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| Name | Cla97C05G081990.1 |
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| Type | mRNA |
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| Organism | Citrullus lanatus (Watermelon (97103) v2) |
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| Description | mediator of RNA polymerase II transcription subunit 2-like |
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| Location | Cla97Chr05 : 1530097 .. 1530988 (+) |
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| Sequence length | 327 |
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The following sequences are available for this feature:
Gene sequence (with intron) Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. ATGTCATTGGAGACGGGTTAATGAATGACAGAATGGTCCGACCCGGTTCAATATAAATTGCTTCATCACAGTTTCTAACTTTATTCGGGCTAGGGTTTAAGAAAACGGTGATCTTCGCGATATCTGCGAGCAAATTTCCGGCGGCAGGGAGAAACAATATGTCGAAGAAGAACAATCTTTCGCGCAGGAAGAAGCAATATGAATTCGACCTTCAAAGTAACTTCTAATAATGGATTAATTTTTCGAATAAACTGTTTGTACGTTCCAGTTGATTCACTTTCGTGGTTCTTATACTACTGTTCTTACTTGGGCGAATTGATTAGGGGAGAAACAAGAAAAGGAAAAGGCCGCGAAGAAGCTTCAAGCAAAGAAGAATAAGATGAAAGTAAGTCTCCCTCTTTCTCTCCATGGAATCGAGAAAATCTTCATTGATTAAAAAATATTGAAGTTAGGGGCAGAGATTGCTTATTGTTTCTGTTTGGTTTACACTTCATCTGGGAATTTTCTCATACGGGTAATGTTCTAGTTTTCACTTATTCCAATAGCATAACCCACGAGCATTTTGTCCACTAAGATTGAGAAGTTTAATGACTTCCTACTGCATGATTTTTTTGGATAAGATTGAGAAGTTTAACGACTTCCTACTGCATGATTTTTCTGGATAATTAGGCAATACTCGATGGATTTGGAACAAGTTCTGTTTGCTGTTCGTGTTCTTTTAATACCATTCGAAAGTCTTATGATTTTCGTATAATTATGTTCTTAGGTTGATGGTAGTGGAAAGAAAAAGAAGGGTGGAGGTGGATTTCAAGTTGGGAAGAAAAAAGTGAAGACCAAGTTGACGGCAGCAGCAAAAGCAAAAGCTTCCCAGGCTATGGAGCTTGATAAATGA mRNA sequence ATGTCATTGGAGACGGGGTTTAAGAAAACGGTGATCTTCGCGATATCTGCGAGCAAATTTCCGGCGGCAGGGAGAAACAATATGTCGAAGAAGAACAATCTTTCGCGCAGGAAGAAGCAATATGAATTCGACCTTCAAAGGGAGAAACAAGAAAAGGAAAAGGCCGCGAAGAAGCTTCAAGCAAAGAAGAATAAGATGAAAGTTGATGGTAGTGGAAAGAAAAAGAAGGGTGGAGGTGGATTTCAAGTTGGGAAGAAAAAAGTGAAGACCAAGTTGACGGCAGCAGCAAAAGCAAAAGCTTCCCAGGCTATGGAGCTTGATAAATGA Coding sequence (CDS) ATGTCATTGGAGACGGGGTTTAAGAAAACGGTGATCTTCGCGATATCTGCGAGCAAATTTCCGGCGGCAGGGAGAAACAATATGTCGAAGAAGAACAATCTTTCGCGCAGGAAGAAGCAATATGAATTCGACCTTCAAAGGGAGAAACAAGAAAAGGAAAAGGCCGCGAAGAAGCTTCAAGCAAAGAAGAATAAGATGAAAGTTGATGGTAGTGGAAAGAAAAAGAAGGGTGGAGGTGGATTTCAAGTTGGGAAGAAAAAAGTGAAGACCAAGTTGACGGCAGCAGCAAAAGCAAAAGCTTCCCAGGCTATGGAGCTTGATAAATGA Protein sequence MSLETGFKKTVIFAISASKFPAAGRNNMSKKNNLSRRKKQYEFDLQREKQEKEKAAKKLQAKKNKMKVDGSGKKKKGGGGFQVGKKKVKTKLTAAAKAKASQAMELDK
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
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| Match Name | E-value | Identity | Description | |
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| Match Name | E-value | Identity | Description | |
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| Match Name | E-value | Identity | Description | |
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This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Type |
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| Cla97C05G081990.1 | Cla97C05G081990.1-protein | polypeptide |
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Type |
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| Cla97C05G081990.1.exon.1 | Cla97C05G081990.1.exon.1 | exon |
| Cla97C05G081990.1.exon.2 | Cla97C05G081990.1.exon.2 | exon |
| Cla97C05G081990.1.exon.3 | Cla97C05G081990.1.exon.3 | exon |
| Cla97C05G081990.1.exon.4 | Cla97C05G081990.1.exon.4 | exon |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Type |
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| Cla97C05G081990.1.CDS.1 | Cla97C05G081990.1.CDS.1 | CDS |
| Cla97C05G081990.1.CDS.2 | Cla97C05G081990.1.CDS.2 | CDS |
| Cla97C05G081990.1.CDS.3 | Cla97C05G081990.1.CDS.3 | CDS |
| Cla97C05G081990.1.CDS.4 | Cla97C05G081990.1.CDS.4 | CDS |
Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
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| None | No IPR available | COILS | Coil | Coil | coord: 31..69 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 43..86 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 43..74 |
| None | No IPR available | PANTHER | PTHR36745 | FAMILY NOT NAMED | coord: 28..108 |
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