Cla97C06G113530.1 (mRNA) Watermelon (97103) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla97C06G113530.1
Type	mRNA
Organism	Citrullus lanatus (Watermelon (97103) v2)
Description	Hydrolase, hydrolyzing O-glycosyl compounds, putative
Location	Cla97Chr06 : 4432048 .. 4432549 (+)
Sequence length	351

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTGCAAGGTAATTATATTAATTATTCTAGTAATAACTTGTGATCCCATACAACAAAAGAATCATCGTGAAGAAATTGTTACATACAAACCATAAATTACTAAACCAATTTGTAAGTTTAAAATAGAATTTAATTGTGTTGCATTTTTGCGGCATATAGATCCAAGTTCCAATGCATCGTCTTCTTATGTTATGTATCATCCACAAAGTGGTCAATGTGCCCAAGTTTCAAATGACAATACTGGAATTTTTTTGAGTAATTGTTCCACCTCAAGTCAATGGAGTCATGGTGATGATGGCACTCCAATCAAAAGGAGGACAAATGGTTTGTGTTTAAAGGCTAATGGCGAAGGTGTTGGAGCATCCCTCTCAAGTGATTGTTTGGGTCAACAAAGTGTTTGGAGAGCAATTTCTAACGTAATCTTCATTTGGCCACTGTCACTCAAGATGGGAAGAGTCTTTGCTTGTAGGTTGAAAGCTCCAATTCTTCAAAAATTGTGA

mRNA sequence

ATGTTGCAAGATCCAAGTTCCAATGCATCGTCTTCTTATGTTATGTATCATCCACAAAGTGGTCAATGTGCCCAAGTTTCAAATGACAATACTGGAATTTTTTTGAGTAATTGTTCCACCTCAAGTCAATGGAGTCATGGTGATGATGGCACTCCAATCAAAAGGAGGACAAATGGTTTGTGTTTAAAGGCTAATGGCGAAGGTGTTGGAGCATCCCTCTCAAGTGATTGTTTGGGTCAACAAAGTGTTTGGAGAGCAATTTCTAACGTAATCTTCATTTGGCCACTGTCACTCAAGATGGGAAGAGTCTTTGCTTGTAGGTTGAAAGCTCCAATTCTTCAAAAATTGTGA

Coding sequence (CDS)

ATGTTGCAAGATCCAAGTTCCAATGCATCGTCTTCTTATGTTATGTATCATCCACAAAGTGGTCAATGTGCCCAAGTTTCAAATGACAATACTGGAATTTTTTTGAGTAATTGTTCCACCTCAAGTCAATGGAGTCATGGTGATGATGGCACTCCAATCAAAAGGAGGACAAATGGTTTGTGTTTAAAGGCTAATGGCGAAGGTGTTGGAGCATCCCTCTCAAGTGATTGTTTGGGTCAACAAAGTGTTTGGAGAGCAATTTCTAACGTAATCTTCATTTGGCCACTGTCACTCAAGATGGGAAGAGTCTTTGCTTGTAGGTTGAAAGCTCCAATTCTTCAAAAATTGTGA

Protein sequence

MLQDPSSNASSSYVMYHPQSGQCAQVSNDNTGIFLSNCSTSSQWSHGDDGTPIKRRTNGLCLKANGEGVGASLSSDCLGQQSVWRAISNVIFIWPLSLKMGRVFACRLKAPILQKL

Homology

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BLAST of Cla97C06G113530.1 vs. NCBI nr
Match: XP_022158418.1 (uncharacterized protein LOC111024912, partial [Momordica charantia])

HSP 1 Score: 150.6 bits (379), Expect = 3.3e-33
Identity = 73/89 (82.02%), Postives = 77/89 (86.52%), Query Frame = 0


Query: 1   MLQDPSSNASSSYVMYHPQSGQCAQVSNDNTGIFLSNCSTSSQWSHGDDGTPIKRRTNGL 60
           MLQDP+SNASSSYVMYHPQSGQC   SNDN GIFLS+CSTSS+WSHG DGT IK  T GL
Sbjct: 101 MLQDPTSNASSSYVMYHPQSGQCILASNDNKGIFLSSCSTSSRWSHGGDGTSIKITTTGL 160

Query: 61  CLKANGEGVGASLSSDCLGQQSVWRAISN 90
           CLKANGEG+  SLSSDCL QQSVWRAISN
Sbjct: 161 CLKANGEGLRVSLSSDCLSQQSVWRAISN 189

[Close]

BLAST of Cla97C06G113530.1 vs. NCBI nr
Match: XP_022157219.1 (uncharacterized protein LOC111023982 [Momordica charantia])

HSP 1 Score: 147.1 bits (370), Expect = 3.6e-32
Identity = 70/89 (78.65%), Postives = 75/89 (84.27%), Query Frame = 0


Query: 1   MLQDPSSNASSSYVMYHPQSGQCAQVSNDNTGIFLSNCSTSSQWSHGDDGTPIKRRTNGL 60
           MLQDP+SNASSSYVMYHPQSGQC   SNDN  +FLSNC TSS+WSHG DGTPIK  T GL
Sbjct: 335 MLQDPNSNASSSYVMYHPQSGQCVLSSNDNREMFLSNCXTSSRWSHGGDGTPIKMTTTGL 394

Query: 61  CLKANGEGVGASLSSDCLGQQSVWRAISN 90
           C+KANGE +G SLSSDCLGQ S WRAISN
Sbjct: 395 CVKANGESLGXSLSSDCLGQLSAWRAISN 423

[Close]

BLAST of Cla97C06G113530.1 vs. NCBI nr
Match: XP_022958844.1 (uncharacterized protein LOC111459997 [Cucurbita moschata])

HSP 1 Score: 147.1 bits (370), Expect = 3.6e-32
Identity = 69/89 (77.53%), Postives = 77/89 (86.52%), Query Frame = 0


Query: 1   MLQDPSSNASSSYVMYHPQSGQCAQVSNDNTGIFLSNCSTSSQWSHGDDGTPIKRRTNGL 60
           MLQDP+SNAS SY++YHPQSGQCAQ SN++T IFLS+CSTSS+WSHGD G  IK  T GL
Sbjct: 391 MLQDPNSNASFSYILYHPQSGQCAQTSNNDTQIFLSDCSTSSRWSHGDGGNSIKMATTGL 450

Query: 61  CLKANGEGVGASLSSDCLGQQSVWRAISN 90
           CLKANGEG+G SLSSDCL QQSVWR ISN
Sbjct: 451 CLKANGEGLGVSLSSDCLSQQSVWRTISN 479

[Close]

BLAST of Cla97C06G113530.1 vs. NCBI nr
Match: XP_008445780.1 (PREDICTED: major extracellular endoglucanase-like [Cucumis melo])

HSP 1 Score: 143.3 bits (360), Expect = 5.2e-31
Identity = 67/89 (75.28%), Postives = 77/89 (86.52%), Query Frame = 0


Query: 1   MLQDPSSNASSSYVMYHPQSGQCAQVSNDNTGIFLSNCSTSSQWSHGDDGTPIKRRTNGL 60
           MLQDP+SNAS SYV+YHPQSGQC +VSNDN  IFL+NCSTSS+WSH +D TPIK    GL
Sbjct: 302 MLQDPNSNASFSYVIYHPQSGQCIEVSNDNKDIFLTNCSTSSRWSHDNDSTPIKMSNTGL 361

Query: 61  CLKANGEGVGASLSSDCLGQQSVWRAISN 90
           CLKA+GEG+ ASLS+DCLG+QSVW AISN
Sbjct: 362 CLKASGEGLAASLSNDCLGKQSVWSAISN 390

[Close]

BLAST of Cla97C06G113530.1 vs. NCBI nr
Match: XP_011658389.1 (PREDICTED: uncharacterized protein LOC101207450 [Cucumis sativus] >KGN45940.1 hypothetical protein Csa_6G028440 [Cucumis sativus])

HSP 1 Score: 136.0 bits (341), Expect = 8.4e-29
Identity = 64/89 (71.91%), Postives = 76/89 (85.39%), Query Frame = 0


Query: 1   MLQDPSSNASSSYVMYHPQSGQCAQVSNDNTGIFLSNCSTSSQWSHGDDGTPIKRRTNGL 60
           MLQDP SNAS SYV+YH QSGQC +VSNDN  IFL+NCSTSS+WSH +D TPIK  + GL
Sbjct: 391 MLQDPYSNASFSYVIYHVQSGQCIEVSNDNKEIFLTNCSTSSRWSHDNDSTPIKMSSTGL 450

Query: 61  CLKANGEGVGASLSSDCLGQQSVWRAISN 90
           CLKA+GEG+ ASLS+DC+G+QS+W AISN
Sbjct: 451 CLKASGEGLEASLSTDCIGKQSLWSAISN 479

[Close]

BLAST of Cla97C06G113530.1 vs. TrEMBL
Match: tr|A0A1S3BDI2|A0A1S3BDI2_CUCME (major extracellular endoglucanase-like OS=Cucumis melo OX=3656 GN=LOC103488703 PE=3 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 3.5e-31
Identity = 67/89 (75.28%), Postives = 77/89 (86.52%), Query Frame = 0


Query: 1   MLQDPSSNASSSYVMYHPQSGQCAQVSNDNTGIFLSNCSTSSQWSHGDDGTPIKRRTNGL 60
           MLQDP+SNAS SYV+YHPQSGQC +VSNDN  IFL+NCSTSS+WSH +D TPIK    GL
Sbjct: 302 MLQDPNSNASFSYVIYHPQSGQCIEVSNDNKDIFLTNCSTSSRWSHDNDSTPIKMSNTGL 361

Query: 61  CLKANGEGVGASLSSDCLGQQSVWRAISN 90
           CLKA+GEG+ ASLS+DCLG+QSVW AISN
Sbjct: 362 CLKASGEGLAASLSNDCLGKQSVWSAISN 390

[Close]

BLAST of Cla97C06G113530.1 vs. TrEMBL
Match: tr|A0A0A0K853|A0A0A0K853_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G028440 PE=3 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 5.5e-29
Identity = 64/89 (71.91%), Postives = 76/89 (85.39%), Query Frame = 0


Query: 1   MLQDPSSNASSSYVMYHPQSGQCAQVSNDNTGIFLSNCSTSSQWSHGDDGTPIKRRTNGL 60
           MLQDP SNAS SYV+YH QSGQC +VSNDN  IFL+NCSTSS+WSH +D TPIK  + GL
Sbjct: 391 MLQDPYSNASFSYVIYHVQSGQCIEVSNDNKEIFLTNCSTSSRWSHDNDSTPIKMSSTGL 450

Query: 61  CLKANGEGVGASLSSDCLGQQSVWRAISN 90
           CLKA+GEG+ ASLS+DC+G+QS+W AISN
Sbjct: 451 CLKASGEGLEASLSTDCIGKQSLWSAISN 479

[Close]

BLAST of Cla97C06G113530.1 vs. TrEMBL
Match: tr|A0A0A0L644|A0A0A0L644_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G186670 PE=4 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 3.0e-27
Identity = 63/89 (70.79%), Postives = 74/89 (83.15%), Query Frame = 0


Query: 1   MLQDPSSNASSSYVMYHPQSGQCAQVSNDNTGIFLSNCSTSSQWSHGDDGTPIKRRTNGL 60
           MLQDP+SNAS SYV+YHPQS QC QVSNDN  IFL+NCST ++WSH +DGTPI+  + GL
Sbjct: 202 MLQDPNSNASFSYVIYHPQSSQCIQVSNDNKEIFLTNCSTPTRWSHNNDGTPIEMSSTGL 261

Query: 61  CLKANGEGVGASLSSDCLGQQSVWRAISN 90
            LKA+G+G+ ASLSSD L QQSVW AISN
Sbjct: 262 YLKASGKGLEASLSSDTLSQQSVWSAISN 290

[Close]

BLAST of Cla97C06G113530.1 vs. TrEMBL
Match: tr|A0A1S3CTF8|A0A1S3CTF8_CUCME (major extracellular endoglucanase-like OS=Cucumis melo OX=3656 GN=LOC103504686 PE=3 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 5.0e-22
Identity = 54/90 (60.00%), Postives = 67/90 (74.44%), Query Frame = 0


Query: 1   MLQDPSSNASSSYVMYHPQSGQCAQVSN-DNTGIFLSNCSTSSQWSHGDDGTPIKRRTNG 60
           MLQDP+SN+S++Y+MYHPQSGQC QV +     IFL+NCS +S WS+  DGTPI   +  
Sbjct: 391 MLQDPNSNSSNTYLMYHPQSGQCVQVHDMKQKEIFLNNCSNASHWSYEGDGTPIMLASTN 450

Query: 61  LCLKANGEGVGASLSSDCLGQQSVWRAISN 90
            CLKANG G+  SLS DC G+QSVW AIS+
Sbjct: 451 FCLKANGNGLPPSLSRDCFGEQSVWTAISD 480

[Close]

BLAST of Cla97C06G113530.1 vs. TrEMBL
Match: tr|A0A0A0KKZ0|A0A0A0KKZ0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G168960 PE=3 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 1.6e-20
Identity = 51/90 (56.67%), Postives = 68/90 (75.56%), Query Frame = 0


Query: 1   MLQDPSSNASSSYVMYHPQSGQCAQVSN-DNTGIFLSNCSTSSQWSHGDDGTPIKRRTNG 60
           MLQDP+SN+S++YVMYHPQSGQC  V +  +  I+L++CS +S WS+  DGTPI   +  
Sbjct: 195 MLQDPNSNSSNTYVMYHPQSGQCVLVQDMKHMQIYLNDCSNASHWSYEGDGTPIMLASTN 254

Query: 61  LCLKANGEGVGASLSSDCLGQQSVWRAISN 90
            CLKA+G+G+  SLS DC G+QSVW AIS+
Sbjct: 255 FCLKASGDGLPPSLSRDCFGEQSVWTAISD 284

The following BLAST results are available for this feature:

BLAST of Cla97C06G113530.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022158418.1	3.3e-33	82.02	uncharacterized protein LOC111024912, partial [Momordica charantia]	[more]
XP_022157219.1	3.6e-32	78.65	uncharacterized protein LOC111023982 [Momordica charantia]	[more]
XP_022958844.1	3.6e-32	77.53	uncharacterized protein LOC111459997 [Cucurbita moschata]	[more]
XP_008445780.1	5.2e-31	75.28	PREDICTED: major extracellular endoglucanase-like [Cucumis melo]	[more]
XP_011658389.1	8.4e-29	71.91	PREDICTED: uncharacterized protein LOC101207450 [Cucumis sativus] >KGN45940.1 hy...	[more]

BLAST of Cla97C06G113530.1 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BDI2\|A0A1S3BDI2_CUCME	3.5e-31	75.28	major extracellular endoglucanase-like OS=Cucumis melo OX=3656 GN=LOC103488703 P...	[more]
tr\|A0A0A0K853\|A0A0A0K853_CUCSA	5.5e-29	71.91	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G028440 PE=3 SV=1	[more]
tr\|A0A0A0L644\|A0A0A0L644_CUCSA	3.0e-27	70.79	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G186670 PE=4 SV=1	[more]
tr\|A0A1S3CTF8\|A0A1S3CTF8_CUCME	5.0e-22	60.00	major extracellular endoglucanase-like OS=Cucumis melo OX=3656 GN=LOC103504686 P...	[more]
tr\|A0A0A0KKZ0\|A0A0A0KKZ0_CUCSA	1.6e-20	56.67	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G168960 PE=3 SV=1	[more]

BLAST of Cla97C06G113530.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Cla97C06G113530.1 vs. TAIR10


Match Name	E-value	Identity	Description

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR035992	Ricin_B-like_lectins

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0005975	carbohydrate metabolic process
biological_process	GO:0008152	metabolic process
molecular_function	GO:0016787	hydrolase activity
molecular_function	GO:0016798	hydrolase activity, acting on glycosyl bonds
molecular_function	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cla97C06G113530	Cla97C06G113530	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cla97C06G113530.1.exon.1	Cla97C06G113530.1.exon.1	exon
Cla97C06G113530.1.exon.2	Cla97C06G113530.1.exon.2	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cla97C06G113530.1.CDS.1	Cla97C06G113530.1.CDS.1	CDS
Cla97C06G113530.1.CDS.2	Cla97C06G113530.1.CDS.2	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cla97C06G113530.1	Cla97C06G113530.1-protein	polypeptide

InterPro

Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	G3DSA:2.80.10.50		coord: 4..90 e-value: 1.5E-6 score: 30.1
None	No IPR available	PANTHER	PTHR31263	FAMILY NOT NAMED	coord: 1..89
None	No IPR available	PANTHER	PTHR31263:SF10	SUBFAMILY NOT NAMED	coord: 1..89
IPR035992	Ricin B-like lectins	SUPERFAMILY	SSF50370	Ricin B-like lectins	coord: 10..73