Cla97C05G086470 (gene) Watermelon (97103) v2

NameCla97C05G086470
Typegene
OrganismCitrullus lanatus (Watermelon (97103) v2)
DescriptionUnknown protein
LocationCla97Chr05 : 4824675 .. 4825831 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATCTGTGTCTCGCACTCTTCGTGTAAGTACGCTAACCCTCTGGCTATTCCCTTTGCGATTTCTACTCTTTGTGTCCAATTACAATTAGGGTTTTCGCCATTGTTGAAGAGGATTCTCGATAGTGCTCCATTGGGCATTAGCTCGTACACTAGAAGAAGTTGCTTCTTGTTTTCGACGCAGTAACCTAACAATCTGACCAAATTTTTGTGATATGTTCGGCCGATGATTCTTAGCTCCGTTACGAACTCTGTCTCGGTTCTTTCAGTCATTTTGTCGAGCACTTTTACTGCAATTTCCACATCGACACCGTCTATGTGTAAATTCCCACGAACTACTTTACCAGAGCTTCCCTGGCCAAGGATCTTGTTGAATCCATCGGTTGCCTCAACCAATTCCTGGAAAGTGAATTCTCGGAAATTGATTCCGATGGCACTCGCACTCGAAAATTTCTTCTTCCTAATCAATCTTCGAGCCGTTGGATGATAAAAAACGACAACGGCACCGAAGCAAAAAGCCAAAACTCCGACGATTATATTGCCAATCTCCAGGACTTTCCGGTAATTAAATTTGTTTTCGTCTTTGTCGTCATGAATTTCTGAACTGCTTTTAACAAAGGCACTCTGATTAGAGTTTTTGTTCCTTTGGTAATATTAGTGTTTCTACCATTCATCAATGGCTCTTCTTGCGACATGTCGAATCCTTCCAAGTTGCAGCCATAACATAACAATCTTCCATGATTGTTTTTTTGTAGGCCTCAAAATCGACATTTAACGTACGAGCCAAATCTGAGAAAGGCTCTGATTCAGGTGGCAAGTCAATATCCACATCGTCGATCACCTGGAGGGTGAAATTCTTCCCGGAATCTCCCATACAGTAATTGATTACAGTTTCCGGTCGACAGCCTTTCCAAGCATCCGCCGGATCCAAATGAACAAAACCCGGCAAGCAATCGCAGGTTACTGTGTCATTGTCGGGTGATATGCAGAGTCCATTTAAGCCGCAAACATTGTTCACAAGGCAAGGGTCTCTCATGGCTCCCCAAACCTTTATCCATTCACTGCCATTACTTTTCGGGTAAACATATTGCCAGAAATCGCCATGGACATTTAATGTTGCTCTGTGGTAGTAATCTCCAACTGGGGCTGGAACATTGA

mRNA sequence

ATGATCTGTGTCTCGCACTCTTCGTGTAAGTACGCTAACCCTCTGGCTATTCCCTTTGCGATTTCTACTCTTTGTGTCCAATTACAATTAGGGTTTTCGCCATTGTTGAAGAGGATTCTCGATAGTGCTCCATTGGGCATTAGCTCGTACACTAGAAGAAGTTGCTTCTTGTTTTCGACGCAAGCTTCCCTGGCCAAGGATCTTGTTGAATCCATCGGTTGCCTCAACCAATTCCTGGAAAGTGAATTCTCGGAAATTGATTCCGATGGCACTCGCACTCGAAAATTTCTTCTTCCTAATCAATCTTCGAGCCGTTGGATGATAAAAAACGACAACGGCACCGAAGCAAAAAGCCAAAACTCCGACGATTATATTGCCAATCTCCAGGACTTTCCGGCCTCAAAATCGACATTTAACGTACGAGCCAAATCTGAGAAAGGCTCTGATTCAGGTGGCAAGTCAATATCCACATCGTCGATCACCTGGAGGTTTCCGGTCGACAGCCTTTCCAAGCATCCGCCGGATCCAAATGAACAAAACCCGGCAAGCAATCGCAGAGTCCATTTAAGCCGCAAACATTGTTCACAAGGCAAGGGTCTCTCATGGCTCCCCAAACCTTTATCCATTCACTGCCATTACTTTTCGGGTAAACATATTGCCAGAAATCGCCATGGACATTTAATGTTGCTCTGTGGTAGTAATCTCCAACTGGGGCTGGAACATTGA

Coding sequence (CDS)

ATGATCTGTGTCTCGCACTCTTCGTGTAAGTACGCTAACCCTCTGGCTATTCCCTTTGCGATTTCTACTCTTTGTGTCCAATTACAATTAGGGTTTTCGCCATTGTTGAAGAGGATTCTCGATAGTGCTCCATTGGGCATTAGCTCGTACACTAGAAGAAGTTGCTTCTTGTTTTCGACGCAAGCTTCCCTGGCCAAGGATCTTGTTGAATCCATCGGTTGCCTCAACCAATTCCTGGAAAGTGAATTCTCGGAAATTGATTCCGATGGCACTCGCACTCGAAAATTTCTTCTTCCTAATCAATCTTCGAGCCGTTGGATGATAAAAAACGACAACGGCACCGAAGCAAAAAGCCAAAACTCCGACGATTATATTGCCAATCTCCAGGACTTTCCGGCCTCAAAATCGACATTTAACGTACGAGCCAAATCTGAGAAAGGCTCTGATTCAGGTGGCAAGTCAATATCCACATCGTCGATCACCTGGAGGTTTCCGGTCGACAGCCTTTCCAAGCATCCGCCGGATCCAAATGAACAAAACCCGGCAAGCAATCGCAGAGTCCATTTAAGCCGCAAACATTGTTCACAAGGCAAGGGTCTCTCATGGCTCCCCAAACCTTTATCCATTCACTGCCATTACTTTTCGGGTAAACATATTGCCAGAAATCGCCATGGACATTTAATGTTGCTCTGTGGTAGTAATCTCCAACTGGGGCTGGAACATTGA

Protein sequence

MICVSHSSCKYANPLAIPFAISTLCVQLQLGFSPLLKRILDSAPLGISSYTRRSCFLFSTQASLAKDLVESIGCLNQFLESEFSEIDSDGTRTRKFLLPNQSSSRWMIKNDNGTEAKSQNSDDYIANLQDFPASKSTFNVRAKSEKGSDSGGKSISTSSITWRFPVDSLSKHPPDPNEQNPASNRRVHLSRKHCSQGKGLSWLPKPLSIHCHYFSGKHIARNRHGHLMLLCGSNLQLGLEH
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C05G086470.1Cla97C05G086470.1mRNA


Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 165..191

The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cla97C05G086470Lsi05G014310Bottle gourd (USVL1VR-Ls)lsiwmbB330
The following gene(s) are paralogous to this gene:

None