Cla018801 (gene) Watermelon (97103) v1

Overview
NameCla018801
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionPathogenesis-related protein PR-1 (AHRD V1 ***- B6UG61_MAIZE); contains Interpro domain(s) IPR001283 Allergen V5/Tpx-1 related
LocationChr6 : 22272131 .. 22272637 (-)
Genome Viewer
Gene Expression
   



Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCATGCATATCTTCTCATTCCCATCGCCATTTTCATCCTCCTAAGCTCCACCGGCCACACCGCCGCAGCTCCGTCGAGGTCCGACATAGTTTTGCAAAAGCAATTCCTCGGCCCTCACAATGCCGCCAGATTCGCCCTCCGATTGGCCCCCTTAGTTTGGGACTCCAAATTGGCTCGCTACGCACAGTCGTATGCCAACAAGCGGCGAGGGGATTGCGCCCTCCGCCACTCCGGAGGACCATACGGCGAAAATATCTTCTGGGGCAGCGGCAATGCGTGGACTCCGGCTCAGGCCGTCGGAGATTGGGTATCGGAGCGAAAATGGTACAGCTACTGGGCAAATTCTTGCGTGGAAGGTGAACTATGTGGTCATTATACTCAGATTGTGTGGCGGTCGACACGGCGGATTGGGTGCGCCAGAGTGATTTGCAACGACGGTAAAGGCGTGTTTATTACTTGCAACTATGACCCTCCTGGTAATTACATTGGGATGAGACCTTATTAA

mRNA sequence

ATGCATGCATATCTTCTCATTCCCATCGCCATTTTCATCCTCCTAAGCTCCACCGGCCACACCGCCGCAGCTCCGTCGAGGTCCGACATAGTTTTGCAAAAGCAATTCCTCGGCCCTCACAATGCCGCCAGATTCGCCCTCCGATTGGCCCCCTTAGTTTGGGACTCCAAATTGGCTCGCTACGCACAGTCGTATGCCAACAAGCGGCGAGGGGATTGCGCCCTCCGCCACTCCGGAGGACCATACGGCGAAAATATCTTCTGGGGCAGCGGCAATGCGTGGACTCCGGCTCAGGCCGTCGGAGATTGGGTATCGGAGCGAAAATGGTACAGCTACTGGGCAAATTCTTGCGTGGAAGGTGAACTATGTGGTCATTATACTCAGATTGTGTGGCGGTCGACACGGCGGATTGGGTGCGCCAGAGTGATTTGCAACGACGGTAAAGGCGTGTTTATTACTTGCAACTATGACCCTCCTGGTAATTACATTGGGATGAGACCTTATTAA

Coding sequence (CDS)

ATGCATGCATATCTTCTCATTCCCATCGCCATTTTCATCCTCCTAAGCTCCACCGGCCACACCGCCGCAGCTCCGTCGAGGTCCGACATAGTTTTGCAAAAGCAATTCCTCGGCCCTCACAATGCCGCCAGATTCGCCCTCCGATTGGCCCCCTTAGTTTGGGACTCCAAATTGGCTCGCTACGCACAGTCGTATGCCAACAAGCGGCGAGGGGATTGCGCCCTCCGCCACTCCGGAGGACCATACGGCGAAAATATCTTCTGGGGCAGCGGCAATGCGTGGACTCCGGCTCAGGCCGTCGGAGATTGGGTATCGGAGCGAAAATGGTACAGCTACTGGGCAAATTCTTGCGTGGAAGGTGAACTATGTGGTCATTATACTCAGATTGTGTGGCGGTCGACACGGCGGATTGGGTGCGCCAGAGTGATTTGCAACGACGGTAAAGGCGTGTTTATTACTTGCAACTATGACCCTCCTGGTAATTACATTGGGATGAGACCTTATTAA

Protein sequence

MHAYLLIPIAIFILLSSTGHTAAAPSRSDIVLQKQFLGPHNAARFALRLAPLVWDSKLARYAQSYANKRRGDCALRHSGGPYGENIFWGSGNAWTPAQAVGDWVSERKWYSYWANSCVEGELCGHYTQIVWRSTRRIGCARVICNDGKGVFITCNYDPPGNYIGMRPY
Homology
[Close]
BLAST of Cla018801 vs. Swiss-Prot
Match: PR1_MEDTR (Pathogenesis-related protein PR-1 OS=Medicago truncatula GN=PR-1 PE=2 SV=1)

HSP 1 Score: 221.1 bits (562), Expect = 9.2e-57
Identity = 98/161 (60.87%), Postives = 117/161 (72.67%), Query Frame = 1 

Query: 13  ILLSSTGHTAAA--PSRSDIV---LQKQFLGPHNAARFALRLAPLVWDSKLARYAQSYAN 72
           +LL+   H +A+  P++        + QFL P N AR A+ L PLVWD KL  YAQ YAN
Sbjct: 13  LLLTFISHVSASYIPNKKSFKSRSFKNQFLIPQNIARAAVGLRPLVWDDKLTHYAQWYAN 72

Query: 73  KRRGDCALRHSGGPYGENIFWGSGNAWTPAQAVGDWVSERKWYSYWANSCVEGELCGHYT 132
           +RR DCAL HS GPYGENIFWGSG  W PAQAV  WV E+++Y+YW NSCV+GE+CGHYT
Sbjct: 73  QRRNDCALEHSNGPYGENIFWGSGVGWNPAQAVSAWVDEKQFYNYWHNSCVDGEMCGHYT 132

Query: 133 QIVWRSTRRIGCARVICNDGKGVFITCNYDPPGNYIGMRPY 169
           Q+VW ST ++GCA V+C+D KG F+TCNYDPPGNY G RPY
Sbjct: 133 QVVWGSTTKVGCASVVCSDDKGTFMTCNYDPPGNYYGERPY 173

[Close]
BLAST of Cla018801 vs. Swiss-Prot
Match: PRMS_MAIZE (Pathogenesis-related protein PRMS OS=Zea mays GN=PRMS PE=2 SV=1)

HSP 1 Score: 190.3 bits (482), Expect = 1.7e-47
Identity = 87/162 (53.70%), Postives = 111/162 (68.52%), Query Frame = 1 

Query: 9   IAIFIL-LSSTGHTAAAPSRSDIVLQKQFLGPHNAARFALRLAPLVWDSKLARYAQSYAN 68
           +A+ +L L     TA  PS S+   Q  +L P N+AR A+ + P+ W +KL ++A+ YA 
Sbjct: 7   LAVLLLWLVMAAATAVHPSYSENSPQ-DYLTPQNSARAAVGVGPVTWSTKLQQFAEKYAA 66

Query: 69  KRRGDCALRHSGGPYGENIFWGS-GNAWTPAQAVGDWVSERKWYSYWANSCVEGELCGHY 128
           +R GDC L+HSGGPYGENIFWGS G  W    AV  WV E++WY+Y  NSC  G++CGHY
Sbjct: 67  QRAGDCRLQHSGGPYGENIFWGSAGFDWKAVDAVRSWVDEKQWYNYATNSCAAGKVCGHY 126

Query: 129 TQIVWRSTRRIGCARVICNDGKGVFITCNYDPPGNYIGMRPY 169
           TQ+VWR+T  IGCARV+C D +GVFI CNY+P GN  GM+PY
Sbjct: 127 TQVVWRATTSIGCARVVCRDNRGVFIICNYEPRGNIAGMKPY 167

[Close]
BLAST of Cla018801 vs. Swiss-Prot
Match: PR12_HORVU (Pathogenesis-related protein PRB1-2 OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 188.0 bits (476), Expect = 8.7e-47
Identity = 78/136 (57.35%), Postives = 103/136 (75.74%), Query Frame = 1 

Query: 34  KQFLGPHNAARFALRLAPLVWDSKLARYAQSYANKRRGDCALRHSGGPYGENIFWGSGNA 93
           + ++ PHNAAR A+ +  + W +KL  +AQ+YAN+R  DC L+HSGGPYGENIFWGS  A
Sbjct: 29  QDYVSPHNAARSAVGVGAVSWSTKLQAFAQNYANQRINDCKLQHSGGPYGENIFWGSAGA 88

Query: 94  -WTPAQAVGDWVSERKWYSYWANSCVEGELCGHYTQIVWRSTRRIGCARVICNDGKGVFI 153
            W  A AV  WV+E+K Y+Y +N+C  G++CGHYTQ+VWR++  IGCARV+CN+ +GVFI
Sbjct: 89  DWKAADAVNSWVNEKKDYNYGSNTCAAGKVCGHYTQVVWRASTSIGCARVVCNNNRGVFI 148

Query: 154 TCNYDPPGNYIGMRPY 169
           TCNY+P GN +G +PY
Sbjct: 149 TCNYEPRGNIVGQKPY 164

[Close]
BLAST of Cla018801 vs. Swiss-Prot
Match: PR1_HORVU (Pathogenesis-related protein 1 OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 188.0 bits (476), Expect = 8.7e-47
Identity = 79/136 (58.09%), Postives = 102/136 (75.00%), Query Frame = 1 

Query: 34  KQFLGPHNAARFALRLAPLVWDSKLARYAQSYANKRRGDCALRHSGGPYGENIFWGSGNA 93
           + ++ PHNAAR A+ +  + W +KL  +AQ+YAN+R  DC L+HSGGPYGENIFWGS  A
Sbjct: 29  QDYVSPHNAARSAVGVGAVSWSTKLQAFAQNYANQRINDCKLQHSGGPYGENIFWGSAGA 88

Query: 94  -WTPAQAVGDWVSERKWYSYWANSCVEGELCGHYTQIVWRSTRRIGCARVICNDGKGVFI 153
            W  + AV  WVSE+K Y Y +N+C  G++CGHYTQ+VWR++  IGCARV+CN+ +GVFI
Sbjct: 89  DWKASDAVNSWVSEKKDYDYGSNTCAAGKVCGHYTQVVWRASTSIGCARVVCNNNRGVFI 148

Query: 154 TCNYDPPGNYIGMRPY 169
           TCNY+P GN IG +PY
Sbjct: 149 TCNYEPRGNIIGQKPY 164

[Close]
BLAST of Cla018801 vs. Swiss-Prot
Match: PR13_HORVU (Pathogenesis-related protein PRB1-3 OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 1.1e-46
Identity = 78/136 (57.35%), Postives = 102/136 (75.00%), Query Frame = 1 

Query: 34  KQFLGPHNAARFALRLAPLVWDSKLARYAQSYANKRRGDCALRHSGGPYGENIFWGSGNA 93
           + ++ PHNAAR A+ +  + W +KL  +AQ+YAN+R  DC L+HSGGPYGENIFWGS  A
Sbjct: 29  QDYVSPHNAARAAVGVGAVSWSTKLQAFAQNYANQRINDCKLQHSGGPYGENIFWGSAGA 88

Query: 94  -WTPAQAVGDWVSERKWYSYWANSCVEGELCGHYTQIVWRSTRRIGCARVICNDGKGVFI 153
            W  + AV  WVSE+K Y Y +N+C  G++CGHYTQ+VWR++  IGCARV+CN+ +GVFI
Sbjct: 89  DWKASDAVNSWVSEKKDYDYGSNTCAAGKVCGHYTQVVWRASTSIGCARVVCNNNRGVFI 148

Query: 154 TCNYDPPGNYIGMRPY 169
           TCNY+P GN +G +PY
Sbjct: 149 TCNYEPRGNIVGQKPY 164

[Close]
BLAST of Cla018801 vs. TrEMBL
Match: A0A0A0LWR4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G420610 PE=3 SV=1)

HSP 1 Score: 322.0 bits (824), Expect = 4.3e-85
Identity = 150/170 (88.24%), Postives = 157/170 (92.35%), Query Frame = 1 

Query: 1   MHAY-LLIPIAIFILLSSTGHTAAAPS-RSDIVLQKQFLGPHNAARFALRLAPLVWDSKL 60
           MHAY L+IPI I +LL+ST + AAAPS RSD +LQKQFL PHNAAR+ALRL+PLVWD KL
Sbjct: 1   MHAYFLIIPIPILLLLTSTPYAAAAPSIRSDRILQKQFLAPHNAARYALRLSPLVWDPKL 60

Query: 61  ARYAQSYANKRRGDCALRHSGGPYGENIFWGSGNAWTPAQAVGDWVSERKWYSYWANSCV 120
           ARYAQSYANKRRGDCALRHSGGPYGENIFWGSG  WTPAQAV DWVSERKWYSYWANSCV
Sbjct: 61  ARYAQSYANKRRGDCALRHSGGPYGENIFWGSGKDWTPAQAVADWVSERKWYSYWANSCV 120

Query: 121 EGELCGHYTQIVWRSTRRIGCARVICNDGKGVFITCNYDPPGNYIGMRPY 169
           EGELCGHYTQIVWRSTRRIGCARV CNDGKGVFITCNYDPPGNYIGMRPY
Sbjct: 121 EGELCGHYTQIVWRSTRRIGCARVTCNDGKGVFITCNYDPPGNYIGMRPY 170

[Close]
BLAST of Cla018801 vs. TrEMBL
Match: A0A061GQH8_THECC (STS14 protein, putative OS=Theobroma cacao GN=TCM_038873 PE=3 SV=1)

HSP 1 Score: 245.0 bits (624), Expect = 6.6e-62
Identity = 111/160 (69.38%), Postives = 126/160 (78.75%), Query Frame = 1 

Query: 9   IAIFILLSSTGHTAAAPSRSDIVLQKQFLGPHNAARFALRLAPLVWDSKLARYAQSYANK 68
           I +F+LL ST         + + L  QFL P NAAR A+R+ PLVWD++LARYAQ YAN+
Sbjct: 13  IIVFLLLISTTQA------NYLSLVNQFLAPQNAARAAIRVRPLVWDARLARYAQWYANQ 72

Query: 69  RRGDCALRHSGGPYGENIFWGSGNAWTPAQAVGDWVSERKWYSYWANSCVEGELCGHYTQ 128
           RR DCALRHS GPYGENIFWGSGN WTPAQA   WVSERKWY+YW+NSC  GE CGHYTQ
Sbjct: 73  RRKDCALRHSNGPYGENIFWGSGNGWTPAQAAVAWVSERKWYNYWSNSCAGGEECGHYTQ 132

Query: 129 IVWRSTRRIGCARVICNDGKGVFITCNYDPPGNYIGMRPY 169
           IVW  TRR+GCARV C+ G+GVF+TCNYDPPGNYIG RPY
Sbjct: 133 IVWSRTRRVGCARVTCDGGRGVFMTCNYDPPGNYIGERPY 166

[Close]
BLAST of Cla018801 vs. TrEMBL
Match: B9T2E4_RICCO (STS14 protein, putative OS=Ricinus communis GN=RCOM_0078380 PE=3 SV=1)

HSP 1 Score: 243.8 bits (621), Expect = 1.5e-61
Identity = 111/169 (65.68%), Postives = 130/169 (76.92%), Query Frame = 1 

Query: 6   LIPIAIFILLSSTGHTAAAPS------RSDIVLQKQFLGPHNAARFALRLAPLVWDSKLA 65
           +I I++F+   +T  +AAA S       + +    QFLGPHNAAR ALR+ PL+WD++LA
Sbjct: 11  IISISLFLTTRATQSSAAAESAIANHQHAYLSTANQFLGPHNAARAALRMPPLIWDTRLA 70

Query: 66  RYAQSYANKRRGDCALRHSGGPYGENIFWGSGNAWTPAQAVGDWVSERKWYSYWANSCVE 125
            YAQ YAN+RR DC LRHS GPYGENIFWGSG  WTPAQAV  WVSERKWY+YW+NSC  
Sbjct: 71  NYAQWYANQRRFDCDLRHSNGPYGENIFWGSGTGWTPAQAVTAWVSERKWYNYWSNSCYG 130

Query: 126 GELCGHYTQIVWRSTRRIGCARVICNDGKGVFITCNYDPPGNYIGMRPY 169
            + CGHYTQIVWR TRRIGCA+V C+D  GVF+TCNYDPPGNYIG RPY
Sbjct: 131 HQECGHYTQIVWRKTRRIGCAKVTCSDDLGVFMTCNYDPPGNYIGERPY 179

[Close]
BLAST of Cla018801 vs. TrEMBL
Match: A0A0D2P9J9_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_004G101200 PE=3 SV=1)

HSP 1 Score: 243.4 bits (620), Expect = 1.9e-61
Identity = 108/160 (67.50%), Postives = 126/160 (78.75%), Query Frame = 1 

Query: 9   IAIFILLSSTGHTAAAPSRSDIVLQKQFLGPHNAARFALRLAPLVWDSKLARYAQSYANK 68
           I + +LL ST   A     + + L  QFL P NAAR A+R+ PLVWDS+LARYAQ YAN+
Sbjct: 13  IIVSLLLVSTTQAA-----NYLSLINQFLAPQNAARVAIRMRPLVWDSRLARYAQWYANQ 72

Query: 69  RRGDCALRHSGGPYGENIFWGSGNAWTPAQAVGDWVSERKWYSYWANSCVEGELCGHYTQ 128
           RR DCALRHS GPYGENIFWGSGN WTP+QA   WVSERKWY+YW+NSC  GE CGHYTQ
Sbjct: 73  RRKDCALRHSNGPYGENIFWGSGNGWTPSQAAEAWVSERKWYNYWSNSCAGGEECGHYTQ 132

Query: 129 IVWRSTRRIGCARVICNDGKGVFITCNYDPPGNYIGMRPY 169
           +VW  T+ +GCARV+CN G+G+F+TCNYDPPGNYIG RPY
Sbjct: 133 VVWGRTKTVGCARVVCNGGRGIFMTCNYDPPGNYIGERPY 167

[Close]
BLAST of Cla018801 vs. TrEMBL
Match: C6SZJ3_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_13G094200 PE=2 SV=1)

HSP 1 Score: 237.3 bits (604), Expect = 1.4e-59
Identity = 106/168 (63.10%), Postives = 123/168 (73.21%), Query Frame = 1 

Query: 4   YLLIPIAIFILLSSTGHTAAAPSRSDIV---LQKQFLGPHNAARFALRLAPLVWDSKLAR 63
           + L   A+F+LL +T +    P+ +         QFL P NAAR  LRL PLVWDSKLA 
Sbjct: 8   HFLSCFALFLLLVATTYATVVPTTTQKPPRSFANQFLIPQNAARAVLRLRPLVWDSKLAH 67

Query: 64  YAQSYANKRRGDCALRHSGGPYGENIFWGSGNAWTPAQAVGDWVSERKWYSYWANSCVEG 123
           YAQ YAN+RR DCAL HS GPYGENIFWGSG  W PAQAV  WV ER+WY+YW NSC  G
Sbjct: 68  YAQWYANQRRNDCALEHSNGPYGENIFWGSGTGWKPAQAVSAWVEERQWYNYWHNSCANG 127

Query: 124 ELCGHYTQIVWRSTRRIGCARVICNDGKGVFITCNYDPPGNYIGMRPY 169
           ++CGHYTQIVW +TR+IGCA V+C+ GKG F+TCNYDPPGNY G RPY
Sbjct: 128 QMCGHYTQIVWSTTRKIGCASVVCSGGKGTFMTCNYDPPGNYYGERPY 175

[Close]
BLAST of Cla018801 vs. NCBI nr
Match: gi|659107363|ref|XP_008453637.1| (PREDICTED: pathogenesis-related protein PR-1 [Cucumis melo])

HSP 1 Score: 324.7 bits (831), Expect = 9.5e-86
Identity = 153/171 (89.47%), Postives = 159/171 (92.98%), Query Frame = 1 

Query: 1   MHAYLLI--PIA-IFILLSSTGHTAAAPSRSDIVLQKQFLGPHNAARFALRLAPLVWDSK 60
           MHA+ LI  PIA I +LL+STG TAAA SRSD +LQKQFLGPHNAAR+ALRL+PLVWDSK
Sbjct: 1   MHAHFLIIIPIATILLLLTSTGCTAAARSRSDRILQKQFLGPHNAARYALRLSPLVWDSK 60

Query: 61  LARYAQSYANKRRGDCALRHSGGPYGENIFWGSGNAWTPAQAVGDWVSERKWYSYWANSC 120
           LARYAQ YANKRRGDCALRHSGGPYGENIFWGSGN WTPAQAV DWVSERKWYSYWANSC
Sbjct: 61  LARYAQWYANKRRGDCALRHSGGPYGENIFWGSGNEWTPAQAVADWVSERKWYSYWANSC 120

Query: 121 VEGELCGHYTQIVWRSTRRIGCARVICNDGKGVFITCNYDPPGNYIGMRPY 169
           VEGELCGHYTQIVWRSTRRIGCARV CNDGKGVFITCNYDPPGNYIGMRPY
Sbjct: 121 VEGELCGHYTQIVWRSTRRIGCARVTCNDGKGVFITCNYDPPGNYIGMRPY 171

[Close]
BLAST of Cla018801 vs. NCBI nr
Match: gi|449457129|ref|XP_004146301.1| (PREDICTED: pathogenesis-related protein PR-1-like [Cucumis sativus])

HSP 1 Score: 322.0 bits (824), Expect = 6.1e-85
Identity = 150/170 (88.24%), Postives = 157/170 (92.35%), Query Frame = 1 

Query: 1   MHAY-LLIPIAIFILLSSTGHTAAAPS-RSDIVLQKQFLGPHNAARFALRLAPLVWDSKL 60
           MHAY L+IPI I +LL+ST + AAAPS RSD +LQKQFL PHNAAR+ALRL+PLVWD KL
Sbjct: 1   MHAYFLIIPIPILLLLTSTPYAAAAPSIRSDRILQKQFLAPHNAARYALRLSPLVWDPKL 60

Query: 61  ARYAQSYANKRRGDCALRHSGGPYGENIFWGSGNAWTPAQAVGDWVSERKWYSYWANSCV 120
           ARYAQSYANKRRGDCALRHSGGPYGENIFWGSG  WTPAQAV DWVSERKWYSYWANSCV
Sbjct: 61  ARYAQSYANKRRGDCALRHSGGPYGENIFWGSGKDWTPAQAVADWVSERKWYSYWANSCV 120

Query: 121 EGELCGHYTQIVWRSTRRIGCARVICNDGKGVFITCNYDPPGNYIGMRPY 169
           EGELCGHYTQIVWRSTRRIGCARV CNDGKGVFITCNYDPPGNYIGMRPY
Sbjct: 121 EGELCGHYTQIVWRSTRRIGCARVTCNDGKGVFITCNYDPPGNYIGMRPY 170

[Close]
BLAST of Cla018801 vs. NCBI nr
Match: gi|1009105492|ref|XP_015875903.1| (PREDICTED: pathogenesis-related protein PR-1 [Ziziphus jujuba])

HSP 1 Score: 246.1 bits (627), Expect = 4.3e-62
Identity = 112/168 (66.67%), Postives = 126/168 (75.00%), Query Frame = 1 

Query: 1   MHAYLLIPIAIFILLSSTGHTAAAPSRSDIVLQKQFLGPHNAARFALRLAPLVWDSKLAR 60
           MH  +       +L+S+T   A       + L  QFL P NAAR  LR+ PLVWD +LAR
Sbjct: 1   MHTTITTFFVFLVLISATD--AFTKQNQYLNLANQFLAPQNAARSTLRMKPLVWDPRLAR 60

Query: 61  YAQSYANKRRGDCALRHSGGPYGENIFWGSGNAWTPAQAVGDWVSERKWYSYWANSCVEG 120
           YAQ YAN+RR DCAL+HS GPYGENIFWGSG+ WTPAQAV  WVSERKWY+YW+NSC   
Sbjct: 61  YAQGYANQRRNDCALKHSKGPYGENIFWGSGDEWTPAQAVTAWVSERKWYNYWSNSCAGN 120

Query: 121 ELCGHYTQIVWRSTRRIGCARVICNDGKGVFITCNYDPPGNYIGMRPY 169
           E CGHYTQIVWRST R+GCARV C+ GKGVFITCNYDPPGNYIG RPY
Sbjct: 121 EQCGHYTQIVWRSTSRVGCARVTCSRGKGVFITCNYDPPGNYIGERPY 166

[Close]
BLAST of Cla018801 vs. NCBI nr
Match: gi|590580677|ref|XP_007014137.1| (STS14 protein, putative [Theobroma cacao])

HSP 1 Score: 245.0 bits (624), Expect = 9.5e-62
Identity = 111/160 (69.38%), Postives = 126/160 (78.75%), Query Frame = 1 

Query: 9   IAIFILLSSTGHTAAAPSRSDIVLQKQFLGPHNAARFALRLAPLVWDSKLARYAQSYANK 68
           I +F+LL ST         + + L  QFL P NAAR A+R+ PLVWD++LARYAQ YAN+
Sbjct: 13  IIVFLLLISTTQA------NYLSLVNQFLAPQNAARAAIRVRPLVWDARLARYAQWYANQ 72

Query: 69  RRGDCALRHSGGPYGENIFWGSGNAWTPAQAVGDWVSERKWYSYWANSCVEGELCGHYTQ 128
           RR DCALRHS GPYGENIFWGSGN WTPAQA   WVSERKWY+YW+NSC  GE CGHYTQ
Sbjct: 73  RRKDCALRHSNGPYGENIFWGSGNGWTPAQAAVAWVSERKWYNYWSNSCAGGEECGHYTQ 132

Query: 129 IVWRSTRRIGCARVICNDGKGVFITCNYDPPGNYIGMRPY 169
           IVW  TRR+GCARV C+ G+GVF+TCNYDPPGNYIG RPY
Sbjct: 133 IVWSRTRRVGCARVTCDGGRGVFMTCNYDPPGNYIGERPY 166

[Close]
BLAST of Cla018801 vs. NCBI nr
Match: gi|255583299|ref|XP_002532413.1| (PREDICTED: pathogenesis-related protein PR-1 [Ricinus communis])

HSP 1 Score: 243.8 bits (621), Expect = 2.1e-61
Identity = 111/169 (65.68%), Postives = 130/169 (76.92%), Query Frame = 1 

Query: 6   LIPIAIFILLSSTGHTAAAPS------RSDIVLQKQFLGPHNAARFALRLAPLVWDSKLA 65
           +I I++F+   +T  +AAA S       + +    QFLGPHNAAR ALR+ PL+WD++LA
Sbjct: 11  IISISLFLTTRATQSSAAAESAIANHQHAYLSTANQFLGPHNAARAALRMPPLIWDTRLA 70

Query: 66  RYAQSYANKRRGDCALRHSGGPYGENIFWGSGNAWTPAQAVGDWVSERKWYSYWANSCVE 125
            YAQ YAN+RR DC LRHS GPYGENIFWGSG  WTPAQAV  WVSERKWY+YW+NSC  
Sbjct: 71  NYAQWYANQRRFDCDLRHSNGPYGENIFWGSGTGWTPAQAVTAWVSERKWYNYWSNSCYG 130

Query: 126 GELCGHYTQIVWRSTRRIGCARVICNDGKGVFITCNYDPPGNYIGMRPY 169
            + CGHYTQIVWR TRRIGCA+V C+D  GVF+TCNYDPPGNYIG RPY
Sbjct: 131 HQECGHYTQIVWRKTRRIGCAKVTCSDDLGVFMTCNYDPPGNYIGERPY 179

The following BLAST results are available for this feature:
BLAST of Cla018801 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PR1_MEDTR9.2e-5760.87Pathogenesis-related protein PR-1 OS=Medicago truncatula GN=PR-1 PE=2 SV=1[more]
PRMS_MAIZE1.7e-4753.70Pathogenesis-related protein PRMS OS=Zea mays GN=PRMS PE=2 SV=1[more]
PR12_HORVU8.7e-4757.35Pathogenesis-related protein PRB1-2 OS=Hordeum vulgare PE=2 SV=1[more]
PR1_HORVU8.7e-4758.09Pathogenesis-related protein 1 OS=Hordeum vulgare PE=2 SV=1[more]
PR13_HORVU1.1e-4657.35Pathogenesis-related protein PRB1-3 OS=Hordeum vulgare PE=2 SV=1[more]
BLAST of Cla018801 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LWR4_CUCSA4.3e-8588.24Uncharacterized protein OS=Cucumis sativus GN=Csa_1G420610 PE=3 SV=1[more]
A0A061GQH8_THECC6.6e-6269.38STS14 protein, putative OS=Theobroma cacao GN=TCM_038873 PE=3 SV=1[more]
B9T2E4_RICCO1.5e-6165.68STS14 protein, putative OS=Ricinus communis GN=RCOM_0078380 PE=3 SV=1[more]
A0A0D2P9J9_GOSRA1.9e-6167.50Uncharacterized protein OS=Gossypium raimondii GN=B456_004G101200 PE=3 SV=1[more]
C6SZJ3_SOYBN1.4e-5963.10Uncharacterized protein OS=Glycine max GN=GLYMA_13G094200 PE=2 SV=1[more]
BLAST of Cla018801 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659107363|ref|XP_008453637.1|9.5e-8689.47PREDICTED: pathogenesis-related protein PR-1 [Cucumis melo][more]
gi|449457129|ref|XP_004146301.1|6.1e-8588.24PREDICTED: pathogenesis-related protein PR-1-like [Cucumis sativus][more]
gi|1009105492|ref|XP_015875903.1|4.3e-6266.67PREDICTED: pathogenesis-related protein PR-1 [Ziziphus jujuba][more]
gi|590580677|ref|XP_007014137.1|9.5e-6269.38STS14 protein, putative [Theobroma cacao][more]
gi|255583299|ref|XP_002532413.1|2.1e-6165.68PREDICTED: pathogenesis-related protein PR-1 [Ricinus communis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001283Allrgn_V5/Tpx1
IPR002413V5_allergen
IPR014044CAP_domain
IPR018244Allrgn_V5/Tpx1_CS
Vocabulary: Cellular Component
TermDefinition
GO:0005576extracellular region
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005576 extracellular region
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla018801Cla018801.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001283Cysteine-rich secretory protein, allergen V5/Tpx-1-relatedPRINTSPR00837V5TPXLIKEcoord: 123..139
score: 3.8E-20coord: 151..164
score: 3.8E-20coord: 99..112
score: 3.8E-20coord: 52..70
score: 3.8
IPR001283Cysteine-rich secretory protein, allergen V5/Tpx-1-relatedPANTHERPTHR10334CYSTEINE-RICH SECRETORY PROTEIN-RELATEDcoord: 9..168
score: 4.3
IPR002413Ves allergenPRINTSPR00838V5ALLERGENcoord: 52..70
score: 9.6E-7coord: 122..141
score: 9.
IPR014044CAP domainGENE3DG3DSA:3.40.33.10coord: 23..168
score: 5.8
IPR014044CAP domainPFAMPF00188CAPcoord: 39..156
score: 1.9
IPR014044CAP domainSMARTSM00198SCP_3coord: 31..164
score: 5.9
IPR014044CAP domainunknownSSF55797PR-1-likecoord: 10..168
score: 2.22
IPR018244Allergen V5/Tpx-1-related, conserved sitePROSITEPS01009CRISP_1coord: 124..134
scor
IPR018244Allergen V5/Tpx-1-related, conserved sitePROSITEPS01010CRISP_2coord: 151..162
scor
NoneNo IPR availablePANTHERPTHR10334:SF204ALLERGEN V5/TPX-1-RELATED FAMILY PROTEIN-RELATEDcoord: 9..168
score: 4.3

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cla018801Wax gourdwgowmB156
Cla018801Wax gourdwgowmB153
Cla018801Wax gourdwgowmB684
Cla018801Watermelon (97103) v1wmwmB164
Cla018801Watermelon (97103) v1wmwmB166
Cla018801Cucumber (Gy14) v1cgywmB107
Cla018801Cucumber (Gy14) v1cgywmB110
Cla018801Cucumber (Gy14) v1cgywmB111
Cla018801Cucurbita maxima (Rimu)cmawmB071
Cla018801Cucurbita maxima (Rimu)cmawmB143
Cla018801Cucurbita moschata (Rifu)cmowmB063
Cla018801Cucurbita moschata (Rifu)cmowmB128
Cla018801Melon (DHL92) v3.5.1mewmB289
Cla018801Melon (DHL92) v3.5.1mewmB435
Cla018801Melon (DHL92) v3.5.1mewmB441
Cla018801Watermelon (Charleston Gray)wcgwmB114
Cla018801Watermelon (Charleston Gray)wcgwmB344
Cla018801Cucumber (Chinese Long) v2cuwmB079
Cla018801Cucumber (Chinese Long) v2cuwmB169
Cla018801Cucumber (Chinese Long) v2cuwmB176
Cla018801Cucurbita pepo (Zucchini)cpewmB372
Cla018801Cucurbita pepo (Zucchini)cpewmB679
Cla018801Bottle gourd (USVL1VR-Ls)lsiwmB121
Cla018801Bottle gourd (USVL1VR-Ls)lsiwmB124
Cla018801Bottle gourd (USVL1VR-Ls)lsiwmB416
Cla018801Cucumber (Gy14) v2cgybwmB080
Cla018801Cucumber (Gy14) v2cgybwmB160
Cla018801Cucumber (Gy14) v2cgybwmB167
Cla018801Melon (DHL92) v3.6.1medwmB283
Cla018801Melon (DHL92) v3.6.1medwmB427
Cla018801Silver-seed gourdcarwmB0789
Cla018801Cucumber (Chinese Long) v3cucwmB092
Cla018801Cucumber (Chinese Long) v3cucwmB182
Cla018801Cucumber (Chinese Long) v3cucwmB188
Cla018801Watermelon (97103) v2wmwmbB391
Cla018801Watermelon (97103) v2wmwmbB392
Cla018801Watermelon (97103) v2wmwmbB406