Cla021740.1 (mRNA) Watermelon (97103) v1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCTTCTTCCAATCCGCCATTCAAATCCAGACCAGAATCCAAATACACCAAGGCCAAGAGAGCGCTCCGATCACTCGCCGTCTCCGTCGCCATTCCCCTCTTCCTAACAATCGCCGTCATCTTCCTCTTCGGTCGCTCCGCTCGCCATTTCCCCAATCGGAACCGTCCCATTTGGATACCACCGCTCTGGTTTCTCCATCTCTCCTCCATTGGCTCCTCCTTTCTAATCGGCCTCGCCGCTTGGCTCGTTTGGGCGGACGGTGGTTTCCACGGCGGGGGCAACGCTACATCGCGCATCTTTCTCTTAGCGTCGTTTGGAATCCTCTGGTGCTCGTGA ATGTCTTCTTCCAATCCGCCATTCAAATCCAGACCAGAATCCAAATACACCAAGGCCAAGAGAGCGCTCCGATCACTCGCCGTCTCCGTCGCCATTCCCCTCTTCCTAACAATCGCCGTCATCTTCCTCTTCGGTCGCTCCGCTCGCCATTTCCCCAATCGGAACCGTCCCATTTGGATACCACCGCTCTGGTTTCTCCATCTCTCCTCCATTGGCTCCTCCTTTCTAATCGGCCTCGCCGCTTGGCTCGTTTGGGCGGACGGTGGTTTCCACGGCGGGGGCAACGCTACATCGCGCATCTTTCTCTTAGCGTCGTTTGGAATCCTCTGGTGCTCGTGA ATGTCTTCTTCCAATCCGCCATTCAAATCCAGACCAGAATCCAAATACACCAAGGCCAAGAGAGCGCTCCGATCACTCGCCGTCTCCGTCGCCATTCCCCTCTTCCTAACAATCGCCGTCATCTTCCTCTTCGGTCGCTCCGCTCGCCATTTCCCCAATCGGAACCGTCCCATTTGGATACCACCGCTCTGGTTTCTCCATCTCTCCTCCATTGGCTCCTCCTTTCTAATCGGCCTCGCCGCTTGGCTCGTTTGGGCGGACGGTGGTTTCCACGGCGGGGGCAACGCTACATCGCGCATCTTTCTCTTAGCGTCGTTTGGAATCCTCTGGTGCTCGTGA MSSSNPPFKSRPESKYTKAKRALRSLAVSVAIPLFLTIAVIFLFGRSARHFPNRNRPIWIPPLWFLHLSSIGSSFLIGLAAWLVWADGGFHGGGNATSRIFLLASFGILWCS
BLAST of Cla021740 vs. Swiss-Prot
Match: TSPO_ARATH (Translocator protein homolog OS=Arabidopsis thaliana GN=TSPO PE=1 SV=1) HSP 1 Score: 86.7 bits (213), Expect = 1.8e-16 Identity = 41/88 (46.59%), Postives = 51/88 (57.95%), Query Frame = 1
BLAST of Cla021740 vs. TrEMBL
Match: A0A0A0L583_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G154290 PE=4 SV=1) HSP 1 Score: 181.4 bits (459), Expect = 6.0e-43 Identity = 86/110 (78.18%), Postives = 93/110 (84.55%), Query Frame = 1
BLAST of Cla021740 vs. TrEMBL
Match: V7AZB6_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_009G248000g PE=4 SV=1) HSP 1 Score: 116.3 bits (290), Expect = 2.4e-23 Identity = 53/98 (54.08%), Postives = 72/98 (73.47%), Query Frame = 1
BLAST of Cla021740 vs. TrEMBL
Match: A0A061EW61_THECC (TSPO(Outer membrane tryptophan-rich sensory protein)-related, putative OS=Theobroma cacao GN=TCM_021206 PE=4 SV=1) HSP 1 Score: 115.2 bits (287), Expect = 5.3e-23 Identity = 54/105 (51.43%), Postives = 68/105 (64.76%), Query Frame = 1
BLAST of Cla021740 vs. TrEMBL
Match: V4RYC8_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10007035mg PE=4 SV=1) HSP 1 Score: 112.1 bits (279), Expect = 4.5e-22 Identity = 49/108 (45.37%), Postives = 74/108 (68.52%), Query Frame = 1
BLAST of Cla021740 vs. TrEMBL
Match: A0A072VGH3_MEDTR (TSPO/MBR family protein OS=Medicago truncatula GN=MTR_2g436790 PE=4 SV=1) HSP 1 Score: 112.1 bits (279), Expect = 4.5e-22 Identity = 53/98 (54.08%), Postives = 69/98 (70.41%), Query Frame = 1
BLAST of Cla021740 vs. NCBI nr
Match: gi|449433405|ref|XP_004134488.1| (PREDICTED: translocator protein homolog [Cucumis sativus]) HSP 1 Score: 181.4 bits (459), Expect = 8.6e-43 Identity = 86/110 (78.18%), Postives = 93/110 (84.55%), Query Frame = 1
BLAST of Cla021740 vs. NCBI nr
Match: gi|593330967|ref|XP_007138910.1| (hypothetical protein PHAVU_009G248000g [Phaseolus vulgaris]) HSP 1 Score: 116.3 bits (290), Expect = 3.4e-23 Identity = 53/98 (54.08%), Postives = 72/98 (73.47%), Query Frame = 1
BLAST of Cla021740 vs. NCBI nr
Match: gi|590661109|ref|XP_007035583.1| (TSPO(outer membrane tryptophan-rich sensory protein)-related, putative [Theobroma cacao]) HSP 1 Score: 115.2 bits (287), Expect = 7.6e-23 Identity = 54/105 (51.43%), Postives = 68/105 (64.76%), Query Frame = 1
BLAST of Cla021740 vs. NCBI nr
Match: gi|922389660|ref|XP_013463253.1| (TSPO/MBR family protein [Medicago truncatula]) HSP 1 Score: 112.1 bits (279), Expect = 6.4e-22 Identity = 53/98 (54.08%), Postives = 69/98 (70.41%), Query Frame = 1
BLAST of Cla021740 vs. NCBI nr
Match: gi|567852837|ref|XP_006419582.1| (hypothetical protein CICLE_v10007035mg [Citrus clementina]) HSP 1 Score: 112.1 bits (279), Expect = 6.4e-22 Identity = 49/108 (45.37%), Postives = 74/108 (68.52%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
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