Cla006577.1 (mRNA) Watermelon (97103) v1

Overview
NameCla006577
TypemRNA
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionFasciclin domain-containing protein (AHRD V1 ***- B9HHL5_POPTR); contains Interpro domain(s) IPR000782 FAS1 domain
LocationChr11 : 1630735 .. 1631331 (+)
Sequence length597
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGAGGACCTTCGTTTTAAAGAGCCCAATTGCCTTTGTTTTTATGATTCTGTCTCTTTGCTGCATACTTATTGTACTCATCACAACACTAAGACTTCCAGAGCTAACTGTTGGAGTTAAGGCTGTAGCCAGTGATAAGGTTTCAGTGATCAGAAAGATACCCAAAGATGATAAGTTGGGCAAGTTTGGAGAGATGATGATCAAAATGTTGCCTAAGGATCTTGCTTTTACTCTGTTTATTCCTTCGGAGAATGCTTTTGAGCGCGAATTGAATTTACGAGTGAACGAAAGTTTCACAAGTACTGAGAAGTTGGACAACACATATGCTGTGATTTCGAGAATATTAGGATTCTCTGCGGTTCCTCGAACTATTTTTTCGACGTTAGTAGATTACGGGAATGAAATTTCATATGATGCTGTTTCTGGATTCACATTGCACATTTCCAAGGACAGAGATGGGATGCTGATTGTTAACGGGGTGAGGTCTGAAATGGTGGATATAAAGAAAAAGGATGTTCTTGTGCATATAATGGATGGTGTTATAATGGATGCTGCATTTGAGCAATCAGTAAAACCTGATGACAGTGAAGATTGA

mRNA sequence

ATGAAGAGGACCTTCGTTTTAAAGAGCCCAATTGCCTTTGTTTTTATGATTCTGTCTCTTTGCTGCATACTTATTGTACTCATCACAACACTAAGACTTCCAGAGCTAACTGTTGGAGTTAAGGCTGTAGCCAGTGATAAGGTTTCAGTGATCAGAAAGATACCCAAAGATGATAAGTTGGGCAAGTTTGGAGAGATGATGATCAAAATGTTGCCTAAGGATCTTGCTTTTACTCTGTTTATTCCTTCGGAGAATGCTTTTGAGCGCGAATTGAATTTACGAGTGAACGAAAGTTTCACAAGTACTGAGAAGTTGGACAACACATATGCTGTGATTTCGAGAATATTAGGATTCTCTGCGGTTCCTCGAACTATTTTTTCGACGTTAGTAGATTACGGGAATGAAATTTCATATGATGCTGTTTCTGGATTCACATTGCACATTTCCAAGGACAGAGATGGGATGCTGATTGTTAACGGGGTGAGGTCTGAAATGGTGGATATAAAGAAAAAGGATGTTCTTGTGCATATAATGGATGGTGTTATAATGGATGCTGCATTTGAGCAATCAGTAAAACCTGATGACAGTGAAGATTGA

Coding sequence (CDS)

ATGAAGAGGACCTTCGTTTTAAAGAGCCCAATTGCCTTTGTTTTTATGATTCTGTCTCTTTGCTGCATACTTATTGTACTCATCACAACACTAAGACTTCCAGAGCTAACTGTTGGAGTTAAGGCTGTAGCCAGTGATAAGGTTTCAGTGATCAGAAAGATACCCAAAGATGATAAGTTGGGCAAGTTTGGAGAGATGATGATCAAAATGTTGCCTAAGGATCTTGCTTTTACTCTGTTTATTCCTTCGGAGAATGCTTTTGAGCGCGAATTGAATTTACGAGTGAACGAAAGTTTCACAAGTACTGAGAAGTTGGACAACACATATGCTGTGATTTCGAGAATATTAGGATTCTCTGCGGTTCCTCGAACTATTTTTTCGACGTTAGTAGATTACGGGAATGAAATTTCATATGATGCTGTTTCTGGATTCACATTGCACATTTCCAAGGACAGAGATGGGATGCTGATTGTTAACGGGGTGAGGTCTGAAATGGTGGATATAAAGAAAAAGGATGTTCTTGTGCATATAATGGATGGTGTTATAATGGATGCTGCATTTGAGCAATCAGTAAAACCTGATGACAGTGAAGATTGA

Protein sequence

MKRTFVLKSPIAFVFMILSLCCILIVLITTLRLPELTVGVKAVASDKVSVIRKIPKDDKLGKFGEMMIKMLPKDLAFTLFIPSENAFERELNLRVNESFTSTEKLDNTYAVISRILGFSAVPRTIFSTLVDYGNEISYDAVSGFTLHISKDRDGMLIVNGVRSEMVDIKKKDVLVHIMDGVIMDAAFEQSVKPDDSED
Homology
[Close]
BLAST of Cla006577 vs. TrEMBL
Match: A0A0A0K8H5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G010005 PE=4 SV=1)

HSP 1 Score: 341.3 bits (874), Expect = 8.0e-91
Identity = 171/198 (86.36%), Postives = 192/198 (96.97%), Query Frame = 1 

Query: 1   MKRTFVLKSPIAFVFMILSLCCILIVLITTLRLPELTVGVKAVASDKVSVIRKIPKDDKL 60
           MKR+F+LK+PIAFVFMILSLCC+LIVLITTLRLPELTVGVKA A DKVS+IRK+ KDD+L
Sbjct: 1   MKRSFILKNPIAFVFMILSLCCVLIVLITTLRLPELTVGVKAGARDKVSLIRKVLKDDEL 60

Query: 61  GKFGEMMIKMLPKDLAFTLFIPSENAFERELNLRVNESFTSTEKLDNTYAVISRILGFSA 120
           GKFGEMMI+MLP+DLAFT+FIPSE AFEREL+LRVNESFTSTEK+D+TYAVISRILGFSA
Sbjct: 61  GKFGEMMIEMLPEDLAFTVFIPSEKAFERELSLRVNESFTSTEKMDDTYAVISRILGFSA 120

Query: 121 VPRTIFSTLVDYGNEISYDAVSGFTLHISKDRDGMLIVNGVRSEMVDIKKKDVLVHIMDG 180
           VPRTI+STLVDYG+EI YDAVSGFTL+ISKDR+G L+VNGVRSEMVD+KKKDVLVHIMDG
Sbjct: 121 VPRTIYSTLVDYGSEIIYDAVSGFTLNISKDRNGRLVVNGVRSEMVDLKKKDVLVHIMDG 180

Query: 181 VIMDAAFEQSVKPDDSED 199
           VIMDA+FEQSVKPDD+ED
Sbjct: 181 VIMDASFEQSVKPDDNED 198

[Close]
BLAST of Cla006577 vs. TrEMBL
Match: B9SLJ2_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0591780 PE=4 SV=1)

HSP 1 Score: 237.7 bits (605), Expect = 1.3e-59
Identity = 113/191 (59.16%), Postives = 156/191 (81.68%), Query Frame = 1 

Query: 8   KSPIAFVFMILSLCCILIVLITTLRLPELTVGVKAVASDKVSVIRKIPKDDKLGKFGEMM 67
           K+PIAFV +++S+CC L+++I+ LRLPE+TVG K +   +    RKI KD+ +GKFG++M
Sbjct: 8   KNPIAFVGVVVSVCCFLVIMISVLRLPEVTVGNKVIRPYRTFKSRKISKDEGIGKFGDLM 67

Query: 68  IKMLPKDLAFTLFIPSENAFERELNLRVNESFTSTEKLDNTYAVISRILGFSAVPRTIFS 127
           I+MLP+DLAFT+F+PSE AFER+L LR N+S  + EK ++TYAV+SRILGFSA+PRT+ S
Sbjct: 68  IEMLPEDLAFTVFVPSEKAFERDLRLRANDSLLA-EKRNDTYAVVSRILGFSAIPRTLLS 127

Query: 128 TLVDYGNEISYDAVSGFTLHISKDRDGMLIVNGVRSEMVDIKKKDVLVHIMDGVIMDAAF 187
             V    E+ YD++SGF L++SKD DGMLIVN +RSE VD+++++V+VH+MDGVIMDA F
Sbjct: 128 AAVYSNKELFYDSLSGFPLYVSKDADGMLIVNRIRSERVDVRRREVIVHVMDGVIMDAEF 187

Query: 188 EQSVKPDDSED 199
           EQSV+PD +ED
Sbjct: 188 EQSVQPDYTED 197

[Close]
BLAST of Cla006577 vs. TrEMBL
Match: U5G276_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0010s19970g PE=4 SV=1)

HSP 1 Score: 228.8 bits (582), Expect = 5.8e-57
Identity = 107/198 (54.04%), Postives = 161/198 (81.31%), Query Frame = 1 

Query: 1   MKRTFVLKSPIAFVFMILSLCCILIVLITTLRLPELTVGVKAVASDKVSVIRKIPKDDKL 60
           M+R   +K+ IAFV +++S+CC+L+++++ L+LPE+++  +    ++   IRK+ KD+++
Sbjct: 1   MRRGCFVKNLIAFVGVVISVCCLLVIMVSVLQLPEVSLRNEVTGPNRTIRIRKVSKDEEI 60

Query: 61  GKFGEMMIKMLPKDLAFTLFIPSENAFERELNLRVNESFTSTEKLDNTYAVISRILGFSA 120
           G+FGEMMI+MLP+DLAFT+F+PSE AF+R+L LR+N+S  + EK ++TYAV+SRILGFSA
Sbjct: 61  GRFGEMMIEMLPEDLAFTVFVPSEKAFQRDLRLRLNDSLVA-EKRNDTYAVVSRILGFSA 120

Query: 121 VPRTIFSTLVDYGNEISYDAVSGFTLHISKDRDGMLIVNGVRSEMVDIKKKDVLVHIMDG 180
           VP+T+ S  V    E+ YD++SGFTL+ISKD DGML+VN +RSE VD+++  ++VHIMDG
Sbjct: 121 VPQTLSSATVSSSKEVFYDSLSGFTLYISKDLDGMLVVNRIRSEKVDLRRGQIVVHIMDG 180

Query: 181 VIMDAAFEQSVKPDDSED 199
           VIMDA FEQ+V+PD +E+
Sbjct: 181 VIMDAEFEQAVQPDYTEE 197

[Close]
BLAST of Cla006577 vs. TrEMBL
Match: V7BAA1_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_008G225800g PE=4 SV=1)

HSP 1 Score: 216.9 bits (551), Expect = 2.3e-53
Identity = 108/199 (54.27%), Postives = 151/199 (75.88%), Query Frame = 1 

Query: 1   MKRTFVLKSPIAFVFMILSLCCILIVLITTLRLPELTVGVKAVASDKVSVIRKI-PKDDK 60
           M+R  VLK  IA+V M++ +CC  IV +T L+LP+      A+    ++  RK+ PKD  
Sbjct: 1   MRRRQVLKHSIAYVSMLVCVCCFFIVTVTVLKLPDAPTKESAMGFYPITRSRKVSPKDAN 60

Query: 61  LGKFGEMMIKMLPKDLAFTLFIPSENAFERELNLRVNESFTSTEKLDNTYAVISRILGFS 120
           LGKFGEMMI MLP+DLAFT+F+PSE AF+R+L L VN++  S ++ ++TYA+++RILGFS
Sbjct: 61  LGKFGEMMIDMLPQDLAFTVFVPSEEAFKRDLRLSVNDALKS-DRFNDTYAILTRILGFS 120

Query: 121 AVPRTIFSTLVDYGNEISYDAVSGFTLHISKDRDGMLIVNGVRSEMVDIKKKDVLVHIMD 180
           AVPR + S  V  G  ++YD++SGF+L+ISKD DGML+VN +RSE+VD++KK+++VH+MD
Sbjct: 121 AVPRALSSANVKLGELVNYDSLSGFSLYISKDIDGMLVVNRIRSEIVDVRKKEIVVHLMD 180

Query: 181 GVIMDAAFEQSVKPDDSED 199
           GVIMDA FEQSV  D+  D
Sbjct: 181 GVIMDAEFEQSVLSDNDTD 198

[Close]
BLAST of Cla006577 vs. TrEMBL
Match: A0A059A5Q1_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_K02662 PE=4 SV=1)

HSP 1 Score: 216.1 bits (549), Expect = 3.9e-53
Identity = 107/194 (55.15%), Postives = 148/194 (76.29%), Query Frame = 1 

Query: 1   MKRTFVLKSPIAFVFMILSLCCILIVLITTLRLPELTVGVKAVASDKVSVIRKIPKDDKL 60
           M+R    K+ IAFV  ++SLCC L+++++TLRLPE++ G  AV S + +   K  ++ +L
Sbjct: 1   MRRGRFAKNSIAFVCTVVSLCCFLVLILSTLRLPEVSSGNDAVGSHRTTKAGKFSENRRL 60

Query: 61  GKFGEMMIKMLPKDLAFTLFIPSENAFERELNLRVNESFTSTEKLDNTYAVISRILGFSA 120
           G FGEMM++MLP+DLAFT+F+PSE AF R+L L   ESF + E ++NTYAV+SR+LGFSA
Sbjct: 61  GTFGEMMVEMLPQDLAFTVFVPSEKAFGRDLQLNATESF-AAENINNTYAVVSRVLGFSA 120

Query: 121 VPRTIFSTLVDYGNEISYDAVSGFTLHISKDRDGMLIVNGVRSEMVDIKKKDVLVHIMDG 180
           VPR + S  V  G EISYD++SG+ L+ISK  +G +IVNGV SE +D +K +++VHIMDG
Sbjct: 121 VPRVLTSETVPVGKEISYDSLSGYALYISKAVNGRIIVNGVESESLDTRKGEIVVHIMDG 180

Query: 181 VIMDAAFEQSVKPD 195
           VIMDA F+QSV+PD
Sbjct: 181 VIMDADFKQSVQPD 193

[Close]
BLAST of Cla006577 vs. NCBI nr
Match: gi|449441324|ref|XP_004138432.1| (PREDICTED: uncharacterized protein LOC101206202 [Cucumis sativus])

HSP 1 Score: 341.3 bits (874), Expect = 1.2e-90
Identity = 171/198 (86.36%), Postives = 192/198 (96.97%), Query Frame = 1 

Query: 1   MKRTFVLKSPIAFVFMILSLCCILIVLITTLRLPELTVGVKAVASDKVSVIRKIPKDDKL 60
           MKR+F+LK+PIAFVFMILSLCC+LIVLITTLRLPELTVGVKA A DKVS+IRK+ KDD+L
Sbjct: 1   MKRSFILKNPIAFVFMILSLCCVLIVLITTLRLPELTVGVKAGARDKVSLIRKVLKDDEL 60

Query: 61  GKFGEMMIKMLPKDLAFTLFIPSENAFERELNLRVNESFTSTEKLDNTYAVISRILGFSA 120
           GKFGEMMI+MLP+DLAFT+FIPSE AFEREL+LRVNESFTSTEK+D+TYAVISRILGFSA
Sbjct: 61  GKFGEMMIEMLPEDLAFTVFIPSEKAFERELSLRVNESFTSTEKMDDTYAVISRILGFSA 120

Query: 121 VPRTIFSTLVDYGNEISYDAVSGFTLHISKDRDGMLIVNGVRSEMVDIKKKDVLVHIMDG 180
           VPRTI+STLVDYG+EI YDAVSGFTL+ISKDR+G L+VNGVRSEMVD+KKKDVLVHIMDG
Sbjct: 121 VPRTIYSTLVDYGSEIIYDAVSGFTLNISKDRNGRLVVNGVRSEMVDLKKKDVLVHIMDG 180

Query: 181 VIMDAAFEQSVKPDDSED 199
           VIMDA+FEQSVKPDD+ED
Sbjct: 181 VIMDASFEQSVKPDDNED 198

[Close]
BLAST of Cla006577 vs. NCBI nr
Match: gi|659081648|ref|XP_008441441.1| (PREDICTED: uncharacterized protein LOC103485559 [Cucumis melo])

HSP 1 Score: 339.3 bits (869), Expect = 4.4e-90
Identity = 171/198 (86.36%), Postives = 189/198 (95.45%), Query Frame = 1 

Query: 1   MKRTFVLKSPIAFVFMILSLCCILIVLITTLRLPELTVGVKAVASDKVSVIRKIPKDDKL 60
           MKR+F+LK+PIAFVFMILSLCC+LIVLITTLRLPELTVG K  A DKVS+IRK+ KD KL
Sbjct: 1   MKRSFILKNPIAFVFMILSLCCVLIVLITTLRLPELTVGFKTGARDKVSLIRKVLKDGKL 60

Query: 61  GKFGEMMIKMLPKDLAFTLFIPSENAFERELNLRVNESFTSTEKLDNTYAVISRILGFSA 120
           GKFGEMMI+MLP+DLAFT+FIPSE AFEREL+LRVNESFTSTEK+D+TYAVISRILGFSA
Sbjct: 61  GKFGEMMIEMLPEDLAFTVFIPSEKAFERELSLRVNESFTSTEKMDDTYAVISRILGFSA 120

Query: 121 VPRTIFSTLVDYGNEISYDAVSGFTLHISKDRDGMLIVNGVRSEMVDIKKKDVLVHIMDG 180
           VPRTI+STLVDYG+EISYDAVSGFTL+ISKDRDG L+VNGVRSEMVD+KKK VLVHIMDG
Sbjct: 121 VPRTIYSTLVDYGSEISYDAVSGFTLNISKDRDGRLVVNGVRSEMVDLKKKGVLVHIMDG 180

Query: 181 VIMDAAFEQSVKPDDSED 199
           VIMDAAFEQSVKPDD+ED
Sbjct: 181 VIMDAAFEQSVKPDDNED 198

[Close]
BLAST of Cla006577 vs. NCBI nr
Match: gi|802546967|ref|XP_012087833.1| (PREDICTED: uncharacterized protein LOC105646572 isoform X1 [Jatropha curcas])

HSP 1 Score: 243.8 bits (621), Expect = 2.5e-61
Identity = 114/198 (57.58%), Postives = 165/198 (83.33%), Query Frame = 1 

Query: 1   MKRTFVLKSPIAFVFMILSLCCILIVLITTLRLPELTVGVKAVASDKVSVIRKIPKDDKL 60
           M+R ++L   IAFV M++S+CC+++++I+ LRLPE++VG K + S +    RK+ KD+ +
Sbjct: 1   MRRGYLLNYSIAFVGMVVSVCCLIVIMISVLRLPEISVGNKLMGSYRTIKSRKVSKDEGI 60

Query: 61  GKFGEMMIKMLPKDLAFTLFIPSENAFERELNLRVNESFTSTEKLDNTYAVISRILGFSA 120
           G+FGEMMI+MLP+DLAFT+FIPSE AFER+L LRVN+S  + +K ++TYA++SRILGFSA
Sbjct: 61  GRFGEMMIEMLPEDLAFTVFIPSERAFERDLKLRVNDSLVA-DKRNDTYAIVSRILGFSA 120

Query: 121 VPRTIFSTLVDYGNEISYDAVSGFTLHISKDRDGMLIVNGVRSEMVDIKKKDVLVHIMDG 180
           +PRT+ + +V    ++SYD++SGFTL+I+KD DGMLIVN +RSE VDI++++++VHIMDG
Sbjct: 121 IPRTLSAAMVSSNKDVSYDSISGFTLYITKDVDGMLIVNRIRSERVDIRRREIIVHIMDG 180

Query: 181 VIMDAAFEQSVKPDDSED 199
           VIMDA FEQSV+PD +E+
Sbjct: 181 VIMDAEFEQSVQPDYAEE 197

[Close]
BLAST of Cla006577 vs. NCBI nr
Match: gi|255571837|ref|XP_002526861.1| (PREDICTED: uncharacterized protein LOC8270435 [Ricinus communis])

HSP 1 Score: 237.7 bits (605), Expect = 1.8e-59
Identity = 113/191 (59.16%), Postives = 156/191 (81.68%), Query Frame = 1 

Query: 8   KSPIAFVFMILSLCCILIVLITTLRLPELTVGVKAVASDKVSVIRKIPKDDKLGKFGEMM 67
           K+PIAFV +++S+CC L+++I+ LRLPE+TVG K +   +    RKI KD+ +GKFG++M
Sbjct: 8   KNPIAFVGVVVSVCCFLVIMISVLRLPEVTVGNKVIRPYRTFKSRKISKDEGIGKFGDLM 67

Query: 68  IKMLPKDLAFTLFIPSENAFERELNLRVNESFTSTEKLDNTYAVISRILGFSAVPRTIFS 127
           I+MLP+DLAFT+F+PSE AFER+L LR N+S  + EK ++TYAV+SRILGFSA+PRT+ S
Sbjct: 68  IEMLPEDLAFTVFVPSEKAFERDLRLRANDSLLA-EKRNDTYAVVSRILGFSAIPRTLLS 127

Query: 128 TLVDYGNEISYDAVSGFTLHISKDRDGMLIVNGVRSEMVDIKKKDVLVHIMDGVIMDAAF 187
             V    E+ YD++SGF L++SKD DGMLIVN +RSE VD+++++V+VH+MDGVIMDA F
Sbjct: 128 AAVYSNKELFYDSLSGFPLYVSKDADGMLIVNRIRSERVDVRRREVIVHVMDGVIMDAEF 187

Query: 188 EQSVKPDDSED 199
           EQSV+PD +ED
Sbjct: 188 EQSVQPDYTED 197

[Close]
BLAST of Cla006577 vs. NCBI nr
Match: gi|802546969|ref|XP_012087840.1| (PREDICTED: uncharacterized protein LOC105646572 isoform X2 [Jatropha curcas])

HSP 1 Score: 232.3 bits (591), Expect = 7.5e-58
Identity = 107/183 (58.47%), Postives = 155/183 (84.70%), Query Frame = 1 

Query: 16  MILSLCCILIVLITTLRLPELTVGVKAVASDKVSVIRKIPKDDKLGKFGEMMIKMLPKDL 75
           M++S+CC+++++I+ LRLPE++VG K + S +    RK+ KD+ +G+FGEMMI+MLP+DL
Sbjct: 1   MVVSVCCLIVIMISVLRLPEISVGNKLMGSYRTIKSRKVSKDEGIGRFGEMMIEMLPEDL 60

Query: 76  AFTLFIPSENAFERELNLRVNESFTSTEKLDNTYAVISRILGFSAVPRTIFSTLVDYGNE 135
           AFT+FIPSE AFER+L LRVN+S  + +K ++TYA++SRILGFSA+PRT+ + +V    +
Sbjct: 61  AFTVFIPSERAFERDLKLRVNDSLVA-DKRNDTYAIVSRILGFSAIPRTLSAAMVSSNKD 120

Query: 136 ISYDAVSGFTLHISKDRDGMLIVNGVRSEMVDIKKKDVLVHIMDGVIMDAAFEQSVKPDD 195
           +SYD++SGFTL+I+KD DGMLIVN +RSE VDI++++++VHIMDGVIMDA FEQSV+PD 
Sbjct: 121 VSYDSISGFTLYITKDVDGMLIVNRIRSERVDIRRREIIVHIMDGVIMDAEFEQSVQPDY 180

Query: 196 SED 199
           +E+
Sbjct: 181 AEE 182

The following BLAST results are available for this feature:
BLAST of Cla006577 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K8H5_CUCSA8.0e-9186.36Uncharacterized protein OS=Cucumis sativus GN=Csa_6G010005 PE=4 SV=1[more]
B9SLJ2_RICCO1.3e-5959.16Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0591780 PE=4 SV=1[more]
U5G276_POPTR5.8e-5754.04Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0010s19970g PE=4 SV=1[more]
V7BAA1_PHAVU2.3e-5354.27Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_008G225800g PE=4 SV=1[more]
A0A059A5Q1_EUCGR3.9e-5355.15Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_K02662 PE=4 SV=1[more]
BLAST of Cla006577 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449441324|ref|XP_004138432.1|1.2e-9086.36PREDICTED: uncharacterized protein LOC101206202 [Cucumis sativus][more]
gi|659081648|ref|XP_008441441.1|4.4e-9086.36PREDICTED: uncharacterized protein LOC103485559 [Cucumis melo][more]
gi|802546967|ref|XP_012087833.1|2.5e-6157.58PREDICTED: uncharacterized protein LOC105646572 isoform X1 [Jatropha curcas][more]
gi|255571837|ref|XP_002526861.1|1.8e-5959.16PREDICTED: uncharacterized protein LOC8270435 [Ricinus communis][more]
gi|802546969|ref|XP_012087840.1|7.5e-5858.47PREDICTED: uncharacterized protein LOC105646572 isoform X2 [Jatropha curcas][more]
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR000782FAS1_domain
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Cla006577Cla006577gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Cla006577Cla006577.1-proteinpolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cla006577.1.cds1Cla006577.1.cds1CDS


InterPro
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000782FAS1 domainGENE3DG3DSA:2.30.180.10coord: 67..183
score: 3.
IPR000782FAS1 domainPFAMPF02469Fasciclincoord: 69..183
score: 2.
IPR000782FAS1 domainPROFILEPS50213FAS1coord: 47..182
score: 14
IPR000782FAS1 domainunknownSSF82153FAS1 domaincoord: 69..183
score: 4.3
NoneNo IPR availablePANTHERPTHR37232FAMILY NOT NAMEDcoord: 1..198
score: 7.9
NoneNo IPR availablePANTHERPTHR37232:SF1SUBFAMILY NOT NAMEDcoord: 1..198
score: 7.9