Cla013517.1 (mRNA) Watermelon (97103) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla013517
Type	mRNA
Organism	Citrullus. lanatus (Watermelon (97103) v1)
Description	Small ubiquitin-related modifier 2 (AHRD V1 ***- F4K3D6_ARATH); contains Interpro domain(s) IPR000626 Ubiquitin
Location	Chr2 : 28489760 .. 28491852 (-)
Sequence length	303

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGGGGGTCACAAACACGCAGCAGGAGGAAGACAAGAAGCCCAACGACCAGTCGGCGCATATCAACCTGAAGGTCAAAGGCCAGGTTGGTTTCTTTCTTGAGAAATTAAGTTCGTGCTTGAACCTTTTTAATGCTGATGTTTCTTTCATTTGATTTTGATCGCTTGACCTTTTCTGGCTTCTGATCTTTTCTTTCTCTTTTGGATATGTCGGTTAGGCAGCAGGCACCCAAGTAGTAGTATAAATTCTAGGCTTGTGGGGTTTTATTATTGAATCGGTTTTTGGTTGTTCGCGAAATTTGAAGTCCGAAAAAAGGGAAGAAATGGTTAATTGTTTTGAAATTGGAGTTATATGTGACAGGTGCGATAGTTATATTTTGCAATTATAATCTTTCTAAAACTTTCCCTCTGAGAATCTTGCAAATCAAATTAAGTGAAGGGTGGAATTCTTGTTTCCATGTTTGTGTTATATTTGCAGTTCTTTTACGCATTTGGACTGTTCCATTTTTTTCTTTCTGTTTGTTATACTCACTCTGGGGAACAAAATCCTGTCGTAGCTTTGATTGATCTCTTGGAAAAGATTTCGAAGCTGCCCTGCTGTTATAAACTACTATCTGGAATACAAGACTGAGTGTTGGTCCTCCCGTCATGTCCCAGATAAGCTAGTGATTCTTTGATGTCCTAATATACTTTTCTTGGGATGGATTTTGCTGGGATTATTGAGTTTTGGGTCTATTGACTACAGATTGACCTTTTGATTCTTTTGAATAGCGCTTTAGGTGTGTTTGTTTAGAATGAATACTAAATCAGTTGTGGGGTTTCTGTGAATTATGGTAGTTTTCTTTTGTTCATTTTGTTGAAATCTATTACGAAATAATCTTCTTCTTCCTTCTGCCTTTTTCTTTTTCTTTTTCTTTTTCCTTTTTCTTAATGTCACTTCCAATGAAGTAGTCTTGATGTATTTTAAAGATTCCAATATATGTGTTTTCAACCAAGCCTTAAAAAATAGAAAGGATATTTTAAGCTCCTATAGTTTCAGTTGAGCCACTTTATTATATTAAATAATAAGAATTGTACTGTAAAACCTGCCACATGCCGAAGTAAGTCTGTCAGCCATCTAAATAGTTTATATACCATGGAAATGTACATTTGTGCGGTCTGTTTTTTTTTTTTTTTTTTAGAAAGAAAGAAAAAAAAAAACCTTGATACAAATGATACAAATGATGATGATTTAATTGGAGGACTTGTTTAATCTATAAATTAAGTTTTTTTTTTTTTTAATTAAGGCAAGGAAGGGCATGGAGATTGAAGTGTTTATGAATGTTTTAGCTCCATTTCTGTCTCAATCTGTCCTGGAGTGCTTGATCCAATCTTTTTTCTTGTTTCATTGCGATTTTCTAGGGACTGAACCAAATGCTTAGCTCCATTTCTTGTTCTGACATACGTCTCAGTTTCTTTTTTCTTCTTTGTTTCACTTTATCTTTTACCGTTTCCTTTCAACCTCTTTCTTCTTTATCACGTTCTTCCTGCAATTATCAAACTCCTTTTTCCTTTTCGTTTCTTGTTGTTAATTACACCAATTAGTTGGTTAGAAATATGGTTCGGGAGCGTGATGTTTTTCTTGATCTCTTCCTGCAGTGTGGGATTCCTGTTGTAGCCTTATTTTTTGTACCCTTTAGTACATTCTTTCATTTTCTCAATAAAAGCTCAGTTTTTCACCAAAAAAATTATGAGTTTATATTCATGAAAGACTAACCCCTTAGTCCTCAATTTTTATTTACTTTAGGACGGAAATGAGGTGTTCTTCAGGATTAAAAGGAGCACTCAGCTGAAGAAACTAATGAATGCTTACTGTGATCGACAATCTGTGGATCTGAACTCCATTGCTTTTCTATTCGACGGACGTCGTCTTCGAGCAGAGCAAACCCCCGATGAGGTAATCCTTTTCTCTTATTATTTAAGCAATCCTATGCTAAATTCATGTATTTTTTCTTTTTTTTTTAATAAAAGCATGTACTTTTACCAGCTAGAGATGGAGGATGGGGATGAGATAGATGCAATGTTGCACCAGACTGGTGGATCTACTCGTTGA

mRNA sequence

ATGTCGGGGGTCACAAACACGCAGCAGGAGGAAGACAAGAAGCCCAACGACCAGTCGGCGCATATCAACCTGAAGGTCAAAGGCCAGGACGGAAATGAGGTGTTCTTCAGGATTAAAAGGAGCACTCAGCTGAAGAAACTAATGAATGCTTACTGTGATCGACAATCTGTGGATCTGAACTCCATTGCTTTTCTATTCGACGGACGTCGTCTTCGAGCAGAGCAAACCCCCGATGAGCTAGAGATGGAGGATGGGGATGAGATAGATGCAATGTTGCACCAGACTGGTGGATCTACTCGTTGA

Coding sequence (CDS)

ATGTCGGGGGTCACAAACACGCAGCAGGAGGAAGACAAGAAGCCCAACGACCAGTCGGCGCATATCAACCTGAAGGTCAAAGGCCAGGACGGAAATGAGGTGTTCTTCAGGATTAAAAGGAGCACTCAGCTGAAGAAACTAATGAATGCTTACTGTGATCGACAATCTGTGGATCTGAACTCCATTGCTTTTCTATTCGACGGACGTCGTCTTCGAGCAGAGCAAACCCCCGATGAGCTAGAGATGGAGGATGGGGATGAGATAGATGCAATGTTGCACCAGACTGGTGGATCTACTCGTTGA

Protein sequence

MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSTR

Homology

[Close]

BLAST of Cla013517 vs. Swiss-Prot
Match: SUMO1_ARATH (Small ubiquitin-related modifier 1 OS=Arabidopsis thaliana GN=SUMO1 PE=1 SV=2)

HSP 1 Score: 176.0 bits (445), Expect = 2.0e-43
Identity = 85/93 (91.40%), Postives = 86/93 (92.47%), Query Frame = 1


Query: 6  NTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFL 65
          +  QEEDKKP D  AHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVD+NSIAFL
Sbjct: 2  SANQEEDKKPGDGGAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDMNSIAFL 61

Query: 66 FDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGS 99
          FDGRRLRAEQTPDEL+MEDGDEIDAMLHQTGGS
Sbjct: 62 FDGRRLRAEQTPDELDMEDGDEIDAMLHQTGGS 94

[Close]

BLAST of Cla013517 vs. Swiss-Prot
Match: SUMO2_ARATH (Small ubiquitin-related modifier 2 OS=Arabidopsis thaliana GN=SUMO2 PE=1 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 5.0e-42
Identity = 85/91 (93.41%), Postives = 84/91 (92.31%), Query Frame = 1


Query: 10  EEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGR 69
           EEDKKP DQ AHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVD NSIAFLFDGR
Sbjct: 6   EEDKKP-DQGAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDFNSIAFLFDGR 65

Query: 70  RLRAEQTPDELEMEDGDEIDAMLHQTGGSTR 101
           RLRAEQTPDELEMEDGDEIDAMLHQTGG  +
Sbjct: 66  RLRAEQTPDELEMEDGDEIDAMLHQTGGGAK 95

[Close]

BLAST of Cla013517 vs. Swiss-Prot
Match: SUMO1_ORYSJ (Small ubiquitin-related modifier 1 OS=Oryza sativa subsp. japonica GN=SUMO1 PE=1 SV=1)

HSP 1 Score: 162.5 bits (410), Expect = 2.3e-39
Identity = 81/91 (89.01%), Postives = 81/91 (89.01%), Query Frame = 1


Query: 10 EEDKKP---NDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLF 69
          EEDKKP       AHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVD+N+IAFLF
Sbjct: 6  EEDKKPAGGEGGGAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDMNAIAFLF 65

Query: 70 DGRRLRAEQTPDELEMEDGDEIDAMLHQTGG 98
          DGRRLR EQTPDELEMEDGDEIDAMLHQTGG
Sbjct: 66 DGRRLRGEQTPDELEMEDGDEIDAMLHQTGG 96

[Close]

BLAST of Cla013517 vs. Swiss-Prot
Match: PMT3_SCHPO (Ubiquitin-like protein pmt3/smt3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=pmt3 PE=1 SV=2)

HSP 1 Score: 112.1 bits (279), Expect = 3.6e-24
Identity = 53/95 (55.79%), Postives = 67/95 (70.53%), Query Frame = 1


Query: 5   TNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAF 64
           T    ++D KP+ +  HINLKV GQD NEVFF+IK++T+  KLM  YC RQ   +NS+ F
Sbjct: 21  TGDTSQQDVKPSTE--HINLKVVGQDNNEVFFKIKKTTEFSKLMKIYCARQGKSMNSLRF 80

Query: 65  LFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGST 100
           L DG R+R +QTP EL+MEDGD+I+A+L Q GG T
Sbjct: 81  LVDGERIRPDQTPAELDMEDGDQIEAVLEQLGGCT 113

[Close]

BLAST of Cla013517 vs. Swiss-Prot
Match: SUMO3_ARATH (Small ubiquitin-related modifier 3 OS=Arabidopsis thaliana GN=SUMO3 PE=1 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 2.4e-20
Identity = 49/89 (55.06%), Postives = 63/89 (70.79%), Query Frame = 1


Query: 11 EDKKPNDQS--AHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDG 70
          +D KP DQ   AH+ LKVK QDG+EV F+ K+S  LKKLM  YCDR+ + L++ AF+F+G
Sbjct: 5  QDDKPIDQEQEAHVILKVKSQDGDEVLFKNKKSAPLKKLMYVYCDRRGLKLDAFAFIFNG 64

Query: 71 RRLRAEQTPDELEMEDGDEIDAMLHQTGG 98
           R+   +TPDEL+MEDGD IDA    +GG
Sbjct: 65 ARIGGLETPDELDMEDGDVIDACRAMSGG 93

[Close]

BLAST of Cla013517 vs. TrEMBL
Match: A0A0A0KDV8_CUCSA (Small ubiquitin-related modifier OS=Cucumis sativus GN=Csa_6G157680 PE=3 SV=1)

HSP 1 Score: 203.4 bits (516), Expect = 1.3e-49
Identity = 100/100 (100.00%), Postives = 100/100 (100.00%), Query Frame = 1


Query: 1   MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN 60
           MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN
Sbjct: 1   MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN 60

Query: 61  SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSTR 101
           SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSTR
Sbjct: 61  SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSTR 100

[Close]

BLAST of Cla013517 vs. TrEMBL
Match: V4U4M1_9ROSI (Small ubiquitin-related modifier OS=Citrus clementina GN=CICLE_v10017283mg PE=3 SV=1)

HSP 1 Score: 192.6 bits (488), Expect = 2.3e-46
Identity = 94/97 (96.91%), Postives = 95/97 (97.94%), Query Frame = 1


Query: 1  MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN 60
          MSGVTNT QEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSV+LN
Sbjct: 1  MSGVTNTPQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVELN 60

Query: 61 SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGG 98
          SIAFLFDGRRLR EQTPDELEMEDGDEIDAMLHQTGG
Sbjct: 61 SIAFLFDGRRLRGEQTPDELEMEDGDEIDAMLHQTGG 97

[Close]

BLAST of Cla013517 vs. TrEMBL
Match: V7BPK6_PHAVU (Small ubiquitin-related modifier OS=Phaseolus vulgaris GN=PHAVU_006G047600g PE=3 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 9.8e-45
Identity = 91/98 (92.86%), Postives = 93/98 (94.90%), Query Frame = 1


Query: 1  MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN 60
          MSGVTN   EEDKKP++Q AHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVD N
Sbjct: 1  MSGVTNNNNEEDKKPSEQGAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDFN 60

Query: 61 SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGS 99
          SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGS
Sbjct: 61 SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGS 98

[Close]

BLAST of Cla013517 vs. TrEMBL
Match: B9IAK0_POPTR (Small ubiquitin-related modifier OS=Populus trichocarpa GN=POPTR_0014s15650g PE=3 SV=1)

HSP 1 Score: 186.0 bits (471), Expect = 2.2e-44
Identity = 90/100 (90.00%), Postives = 94/100 (94.00%), Query Frame = 1


Query: 1   MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN 60
           MSGVT   QEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSV+ N
Sbjct: 1   MSGVTGQPQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVEFN 60

Query: 61  SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSTR 101
           SIAFLFDGRRLR EQTPDEL+MEDGDEIDAMLHQTGG+ +
Sbjct: 61  SIAFLFDGRRLRGEQTPDELDMEDGDEIDAMLHQTGGAMK 100

[Close]

BLAST of Cla013517 vs. TrEMBL
Match: A0A0A0L2Y3_CUCSA (Small ubiquitin-related modifier OS=Cucumis sativus GN=Csa_3G073930 PE=3 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 3.7e-44
Identity = 93/97 (95.88%), Postives = 94/97 (96.91%), Query Frame = 1


Query: 1  MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN 60
          MSGVTN  QEEDKKP DQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN
Sbjct: 1  MSGVTN--QEEDKKPTDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN 60

Query: 61 SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGG 98
          SIAFLFDGRRLRAEQTP+ELEMEDGDEIDAMLHQTGG
Sbjct: 61 SIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGG 95

[Close]

BLAST of Cla013517 vs. NCBI nr
Match: gi|449466075|ref|XP_004150752.1| (PREDICTED: small ubiquitin-related modifier 1 [Cucumis sativus])

HSP 1 Score: 203.4 bits (516), Expect = 1.9e-49
Identity = 100/100 (100.00%), Postives = 100/100 (100.00%), Query Frame = 1


Query: 1   MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN 60
           MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN
Sbjct: 1   MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN 60

Query: 61  SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSTR 101
           SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSTR
Sbjct: 61  SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSTR 100

[Close]

BLAST of Cla013517 vs. NCBI nr
Match: gi|659113027|ref|XP_008456407.1| (PREDICTED: small ubiquitin-related modifier 1 [Cucumis melo])

HSP 1 Score: 201.8 bits (512), Expect = 5.5e-49
Identity = 99/100 (99.00%), Postives = 100/100 (100.00%), Query Frame = 1


Query: 1   MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN 60
           MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN
Sbjct: 1   MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN 60

Query: 61  SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSTR 101
           SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGS+R
Sbjct: 61  SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSSR 100

[Close]

BLAST of Cla013517 vs. NCBI nr
Match: gi|567910657|ref|XP_006447642.1| (hypothetical protein CICLE_v10017283mg [Citrus clementina])

HSP 1 Score: 192.6 bits (488), Expect = 3.3e-46
Identity = 94/97 (96.91%), Postives = 95/97 (97.94%), Query Frame = 1


Query: 1  MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN 60
          MSGVTNT QEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSV+LN
Sbjct: 1  MSGVTNTPQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVELN 60

Query: 61 SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGG 98
          SIAFLFDGRRLR EQTPDELEMEDGDEIDAMLHQTGG
Sbjct: 61 SIAFLFDGRRLRGEQTPDELEMEDGDEIDAMLHQTGG 97

[Close]

BLAST of Cla013517 vs. NCBI nr
Match: gi|470136628|ref|XP_004304088.1| (PREDICTED: small ubiquitin-related modifier 1-like [Fragaria vesca subsp. vesca])

HSP 1 Score: 187.2 bits (474), Expect = 1.4e-44
Identity = 91/100 (91.00%), Postives = 95/100 (95.00%), Query Frame = 1


Query: 1   MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN 60
           MSGV +  QEEDKKPNDQ AHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSV+LN
Sbjct: 1   MSGVASQPQEEDKKPNDQGAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVELN 60

Query: 61  SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSTR 101
           SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGG+ +
Sbjct: 61  SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGAAQ 100

[Close]

BLAST of Cla013517 vs. NCBI nr
Match: gi|593691938|ref|XP_007146517.1| (hypothetical protein PHAVU_006G047600g [Phaseolus vulgaris])

HSP 1 Score: 187.2 bits (474), Expect = 1.4e-44
Identity = 91/98 (92.86%), Postives = 93/98 (94.90%), Query Frame = 1


Query: 1  MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN 60
          MSGVTN   EEDKKP++Q AHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVD N
Sbjct: 1  MSGVTNNNNEEDKKPSEQGAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDFN 60

Query: 61 SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGS 99
          SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGS
Sbjct: 61 SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGS 98

The following BLAST results are available for this feature:

BLAST of Cla013517 vs. Swiss-Prot


Match Name	E-value	Identity	Description
SUMO1_ARATH	2.0e-43	91.40	Small ubiquitin-related modifier 1 OS=Arabidopsis thaliana GN=SUMO1 PE=1 SV=2	[more]
SUMO2_ARATH	5.0e-42	93.41	Small ubiquitin-related modifier 2 OS=Arabidopsis thaliana GN=SUMO2 PE=1 SV=1	[more]
SUMO1_ORYSJ	2.3e-39	89.01	Small ubiquitin-related modifier 1 OS=Oryza sativa subsp. japonica GN=SUMO1 PE=1...	[more]
PMT3_SCHPO	3.6e-24	55.79	Ubiquitin-like protein pmt3/smt3 OS=Schizosaccharomyces pombe (strain 972 / ATCC...	[more]
SUMO3_ARATH	2.4e-20	55.06	Small ubiquitin-related modifier 3 OS=Arabidopsis thaliana GN=SUMO3 PE=1 SV=1	[more]

BLAST of Cla013517 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KDV8_CUCSA	1.3e-49	100.00	Small ubiquitin-related modifier OS=Cucumis sativus GN=Csa_6G157680 PE=3 SV=1	[more]
V4U4M1_9ROSI	2.3e-46	96.91	Small ubiquitin-related modifier OS=Citrus clementina GN=CICLE_v10017283mg PE=3 ...	[more]
V7BPK6_PHAVU	9.8e-45	92.86	Small ubiquitin-related modifier OS=Phaseolus vulgaris GN=PHAVU_006G047600g PE=3...	[more]
B9IAK0_POPTR	2.2e-44	90.00	Small ubiquitin-related modifier OS=Populus trichocarpa GN=POPTR_0014s15650g PE=...	[more]
A0A0A0L2Y3_CUCSA	3.7e-44	95.88	Small ubiquitin-related modifier OS=Cucumis sativus GN=Csa_3G073930 PE=3 SV=1	[more]

BLAST of Cla013517 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449466075\|ref\|XP_004150752.1\|	1.9e-49	100.00	PREDICTED: small ubiquitin-related modifier 1 [Cucumis sativus]	[more]
gi\|659113027\|ref\|XP_008456407.1\|	5.5e-49	99.00	PREDICTED: small ubiquitin-related modifier 1 [Cucumis melo]	[more]
gi\|567910657\|ref\|XP_006447642.1\|	3.3e-46	96.91	hypothetical protein CICLE_v10017283mg [Citrus clementina]	[more]
gi\|470136628\|ref\|XP_004304088.1\|	1.4e-44	91.00	PREDICTED: small ubiquitin-related modifier 1-like [Fragaria vesca subsp. vesca]	[more]
gi\|593691938\|ref\|XP_007146517.1\|	1.4e-44	92.86	hypothetical protein PHAVU_006G047600g [Phaseolus vulgaris]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR000626	Ubiquitin_dom
IPR022617	Rad60/SUMO-like_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005515	protein binding

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cla013517	Cla013517	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cla013517	Cla013517.1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cla013517.1.cds3	Cla013517.1.cds3	CDS
Cla013517.1.cds2	Cla013517.1.cds2	CDS
Cla013517.1.cds1	Cla013517.1.cds1	CDS

InterPro

Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000626	Ubiquitin domain	SMART	SM00213	ubq_7	coord: 22..93 score: 2.5
IPR000626	Ubiquitin domain	PROFILE	PS50053	UBIQUITIN_2	coord: 20..97 score: 15
IPR022617	Rad60/SUMO-like domain	PFAM	PF11976	Rad60-SLD	coord: 22..92 score: 6.5
None	No IPR available	GENE3D	G3DSA:3.10.20.90		coord: 13..97 score: 3.6
None	No IPR available	PANTHER	PTHR10562	SMALL UBIQUITIN-RELATED MODIFIER	coord: 7..100 score: 5.2
None	No IPR available	PANTHER	PTHR10562:SF26	SUBFAMILY NOT NAMED	coord: 7..100 score: 5.2