Cla010959.1 (mRNA) Watermelon (97103) v1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCATCTAAAGAAAATGCTTCTAAAGCTTCAAGCGACATTGTCAGAAGATCGATTACTCACAACCGCTCCAAGGAAATACAATTGGAAGAGCAACCTACCTTTGAGATCACGAGAAATATATGGGAGCGGATCTCCAAGAACCCAAAAGCTGGGGTCGTCATTAAAGAAAATTCTACCCTTGACAGGCATACCTCAGCTTCTGAACAATCAAGTGAGGAGGCATCCCACCCAAATGTAATGTCAGTCATGATGGCTGACGTGGGAACAAGTGAGGAGAAAATGGTTGAGCTTGCAAAGAAAGTTAACATGCTACTAAAGCCAGTTGAAAAAAGGGATTATGAGATTGCATCCCTCAAGAATCATATCGAAAGTCGTGACGCAGCTGAATCAAGTCATACACTCACAATCAAGAATAATGACAAAGGGAAAAAGATTTTGCAAGACAGTCAGCCCCAAGATTCAACTTCAAACTCCATCAAAGCTCCATATTAA ATGGCATCTAAAGAAAATGCTTCTAAAGCTTCAAGCGACATTGTCAGAAGATCGATTACTCACAACCGCTCCAAGGAAATACAATTGGAAGAGCAACCTACCTTTGAGATCACGAGAAATATATGGGAGCGGATCTCCAAGAACCCAAAAGCTGGGGTCGTCATTAAAGAAAATTCTACCCTTGACAGGCATACCTCAGCTTCTGAACAATCAAGTGAGGAGGCATCCCACCCAAATGTAATGTCAGTCATGATGGCTGACGTGGGAACAAGTGAGGAGAAAATGGTTGAGCTTGCAAAGAAAGTTAACATGCTACTAAAGCCAGTTGAAAAAAGGGATTATGAGATTGCATCCCTCAAGAATCATATCGAAAGTCGTGACGCAGCTGAATCAAGTCATACACTCACAATCAAGAATAATGACAAAGGGAAAAAGATTTTGCAAGACAGTCAGCCCCAAGATTCAACTTCAAACTCCATCAAAGCTCCATATTAA ATGGCATCTAAAGAAAATGCTTCTAAAGCTTCAAGCGACATTGTCAGAAGATCGATTACTCACAACCGCTCCAAGGAAATACAATTGGAAGAGCAACCTACCTTTGAGATCACGAGAAATATATGGGAGCGGATCTCCAAGAACCCAAAAGCTGGGGTCGTCATTAAAGAAAATTCTACCCTTGACAGGCATACCTCAGCTTCTGAACAATCAAGTGAGGAGGCATCCCACCCAAATGTAATGTCAGTCATGATGGCTGACGTGGGAACAAGTGAGGAGAAAATGGTTGAGCTTGCAAAGAAAGTTAACATGCTACTAAAGCCAGTTGAAAAAAGGGATTATGAGATTGCATCCCTCAAGAATCATATCGAAAGTCGTGACGCAGCTGAATCAAGTCATACACTCACAATCAAGAATAATGACAAAGGGAAAAAGATTTTGCAAGACAGTCAGCCCCAAGATTCAACTTCAAACTCCATCAAAGCTCCATATTAA MASKENASKASSDIVRRSITHNRSKEIQLEEQPTFEITRNIWERISKNPKAGVVIKENSTLDRHTSASEQSSEEASHPNVMSVMMADVGTSEEKMVELAKKVNMLLKPVEKRDYEIASLKNHIESRDAAESSHTLTIKNNDKGKKILQDSQPQDSTSNSIKAPY
BLAST of Cla010959 vs. TrEMBL
Match: E5GBB0_CUCME (Ty3-gypsy retrotransposon protein OS=Cucumis melo subsp. melo PE=4 SV=1) HSP 1 Score: 161.4 bits (407), Expect = 9.4e-37 Identity = 89/164 (54.27%), Postives = 115/164 (70.12%), Query Frame = 1
BLAST of Cla010959 vs. TrEMBL
Match: E5GCP6_CUCME (Ty3-gypsy retrotransposon protein OS=Cucumis melo subsp. melo PE=4 SV=1) HSP 1 Score: 108.2 bits (269), Expect = 9.5e-21 Identity = 66/183 (36.07%), Postives = 110/183 (60.11%), Query Frame = 1
BLAST of Cla010959 vs. TrEMBL
Match: E5GB67_CUCME (Retrotransposon gag protein OS=Cucumis melo subsp. melo PE=4 SV=1) HSP 1 Score: 92.4 bits (228), Expect = 5.4e-16 Identity = 54/135 (40.00%), Postives = 84/135 (62.22%), Query Frame = 1
BLAST of Cla010959 vs. TrEMBL
Match: E5GCM2_CUCME (Putative uncharacterized protein OS=Cucumis melo subsp. melo PE=4 SV=1) HSP 1 Score: 81.6 bits (200), Expect = 9.5e-13 Identity = 50/121 (41.32%), Postives = 72/121 (59.50%), Query Frame = 1
BLAST of Cla010959 vs. TrEMBL
Match: E5GCE3_CUCME (Putative uncharacterized protein OS=Cucumis melo subsp. melo PE=4 SV=1) HSP 1 Score: 81.6 bits (200), Expect = 9.5e-13 Identity = 49/132 (37.12%), Postives = 83/132 (62.88%), Query Frame = 1
BLAST of Cla010959 vs. NCBI nr
Match: gi|307135887|gb|ADN33752.1| (ty3-gypsy retrotransposon protein [Cucumis melo subsp. melo]) HSP 1 Score: 161.4 bits (407), Expect = 1.4e-36 Identity = 89/164 (54.27%), Postives = 115/164 (70.12%), Query Frame = 1
BLAST of Cla010959 vs. NCBI nr
Match: gi|307136441|gb|ADN34247.1| (ty3-gypsy retrotransposon protein [Cucumis melo subsp. melo]) HSP 1 Score: 108.2 bits (269), Expect = 1.4e-20 Identity = 66/183 (36.07%), Postives = 110/183 (60.11%), Query Frame = 1
BLAST of Cla010959 vs. NCBI nr
Match: gi|307135838|gb|ADN33709.1| (retrotransposon gag protein [Cucumis melo subsp. melo]) HSP 1 Score: 92.4 bits (228), Expect = 7.7e-16 Identity = 54/135 (40.00%), Postives = 84/135 (62.22%), Query Frame = 1
BLAST of Cla010959 vs. NCBI nr
Match: gi|659074577|ref|XP_008437679.1| (PREDICTED: uncharacterized protein LOC103483019 [Cucumis melo]) HSP 1 Score: 82.0 bits (201), Expect = 1.0e-12 Identity = 40/52 (76.92%), Postives = 47/52 (90.38%), Query Frame = 1
BLAST of Cla010959 vs. NCBI nr
Match: gi|307136413|gb|ADN34221.1| (hypothetical protein [Cucumis melo subsp. melo]) HSP 1 Score: 81.6 bits (200), Expect = 1.4e-12 Identity = 50/121 (41.32%), Postives = 72/121 (59.50%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
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