1.2E-13coord: 61..109 score: 1.7
IPR009057	Homeodomain-like	GENE3D	G3DSA:1.10.10.60		coord: 10..63 score: 3.3E-18coord: 64..109 score: 5.5
IPR009057	Homeodomain-like	unknown	SSF46689	Homeodomain-like	coord: 6..103 score: 3.48
IPR017930	Myb domain	PROFILE	PS51294	HTH_MYB	coord: 4..56 score: 16.558coord: 57..111 score: 2
None	No IPR available	PANTHER	PTHR10641	MYB-LIKE DNA-BINDING PROTEIN MYB	coord: 1..218 score: 5.8E
None	No IPR available	PANTHER	PTHR10641:SF484	TRANSCRIPTION FACTOR MYB48-RELATED	coord: 1..218 score: 5.8E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh01G005700	Cucsa.213500	Cucumber (Gy14) v1	cgycmaB0615
CmaCh01G005700	Cla013280	Watermelon (97103) v1	cmawmB453
CmaCh01G005700	Cla008279	Watermelon (97103) v1	cmawmB429
CmaCh01G005700	Csa1G482740	Cucumber (Chinese Long) v2	cmacuB427
CmaCh01G005700	Csa6G303240	Cucumber (Chinese Long) v2	cmacuB488
CmaCh01G005700	MELO3C020701	Melon (DHL92) v3.5.1	cmameB391
CmaCh01G005700	MELO3C013677	Melon (DHL92) v3.5.1	cmameB388
CmaCh01G005700	ClCG02G020440	Watermelon (Charleston Gray)	cmawcgB397
CmaCh01G005700	ClCG03G001870	Watermelon (Charleston Gray)	cmawcgB404
CmaCh01G005700	CSPI01G22510	Wild cucumber (PI 183967)	cmacpiB430
CmaCh01G005700	CmoCh01G005970	Cucurbita moschata (Rifu)	cmacmoB468
CmaCh01G005700	CmoCh02G008330	Cucurbita moschata (Rifu)	cmacmoB475
CmaCh01G005700	CmoCh13G001580	Cucurbita moschata (Rifu)	cmacmoB458
CmaCh01G005700	CmoCh20G004650	Cucurbita moschata (Rifu)	cmacmoB473
CmaCh01G005700	Lsi10G013470	Bottle gourd (USVL1VR-Ls)	cmalsiB400
CmaCh01G005700	Lsi02G013900	Bottle gourd (USVL1VR-Ls)	cmalsiB417
CmaCh01G005700	Cp4.1LG02g13130	Cucurbita pepo (Zucchini)	cmacpeB491
CmaCh01G005700	Cp4.1LG20g08800	Cucurbita pepo (Zucchini)	cmacpeB483
CmaCh01G005700	MELO3C013677.2	Melon (DHL92) v3.6.1	cmamedB448
CmaCh01G005700	MELO3C020701.2	Melon (DHL92) v3.6.1	cmamedB451
CmaCh01G005700	CsaV3_1G033690	Cucumber (Chinese Long) v3	cmacucB0512
CmaCh01G005700	Cla97C03G052880	Watermelon (97103) v2	cmawmbB467
CmaCh01G005700	Cla97C02G046390	Watermelon (97103) v2	cmawmbB458
CmaCh01G005700	Bhi08G000336	Wax gourd	cmawgoB0589
CmaCh01G005700	Bhi10G000537	Wax gourd	cmawgoB0581
CmaCh01G005700	CsGy1G022090	Cucumber (Gy14) v2	cgybcmaB104
CmaCh01G005700	Carg20274	Silver-seed gourd	carcmaB0423
CmaCh01G005700	Carg12342	Silver-seed gourd	carcmaB0613

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmaCh01G005700	CmaCh02G008290	Cucurbita maxima (Rimu)	cmacmaB418
CmaCh01G005700	CmaCh13G001540	Cucurbita maxima (Rimu)	cmacmaB220
CmaCh01G005700	CmaCh20G004290	Cucurbita maxima (Rimu)	cmacmaB416

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh01G005700	Silver-seed gourd	carcmaB0422
CmaCh01G005700	Silver-seed gourd	carcmaB0470
CmaCh01G005700	Silver-seed gourd	carcmaB1018
CmaCh01G005700	Cucumber (Chinese Long) v3	cmacucB0562
CmaCh01G005700	Cucumber (Chinese Long) v3	cmacucB0575
CmaCh01G005700	Cucumber (Chinese Long) v3	cmacucB0578
CmaCh01G005700	Watermelon (97103) v2	cmawmbB472
CmaCh01G005700	Watermelon (97103) v2	cmawmbB495
CmaCh01G005700	Wax gourd	cmawgoB0579
CmaCh01G005700	Wild cucumber (PI 183967)	cmacpiB489
CmaCh01G005700	Melon (DHL92) v3.5.1	cmameB386
CmaCh01G005700	Watermelon (Charleston Gray)	cmawcgB399
CmaCh01G005700	Watermelon (97103) v1	cmawmB455
CmaCh01G005700	Cucurbita pepo (Zucchini)	cmacpeB470
CmaCh01G005700	Cucurbita pepo (Zucchini)	cmacpeB471
CmaCh01G005700	Cucurbita pepo (Zucchini)	cmacpeB500
CmaCh01G005700	Cucurbita pepo (Zucchini)	cmacpeB501
CmaCh01G005700	Bottle gourd (USVL1VR-Ls)	cmalsiB398
CmaCh01G005700	Cucumber (Gy14) v2	cgybcmaB513
CmaCh01G005700	Cucumber (Gy14) v2	cgybcmaB775
CmaCh01G005700	Melon (DHL92) v3.6.1	cmamedB446