Cla97C06G110510.1 (mRNA) Watermelon (97103) v2
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAGAAGCTCCCACCTATCCTGAGAAAGCTTCAAACCCCTCAATCAATATCCCCATCTCCATTACCTGATGCAATTTTGCCCCCTTCTCCTCAAACCCCTCTGCCCCCTCTTCTCAATTTCTCCCTCTCTTCCCCCCATCATTACACTCAACTCCTCCATTTCCTCAAAACCCACCTCACGCTTCCCTTCACGCCTAATAATCTCCTCCATTTCCTCAAATCCAAGCTTCATTTTCACCCCAAATTCACTCACTACGATTTCCATATCTTCAATTGGGCTTCAACCATCGATTCCTTCCGCCACGATCACTCTACCTTTGCATGGATGGCCAGGACCCTTGCAACCACAGATCGTTTCACTGAGCTCAAATCCCTTCTAAAGTTCTTGGCCTCCTCTCCTTGCCCCTGCTCTGATGGTATTTTCTCTTGCCCTCAGACAGAATCCATTTTTCAATTTTCCATTAGTGCCTATTGTAGAGCTAGGAAATTTGATGAGGCTGTTTTTGCTTTTGACACCATGAGAAAAATGATTGATGGGAGGCCAAGTGTCGTCGTCTATAATGTTTTGATTAATGGGTTTGTGAAGTCTGGTAGATTTGACAAGGCTTTCGGCTTTTATGATAGGATGCTTAGTGATCGGGTTAAGCCTGATGTGTACACTTTTAACATTTTGATTAGCGGGTATTGTCGCAATTCACAGTTTGCACTGGCTTTAGAGTTATTTAAGGAGATGAGGGAAAAGGGTTGTAGCCCAAATGTGATCAGTTTCAATACACTGATTAAAGGGTTCTTCAGGGAAGGAAAGTTTGAGGATGGGATTGCTCTGGCTTATGAGATGATTGAACTGGGATGCAAGTTCTCTAGTGTCACCTGTGAAATTGTAATGGATGGGCTCAGTAGAGAAGGCAAGGTTTGTGAGGCATGTGAAATTTTGATTGATTTTTCGAGGAAGCAAGTATTGCCCAAGGATTATGATTACTTTGGAGTTATTGAAATGCTTTGTGGGAAAGGGAATGCAGGCAAAGCTATGGAAGTTGTGTACGAGCTATGGATGGAAGGAAATGTTCCCAGCTTCATTACTTCCACCACTTTGATAGATGGACTGAGGAAAGAAGGGAGATTGAATGATGCAATGAATGTAACAGAGAGGATGCTTAAAGTAGGTACGGTTCCTGACAGTGTGACTTTGAACTCTCTTCTCCAAGATCTATGCAATGTGAGGAAAACTGTGGAAGCTAATAAGTTGAGATTATTGGCTTCAAGCAAGGGGTTTGAACCAGACAACAAAACATATTACACTTTAGTTTCTGGTTACACCATGGAAGGCAACAAGGTGGAAGGGCAAAGGCTTGTGGAGGAGATGTTGGATAAGGAGTTTCTACCTGATATTGCAACATATAATAGGATAATGGATCGGTTGTCGAATACATGTAAGAAAAGATCATACTGTCACATCCATTCGAGTTCAAAGTTGGTAACATAA ATGAAGAAGCTCCCACCTATCCTGAGAAAGCTTCAAACCCCTCAATCAATATCCCCATCTCCATTACCTGATGCAATTTTGCCCCCTTCTCCTCAAACCCCTCTGCCCCCTCTTCTCAATTTCTCCCTCTCTTCCCCCCATCATTACACTCAACTCCTCCATTTCCTCAAAACCCACCTCACGCTTCCCTTCACGCCTAATAATCTCCTCCATTTCCTCAAATCCAAGCTTCATTTTCACCCCAAATTCACTCACTACGATTTCCATATCTTCAATTGGGCTTCAACCATCGATTCCTTCCGCCACGATCACTCTACCTTTGCATGGATGGCCAGGACCCTTGCAACCACAGATCGTTTCACTGAGCTCAAATCCCTTCTAAAGTTCTTGGCCTCCTCTCCTTGCCCCTGCTCTGATGGTATTTTCTCTTGCCCTCAGACAGAATCCATTTTTCAATTTTCCATTAGTGCCTATTGTAGAGCTAGGAAATTTGATGAGGCTGTTTTTGCTTTTGACACCATGAGAAAAATGATTGATGGGAGGCCAAGTGTCGTCGTCTATAATGTTTTGATTAATGGGTTTGTGAAGTCTGGTAGATTTGACAAGGCTTTCGGCTTTTATGATAGGATGCTTAGTGATCGGGTTAAGCCTGATGTGTACACTTTTAACATTTTGATTAGCGGGTATTGTCGCAATTCACAGTTTGCACTGGCTTTAGAGTTATTTAAGGAGATGAGGGAAAAGGGTTGTAGCCCAAATGTGATCAGTTTCAATACACTGATTAAAGGGTTCTTCAGGGAAGGAAAGTTTGAGGATGGGATTGCTCTGGCTTATGAGATGATTGAACTGGGATGCAAGTTCTCTAGTGTCACCTGTGAAATTGTAATGGATGGGCTCAGTAGAGAAGGCAAGGTTTGTGAGGCATGTGAAATTTTGATTGATTTTTCGAGGAAGCAAGTATTGCCCAAGGATTATGATTACTTTGGAGTTATTGAAATGCTTTGTGGGAAAGGGAATGCAGGCAAAGCTATGGAAGTTGTGTACGAGCTATGGATGGAAGGAAATGTTCCCAGCTTCATTACTTCCACCACTTTGATAGATGGACTGAGGAAAGAAGGGAGATTGAATGATGCAATGAATGTAACAGAGAGGATGCTTAAAGTAGGTACGGTTCCTGACAGTGTGACTTTGAACTCTCTTCTCCAAGATCTATGCAATGTGAGGAAAACTGTGGAAGCTAATAAGTTGAGATTATTGGCTTCAAGCAAGGGGTTTGAACCAGACAACAAAACATATTACACTTTAGTTTCTGGTTACACCATGGAAGGCAACAAGGTGGAAGGGCAAAGGCTTGTGGAGGAGATGTTGGATAAGGAGTTTCTACCTGATATTGCAACATATAATAGGATAATGGATCGGTTGTCGAATACATGTAAGAAAAGATCATACTGTCACATCCATTCGAGTTCAAAGTTGGTAACATAA ATGAAGAAGCTCCCACCTATCCTGAGAAAGCTTCAAACCCCTCAATCAATATCCCCATCTCCATTACCTGATGCAATTTTGCCCCCTTCTCCTCAAACCCCTCTGCCCCCTCTTCTCAATTTCTCCCTCTCTTCCCCCCATCATTACACTCAACTCCTCCATTTCCTCAAAACCCACCTCACGCTTCCCTTCACGCCTAATAATCTCCTCCATTTCCTCAAATCCAAGCTTCATTTTCACCCCAAATTCACTCACTACGATTTCCATATCTTCAATTGGGCTTCAACCATCGATTCCTTCCGCCACGATCACTCTACCTTTGCATGGATGGCCAGGACCCTTGCAACCACAGATCGTTTCACTGAGCTCAAATCCCTTCTAAAGTTCTTGGCCTCCTCTCCTTGCCCCTGCTCTGATGGTATTTTCTCTTGCCCTCAGACAGAATCCATTTTTCAATTTTCCATTAGTGCCTATTGTAGAGCTAGGAAATTTGATGAGGCTGTTTTTGCTTTTGACACCATGAGAAAAATGATTGATGGGAGGCCAAGTGTCGTCGTCTATAATGTTTTGATTAATGGGTTTGTGAAGTCTGGTAGATTTGACAAGGCTTTCGGCTTTTATGATAGGATGCTTAGTGATCGGGTTAAGCCTGATGTGTACACTTTTAACATTTTGATTAGCGGGTATTGTCGCAATTCACAGTTTGCACTGGCTTTAGAGTTATTTAAGGAGATGAGGGAAAAGGGTTGTAGCCCAAATGTGATCAGTTTCAATACACTGATTAAAGGGTTCTTCAGGGAAGGAAAGTTTGAGGATGGGATTGCTCTGGCTTATGAGATGATTGAACTGGGATGCAAGTTCTCTAGTGTCACCTGTGAAATTGTAATGGATGGGCTCAGTAGAGAAGGCAAGGTTTGTGAGGCATGTGAAATTTTGATTGATTTTTCGAGGAAGCAAGTATTGCCCAAGGATTATGATTACTTTGGAGTTATTGAAATGCTTTGTGGGAAAGGGAATGCAGGCAAAGCTATGGAAGTTGTGTACGAGCTATGGATGGAAGGAAATGTTCCCAGCTTCATTACTTCCACCACTTTGATAGATGGACTGAGGAAAGAAGGGAGATTGAATGATGCAATGAATGTAACAGAGAGGATGCTTAAAGTAGGTACGGTTCCTGACAGTGTGACTTTGAACTCTCTTCTCCAAGATCTATGCAATGTGAGGAAAACTGTGGAAGCTAATAAGTTGAGATTATTGGCTTCAAGCAAGGGGTTTGAACCAGACAACAAAACATATTACACTTTAGTTTCTGGTTACACCATGGAAGGCAACAAGGTGGAAGGGCAAAGGCTTGTGGAGGAGATGTTGGATAAGGAGTTTCTACCTGATATTGCAACATATAATAGGATAATGGATCGGTTGTCGAATACATGTAAGAAAAGATCATACTGTCACATCCATTCGAGTTCAAAGTTGGTAACATAA MKKLPPILRKLQTPQSISPSPLPDAILPPSPQTPLPPLLNFSLSSPHHYTQLLHFLKTHLTLPFTPNNLLHFLKSKLHFHPKFTHYDFHIFNWASTIDSFRHDHSTFAWMARTLATTDRFTELKSLLKFLASSPCPCSDGIFSCPQTESIFQFSISAYCRARKFDEAVFAFDTMRKMIDGRPSVVVYNVLINGFVKSGRFDKAFGFYDRMLSDRVKPDVYTFNILISGYCRNSQFALALELFKEMREKGCSPNVISFNTLIKGFFREGKFEDGIALAYEMIELGCKFSSVTCEIVMDGLSREGKVCEACEILIDFSRKQVLPKDYDYFGVIEMLCGKGNAGKAMEVVYELWMEGNVPSFITSTTLIDGLRKEGRLNDAMNVTERMLKVGTVPDSVTLNSLLQDLCNVRKTVEANKLRLLASSKGFEPDNKTYYTLVSGYTMEGNKVEGQRLVEEMLDKEFLPDIATYNRIMDRLSNTCKKRSYCHIHSSSKLVT
BLAST of Cla97C06G110510.1 vs. NCBI nr
Match: XP_004140672.1 (PREDICTED: pentatricopeptide repeat-containing protein At2g36240 [Cucumis sativus] >XP_011656750.1 PREDICTED: pentatricopeptide repeat-containing protein At2g36240 [Cucumis sativus]) HSP 1 Score: 296.2 bits (757), Expect = 2.1e-76 Identity = 172/215 (80.00%), Postives = 178/215 (82.79%), Query Frame = 0
BLAST of Cla97C06G110510.1 vs. NCBI nr
Match: XP_008459992.1 (PREDICTED: pentatricopeptide repeat-containing protein At2g36240 [Cucumis melo] >XP_008459993.1 PREDICTED: pentatricopeptide repeat-containing protein At2g36240 [Cucumis melo]) HSP 1 Score: 293.1 bits (749), Expect = 1.7e-75 Identity = 170/215 (79.07%), Postives = 178/215 (82.79%), Query Frame = 0
BLAST of Cla97C06G110510.1 vs. NCBI nr
Match: XP_022977415.1 (pentatricopeptide repeat-containing protein At2g36240 [Cucurbita maxima]) HSP 1 Score: 288.9 bits (738), Expect = 3.3e-74 Identity = 164/215 (76.28%), Postives = 176/215 (81.86%), Query Frame = 0
BLAST of Cla97C06G110510.1 vs. NCBI nr
Match: XP_023543149.1 (pentatricopeptide repeat-containing protein At2g36240 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 287.3 bits (734), Expect = 9.6e-74 Identity = 165/215 (76.74%), Postives = 177/215 (82.33%), Query Frame = 0
BLAST of Cla97C06G110510.1 vs. NCBI nr
Match: XP_022925788.1 (pentatricopeptide repeat-containing protein At2g36240 [Cucurbita moschata]) HSP 1 Score: 285.0 bits (728), Expect = 4.8e-73 Identity = 165/215 (76.74%), Postives = 177/215 (82.33%), Query Frame = 0
BLAST of Cla97C06G110510.1 vs. TrEMBL
Match: tr|A0A1S3CB10|A0A1S3CB10_CUCME (pentatricopeptide repeat-containing protein At2g36240 OS=Cucumis melo OX=3656 GN=LOC103498941 PE=4 SV=1) HSP 1 Score: 293.1 bits (749), Expect = 1.2e-75 Identity = 170/215 (79.07%), Postives = 178/215 (82.79%), Query Frame = 0
BLAST of Cla97C06G110510.1 vs. TrEMBL
Match: tr|A0A251N9Z7|A0A251N9Z7_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_7G109800 PE=4 SV=1) HSP 1 Score: 226.9 bits (577), Expect = 1.0e-55 Identity = 102/138 (73.91%), Postives = 119/138 (86.23%), Query Frame = 0
BLAST of Cla97C06G110510.1 vs. TrEMBL
Match: tr|A0A2P6RBY5|A0A2P6RBY5_ROSCH (Putative pentatricopeptide OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr3g0473791 PE=4 SV=1) HSP 1 Score: 216.9 bits (551), Expect = 1.1e-52 Identity = 97/138 (70.29%), Postives = 116/138 (84.06%), Query Frame = 0
BLAST of Cla97C06G110510.1 vs. TrEMBL
Match: tr|A0A2P5B0Y1|A0A2P5B0Y1_PARAD (Tetratricopeptide-like helical domain containing protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_281740 PE=4 SV=1) HSP 1 Score: 216.1 bits (549), Expect = 1.8e-52 Identity = 94/137 (68.61%), Postives = 118/137 (86.13%), Query Frame = 0
BLAST of Cla97C06G110510.1 vs. TrEMBL
Match: tr|A0A061F174|A0A061F174_THECC (Pentatricopeptide (PPR) repeat-containing protein, putative OS=Theobroma cacao OX=3641 GN=TCM_022597 PE=4 SV=1) HSP 1 Score: 214.9 bits (546), Expect = 4.0e-52 Identity = 94/138 (68.12%), Postives = 120/138 (86.96%), Query Frame = 0
BLAST of Cla97C06G110510.1 vs. Swiss-Prot
Match: sp|Q9SJN2|PP187_ARATH (Pentatricopeptide repeat-containing protein At2g36240 OS=Arabidopsis thaliana OX=3702 GN=At2g36240 PE=2 SV=1) HSP 1 Score: 188.3 bits (477), Expect = 2.0e-46 Identity = 82/135 (60.74%), Postives = 107/135 (79.26%), Query Frame = 0
BLAST of Cla97C06G110510.1 vs. TAIR10
Match: AT2G36240.1 (pentatricopeptide (PPR) repeat-containing protein) HSP 1 Score: 188.3 bits (477), Expect = 1.1e-47 Identity = 82/135 (60.74%), Postives = 107/135 (79.26%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12
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