Cla018801.1 (mRNA) Watermelon (97103) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla018801
Type	mRNA
Organism	Citrullus. lanatus (Watermelon (97103) v1)
Description	Pathogenesis-related protein PR-1 (AHRD V1 ***- B6UG61_MAIZE); contains Interpro domain(s) IPR001283 Allergen V5/Tpx-1 related
Location	Chr6 : 22272131 .. 22272637 (-)
Sequence length	507

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCATGCATATCTTCTCATTCCCATCGCCATTTTCATCCTCCTAAGCTCCACCGGCCACACCGCCGCAGCTCCGTCGAGGTCCGACATAGTTTTGCAAAAGCAATTCCTCGGCCCTCACAATGCCGCCAGATTCGCCCTCCGATTGGCCCCCTTAGTTTGGGACTCCAAATTGGCTCGCTACGCACAGTCGTATGCCAACAAGCGGCGAGGGGATTGCGCCCTCCGCCACTCCGGAGGACCATACGGCGAAAATATCTTCTGGGGCAGCGGCAATGCGTGGACTCCGGCTCAGGCCGTCGGAGATTGGGTATCGGAGCGAAAATGGTACAGCTACTGGGCAAATTCTTGCGTGGAAGGTGAACTATGTGGTCATTATACTCAGATTGTGTGGCGGTCGACACGGCGGATTGGGTGCGCCAGAGTGATTTGCAACGACGGTAAAGGCGTGTTTATTACTTGCAACTATGACCCTCCTGGTAATTACATTGGGATGAGACCTTATTAA

mRNA sequence

ATGCATGCATATCTTCTCATTCCCATCGCCATTTTCATCCTCCTAAGCTCCACCGGCCACACCGCCGCAGCTCCGTCGAGGTCCGACATAGTTTTGCAAAAGCAATTCCTCGGCCCTCACAATGCCGCCAGATTCGCCCTCCGATTGGCCCCCTTAGTTTGGGACTCCAAATTGGCTCGCTACGCACAGTCGTATGCCAACAAGCGGCGAGGGGATTGCGCCCTCCGCCACTCCGGAGGACCATACGGCGAAAATATCTTCTGGGGCAGCGGCAATGCGTGGACTCCGGCTCAGGCCGTCGGAGATTGGGTATCGGAGCGAAAATGGTACAGCTACTGGGCAAATTCTTGCGTGGAAGGTGAACTATGTGGTCATTATACTCAGATTGTGTGGCGGTCGACACGGCGGATTGGGTGCGCCAGAGTGATTTGCAACGACGGTAAAGGCGTGTTTATTACTTGCAACTATGACCCTCCTGGTAATTACATTGGGATGAGACCTTATTAA

Coding sequence (CDS)

ATGCATGCATATCTTCTCATTCCCATCGCCATTTTCATCCTCCTAAGCTCCACCGGCCACACCGCCGCAGCTCCGTCGAGGTCCGACATAGTTTTGCAAAAGCAATTCCTCGGCCCTCACAATGCCGCCAGATTCGCCCTCCGATTGGCCCCCTTAGTTTGGGACTCCAAATTGGCTCGCTACGCACAGTCGTATGCCAACAAGCGGCGAGGGGATTGCGCCCTCCGCCACTCCGGAGGACCATACGGCGAAAATATCTTCTGGGGCAGCGGCAATGCGTGGACTCCGGCTCAGGCCGTCGGAGATTGGGTATCGGAGCGAAAATGGTACAGCTACTGGGCAAATTCTTGCGTGGAAGGTGAACTATGTGGTCATTATACTCAGATTGTGTGGCGGTCGACACGGCGGATTGGGTGCGCCAGAGTGATTTGCAACGACGGTAAAGGCGTGTTTATTACTTGCAACTATGACCCTCCTGGTAATTACATTGGGATGAGACCTTATTAA

Protein sequence

MHAYLLIPIAIFILLSSTGHTAAAPSRSDIVLQKQFLGPHNAARFALRLAPLVWDSKLARYAQSYANKRRGDCALRHSGGPYGENIFWGSGNAWTPAQAVGDWVSERKWYSYWANSCVEGELCGHYTQIVWRSTRRIGCARVICNDGKGVFITCNYDPPGNYIGMRPY

Homology

[Close]

BLAST of Cla018801 vs. Swiss-Prot
Match: PR1_MEDTR (Pathogenesis-related protein PR-1 OS=Medicago truncatula GN=PR-1 PE=2 SV=1)

HSP 1 Score: 221.1 bits (562), Expect = 9.2e-57
Identity = 98/161 (60.87%), Postives = 117/161 (72.67%), Query Frame = 1


Query: 13  ILLSSTGHTAAA--PSRSDIV---LQKQFLGPHNAARFALRLAPLVWDSKLARYAQSYAN 72
           +LL+   H +A+  P++        + QFL P N AR A+ L PLVWD KL  YAQ YAN
Sbjct: 13  LLLTFISHVSASYIPNKKSFKSRSFKNQFLIPQNIARAAVGLRPLVWDDKLTHYAQWYAN 72

Query: 73  KRRGDCALRHSGGPYGENIFWGSGNAWTPAQAVGDWVSERKWYSYWANSCVEGELCGHYT 132
           +RR DCAL HS GPYGENIFWGSG  W PAQAV  WV E+++Y+YW NSCV+GE+CGHYT
Sbjct: 73  QRRNDCALEHSNGPYGENIFWGSGVGWNPAQAVSAWVDEKQFYNYWHNSCVDGEMCGHYT 132

Query: 133 QIVWRSTRRIGCARVICNDGKGVFITCNYDPPGNYIGMRPY 169
           Q+VW ST ++GCA V+C+D KG F+TCNYDPPGNY G RPY
Sbjct: 133 QVVWGSTTKVGCASVVCSDDKGTFMTCNYDPPGNYYGERPY 173

[Close]

BLAST of Cla018801 vs. Swiss-Prot
Match: PRMS_MAIZE (Pathogenesis-related protein PRMS OS=Zea mays GN=PRMS PE=2 SV=1)

HSP 1 Score: 190.3 bits (482), Expect = 1.7e-47
Identity = 87/162 (53.70%), Postives = 111/162 (68.52%), Query Frame = 1


Query: 9   IAIFIL-LSSTGHTAAAPSRSDIVLQKQFLGPHNAARFALRLAPLVWDSKLARYAQSYAN 68
           +A+ +L L     TA  PS S+   Q  +L P N+AR A+ + P+ W +KL ++A+ YA 
Sbjct: 7   LAVLLLWLVMAAATAVHPSYSENSPQ-DYLTPQNSARAAVGVGPVTWSTKLQQFAEKYAA 66

Query: 69  KRRGDCALRHSGGPYGENIFWGS-GNAWTPAQAVGDWVSERKWYSYWANSCVEGELCGHY 128
           +R GDC L+HSGGPYGENIFWGS G  W    AV  WV E++WY+Y  NSC  G++CGHY
Sbjct: 67  QRAGDCRLQHSGGPYGENIFWGSAGFDWKAVDAVRSWVDEKQWYNYATNSCAAGKVCGHY 126

Query: 129 TQIVWRSTRRIGCARVICNDGKGVFITCNYDPPGNYIGMRPY 169
           TQ+VWR+T  IGCARV+C D +GVFI CNY+P GN  GM+PY
Sbjct: 127 TQVVWRATTSIGCARVVCRDNRGVFIICNYEPRGNIAGMKPY 167

[Close]

BLAST of Cla018801 vs. Swiss-Prot
Match: PR12_HORVU (Pathogenesis-related protein PRB1-2 OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 188.0 bits (476), Expect = 8.7e-47
Identity = 78/136 (57.35%), Postives = 103/136 (75.74%), Query Frame = 1


Query: 34  KQFLGPHNAARFALRLAPLVWDSKLARYAQSYANKRRGDCALRHSGGPYGENIFWGSGNA 93
           + ++ PHNAAR A+ +  + W +KL  +AQ+YAN+R  DC L+HSGGPYGENIFWGS  A
Sbjct: 29  QDYVSPHNAARSAVGVGAVSWSTKLQAFAQNYANQRINDCKLQHSGGPYGENIFWGSAGA 88

Query: 94  -WTPAQAVGDWVSERKWYSYWANSCVEGELCGHYTQIVWRSTRRIGCARVICNDGKGVFI 153
            W  A AV  WV+E+K Y+Y +N+C  G++CGHYTQ+VWR++  IGCARV+CN+ +GVFI
Sbjct: 89  DWKAADAVNSWVNEKKDYNYGSNTCAAGKVCGHYTQVVWRASTSIGCARVVCNNNRGVFI 148

Query: 154 TCNYDPPGNYIGMRPY 169
           TCNY+P GN +G +PY
Sbjct: 149 TCNYEPRGNIVGQKPY 164

[Close]

BLAST of Cla018801 vs. Swiss-Prot
Match: PR1_HORVU (Pathogenesis-related protein 1 OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 188.0 bits (476), Expect = 8.7e-47
Identity = 79/136 (58.09%), Postives = 102/136 (75.00%), Query Frame = 1


Query: 34  KQFLGPHNAARFALRLAPLVWDSKLARYAQSYANKRRGDCALRHSGGPYGENIFWGSGNA 93
           + ++ PHNAAR A+ +  + W +KL  +AQ+YAN+R  DC L+HSGGPYGENIFWGS  A
Sbjct: 29  QDYVSPHNAARSAVGVGAVSWSTKLQAFAQNYANQRINDCKLQHSGGPYGENIFWGSAGA 88

Query: 94  -WTPAQAVGDWVSERKWYSYWANSCVEGELCGHYTQIVWRSTRRIGCARVICNDGKGVFI 153
            W  + AV  WVSE+K Y Y +N+C  G++CGHYTQ+VWR++  IGCARV+CN+ +GVFI
Sbjct: 89  DWKASDAVNSWVSEKKDYDYGSNTCAAGKVCGHYTQVVWRASTSIGCARVVCNNNRGVFI 148

Query: 154 TCNYDPPGNYIGMRPY 169
           TCNY+P GN IG +PY
Sbjct: 149 TCNYEPRGNIIGQKPY 164

[Close]

BLAST of Cla018801 vs. Swiss-Prot
Match: PR13_HORVU (Pathogenesis-related protein PRB1-3 OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 1.1e-46
Identity = 78/136 (57.35%), Postives = 102/136 (75.00%), Query Frame = 1


Query: 34  KQFLGPHNAARFALRLAPLVWDSKLARYAQSYANKRRGDCALRHSGGPYGENIFWGSGNA 93
           + ++ PHNAAR A+ +  + W +KL  +AQ+YAN+R  DC L+HSGGPYGENIFWGS  A
Sbjct: 29  QDYVSPHNAARAAVGVGAVSWSTKLQAFAQNYANQRINDCKLQHSGGPYGENIFWGSAGA 88

Query: 94  -WTPAQAVGDWVSERKWYSYWANSCVEGELCGHYTQIVWRSTRRIGCARVICNDGKGVFI 153
            W  + AV  WVSE+K Y Y +N+C  G++CGHYTQ+VWR++  IGCARV+CN+ +GVFI
Sbjct: 89  DWKASDAVNSWVSEKKDYDYGSNTCAAGKVCGHYTQVVWRASTSIGCARVVCNNNRGVFI 148

Query: 154 TCNYDPPGNYIGMRPY 169
           TCNY+P GN +G +PY
Sbjct: 149 TCNYEPRGNIVGQKPY 164

[Close]

BLAST of Cla018801 vs. TrEMBL
Match: A0A0A0LWR4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G420610 PE=3 SV=1)

HSP 1 Score: 322.0 bits (824), Expect = 4.3e-85
Identity = 150/170 (88.24%), Postives = 157/170 (92.35%), Query Frame = 1


Query: 1   MHAY-LLIPIAIFILLSSTGHTAAAPS-RSDIVLQKQFLGPHNAARFALRLAPLVWDSKL 60
           MHAY L+IPI I +LL+ST + AAAPS RSD +LQKQFL PHNAAR+ALRL+PLVWD KL
Sbjct: 1   MHAYFLIIPIPILLLLTSTPYAAAAPSIRSDRILQKQFLAPHNAARYALRLSPLVWDPKL 60

Query: 61  ARYAQSYANKRRGDCALRHSGGPYGENIFWGSGNAWTPAQAVGDWVSERKWYSYWANSCV 120
           ARYAQSYANKRRGDCALRHSGGPYGENIFWGSG  WTPAQAV DWVSERKWYSYWANSCV
Sbjct: 61  ARYAQSYANKRRGDCALRHSGGPYGENIFWGSGKDWTPAQAVADWVSERKWYSYWANSCV 120

Query: 121 EGELCGHYTQIVWRSTRRIGCARVICNDGKGVFITCNYDPPGNYIGMRPY 169
           EGELCGHYTQIVWRSTRRIGCARV CNDGKGVFITCNYDPPGNYIGMRPY
Sbjct: 121 EGELCGHYTQIVWRSTRRIGCARVTCNDGKGVFITCNYDPPGNYIGMRPY 170

[Close]

BLAST of Cla018801 vs. TrEMBL
Match: A0A061GQH8_THECC (STS14 protein, putative OS=Theobroma cacao GN=TCM_038873 PE=3 SV=1)

HSP 1 Score: 245.0 bits (624), Expect = 6.6e-62
Identity = 111/160 (69.38%), Postives = 126/160 (78.75%), Query Frame = 1


Query: 9   IAIFILLSSTGHTAAAPSRSDIVLQKQFLGPHNAARFALRLAPLVWDSKLARYAQSYANK 68
           I +F+LL ST         + + L  QFL P NAAR A+R+ PLVWD++LARYAQ YAN+
Sbjct: 13  IIVFLLLISTTQA------NYLSLVNQFLAPQNAARAAIRVRPLVWDARLARYAQWYANQ 72

Query: 69  RRGDCALRHSGGPYGENIFWGSGNAWTPAQAVGDWVSERKWYSYWANSCVEGELCGHYTQ 128
           RR DCALRHS GPYGENIFWGSGN WTPAQA   WVSERKWY+YW+NSC  GE CGHYTQ
Sbjct: 73  RRKDCALRHSNGPYGENIFWGSGNGWTPAQAAVAWVSERKWYNYWSNSCAGGEECGHYTQ 132

Query: 129 IVWRSTRRIGCARVICNDGKGVFITCNYDPPGNYIGMRPY 169
           IVW  TRR+GCARV C+ G+GVF+TCNYDPPGNYIG RPY
Sbjct: 133 IVWSRTRRVGCARVTCDGGRGVFMTCNYDPPGNYIGERPY 166

[Close]

BLAST of Cla018801 vs. TrEMBL
Match: B9T2E4_RICCO (STS14 protein, putative OS=Ricinus communis GN=RCOM_0078380 PE=3 SV=1)

HSP 1 Score: 243.8 bits (621), Expect = 1.5e-61
Identity = 111/169 (65.68%), Postives = 130/169 (76.92%), Query Frame = 1


Query: 6   LIPIAIFILLSSTGHTAAAPS------RSDIVLQKQFLGPHNAARFALRLAPLVWDSKLA 65
           +I I++F+   +T  +AAA S       + +    QFLGPHNAAR ALR+ PL+WD++LA
Sbjct: 11  IISISLFLTTRATQSSAAAESAIANHQHAYLSTANQFLGPHNAARAALRMPPLIWDTRLA 70

Query: 66  RYAQSYANKRRGDCALRHSGGPYGENIFWGSGNAWTPAQAVGDWVSERKWYSYWANSCVE 125
            YAQ YAN+RR DC LRHS GPYGENIFWGSG  WTPAQAV  WVSERKWY+YW+NSC  
Sbjct: 71  NYAQWYANQRRFDCDLRHSNGPYGENIFWGSGTGWTPAQAVTAWVSERKWYNYWSNSCYG 130

Query: 126 GELCGHYTQIVWRSTRRIGCARVICNDGKGVFITCNYDPPGNYIGMRPY 169
            + CGHYTQIVWR TRRIGCA+V C+D  GVF+TCNYDPPGNYIG RPY
Sbjct: 131 HQECGHYTQIVWRKTRRIGCAKVTCSDDLGVFMTCNYDPPGNYIGERPY 179

[Close]

BLAST of Cla018801 vs. TrEMBL
Match: A0A0D2P9J9_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_004G101200 PE=3 SV=1)

HSP 1 Score: 243.4 bits (620), Expect = 1.9e-61
Identity = 108/160 (67.50%), Postives = 126/160 (78.75%), Query Frame = 1


Query: 9   IAIFILLSSTGHTAAAPSRSDIVLQKQFLGPHNAARFALRLAPLVWDSKLARYAQSYANK 68
           I + +LL ST   A     + + L  QFL P NAAR A+R+ PLVWDS+LARYAQ YAN+
Sbjct: 13  IIVSLLLVSTTQAA-----NYLSLINQFLAPQNAARVAIRMRPLVWDSRLARYAQWYANQ 72

Query: 69  RRGDCALRHSGGPYGENIFWGSGNAWTPAQAVGDWVSERKWYSYWANSCVEGELCGHYTQ 128
           RR DCALRHS GPYGENIFWGSGN WTP+QA   WVSERKWY+YW+NSC  GE CGHYTQ
Sbjct: 73  RRKDCALRHSNGPYGENIFWGSGNGWTPSQAAEAWVSERKWYNYWSNSCAGGEECGHYTQ 132

Query: 129 IVWRSTRRIGCARVICNDGKGVFITCNYDPPGNYIGMRPY 169
           +VW  T+ +GCARV+CN G+G+F+TCNYDPPGNYIG RPY
Sbjct: 133 VVWGRTKTVGCARVVCNGGRGIFMTCNYDPPGNYIGERPY 167

[Close]

BLAST of Cla018801 vs. TrEMBL
Match: C6SZJ3_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_13G094200 PE=2 SV=1)

HSP 1 Score: 237.3 bits (604), Expect = 1.4e-59
Identity = 106/168 (63.10%), Postives = 123/168 (73.21%), Query Frame = 1


Query: 4   YLLIPIAIFILLSSTGHTAAAPSRSDIV---LQKQFLGPHNAARFALRLAPLVWDSKLAR 63
           + L   A+F+LL +T +    P+ +         QFL P NAAR  LRL PLVWDSKLA 
Sbjct: 8   HFLSCFALFLLLVATTYATVVPTTTQKPPRSFANQFLIPQNAARAVLRLRPLVWDSKLAH 67

Query: 64  YAQSYANKRRGDCALRHSGGPYGENIFWGSGNAWTPAQAVGDWVSERKWYSYWANSCVEG 123
           YAQ YAN+RR DCAL HS GPYGENIFWGSG  W PAQAV  WV ER+WY+YW NSC  G
Sbjct: 68  YAQWYANQRRNDCALEHSNGPYGENIFWGSGTGWKPAQAVSAWVEERQWYNYWHNSCANG 127

Query: 124 ELCGHYTQIVWRSTRRIGCARVICNDGKGVFITCNYDPPGNYIGMRPY 169
           ++CGHYTQIVW +TR+IGCA V+C+ GKG F+TCNYDPPGNY G RPY
Sbjct: 128 QMCGHYTQIVWSTTRKIGCASVVCSGGKGTFMTCNYDPPGNYYGERPY 175

[Close]

BLAST of Cla018801 vs. NCBI nr
Match: gi|659107363|ref|XP_008453637.1| (PREDICTED: pathogenesis-related protein PR-1 [Cucumis melo])

HSP 1 Score: 324.7 bits (831), Expect = 9.5e-86
Identity = 153/171 (89.47%), Postives = 159/171 (92.98%), Query Frame = 1


Query: 1   MHAYLLI--PIA-IFILLSSTGHTAAAPSRSDIVLQKQFLGPHNAARFALRLAPLVWDSK 60
           MHA+ LI  PIA I +LL+STG TAAA SRSD +LQKQFLGPHNAAR+ALRL+PLVWDSK
Sbjct: 1   MHAHFLIIIPIATILLLLTSTGCTAAARSRSDRILQKQFLGPHNAARYALRLSPLVWDSK 60

Query: 61  LARYAQSYANKRRGDCALRHSGGPYGENIFWGSGNAWTPAQAVGDWVSERKWYSYWANSC 120
           LARYAQ YANKRRGDCALRHSGGPYGENIFWGSGN WTPAQAV DWVSERKWYSYWANSC
Sbjct: 61  LARYAQWYANKRRGDCALRHSGGPYGENIFWGSGNEWTPAQAVADWVSERKWYSYWANSC 120

Query: 121 VEGELCGHYTQIVWRSTRRIGCARVICNDGKGVFITCNYDPPGNYIGMRPY 169
           VEGELCGHYTQIVWRSTRRIGCARV CNDGKGVFITCNYDPPGNYIGMRPY
Sbjct: 121 VEGELCGHYTQIVWRSTRRIGCARVTCNDGKGVFITCNYDPPGNYIGMRPY 171

[Close]

BLAST of Cla018801 vs. NCBI nr
Match: gi|449457129|ref|XP_004146301.1| (PREDICTED: pathogenesis-related protein PR-1-like [Cucumis sativus])

HSP 1 Score: 322.0 bits (824), Expect = 6.1e-85
Identity = 150/170 (88.24%), Postives = 157/170 (92.35%), Query Frame = 1


Query: 1   MHAY-LLIPIAIFILLSSTGHTAAAPS-RSDIVLQKQFLGPHNAARFALRLAPLVWDSKL 60
           MHAY L+IPI I +LL+ST + AAAPS RSD +LQKQFL PHNAAR+ALRL+PLVWD KL
Sbjct: 1   MHAYFLIIPIPILLLLTSTPYAAAAPSIRSDRILQKQFLAPHNAARYALRLSPLVWDPKL 60

Query: 61  ARYAQSYANKRRGDCALRHSGGPYGENIFWGSGNAWTPAQAVGDWVSERKWYSYWANSCV 120
           ARYAQSYANKRRGDCALRHSGGPYGENIFWGSG  WTPAQAV DWVSERKWYSYWANSCV
Sbjct: 61  ARYAQSYANKRRGDCALRHSGGPYGENIFWGSGKDWTPAQAVADWVSERKWYSYWANSCV 120

Query: 121 EGELCGHYTQIVWRSTRRIGCARVICNDGKGVFITCNYDPPGNYIGMRPY 169
           EGELCGHYTQIVWRSTRRIGCARV CNDGKGVFITCNYDPPGNYIGMRPY
Sbjct: 121 EGELCGHYTQIVWRSTRRIGCARVTCNDGKGVFITCNYDPPGNYIGMRPY 170

[Close]

BLAST of Cla018801 vs. NCBI nr
Match: gi|1009105492|ref|XP_015875903.1| (PREDICTED: pathogenesis-related protein PR-1 [Ziziphus jujuba])

HSP 1 Score: 246.1 bits (627), Expect = 4.3e-62
Identity = 112/168 (66.67%), Postives = 126/168 (75.00%), Query Frame = 1


Query: 1   MHAYLLIPIAIFILLSSTGHTAAAPSRSDIVLQKQFLGPHNAARFALRLAPLVWDSKLAR 60
           MH  +       +L+S+T   A       + L  QFL P NAAR  LR+ PLVWD +LAR
Sbjct: 1   MHTTITTFFVFLVLISATD--AFTKQNQYLNLANQFLAPQNAARSTLRMKPLVWDPRLAR 60

Query: 61  YAQSYANKRRGDCALRHSGGPYGENIFWGSGNAWTPAQAVGDWVSERKWYSYWANSCVEG 120
           YAQ YAN+RR DCAL+HS GPYGENIFWGSG+ WTPAQAV  WVSERKWY+YW+NSC   
Sbjct: 61  YAQGYANQRRNDCALKHSKGPYGENIFWGSGDEWTPAQAVTAWVSERKWYNYWSNSCAGN 120

Query: 121 ELCGHYTQIVWRSTRRIGCARVICNDGKGVFITCNYDPPGNYIGMRPY 169
           E CGHYTQIVWRST R+GCARV C+ GKGVFITCNYDPPGNYIG RPY
Sbjct: 121 EQCGHYTQIVWRSTSRVGCARVTCSRGKGVFITCNYDPPGNYIGERPY 166

[Close]

BLAST of Cla018801 vs. NCBI nr
Match: gi|590580677|ref|XP_007014137.1| (STS14 protein, putative [Theobroma cacao])

HSP 1 Score: 245.0 bits (624), Expect = 9.5e-62
Identity = 111/160 (69.38%), Postives = 126/160 (78.75%), Query Frame = 1


Query: 9   IAIFILLSSTGHTAAAPSRSDIVLQKQFLGPHNAARFALRLAPLVWDSKLARYAQSYANK 68
           I +F+LL ST         + + L  QFL P NAAR A+R+ PLVWD++LARYAQ YAN+
Sbjct: 13  IIVFLLLISTTQA------NYLSLVNQFLAPQNAARAAIRVRPLVWDARLARYAQWYANQ 72

Query: 69  RRGDCALRHSGGPYGENIFWGSGNAWTPAQAVGDWVSERKWYSYWANSCVEGELCGHYTQ 128
           RR DCALRHS GPYGENIFWGSGN WTPAQA   WVSERKWY+YW+NSC  GE CGHYTQ
Sbjct: 73  RRKDCALRHSNGPYGENIFWGSGNGWTPAQAAVAWVSERKWYNYWSNSCAGGEECGHYTQ 132

Query: 129 IVWRSTRRIGCARVICNDGKGVFITCNYDPPGNYIGMRPY 169
           IVW  TRR+GCARV C+ G+GVF+TCNYDPPGNYIG RPY
Sbjct: 133 IVWSRTRRVGCARVTCDGGRGVFMTCNYDPPGNYIGERPY 166

[Close]

BLAST of Cla018801 vs. NCBI nr
Match: gi|255583299|ref|XP_002532413.1| (PREDICTED: pathogenesis-related protein PR-1 [Ricinus communis])

HSP 1 Score: 243.8 bits (621), Expect = 2.1e-61
Identity = 111/169 (65.68%), Postives = 130/169 (76.92%), Query Frame = 1


Query: 6   LIPIAIFILLSSTGHTAAAPS------RSDIVLQKQFLGPHNAARFALRLAPLVWDSKLA 65
           +I I++F+   +T  +AAA S       + +    QFLGPHNAAR ALR+ PL+WD++LA
Sbjct: 11  IISISLFLTTRATQSSAAAESAIANHQHAYLSTANQFLGPHNAARAALRMPPLIWDTRLA 70

Query: 66  RYAQSYANKRRGDCALRHSGGPYGENIFWGSGNAWTPAQAVGDWVSERKWYSYWANSCVE 125
            YAQ YAN+RR DC LRHS GPYGENIFWGSG  WTPAQAV  WVSERKWY+YW+NSC  
Sbjct: 71  NYAQWYANQRRFDCDLRHSNGPYGENIFWGSGTGWTPAQAVTAWVSERKWYNYWSNSCYG 130

Query: 126 GELCGHYTQIVWRSTRRIGCARVICNDGKGVFITCNYDPPGNYIGMRPY 169
            + CGHYTQIVWR TRRIGCA+V C+D  GVF+TCNYDPPGNYIG RPY
Sbjct: 131 HQECGHYTQIVWRKTRRIGCAKVTCSDDLGVFMTCNYDPPGNYIGERPY 179

The following BLAST results are available for this feature:

BLAST of Cla018801 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PR1_MEDTR	9.2e-57	60.87	Pathogenesis-related protein PR-1 OS=Medicago truncatula GN=PR-1 PE=2 SV=1	[more]
PRMS_MAIZE	1.7e-47	53.70	Pathogenesis-related protein PRMS OS=Zea mays GN=PRMS PE=2 SV=1	[more]
PR12_HORVU	8.7e-47	57.35	Pathogenesis-related protein PRB1-2 OS=Hordeum vulgare PE=2 SV=1	[more]
PR1_HORVU	8.7e-47	58.09	Pathogenesis-related protein 1 OS=Hordeum vulgare PE=2 SV=1	[more]
PR13_HORVU	1.1e-46	57.35	Pathogenesis-related protein PRB1-3 OS=Hordeum vulgare PE=2 SV=1	[more]

BLAST of Cla018801 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LWR4_CUCSA	4.3e-85	88.24	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G420610 PE=3 SV=1	[more]
A0A061GQH8_THECC	6.6e-62	69.38	STS14 protein, putative OS=Theobroma cacao GN=TCM_038873 PE=3 SV=1	[more]
B9T2E4_RICCO	1.5e-61	65.68	STS14 protein, putative OS=Ricinus communis GN=RCOM_0078380 PE=3 SV=1	[more]
A0A0D2P9J9_GOSRA	1.9e-61	67.50	Uncharacterized protein OS=Gossypium raimondii GN=B456_004G101200 PE=3 SV=1	[more]
C6SZJ3_SOYBN	1.4e-59	63.10	Uncharacterized protein OS=Glycine max GN=GLYMA_13G094200 PE=2 SV=1	[more]

BLAST of Cla018801 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659107363\|ref\|XP_008453637.1\|	9.5e-86	89.47	PREDICTED: pathogenesis-related protein PR-1 [Cucumis melo]	[more]
gi\|449457129\|ref\|XP_004146301.1\|	6.1e-85	88.24	PREDICTED: pathogenesis-related protein PR-1-like [Cucumis sativus]	[more]
gi\|1009105492\|ref\|XP_015875903.1\|	4.3e-62	66.67	PREDICTED: pathogenesis-related protein PR-1 [Ziziphus jujuba]	[more]
gi\|590580677\|ref\|XP_007014137.1\|	9.5e-62	69.38	STS14 protein, putative [Theobroma cacao]	[more]
gi\|255583299\|ref\|XP_002532413.1\|	2.1e-61	65.68	PREDICTED: pathogenesis-related protein PR-1 [Ricinus communis]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR001283	Allrgn_V5/Tpx1
IPR002413	V5_allergen
IPR014044	CAP_domain
IPR018244	Allrgn_V5/Tpx1_CS

Vocabulary: **Cellular Component**
Term	Definition
GO:0005576	extracellular region

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005576	extracellular region
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cla018801	Cla018801	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cla018801	Cla018801.1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cla018801.1.cds1	Cla018801.1.cds1	CDS

InterPro

Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001283	Cysteine-rich secretory protein, allergen V5/Tpx-1-related	PRINTS	PR00837	V5TPXLIKE	coord: 123..139 score: 3.8E-20coord: 151..164 score: 3.8E-20coord: 99..112 score: 3.8E-20coord: 52..70 score: 3.8
IPR001283	Cysteine-rich secretory protein, allergen V5/Tpx-1-related	PANTHER	PTHR10334	CYSTEINE-RICH SECRETORY PROTEIN-RELATED	coord: 9..168 score: 4.3
IPR002413	Ves allergen	PRINTS	PR00838	V5ALLERGEN	coord: 52..70 score: 9.6E-7coord: 122..141 score: 9.
IPR014044	CAP domain	GENE3D	G3DSA:3.40.33.10		coord: 23..168 score: 5.8
IPR014044	CAP domain	PFAM	PF00188	CAP	coord: 39..156 score: 1.9
IPR014044	CAP domain	SMART	SM00198	SCP_3	coord: 31..164 score: 5.9
IPR014044	CAP domain	unknown	SSF55797	PR-1-like	coord: 10..168 score: 2.22
IPR018244	Allergen V5/Tpx-1-related, conserved site	PROSITE	PS01009	CRISP_1	coord: 124..134 scor
IPR018244	Allergen V5/Tpx-1-related, conserved site	PROSITE	PS01010	CRISP_2	coord: 151..162 scor
None	No IPR available	PANTHER	PTHR10334:SF204	ALLERGEN V5/TPX-1-RELATED FAMILY PROTEIN-RELATED	coord: 9..168 score: 4.3