Cla97C05G086470.1 (mRNA) Watermelon (97103) v2

NameCla97C05G086470.1
TypemRNA
OrganismCitrullus lanatus (Watermelon (97103) v2)
DescriptionUnknown protein
LocationCla97Chr05 : 4824675 .. 4825831 (+)
Sequence length726
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATCTGTGTCTCGCACTCTTCGTGTAAGTACGCTAACCCTCTGGCTATTCCCTTTGCGATTTCTACTCTTTGTGTCCAATTACAATTAGGGTTTTCGCCATTGTTGAAGAGGATTCTCGATAGTGCTCCATTGGGCATTAGCTCGTACACTAGAAGAAGTTGCTTCTTGTTTTCGACGCAGTAACCTAACAATCTGACCAAATTTTTGTGATATGTTCGGCCGATGATTCTTAGCTCCGTTACGAACTCTGTCTCGGTTCTTTCAGTCATTTTGTCGAGCACTTTTACTGCAATTTCCACATCGACACCGTCTATGTGTAAATTCCCACGAACTACTTTACCAGAGCTTCCCTGGCCAAGGATCTTGTTGAATCCATCGGTTGCCTCAACCAATTCCTGGAAAGTGAATTCTCGGAAATTGATTCCGATGGCACTCGCACTCGAAAATTTCTTCTTCCTAATCAATCTTCGAGCCGTTGGATGATAAAAAACGACAACGGCACCGAAGCAAAAAGCCAAAACTCCGACGATTATATTGCCAATCTCCAGGACTTTCCGGTAATTAAATTTGTTTTCGTCTTTGTCGTCATGAATTTCTGAACTGCTTTTAACAAAGGCACTCTGATTAGAGTTTTTGTTCCTTTGGTAATATTAGTGTTTCTACCATTCATCAATGGCTCTTCTTGCGACATGTCGAATCCTTCCAAGTTGCAGCCATAACATAACAATCTTCCATGATTGTTTTTTTGTAGGCCTCAAAATCGACATTTAACGTACGAGCCAAATCTGAGAAAGGCTCTGATTCAGGTGGCAAGTCAATATCCACATCGTCGATCACCTGGAGGGTGAAATTCTTCCCGGAATCTCCCATACAGTAATTGATTACAGTTTCCGGTCGACAGCCTTTCCAAGCATCCGCCGGATCCAAATGAACAAAACCCGGCAAGCAATCGCAGGTTACTGTGTCATTGTCGGGTGATATGCAGAGTCCATTTAAGCCGCAAACATTGTTCACAAGGCAAGGGTCTCTCATGGCTCCCCAAACCTTTATCCATTCACTGCCATTACTTTTCGGGTAAACATATTGCCAGAAATCGCCATGGACATTTAATGTTGCTCTGTGGTAGTAATCTCCAACTGGGGCTGGAACATTGA

mRNA sequence

ATGATCTGTGTCTCGCACTCTTCGTGTAAGTACGCTAACCCTCTGGCTATTCCCTTTGCGATTTCTACTCTTTGTGTCCAATTACAATTAGGGTTTTCGCCATTGTTGAAGAGGATTCTCGATAGTGCTCCATTGGGCATTAGCTCGTACACTAGAAGAAGTTGCTTCTTGTTTTCGACGCAAGCTTCCCTGGCCAAGGATCTTGTTGAATCCATCGGTTGCCTCAACCAATTCCTGGAAAGTGAATTCTCGGAAATTGATTCCGATGGCACTCGCACTCGAAAATTTCTTCTTCCTAATCAATCTTCGAGCCGTTGGATGATAAAAAACGACAACGGCACCGAAGCAAAAAGCCAAAACTCCGACGATTATATTGCCAATCTCCAGGACTTTCCGGCCTCAAAATCGACATTTAACGTACGAGCCAAATCTGAGAAAGGCTCTGATTCAGGTGGCAAGTCAATATCCACATCGTCGATCACCTGGAGGTTTCCGGTCGACAGCCTTTCCAAGCATCCGCCGGATCCAAATGAACAAAACCCGGCAAGCAATCGCAGAGTCCATTTAAGCCGCAAACATTGTTCACAAGGCAAGGGTCTCTCATGGCTCCCCAAACCTTTATCCATTCACTGCCATTACTTTTCGGGTAAACATATTGCCAGAAATCGCCATGGACATTTAATGTTGCTCTGTGGTAGTAATCTCCAACTGGGGCTGGAACATTGA

Coding sequence (CDS)

ATGATCTGTGTCTCGCACTCTTCGTGTAAGTACGCTAACCCTCTGGCTATTCCCTTTGCGATTTCTACTCTTTGTGTCCAATTACAATTAGGGTTTTCGCCATTGTTGAAGAGGATTCTCGATAGTGCTCCATTGGGCATTAGCTCGTACACTAGAAGAAGTTGCTTCTTGTTTTCGACGCAAGCTTCCCTGGCCAAGGATCTTGTTGAATCCATCGGTTGCCTCAACCAATTCCTGGAAAGTGAATTCTCGGAAATTGATTCCGATGGCACTCGCACTCGAAAATTTCTTCTTCCTAATCAATCTTCGAGCCGTTGGATGATAAAAAACGACAACGGCACCGAAGCAAAAAGCCAAAACTCCGACGATTATATTGCCAATCTCCAGGACTTTCCGGCCTCAAAATCGACATTTAACGTACGAGCCAAATCTGAGAAAGGCTCTGATTCAGGTGGCAAGTCAATATCCACATCGTCGATCACCTGGAGGTTTCCGGTCGACAGCCTTTCCAAGCATCCGCCGGATCCAAATGAACAAAACCCGGCAAGCAATCGCAGAGTCCATTTAAGCCGCAAACATTGTTCACAAGGCAAGGGTCTCTCATGGCTCCCCAAACCTTTATCCATTCACTGCCATTACTTTTCGGGTAAACATATTGCCAGAAATCGCCATGGACATTTAATGTTGCTCTGTGGTAGTAATCTCCAACTGGGGCTGGAACATTGA

Protein sequence

MICVSHSSCKYANPLAIPFAISTLCVQLQLGFSPLLKRILDSAPLGISSYTRRSCFLFSTQASLAKDLVESIGCLNQFLESEFSEIDSDGTRTRKFLLPNQSSSRWMIKNDNGTEAKSQNSDDYIANLQDFPASKSTFNVRAKSEKGSDSGGKSISTSSITWRFPVDSLSKHPPDPNEQNPASNRRVHLSRKHCSQGKGLSWLPKPLSIHCHYFSGKHIARNRHGHLMLLCGSNLQLGLEH
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Cla97C05G086470Cla97C05G086470gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Cla97C05G086470.1Cla97C05G086470.1-proteinpolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cla97C05G086470.1.exon.1Cla97C05G086470.1.exon.1exon
Cla97C05G086470.1.exon.2Cla97C05G086470.1.exon.2exon
Cla97C05G086470.1.exon.3Cla97C05G086470.1.exon.3exon
Cla97C05G086470.1.exon.4Cla97C05G086470.1.exon.4exon
Cla97C05G086470.1.exon.5Cla97C05G086470.1.exon.5exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cla97C05G086470.1.CDS.1Cla97C05G086470.1.CDS.1CDS
Cla97C05G086470.1.CDS.2Cla97C05G086470.1.CDS.2CDS
Cla97C05G086470.1.CDS.3Cla97C05G086470.1.CDS.3CDS
Cla97C05G086470.1.CDS.4Cla97C05G086470.1.CDS.4CDS
Cla97C05G086470.1.CDS.5Cla97C05G086470.1.CDS.5CDS


Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 165..191