Cla97C10G185700.1 (mRNA) Watermelon (97103) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla97C10G185700.1
Type	mRNA
Organism	Citrullus lanatus (Watermelon (97103) v2)
Description	protein PAM68, chloroplastic
Location	Cla97Chr10 : 1040243 .. 1042079 (-)
Sequence length	627

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGCCATTGCCGGTTCTCTCAACCTTCCTCTTGCGCCTTCAAACCTTCCATCACTCCATGTTAAGGTACTTTTCTCATTACGCCTCCCCATTGCTATTTTTCTTTGAGTTCCGTAAGAACCTTTTCACCTATAACTACTTCGATCATACCTAAACGAAAGGAAGATGGAGGATTCTTTAATCTGAACTGTTCATCAATCGATTTTTCATACGTTTATCCATCAGCAATCGGTTTCTTAAACATTAGGAGTTAGGATTTAGGATTTACTTTACCAGGGATACTTTTAAAACCTAGAACGATCCTTTGATCCATTTCAATGATAACTACTTGAATTATACTGAAATGGAAAGAACACGAAGGATTCTTTAATCTAAACAATCATGAATCGAGTTTCCATTTCGATTGGTTTCTAAACATTAGGAATTAGGATTTGGGATTGATACCTGTAAAATCTAGAGTGATTCATCGATCCAGTTCAATGATAACTATTTGATTGTTGAATTATACGGAAGCTAGAAGAAGATGAAGGATTTTTTTTTTAAAAAAAAGAAAATTTAATCTGAACTATTCATCAACCGATTTTCCATTTAGATTGGTTTCCAAACATACGGGGTTAAAAGAAAAGTTTTGAAAAGTAAGTCCTATAAAGAGAGCCCGTGAATTTGGTTTTAAATTAAGTTGTCCTACCTAGAAATACTTTAAATTTAATTATCGCCTTTCAAGGCAAGGCTCATAAAATCGCCTTTCAAGGCAAAGGCTCATAAAATAAGGCATGCGACTTCGGTAGAGCCCCAAGCCTCAAAGCCATAGAAATTAGGGCAAGGACTTTTTCATTATTTTTAAAAGTAGTAACAATTAAGATTTTTCCTTTTTTATTAATTAAAAAAATCAAATTTATTAAGTCCAAATGCAAAATTTTTTGTGTTTAGGGGTTTTCTTTCATATTTTGGATCTTTTTTGCTTCTTATGCTCGAGCCCCAGGAGAATGTTTGAACTTTAAAAAACCACTAGTTTGAGAGTGAGAAAACCGGTGTGAATATTACATTTTTTCATATAGTAGATTTTTTTATGATGGGTTGTGATTTTTCTTCAGTTTTAGAGTTTTTCACGTAATTTTTTGTGATTCCTAGTTTAGTTTTTTATTTTTATTTTTAATTTTTCAATTCTTTTGCGCTACTAGCAGGAGGTTTTTCCTACCAAGATTGATACTTGTGAAATCTAAAGTGATTCGTTCATCCGATTTCTATCACTAACAAATTTATATGTGTTTTGCAGATAAATTGTAAACTCTCAAACTATTCGAAAAGCTACGAAAGGAGCTGTTTCCCAAATTTGAGACCGAGCATTAATCAAAACCAAACCCGCATGAATCACTCAACGATTTTAAATGCAACATTGAGACGTCCGAAGGGATTCGGACCAGCTCCAAGGAGGAAAAAGACAAAGAAAACAAAAGGAGAAGGAAGCGAGGACGAAGACGAAAACGAAGAAGACGAAGAAGAAGAAGAGGAAGGTGGTGTAATACCAGAAGTAGTGACAAACAGGATGATTAGTAGAATGGGATTTTCAGTGGGGATTCCATTGTTGATAGGGCTTTTGTTCTTCCCATTCTTCTATTACCTCAAAGTTGGGCTGAAGATTGATGTGCCCTCATGGGTGCCAGTTATAGTCTCATTCTTCTTCTTTGGTTCAGCTTTGTTGGGAGTTAGCTATGGGATTGTGTCCTCTAGTTGGGATCCTATGAGGGAAGGCTCTCTGTTGGGTTGGAATGAAGCTCAAAAGAATTGGCCTGTTTTTTGGCAGTCCATTTGGGGTGGATCTAATAAGAAATAG

mRNA sequence

ATGGCGGCCATTGCCGGTTCTCTCAACCTTCCTCTTGCGCCTTCAAACCTTCCATCACTCCATGTTAAGATAAATTGTAAACTCTCAAACTATTCGAAAAGCTACGAAAGGAGCTGTTTCCCAAATTTGAGACCGAGCATTAATCAAAACCAAACCCGCATGAATCACTCAACGATTTTAAATGCAACATTGAGACGTCCGAAGGGATTCGGACCAGCTCCAAGGAGGAAAAAGACAAAGAAAACAAAAGGAGAAGGAAGCGAGGACGAAGACGAAAACGAAGAAGACGAAGAAGAAGAAGAGGAAGGTGGTGTAATACCAGAAGTAGTGACAAACAGGATGATTAGTAGAATGGGATTTTCAGTGGGGATTCCATTGTTGATAGGGCTTTTGTTCTTCCCATTCTTCTATTACCTCAAAGTTGGGCTGAAGATTGATGTGCCCTCATGGGTGCCAGTTATAGTCTCATTCTTCTTCTTTGGTTCAGCTTTGTTGGGAGTTAGCTATGGGATTGTGTCCTCTAGTTGGGATCCTATGAGGGAAGGCTCTCTGTTGGGTTGGAATGAAGCTCAAAAGAATTGGCCTGTTTTTTGGCAGTCCATTTGGGGTGGATCTAATAAGAAATAG

Coding sequence (CDS)

ATGGCGGCCATTGCCGGTTCTCTCAACCTTCCTCTTGCGCCTTCAAACCTTCCATCACTCCATGTTAAGATAAATTGTAAACTCTCAAACTATTCGAAAAGCTACGAAAGGAGCTGTTTCCCAAATTTGAGACCGAGCATTAATCAAAACCAAACCCGCATGAATCACTCAACGATTTTAAATGCAACATTGAGACGTCCGAAGGGATTCGGACCAGCTCCAAGGAGGAAAAAGACAAAGAAAACAAAAGGAGAAGGAAGCGAGGACGAAGACGAAAACGAAGAAGACGAAGAAGAAGAAGAGGAAGGTGGTGTAATACCAGAAGTAGTGACAAACAGGATGATTAGTAGAATGGGATTTTCAGTGGGGATTCCATTGTTGATAGGGCTTTTGTTCTTCCCATTCTTCTATTACCTCAAAGTTGGGCTGAAGATTGATGTGCCCTCATGGGTGCCAGTTATAGTCTCATTCTTCTTCTTTGGTTCAGCTTTGTTGGGAGTTAGCTATGGGATTGTGTCCTCTAGTTGGGATCCTATGAGGGAAGGCTCTCTGTTGGGTTGGAATGAAGCTCAAAAGAATTGGCCTGTTTTTTGGCAGTCCATTTGGGGTGGATCTAATAAGAAATAG

Protein sequence

MAAIAGSLNLPLAPSNLPSLHVKINCKLSNYSKSYERSCFPNLRPSINQNQTRMNHSTILNATLRRPKGFGPAPRRKKTKKTKGEGSEDEDENEEDEEEEEEGGVIPEVVTNRMISRMGFSVGIPLLIGLLFFPFFYYLKVGLKIDVPSWVPVIVSFFFFGSALLGVSYGIVSSSWDPMREGSLLGWNEAQKNWPVFWQSIWGGSNKK

Homology

[Close]

BLAST of Cla97C10G185700.1 vs. NCBI nr
Match: XP_008448605.1 (PREDICTED: protein PAM68, chloroplastic isoform X2 [Cucumis melo])

HSP 1 Score: 302.4 bits (773), Expect = 1.2e-78
Identity = 188/216 (87.04%), Postives = 195/216 (90.28%), Query Frame = 0


Query: 1   MAAIAGSLNLPLAPSNLPSLHVKINCKLSNYSKSYERSCFPNLRPSINQNQTRMNHSTIL 60
           MAAIAGSLNLPLAPSNLP L +K NC+ S + KSYER+CFPN RP+INQNQTR NH T L
Sbjct: 1   MAAIAGSLNLPLAPSNLPLLRIKKNCEFSIHIKSYERNCFPNFRPTINQNQTRTNHPTSL 60

Query: 61  NATLRRPKGFG--------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGVIPEVVTN 120
           NATLRRPKGFG        XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  VIPEVVTN
Sbjct: 61  NATLRRPKGFGPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVIPEVVTN 120

Query: 121 RMISRMGFSVGIPLLIGLLFFPFFYYLKVGLKIDVPSWVPVIVSFFFFGSALLGVSYGIV 180
           RM+SRMGF+VGIPL IGLLFFPFFYYLKVGLKIDVPSWVPVIVSFFFFGSALLGVSYGIV
Sbjct: 121 RMMSRMGFTVGIPLFIGLLFFPFFYYLKVGLKIDVPSWVPVIVSFFFFGSALLGVSYGIV 180

Query: 181 SSSWDPMREGSLLGWNEAQKNWPVFWQSIWGGSNKK 209
           SSSWDPMREGSLLGWNEAQKNWPVFWQSIWGGSNKK
Sbjct: 181 SSSWDPMREGSLLGWNEAQKNWPVFWQSIWGGSNKK 216

[Close]

BLAST of Cla97C10G185700.1 vs. NCBI nr
Match: XP_008448604.1 (PREDICTED: protein PAM68, chloroplastic isoform X1 [Cucumis melo])

HSP 1 Score: 297.7 bits (761), Expect = 3.0e-77
Identity = 188/217 (86.64%), Postives = 195/217 (89.86%), Query Frame = 0


Query: 1   MAAIAGSLNLPLAPSNLPSLHVK-INCKLSNYSKSYERSCFPNLRPSINQNQTRMNHSTI 60
           MAAIAGSLNLPLAPSNLP L +K  NC+ S + KSYER+CFPN RP+INQNQTR NH T 
Sbjct: 1   MAAIAGSLNLPLAPSNLPLLRIKQKNCEFSIHIKSYERNCFPNFRPTINQNQTRTNHPTS 60

Query: 61  LNATLRRPKGFG--------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGVIPEVVT 120
           LNATLRRPKGFG        XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  VIPEVVT
Sbjct: 61  LNATLRRPKGFGPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVIPEVVT 120

Query: 121 NRMISRMGFSVGIPLLIGLLFFPFFYYLKVGLKIDVPSWVPVIVSFFFFGSALLGVSYGI 180
           NRM+SRMGF+VGIPL IGLLFFPFFYYLKVGLKIDVPSWVPVIVSFFFFGSALLGVSYGI
Sbjct: 121 NRMMSRMGFTVGIPLFIGLLFFPFFYYLKVGLKIDVPSWVPVIVSFFFFGSALLGVSYGI 180

Query: 181 VSSSWDPMREGSLLGWNEAQKNWPVFWQSIWGGSNKK 209
           VSSSWDPMREGSLLGWNEAQKNWPVFWQSIWGGSNKK
Sbjct: 181 VSSSWDPMREGSLLGWNEAQKNWPVFWQSIWGGSNKK 217

[Close]

BLAST of Cla97C10G185700.1 vs. NCBI nr
Match: XP_023540526.1 (protein PAM68, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 283.1 bits (723), Expect = 7.6e-73
Identity = 185/213 (86.85%), Postives = 192/213 (90.14%), Query Frame = 0


Query: 1   MAAIAGSLNLPLAPSNLPSLHVKINCKLSNYSKSYERSCFPNLRPSINQNQTRMNHSTIL 60
           MAAIAGSLNLPLAPS LPSLH+  N  LS  SKS++R+ F  LRPS+ QNQTR NH+ I+
Sbjct: 1   MAAIAGSLNLPLAPSQLPSLHITRNYNLSIQSKSHKRNYFSLLRPSLYQNQTRTNHTLIV 60

Query: 61  NATLRRPKGFG----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGVIPEVVTNRMIS 120
           NATLR PKGFG    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX GVIPEVVTNRMIS
Sbjct: 61  NATLRSPKGFGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVIPEVVTNRMIS 120

Query: 121 RMGFSVGIPLLIGLLFFPFFYYLKVGLKIDVPSWVPVIVSFFFFGSALLGVSYGIVSSSW 180
           RMGFSVGIPLLIGLLFFPFFYYLKV LKIDVPSWVPVIVSFFFFGSALLGVSYGIVSSSW
Sbjct: 121 RMGFSVGIPLLIGLLFFPFFYYLKVVLKIDVPSWVPVIVSFFFFGSALLGVSYGIVSSSW 180

Query: 181 DPMREGSLLGWNEAQKNWPVFWQSIW-GGSNKK 209
           DPMREGSLLGWNEAQKNWPVFWQSIW GGSNKK
Sbjct: 181 DPMREGSLLGWNEAQKNWPVFWQSIWSGGSNKK 213

[Close]

BLAST of Cla97C10G185700.1 vs. NCBI nr
Match: XP_023005760.1 (protein PAM68, chloroplastic [Cucurbita maxima])

HSP 1 Score: 281.2 bits (718), Expect = 2.9e-72
Identity = 184/213 (86.38%), Postives = 191/213 (89.67%), Query Frame = 0


Query: 1   MAAIAGSLNLPLAPSNLPSLHVKINCKLSNYSKSYERSCFPNLRPSINQNQTRMNHSTIL 60
           MAAI GSLNLPLAPS LPSLH+    KLS  SKS++R+ F  LRPS+ QNQTR NH+ I+
Sbjct: 1   MAAITGSLNLPLAPSKLPSLHITRKYKLSIQSKSHKRNYFSLLRPSLYQNQTRTNHTLIV 60

Query: 61  NATLRRPKGFG----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGVIPEVVTNRMIS 120
           NATLR PKGFG    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX GVIPEVVTNRMIS
Sbjct: 61  NATLRSPKGFGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVIPEVVTNRMIS 120

Query: 121 RMGFSVGIPLLIGLLFFPFFYYLKVGLKIDVPSWVPVIVSFFFFGSALLGVSYGIVSSSW 180
           RMGFSVGIPLLIGLLFFPFFYYLKV LKIDVPSWVPVIVSFFFFGSALLGVSYGIVSSSW
Sbjct: 121 RMGFSVGIPLLIGLLFFPFFYYLKVVLKIDVPSWVPVIVSFFFFGSALLGVSYGIVSSSW 180

Query: 181 DPMREGSLLGWNEAQKNWPVFWQSIW-GGSNKK 209
           DPMREGSLLGWNEAQKNWPVFWQSIW GGSNKK
Sbjct: 181 DPMREGSLLGWNEAQKNWPVFWQSIWSGGSNKK 213

[Close]

BLAST of Cla97C10G185700.1 vs. NCBI nr
Match: XP_022949106.1 (protein PAM68, chloroplastic [Cucurbita moschata])

HSP 1 Score: 280.8 bits (717), Expect = 3.8e-72
Identity = 184/212 (86.79%), Postives = 190/212 (89.62%), Query Frame = 0


Query: 1   MAAIAGSLNLPLAPSNLPSLHVKINCKLSNYSKSYERSCFPNLRPSINQNQTRMNHSTIL 60
           MAAI GSLNLPLAPS LPSLH+  N  LS  SKS +R+ F  LRPS+ QNQTR NH+ I+
Sbjct: 1   MAAITGSLNLPLAPSKLPSLHITRNYNLSIQSKSQKRNYFSLLRPSLYQNQTRTNHTLIV 60

Query: 61  NATLRRPKGFG---XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGVIPEVVTNRMISR 120
           NATLR PKGFG   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX GVIPEVVTNRMISR
Sbjct: 61  NATLRSPKGFGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVIPEVVTNRMISR 120

Query: 121 MGFSVGIPLLIGLLFFPFFYYLKVGLKIDVPSWVPVIVSFFFFGSALLGVSYGIVSSSWD 180
           MGFSVGIPLLIGLLFFPFFYYLKV LKIDVPSWVPVIVSFFFFGSALLGVSYGIVSSSWD
Sbjct: 121 MGFSVGIPLLIGLLFFPFFYYLKVVLKIDVPSWVPVIVSFFFFGSALLGVSYGIVSSSWD 180

Query: 181 PMREGSLLGWNEAQKNWPVFWQSIW-GGSNKK 209
           PMREGSLLGWNEAQKNWPVFWQSIW GGSNKK
Sbjct: 181 PMREGSLLGWNEAQKNWPVFWQSIWSGGSNKK 212

[Close]

BLAST of Cla97C10G185700.1 vs. TrEMBL
Match: tr|A0A1S3BKY8|A0A1S3BKY8_CUCME (protein PAM68, chloroplastic isoform X2 OS=Cucumis melo OX=3656 GN=LOC103490730 PE=4 SV=1)

HSP 1 Score: 302.4 bits (773), Expect = 8.0e-79
Identity = 188/216 (87.04%), Postives = 195/216 (90.28%), Query Frame = 0


Query: 1   MAAIAGSLNLPLAPSNLPSLHVKINCKLSNYSKSYERSCFPNLRPSINQNQTRMNHSTIL 60
           MAAIAGSLNLPLAPSNLP L +K NC+ S + KSYER+CFPN RP+INQNQTR NH T L
Sbjct: 1   MAAIAGSLNLPLAPSNLPLLRIKKNCEFSIHIKSYERNCFPNFRPTINQNQTRTNHPTSL 60

Query: 61  NATLRRPKGFG--------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGVIPEVVTN 120
           NATLRRPKGFG        XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  VIPEVVTN
Sbjct: 61  NATLRRPKGFGPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVIPEVVTN 120

Query: 121 RMISRMGFSVGIPLLIGLLFFPFFYYLKVGLKIDVPSWVPVIVSFFFFGSALLGVSYGIV 180
           RM+SRMGF+VGIPL IGLLFFPFFYYLKVGLKIDVPSWVPVIVSFFFFGSALLGVSYGIV
Sbjct: 121 RMMSRMGFTVGIPLFIGLLFFPFFYYLKVGLKIDVPSWVPVIVSFFFFGSALLGVSYGIV 180

Query: 181 SSSWDPMREGSLLGWNEAQKNWPVFWQSIWGGSNKK 209
           SSSWDPMREGSLLGWNEAQKNWPVFWQSIWGGSNKK
Sbjct: 181 SSSWDPMREGSLLGWNEAQKNWPVFWQSIWGGSNKK 216

[Close]

BLAST of Cla97C10G185700.1 vs. TrEMBL
Match: tr|A0A1S3BKQ0|A0A1S3BKQ0_CUCME (protein PAM68, chloroplastic isoform X1 OS=Cucumis melo OX=3656 GN=LOC103490730 PE=4 SV=1)

HSP 1 Score: 297.7 bits (761), Expect = 2.0e-77
Identity = 188/217 (86.64%), Postives = 195/217 (89.86%), Query Frame = 0


Query: 1   MAAIAGSLNLPLAPSNLPSLHVK-INCKLSNYSKSYERSCFPNLRPSINQNQTRMNHSTI 60
           MAAIAGSLNLPLAPSNLP L +K  NC+ S + KSYER+CFPN RP+INQNQTR NH T 
Sbjct: 1   MAAIAGSLNLPLAPSNLPLLRIKQKNCEFSIHIKSYERNCFPNFRPTINQNQTRTNHPTS 60

Query: 61  LNATLRRPKGFG--------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGVIPEVVT 120
           LNATLRRPKGFG        XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  VIPEVVT
Sbjct: 61  LNATLRRPKGFGPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVIPEVVT 120

Query: 121 NRMISRMGFSVGIPLLIGLLFFPFFYYLKVGLKIDVPSWVPVIVSFFFFGSALLGVSYGI 180
           NRM+SRMGF+VGIPL IGLLFFPFFYYLKVGLKIDVPSWVPVIVSFFFFGSALLGVSYGI
Sbjct: 121 NRMMSRMGFTVGIPLFIGLLFFPFFYYLKVGLKIDVPSWVPVIVSFFFFGSALLGVSYGI 180

Query: 181 VSSSWDPMREGSLLGWNEAQKNWPVFWQSIWGGSNKK 209
           VSSSWDPMREGSLLGWNEAQKNWPVFWQSIWGGSNKK
Sbjct: 181 VSSSWDPMREGSLLGWNEAQKNWPVFWQSIWGGSNKK 217

[Close]

BLAST of Cla97C10G185700.1 vs. TrEMBL
Match: tr|A0A0A0L507|A0A0A0L507_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G006590 PE=4 SV=1)

HSP 1 Score: 275.8 bits (704), Expect = 8.0e-71
Identity = 178/213 (83.57%), Postives = 186/213 (87.32%), Query Frame = 0


Query: 1   MAAIAGSLNLPLAPSNLPSLHVKINCKLSNYSKSYERSCFPNLRPSI--NQNQTRMNHST 60
           MAAIAGSLNLPLAPSNLP L +K NCK S + KS ER+CFPNLRP+I  NQNQT  N  T
Sbjct: 1   MAAIAGSLNLPLAPSNLPLLRIKKNCKFSLHIKSNERNCFPNLRPTINQNQNQTHTNRPT 60

Query: 61  ILNATLRRPKGFG---XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGVIPEVVTNRMI 120
            LNATLRRPKGFG   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX         NRM+
Sbjct: 61  SLNATLRRPKGFGPASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNRMM 120

Query: 121 SRMGFSVGIPLLIGLLFFPFFYYLKVGLKIDVPSWVPVIVSFFFFGSALLGVSYGIVSSS 180
           SRMGF+VGIPL IGLLFFPFFYYLKVGLKIDVPSWVPVIVSFFFFGSALLGVSYGIVSSS
Sbjct: 121 SRMGFTVGIPLFIGLLFFPFFYYLKVGLKIDVPSWVPVIVSFFFFGSALLGVSYGIVSSS 180

Query: 181 WDPMREGSLLGWNEAQKNWPVFWQSIWGGSNKK 209
           WDP+REGSLLGWNEAQKNWPVFW+SIWGGSNKK
Sbjct: 181 WDPLREGSLLGWNEAQKNWPVFWKSIWGGSNKK 213

[Close]

BLAST of Cla97C10G185700.1 vs. TrEMBL
Match: tr|A0A2G9I4T1|A0A2G9I4T1_9LAMI (Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_02504 PE=4 SV=1)

HSP 1 Score: 216.1 bits (549), Expect = 7.6e-53
Identity = 133/172 (77.33%), Postives = 150/172 (87.21%), Query Frame = 0


Query: 37  RSCFPNLRPSINQNQTRMNHSTILNATLRRPKGFGXXXXXXXXXXXXXXXXXXXXXXXXX 96
           R+ FP + P +++NQ  + H + ++ATL  PKGFG       XXXXXXXXXXXXXXXXXX
Sbjct: 24  RTQFPIVSPMLSKNQFCLIHLSPVSATLNSPKGFG--PTPKKXXXXXXXXXXXXXXXXXX 83

Query: 97  XXXXXXGGVIPEVVTNRMISRMGFSVGIPLLIGLLFFPFFYYLKVGLKIDVPSWVPVIVS 156
           XXXXXX G+IPE+VTNRM++RMGFSVGIPL IGLLFFPFFYYLKVGLKIDVP+WVP IVS
Sbjct: 84  XXXXXXXGIIPEIVTNRMMNRMGFSVGIPLFIGLLFFPFFYYLKVGLKIDVPTWVPFIVS 143

Query: 157 FFFFGSALLGVSYGIVSSSWDPMREGSLLGWNEAQKNWPVFWQSIWGGSNKK 209
           FFFFG+ALLGVSYGIVS+SWDP+REGSLLGWNEAQKNWPVFWQSIWGGS KK
Sbjct: 144 FFFFGTALLGVSYGIVSASWDPLREGSLLGWNEAQKNWPVFWQSIWGGSKKK 193

[Close]

BLAST of Cla97C10G185700.1 vs. TrEMBL
Match: tr|A0A067KK85|A0A067KK85_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_10801 PE=4 SV=1)

HSP 1 Score: 214.9 bits (546), Expect = 1.7e-52
Identity = 148/214 (69.16%), Postives = 167/214 (78.04%), Query Frame = 0


Query: 1   MAAIAGSLNLP-----LAPSNLPSLHVKINCKLSNYSKSYERSCFPNLRPSINQNQTRMN 60
           MA++ G+L  P       PS + S+  + +   S+     + S FP  + +  QNQ   +
Sbjct: 1   MASMEGALIRPSFSTLSLPSKIDSVFEQASTFTSSLIPVKQTSHFPVSKQNFYQNQYYFS 60

Query: 61  HSTILNATLRRPKGFG-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGVIPEVVTNRM 120
           +S  + ATL  P+GFG    XXXXXXXXXXXXXXXXXXXXXXXXXXXX G+IPEVVTNRM
Sbjct: 61  YSRPVYATLNSPRGFGPPPKXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGIIPEVVTNRM 120

Query: 121 ISRMGFSVGIPLLIGLLFFPFFYYLKVGLKIDVPSWVPVIVSFFFFGSALLGVSYGIVSS 180
           ISRMGFSVGIPL IGLLFFPFFYYLKVGLKIDVP+WVP IVSFFFFGSALLGVSYGIVSS
Sbjct: 121 ISRMGFSVGIPLFIGLLFFPFFYYLKVGLKIDVPTWVPFIVSFFFFGSALLGVSYGIVSS 180

Query: 181 SWDPMREGSLLGWNEAQKNWPVFWQSIWGGSNKK 209
           SWDP+REGSLLGWNEAQKNWPVFWQS+WG S KK
Sbjct: 181 SWDPLREGSLLGWNEAQKNWPVFWQSLWGRSGKK 214

[Close]

BLAST of Cla97C10G185700.1 vs. Swiss-Prot
Match: sp|O49668|PAM68_ARATH (Protein PAM68, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PAM68 PE=1 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 2.6e-48
Identity = 88/105 (83.81%), Postives = 98/105 (93.33%), Query Frame = 0


Query: 104 GVIPEVVTNRMISRMGFSVGIPLLIGLLFFPFFYYLKVGLKIDVPSWVPVIVSFFFFGSA 163
           GVIPE+VTNRMISRMGF+VG+PL IGLLFFPFFYYLKVGLK+DVP+WVP IVSF FFG+A
Sbjct: 110 GVIPEIVTNRMISRMGFTVGLPLFIGLLFFPFFYYLKVGLKVDVPTWVPFIVSFVFFGTA 169

Query: 164 LLGVSYGIVSSSWDPMREGSLLGWNEAQKNWPVFWQSIWGGSNKK 209
           L GVSYGIVSSSWDP+REGSLLGWNEA+KNWPVFWQS W  S+K+
Sbjct: 170 LAGVSYGIVSSSWDPLREGSLLGWNEAKKNWPVFWQSFWNSSDKR 214

[Close]

BLAST of Cla97C10G185700.1 vs. Swiss-Prot
Match: sp|Q9LTD9|Y5278_ARATH (Uncharacterized protein PAM68-like OS=Arabidopsis thaliana OX=3702 GN=At5g52780 PE=2 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 3.0e-12
Identity = 38/94 (40.43%), Postives = 55/94 (58.51%), Query Frame = 0


Query: 106 IPEVVTNRMISRMGFSVGIPLLIGLLFFPFFYYLKVGLKIDVPSWVPVIVSFFFFGSALL 165
           IP+ V  RM+ R+  SVG PL +G+        LK     DVP WVP + +   FGS+ L
Sbjct: 72  IPQEVFERMMGRIVVSVGTPLGLGVAILKVLEVLKDRNVWDVPLWVPYLTTLVTFGSSAL 131

Query: 166 GVSYGIVSSSWDPMREGSLLGWNEAQKNWPVFWQ 200
           G++YG +S++ DP +  SL G  EA++NW   W+
Sbjct: 132 GIAYGSLSTNLDPAKTNSLFGLKEAKENWVEMWK 165

[Close]

BLAST of Cla97C10G185700.1 vs. TAIR10
Match: AT4G19100.1 (Protein of unknown function (DUF3464))

HSP 1 Score: 193.4 bits (490), Expect = 1.4e-49
Identity = 88/105 (83.81%), Postives = 98/105 (93.33%), Query Frame = 0


Query: 104 GVIPEVVTNRMISRMGFSVGIPLLIGLLFFPFFYYLKVGLKIDVPSWVPVIVSFFFFGSA 163
           GVIPE+VTNRMISRMGF+VG+PL IGLLFFPFFYYLKVGLK+DVP+WVP IVSF FFG+A
Sbjct: 110 GVIPEIVTNRMISRMGFTVGLPLFIGLLFFPFFYYLKVGLKVDVPTWVPFIVSFVFFGTA 169

Query: 164 LLGVSYGIVSSSWDPMREGSLLGWNEAQKNWPVFWQSIWGGSNKK 209
           L GVSYGIVSSSWDP+REGSLLGWNEA+KNWPVFWQS W  S+K+
Sbjct: 170 LAGVSYGIVSSSWDPLREGSLLGWNEAKKNWPVFWQSFWNSSDKR 214

[Close]

BLAST of Cla97C10G185700.1 vs. TAIR10
Match: AT5G52780.1 (Protein of unknown function (DUF3464))

HSP 1 Score: 73.6 bits (179), Expect = 1.7e-13
Identity = 38/94 (40.43%), Postives = 55/94 (58.51%), Query Frame = 0


Query: 106 IPEVVTNRMISRMGFSVGIPLLIGLLFFPFFYYLKVGLKIDVPSWVPVIVSFFFFGSALL 165
           IP+ V  RM+ R+  SVG PL +G+        LK     DVP WVP + +   FGS+ L
Sbjct: 72  IPQEVFERMMGRIVVSVGTPLGLGVAILKVLEVLKDRNVWDVPLWVPYLTTLVTFGSSAL 131

Query: 166 GVSYGIVSSSWDPMREGSLLGWNEAQKNWPVFWQ 200
           G++YG +S++ DP +  SL G  EA++NW   W+
Sbjct: 132 GIAYGSLSTNLDPAKTNSLFGLKEAKENWVEMWK 165

The following BLAST results are available for this feature:

BLAST of Cla97C10G185700.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008448605.1	1.2e-78	87.04	PREDICTED: protein PAM68, chloroplastic isoform X2 [Cucumis melo]	[more]
XP_008448604.1	3.0e-77	86.64	PREDICTED: protein PAM68, chloroplastic isoform X1 [Cucumis melo]	[more]
XP_023540526.1	7.6e-73	86.85	protein PAM68, chloroplastic [Cucurbita pepo subsp. pepo]	[more]
XP_023005760.1	2.9e-72	86.38	protein PAM68, chloroplastic [Cucurbita maxima]	[more]
XP_022949106.1	3.8e-72	86.79	protein PAM68, chloroplastic [Cucurbita moschata]	[more]

BLAST of Cla97C10G185700.1 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BKY8\|A0A1S3BKY8_CUCME	8.0e-79	87.04	protein PAM68, chloroplastic isoform X2 OS=Cucumis melo OX=3656 GN=LOC103490730 ...	[more]
tr\|A0A1S3BKQ0\|A0A1S3BKQ0_CUCME	2.0e-77	86.64	protein PAM68, chloroplastic isoform X1 OS=Cucumis melo OX=3656 GN=LOC103490730 ...	[more]
tr\|A0A0A0L507\|A0A0A0L507_CUCSA	8.0e-71	83.57	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G006590 PE=4 SV=1	[more]
tr\|A0A2G9I4T1\|A0A2G9I4T1_9LAMI	7.6e-53	77.33	Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_02504 P...	[more]
tr\|A0A067KK85\|A0A067KK85_JATCU	1.7e-52	69.16	Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_10801 PE=4 SV=1	[more]

BLAST of Cla97C10G185700.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|O49668\|PAM68_ARATH	2.6e-48	83.81	Protein PAM68, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PAM68 PE=1 SV=1	[more]
sp\|Q9LTD9\|Y5278_ARATH	3.0e-12	40.43	Uncharacterized protein PAM68-like OS=Arabidopsis thaliana OX=3702 GN=At5g52780 ...	[more]

BLAST of Cla97C10G185700.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G19100.1	1.4e-49	83.81	Protein of unknown function (DUF3464)	[more]
AT5G52780.1	1.7e-13	40.43	Protein of unknown function (DUF3464)	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR021855	PAM68-like

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0016020	membrane

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cla97C10G185700	Cla97C10G185700	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cla97C10G185700.1.CDS.2	Cla97C10G185700.1.CDS.2	CDS
Cla97C10G185700.1.CDS.1	Cla97C10G185700.1.CDS.1	CDS

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cla97C10G185700.1.exon.2	Cla97C10G185700.1.exon.2	exon
Cla97C10G185700.1.exon.1	Cla97C10G185700.1.exon.1	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cla97C10G185700.1	Cla97C10G185700.1-protein	polypeptide

InterPro

Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021855	PAM68-like	PFAM	PF11947	DUF3464	coord: 75..200 e-value: 6.7E-51 score: 171.9
IPR021855	PAM68-like	PANTHER	PTHR34575	FAMILY NOT NAMED	coord: 28..208
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 65..104
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 88..104
None	No IPR available	PANTHER	PTHR34575:SF2	PROTEIN PAM68, CHLOROPLASTIC	coord: 28..208