Cla007132.1 (mRNA) Watermelon (97103) v1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGATTGTTGGAGTTGGTGGAGGTGGCCGCTATCAGAGGTCGCTGGAGTTGGCTGTTGACGGTGGTGGTCGGATATGGCCGAAGTTGGCCACCACTGATGGTCTCGTTGGAGTGACAACGAAGGCATTGGTGGTGATGAGGGCTAGTGCACTGTTGGTGAAACATGGCATAAAATATCAGTGACATACAAAATTGGCCTCCCAAACATTCAGTTGAGTTTATATCTCAACTCATATCGACTCATATCCTCACCCCAAACATCCCTTGAGGGTGTTTGGGCCCCTAACTACAAGTGGGTGGAGTAGGCTGTTATAGTCCATATTTGGGGCTCTAATTATAATAGTTGATTTTTCCAACTATTATAACTTACAATTAAAATTAACTAGAGTGTTACTATTCCAAATCCGTTTTTGCAATGTTTACTATTTTCTACTCATCGTCTCTTTCCGTCTTTGCTACAATATTTACTACTTGCACAGATTAGAATAGTCTACATCCTAAACACAAACTATTATAGTCTACAGACTATAATAACTAACTCAATGCATTAAATACGCCCTATTTTACTATATTTTAGAATTCAAGGCTATTTATTTATTATTATTTTTTTAATGAGATTTTTAGGATTCAAGGGTTGAAATTTCATTTTAAAATTATGGGATCAGATGGAAATTTTCATGAGAGCTCAAGAGTATTAGGGATTTTGCAAAATGGAACCTTTTTGTTTATTTATTTATTTTAAACCATCTAATAAATAAGCTATAAGTGTACAATATTAGGCGTACATCTTTTCTAGACTTCAAATCTGAACAACTTATCCTAATGGTTTCAGATTATTTTAATTGCAGTATCCGGCAGAAACGCATGTGAGATCAGTATGTTGCACCAAGAAGATGCTGGTTTGAATGTGGAAATGGCAAAACTTGCGTTTGCAAAGGGCATATGGAGCTTTGTCTGTAAAATGGATAAAGCATTACGCAAATACGCTCTAATCAACCGCCCTCCATCAAGTTCACTTGTCACCGCAATTACTCTGATTAAGAAGGTTAAAAATGCTTACTCTTTACTTTATTGATACTAATTATACAATTTGTTCAAGATTAATTTTGTCACTTTATTGATTATCCAAGTGTATGTTGTATGTACTTAATTGTTTTATGGAGTGTTCTTATACTCACGCTTCTTACTGTTGTGGCAGAGAACACACTTCGTTAGTTTGCTTCGGGCAGTGTTTAGTGTCCTGTTTGTAGGCTGAGCTTGGATTTGTAGAAATTTGTCGTAAAGGGAATTACATTGCAAACATGTTATAGAGTTAGGTCACTTTGAACCGAAAAAAATATGGTAGAGTTTTTAATGTATAAGCGACCACAGTACATACATGTTCCTCTTATTGGTGTTTTCTTCCCATGGTGTCCTCTCCAAGATTTGGTTCAAAAGAAATCAACAAAAATTTTCAGAATCCTGCACAAACTCCTTTTGCTCGCTTCGACTTGGGCTCGTCCAAGGACTTCTAATTAGTGGTGTTCTCTTTTCAAGACTTGTTTTCAATTCAGGATATTCATTAATCCCTTTTAAGCTTCTTAAGGCTTTGTTTGTTTCCGGTTAGGCTCTTGTATGTGCTAGATATTCCTCTTATAGCTCGCTTTTGATGGATATGACTGACACATTTTCGTACATAAAGGTTCCAGATGGATTTGAGGACATGGATGGCATTATCTCTAAAGCAAACATTGTAGAAACCGAGTCTCCTGGACAAGTTTCTTCAGAAGAGAGAAAACTCTCGAGGGCATCAAAAAAGCTTGTGGCCAATGGTTTGCTTGTAATTGGTGGTATGATCTGCCTGTCGCGGTGTCACTCTAGTCTTGGTGCCAAAGTTGTTATGGCATATATTCTTACAAAGCTAAGCAAGAGAGCTGATGCACCAGGAGGCCAATTGGCAAGTAAAGAGCCTTAA ATGATTGTTGGAGTTGGTGGAGGTGGCCGCTATCAGAGGTCGCTGGAGTTGGCTGTTGACGGTGGTGGTCGGATATGGCCGAAGTTGGCCACCACTGATGGTCTCGTTGGAGTGACAACGAAGGCATTGGTGGTGATGAGGGCTAGTGCACTGTTGGTGAAACATGGCATAAAATATCAAAACGCATGTGAGATCAGTATGTTGCACCAAGAAGATGCTGGTTTGAATGTGGAAATGGCAAAACTTGCGTTTGCAAAGGGCATATGGAGCTTTGTCTGTAAAATGGATAAAGCATTACGCAAATACGCTCTAATCAACCGCCCTCCATCAAGTTCACTTGTCACCGCAATTACTCTGATTAAGAAGGTTCCAGATGGATTTGAGGACATGGATGGCATTATCTCTAAAGCAAACATTGTAGAAACCGAGTCTCCTGGACAAGTTTCTTCAGAAGAGAGAAAACTCTCGAGGGCATCAAAAAAGCTTGTGGCCAATGGTTTGCTTGTAATTGGTGGTATGATCTGCCTGTCGCGGTGTCACTCTAGTCTTGGTGCCAAAGTTGTTATGGCATATATTCTTACAAAGCTAAGCAAGAGAGCTGATGCACCAGGAGGCCAATTGGCAAGTAAAGAGCCTTAA ATGATTGTTGGAGTTGGTGGAGGTGGCCGCTATCAGAGGTCGCTGGAGTTGGCTGTTGACGGTGGTGGTCGGATATGGCCGAAGTTGGCCACCACTGATGGTCTCGTTGGAGTGACAACGAAGGCATTGGTGGTGATGAGGGCTAGTGCACTGTTGGTGAAACATGGCATAAAATATCAAAACGCATGTGAGATCAGTATGTTGCACCAAGAAGATGCTGGTTTGAATGTGGAAATGGCAAAACTTGCGTTTGCAAAGGGCATATGGAGCTTTGTCTGTAAAATGGATAAAGCATTACGCAAATACGCTCTAATCAACCGCCCTCCATCAAGTTCACTTGTCACCGCAATTACTCTGATTAAGAAGGTTCCAGATGGATTTGAGGACATGGATGGCATTATCTCTAAAGCAAACATTGTAGAAACCGAGTCTCCTGGACAAGTTTCTTCAGAAGAGAGAAAACTCTCGAGGGCATCAAAAAAGCTTGTGGCCAATGGTTTGCTTGTAATTGGTGGTATGATCTGCCTGTCGCGGTGTCACTCTAGTCTTGGTGCCAAAGTTGTTATGGCATATATTCTTACAAAGCTAAGCAAGAGAGCTGATGCACCAGGAGGCCAATTGGCAAGTAAAGAGCCTTAA MIVGVGGGGRYQRSLELAVDGGGRIWPKLATTDGLVGVTTKALVVMRASALLVKHGIKYQNACEISMLHQEDAGLNVEMAKLAFAKGIWSFVCKMDKALRKYALINRPPSSSLVTAITLIKKVPDGFEDMDGIISKANIVETESPGQVSSEERKLSRASKKLVANGLLVIGGMICLSRCHSSLGAKVVMAYILTKLSKRADAPGGQLASKEP
BLAST of Cla007132 vs. TrEMBL
Match: A0A0A0LCC1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G257060 PE=4 SV=1) HSP 1 Score: 256.9 bits (655), Expect = 2.1e-65 Identity = 131/152 (86.18%), Postives = 142/152 (93.42%), Query Frame = 1
BLAST of Cla007132 vs. TrEMBL
Match: V4SMW0_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10028538mg PE=4 SV=1) HSP 1 Score: 169.9 bits (429), Expect = 3.4e-39 Identity = 88/148 (59.46%), Postives = 112/148 (75.68%), Query Frame = 1
BLAST of Cla007132 vs. TrEMBL
Match: V4SHV5_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10028538mg PE=4 SV=1) HSP 1 Score: 169.9 bits (429), Expect = 3.4e-39 Identity = 88/148 (59.46%), Postives = 112/148 (75.68%), Query Frame = 1
BLAST of Cla007132 vs. TrEMBL
Match: B9RHS6_RICCO (Phosphatidylcholine transfer protein, putative OS=Ricinus communis GN=RCOM_1573300 PE=4 SV=1) HSP 1 Score: 168.7 bits (426), Expect = 7.6e-39 Identity = 92/151 (60.93%), Postives = 112/151 (74.17%), Query Frame = 1
BLAST of Cla007132 vs. TrEMBL
Match: A0A061G8R2_THECC (Polyketide cyclase/dehydrase and lipid transport superfamily protein isoform 1 OS=Theobroma cacao GN=TCM_027668 PE=4 SV=1) HSP 1 Score: 167.2 bits (422), Expect = 2.2e-38 Identity = 92/146 (63.01%), Postives = 108/146 (73.97%), Query Frame = 1
BLAST of Cla007132 vs. NCBI nr
Match: gi|659123199|ref|XP_008461544.1| (PREDICTED: phosphatidylcholine transfer protein-like isoform X2 [Cucumis melo]) HSP 1 Score: 257.7 bits (657), Expect = 1.8e-65 Identity = 134/152 (88.16%), Postives = 140/152 (92.11%), Query Frame = 1
BLAST of Cla007132 vs. NCBI nr
Match: gi|659123201|ref|XP_008461545.1| (PREDICTED: phosphatidylcholine transfer protein-like isoform X3 [Cucumis melo]) HSP 1 Score: 257.7 bits (657), Expect = 1.8e-65 Identity = 134/152 (88.16%), Postives = 140/152 (92.11%), Query Frame = 1
BLAST of Cla007132 vs. NCBI nr
Match: gi|659123197|ref|XP_008461543.1| (PREDICTED: phosphatidylcholine transfer protein-like isoform X1 [Cucumis melo]) HSP 1 Score: 257.7 bits (657), Expect = 1.8e-65 Identity = 134/152 (88.16%), Postives = 140/152 (92.11%), Query Frame = 1
BLAST of Cla007132 vs. NCBI nr
Match: gi|449455774|ref|XP_004145626.1| (PREDICTED: uncharacterized protein LOC101203824 isoform X1 [Cucumis sativus]) HSP 1 Score: 256.9 bits (655), Expect = 3.1e-65 Identity = 131/152 (86.18%), Postives = 142/152 (93.42%), Query Frame = 1
BLAST of Cla007132 vs. NCBI nr
Match: gi|778680565|ref|XP_011651346.1| (PREDICTED: phosphatidylcholine transfer protein isoform X2 [Cucumis sativus]) HSP 1 Score: 256.9 bits (655), Expect = 3.1e-65 Identity = 131/152 (86.18%), Postives = 142/152 (93.42%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
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